F381090

General Info

Members Datasets Scaffolds Average Seq Length
276 234 208 256

Family's Representative Sequence

Representative Sequence 3300009177|Ga0105248_10011979|Ga0105248_100119792
Length 289
Sequence MFSATQMACAQIPAQVSAQAHTASIEETFSMKKHRVDLNSDMGEGFGSWTIGDGVDAEIMPLISSANIATGFHAGDPNIMARTVQLAKQAGVGIGAHPGFRDLVGFGRRNITETPQALVNDIVYQLGALREFARLNNVSVQHVKPHGALYMLAARDEGLSRLLVETLQTLDPALLLYCMEASVTYRVAREFGQPVIREFYADRDYDRSGSIVFTRRVGRLDPAQVAAKVVRACVEGRVATVDGVDIEIDFDSVCIHSDTPGALQLVEATRAALTSHEIRVEAPSHAPAR

Samples

Sample ID Description Type Environment
1 2501025501 Paraburkholderia silvatlantica PVA5 Isolate Unclassified
2 2501025502 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
3 2501025504 Paraburkholderia silvatlantica SRMrh-20 Isolate Unclassified
4 2510065053 Pseudomonas sp. MOIL14HWK12:I1 Isolate Rhizosphere
5 2510065055 Pseudomonas sp. MOIL14HWK12:I2 Isolate Rhizosphere
6 2510065058 Pseudomonas oleovorans MOIL14HWK12 Isolate Rhizosphere
7 2510917013 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
8 2510917014 Paraburkholderia silvatlantica SRMrh-20 Isolate Unclassified
9 2510917015 Paraburkholderia silvatlantica PVA5 Isolate Unclassified
10 2511231221 Azospirillum lipoferum 4B Isolate Rhizosphere
11 2515154189 Paraburkholderia nodosa DSM 21604 Isolate Unclassified
12 2519103095 Burkholderia sp. KJ006 Isolate Nodule
13 2554235132 Pseudomonas aeruginosa PGPR2 Isolate Unclassified
14 2582581311 Burkholderia sp. WP42 Isolate Rhizosphere
15 2599185239 Burkholderia sp. NFACC38-1 Isolate Rhizoplane
16 2600255067 Paraburkholderia kururiensis thiooxydans NBRC 107107 Isolate Unclassified
17 2600255256 Enterobacter sp. NFIX08 Isolate Rhizoplane
18 2600255257 Enterobacter sp. NFIX03 Isolate Rhizoplane
19 2600255310 Enterobacter sp. NFIX06 Isolate Rhizoplane
20 2600255311 Enterobacter sp. NFIX04 Isolate Rhizoplane
21 2602042046 Enterobacter sp. NFIX09 Isolate Rhizoplane
22 2606217733 Pseudomonas aeruginosa NFHH01 Isolate Rhizoplane
23 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
24 2706794495 Dickeya zeae ZJU1202 Isolate Unclassified
25 2721755523 Delftia sp. HK171 Isolate Unclassified
26 2738541307 Variovorax sp. GV008 Isolate Unclassified
27 2751185788 Curtobacterium pusillum AA3 Isolate Unclassified
28 2751185846 Paraburkholderia ribeironis STM 7296 Isolate Unclassified
29 2773857672 Pseudomonas sp. 1766 Isolate Unclassified
30 2791354903 Mangrovibacter phragmitis MP23 Isolate Unclassified
31 2808606384 Burkholderia sp. SJZ089 Isolate Rhizosphere
32 2808606390 Burkholderia sp. SJZ115 Isolate Rhizosphere
33 2808606391 Burkholderia sp. SJZ091 Isolate Rhizosphere
34 2811995292 Kosakonia oryzae Ola 51 Isolate Unclassified
35 2814123068 Kosakonia radicincitans GXGL-4A Isolate Rhizosphere
36 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
37 2816332253 Burkholderia vietnamiensis HI2297 Isolate Unclassified
38 2816332256 Burkholderia vietnamiensis MSMB608WGS Isolate Unclassified
39 2816332286 Burkholderia vietnamiensis HI2221 Isolate Rhizosphere
40 2838694306 Rhizobium leguminosarum SEMIA 421 Isolate Nodule
41 2839138175 Delftia acidovorans B15 Isolate Rhizosphere
42 2854601825 Dickeya dianthicola SS70 Isolate Stem Tuber
43 2858950400 Achromobacter sp. K91 Isolate Unclassified
44 2870068957 Burkholderia sp. JP2-270 Isolate Unclassified
45 2885198086 Variovorax sp. 679 Isolate Unclassified
46 2885211737 Variovorax sp. 553 Isolate Unclassified
47 2904541872 Variovorax sp. 1615 Isolate Rhizosphere
48 2904584206 Herbaspirillum sp. 1050 Isolate Unclassified
49 2904589729 Herbaspirillum sp. 1130 Isolate Unclassified
50 2917832318 Pseudomonas rhizoryzae RY24 Isolate Unclassified
51 2919042368 Curtobacterium sp. 320 Isolate Rhizosphere
52 2919125081 Pseudomonas psychrotolerans 1545 Isolate Rhizosphere
53 2919450847 Ancylobacter sp. 3268 Isolate Rhizosphere
54 2928104781 Curtobacterium sp. 1544 Isolate Rhizosphere
55 2929160207 Variovorax sp. R-72349 Hybrid assembly Isolate Unclassified
56 2939631187 Ottowia thiooxydans 2709 Isolate Rhizosphere
57 2974298342 Pseudomonas sp. SORGH_AS 211 Isolate Unclassified
58 2984499530 Pseudomonas sp. SORGH_AS199 Isolate Aerial Root
59 2984504281 Pseudomonas psychrotolerans SORGH_AS201 Isolate Aerial Root
60 2984551494 Curtobacterium sp. SORGH_AS776 Isolate Aerial Root
61 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
62 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
63 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
64 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
65 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
66 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
67 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
68 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
69 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
70 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
71 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
72 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
73 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
74 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
75 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
76 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
77 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
78 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
79 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
80 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
81 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
82 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
83 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
84 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
85 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
86 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
87 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
88 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
89 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
90 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
91 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
92 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
93 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
94 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
95 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
96 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
97 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
98 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
99 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
100 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
101 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
102 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
103 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
104 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
105 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
106 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
107 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
108 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
114 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
115 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
116 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
117 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
118 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
119 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
120 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
121 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
122 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
123 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
124 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
125 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
126 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
127 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
128 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
129 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
130 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
131 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
132 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
133 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
134 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
135 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
136 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
137 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
138 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
139 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
140 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
141 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
142 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
143 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
144 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
145 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
146 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
147 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
148 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
149 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
150 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
151 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
152 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
153 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
154 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
155 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
156 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
157 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
158 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
159 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
160 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
161 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
162 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
163 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
164 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
165 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
166 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
167 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
168 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
169 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
170 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
171 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
172 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
173 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
174 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
175 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
176 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
177 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
178 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
179 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
180 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
181 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
182 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
183 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
184 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
185 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
186 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
187 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
188 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
189 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
190 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
191 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
192 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
193 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
194 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
195 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
196 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
197 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
198 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
199 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
200 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
201 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
202 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
203 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
204 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
205 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
206 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
207 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
208 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
209 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
210 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
211 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
212 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
213 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
214 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
215 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
216 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
217 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
218 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
219 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
220 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
221 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
222 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
223 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
224 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
225 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
226 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
227 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
228 8001845381 Ancylobacter sonchi VKM B-3145 Isolate Unclassified
229 8016728285 Pseudomonas psychrotolerans SORGH_AS 227 Isolate Unclassified
230 8018845410 Burkholderia reimsis BE51 Isolate Rhizosphere
231 8020807995 Burkholderia sp. B10 Isolate Rhizosphere
232 8040167225 Burkholderia vietnamiensis RS1 Isolate Unclassified
233 8040173305 Burkholderia vietnamiensis BE10 Isolate Rhizosphere
234 8057529695 Bosea vestrisii A18/4-2 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 75.36
Metatranscriptomes 0
Isolates 24.64

Biome Distribution

Category Percentage (%)
Aerial Root 1.09
Bulb 0
Endosphere 11.23
Nodule 1.81
Rhizoplane 6.16
Rhizosphere 59.78
Stem 0
Stem Tuber 0.36
Unclassified 19.57

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25156J39149_1000276 3300002705 Bacteria 34960
2 JGI25151J46595_10006956 3300003187 Bacteria 5607
3 rootL2_10035881 3300003322 Bacteria 1262
4 Ga0055532_1000854 3300003758 Bacteria 10324
5 Ga0055532_1001852 3300003758 Bacteria 5182
6 Ga0055527_1001312 3300003760 Bacteria 5377
7 Ga0055535_1002398 3300003761 Bacteria 6666
8 Ga0055542_1002272 3300003762 Bacteria 6678
9 Ga0055529_1000778 3300003763 Bacteria 19884
10 Ga0055536_1002113 3300003781 Bacteria 11313
11 Ga0055540_1000291 3300003792 Bacteria 44881
12 Ga0055541_1006994 3300003841 Bacteria 1882
13 Ga0058692_1001488 3300003856 Bacteria 8596
14 Ga0070676_10219831 3300005328 Bacteria 1254
15 Ga0070700_100000108 3300005441 Bacteria 52617
16 Ga0070663_100243809 3300005455 Bacteria 1420
17 Ga0070678_100014247 3300005456 Bacteria 5009
18 Ga0068856_100340444 3300005614 Bacteria 1518
19 Ga0081455_10008129 3300005937 Bacteria 10946
20 Ga0081538_10053987 3300005981 Bacteria 2382
21 Ga0081540_1000768 3300005983 Bacteria 29471
22 Ga0081540_1002986 3300005983 Bacteria 13558
23 Ga0075362_10005295 3300006177 Bacteria 4709
24 Ga0075366_10046616 3300006195 Bacteria 2569
25 Ga0075431_100001016 3300006847 Bacteria 24985
26 Ga0075429_100248008 3300006880 Bacteria 1559
27 Ga0079104_1000008 3300006946 Bacteria 371223
28 Ga0105251_10012097 3300009011 Bacteria 4897
29 Ga0105244_10041605 3300009036 Bacteria 2380
30 Ga0105250_10002142 3300009092 Bacteria 10134
31 Ga0105243_10000269 3300009148 Bacteria 58482
32 Ga0105243_10003003 3300009148 Bacteria 13935
33 Ga0105248_10011979 3300009177 Bacteria 9564
34 Ga0105248_10018714 3300009177 Bacteria 7658
35 Ga0157371_10000283 3300013102 Bacteria 68598
36 Ga0157371_10012259 3300013102 Bacteria 6564
37 Ga0157370_10000335 3300013104 Bacteria 59202
38 Ga0157369_10074677 3300013105 Bacteria 3636
39 Ga0157372_10833013 3300013307 Bacteria 1071
40 Ga0163163_10001436 3300014325 Bacteria 20136
41 Ga0182008_10000377 3300014497 Bacteria 34436
42 Ga0157376_10374469 3300014969 Bacteria 1370
43 Ga0209566_100760 3300025225 Bacteria 17486
44 Ga0209566_100902 3300025225 Bacteria 14165
45 Ga0209674_100690 3300025226 Bacteria 11771
46 Ga0209674_112550 3300025226 Bacteria 821
47 Ga0209672_100153 3300025228 Bacteria 61197
48 Ga0209672_100478 3300025228 Bacteria 22439
49 Ga0209147_100181 3300025229 Bacteria 78139
50 Ga0209147_100334 3300025229 Bacteria 35260
51 Ga0209258_100023 3300025242 Bacteria 547286
52 Ga0209148_1000646 3300025254 Bacteria 30170
53 Ga0209455_1000064 3300025272 Bacteria 332404
54 Ga0209676_1000162 3300025292 Bacteria 159931
55 Ga0209025_1001744 3300025294 Bacteria 26103
56 Ga0209051_1000274 3300025303 Bacteria 84662
57 Ga0207696_1002086 3300025711 Bacteria 10078
58 Ga0207709_10000121 3300025935 Bacteria 116804
59 Ga0207709_10000205 3300025935 Bacteria 77131
60 Ga0207711_10077597 3300025941 Bacteria 2896
61 Ga0207711_10105067 3300025941 Bacteria 2504
62 Ga0207708_10000161 3300026075 Bacteria 52717
63 Ga0207683_10040574 3300026121 Bacteria 4063
64 Ga0209281_1000029 3300027111 Bacteria 431495
65 Ga0209371_1000002 3300027312 Bacteria 1551985
66 Ga0209371_1000166 3300027312 Bacteria 100164
67 Ga0268256_1000002 3300030500 Bacteria 1535763
68 Ga0268256_1000139 3300030500 Bacteria 100164
69 Ga0265328_10002843 3300031239 Bacteria 7727
70 Ga0265328_10007377 3300031239 Bacteria 4585
71 Ga0265328_10090683 3300031239 Bacteria 1129
72 Ga0265331_10000368 3300031250 Bacteria 47070
73 Ga0307408_100116064 3300031548 Bacteria 2066
74 Ga0307408_100363972 3300031548 Bacteria 1231
75 Ga0307410_10185503 3300031852 Bacteria 1578
76 Ga0307406_10301525 3300031901 Bacteria 1231
77 Ga0307409_100323366 3300031995 Bacteria 1445
78 Ga0307409_100630331 3300031995 Bacteria 1063
79 Ga0307416_100023174 3300032002 Bacteria 4500
80 Ga0307416_100401287 3300032002 Bacteria 1409
81 Ga0307414_10097716 3300032004 Bacteria 2201
82 Ga0307415_100010362 3300032126 Bacteria 5277
83 Ga0373934_0037339 3300035086 Bacteria 1913
84 Ga0373947_0048865 3300035725 Bacteria 2539
85 Ga0436364_0511017 3300037853 Bacteria 4847
86 Ga0436364_0656171 3300037853 Bacteria 13437
87 Ga0436364_0804462 3300037853 Bacteria 2226
88 Ga0436364_1423459 3300037853 Bacteria 1405
89 Ga0436365_0088206 3300039437 Bacteria 1259
90 Ga0436365_1207578 3300039437 Bacteria 1495
91 Ga0436361_1206134 3300039447 Bacteria 2535
92 Ga0439436_0029746 3300041404 Bacteria 1589
93 Ga0439438_006711 3300041405 Bacteria 4019
94 Ga0439447_000327 3300041407 Bacteria 17152
95 Ga0439466_0012583 3300041411 Bacteria 3114
96 Ga0451853_0987403 3300041512 Bacteria 7121
97 Ga0439432_057089 3300042006 Bacteria 1209
98 Ga0439452_001170 3300042010 Bacteria 11315
99 Ga0450923_000250 3300042125 Bacteria 5301
100 Ga0439434_0001069 3300042435 Bacteria 7935
101 Ga0466969_0010281 3300044656 Bacteria 4963
102 Ga0466969_0036267 3300044656 Bacteria 2491
103 Ga0466965_0050539 3300044683 Bacteria 2061
104 Ga0466965_0051649 3300044683 Bacteria 2040
105 Ga0466966_0008143 3300044684 Bacteria 6945
106 Ga0466966_0089243 3300044684 Bacteria 1915
107 Ga0466961_0045575 3300044693 Bacteria 2806
108 Ga0466961_0111518 3300044693 Bacteria 1720
109 Ga0453684_0004134 3300044712 Bacteria 31428
110 Ga0453684_0031891 3300044712 Bacteria 7390
111 Ga0466971_0075624 3300044719 Bacteria 1532
112 Ga0466970_0051883 3300044765 Bacteria 2189
113 Ga0466957_0036504 3300044842 Bacteria 2955
114 Ga0466959_0017603 3300045049 Bacteria 5240
115 Ga0466958_0063827 3300045836 Bacteria 2246
116 Ga0466967_0242624 3300045976 Bacteria 1719
117 Ga0495592_0007959 3300046454 Bacteria 7950
118 Ga0495603_0001955 3300046455 Bacteria 12164
119 Ga0495629_0114381 3300046459 Bacteria 1880
120 Ga0495641_0025211 3300046461 Bacteria 2920
121 Ga0495653_0008318 3300046463 Bacteria 8503
122 Ga0495650_0042332 3300046471 Bacteria 1939
123 Ga0495580_0000008 3300046472 Bacteria 102421
124 Ga0495582_0003975 3300046473 Bacteria 8307
125 Ga0495606_0029847 3300046507 Bacteria 3821
126 Ga0495618_0021227 3300046514 Bacteria 4003
127 Ga0495618_0256787 3300046514 Bacteria 1095
128 Ga0495628_0000175 3300046516 Bacteria 56421
129 Ga0495630_0002155 3300046517 Bacteria 13701
130 Ga0495648_0015352 3300046524 Bacteria 5562
131 Ga0495648_0016182 3300046524 Bacteria 5382
132 Ga0495652_0010041 3300046529 Bacteria 8580
133 Ga0495665_0002036 3300046531 Bacteria 10951
134 Ga0495640_0003454 3300046533 Bacteria 12715
135 Ga0495586_0003318 3300046535 Bacteria 8634
136 Ga0495587_0000444 3300046536 Bacteria 28997
137 Ga0495645_0000604 3300046543 Bacteria 24758
138 Ga0495645_0014766 3300046543 Bacteria 5547
139 Ga0495634_0004322 3300046642 Bacteria 11194
140 Ga0495625_0178036 3300046660 Bacteria 1416
141 Ga0495661_0001487 3300046665 Bacteria 19546
142 Ga0495588_0111804 3300046674 Bacteria 1439
143 Ga0495588_0153029 3300046674 Bacteria 1219
144 Ga0495599_0000157 3300046678 Bacteria 44891
145 Ga0495623_0001909 3300046679 Bacteria 13989
146 Ga0495646_0011523 3300046680 Bacteria 5615
147 Ga0495613_0132367 3300046689 Bacteria 1785
148 Ga0495624_0039731 3300046690 Bacteria 3015
149 Ga0495624_0258904 3300046690 Bacteria 1051
150 Ga0495671_0011385 3300046692 Bacteria 4897
151 Ga0495649_0031265 3300046694 Bacteria 2936
152 Ga0495589_0040379 3300046794 Bacteria 2330
153 Ga0495581_0003836 3300047315 Bacteria 8643
154 Ga0495604_0003016 3300047317 Bacteria 13463
155 Ga0495674_0136376 3300047319 Bacteria 2064
156 Ga0495674_0155113 3300047319 Bacteria 1918
157 Ga0495672_0004400 3300047320 Bacteria 11553
158 Ga0495676_0039798 3300047321 Bacteria 3889
159 Ga0495680_0002162 3300047322 Bacteria 20362
160 Ga0495683_0007461 3300047323 Bacteria 5911
161 Ga0495675_0004398 3300047444 Bacteria 8528
162 Ga0495679_003189 3300047446 Bacteria 7993
163 Ga0495681_0097998 3300047470 Bacteria 1286
164 Ga0495684_0002775 3300047471 Bacteria 13818
165 Ga0495686_0031486 3300047472 Bacteria 3439
166 Ga0495593_0027104 3300047673 Bacteria 3156
167 Ga0495602_0005092 3300048088 Bacteria 13772
168 Ga0495614_0001254 3300048089 Bacteria 10908
169 Ga0496101_0272983 3300048904 Bacteria 1320
170 Ga0496104_0002102 3300048907 Bacteria 17303
171 Ga0496105_0001819 3300048908 Bacteria 15276
172 Ga0496108_0001892 3300048911 Bacteria 16769
173 Ga0496109_0003702 3300048912 Bacteria 12772
174 Ga0496111_0012654 3300048914 Bacteria 5718
175 Ga0496112_0003469 3300048915 Bacteria 13040
176 Ga0496113_0000597 3300048916 Bacteria 18003
177 Ga0496114_0036717 3300048917 Bacteria 4051
178 Ga0496116_0080187 3300048919 Bacteria 2028
179 Ga0496117_0035018 3300048920 Bacteria 3775
180 Ga0496117_0161378 3300048920 Bacteria 1313
181 Ga0496118_0001331 3300048921 Bacteria 37503
182 Ga0496119_0001586 3300048922 Bacteria 27039
183 Ga0496119_0025275 3300048922 Bacteria 4151
184 Ga0496121_0003302 3300048924 Bacteria 23160
185 Ga0496122_0001001 3300048925 Bacteria 50171
186 Ga0496122_0034612 3300048925 Bacteria 4130
187 Ga0496123_0001664 3300048926 Bacteria 29821
188 Ga0496123_0018508 3300048926 Bacteria 5537
189 Ga0496124_0000037 3300048927 Bacteria 317430
190 Ga0496124_0108263 3300048927 Bacteria 2241
191 Ga0496126_0000036 3300048929 Bacteria 354901
192 Ga0496126_0002253 3300048929 Bacteria 26616
193 Ga0496126_0086678 3300048929 Bacteria 2760
194 Ga0495682_0003225 3300049460 Bacteria 7327
195 Ga0501033_0186903 3300049570 Bacteria 1484
196 Ga0501070_0151131 3300049586 Unclassified 1916
197 Ga0501225_0128655 3300049705 Bacteria 757
198 Ga0501044_0020288 3300049823 Bacteria 7093
199 nmdc:mga03683_16792_c1 3300050489 Bacteria 2758
200 nmdc:mga0k408_46461_c1 3300050493 Bacteria 2507
201 nmdc:mga09592_17128_c1 3300050508 Bacteria 5932
202 nmdc:mga09592_263414_c1 3300050508 Bacteria 1495
203 nmdc:mga0qj67_9021_c1 3300050509 Bacteria 7399
204 nmdc:mga06r32_827_c1 3300050510 Bacteria 27437
205 Ga0500556_0000097 3300053104 Bacteria 81329
206 Ga0500616_0108495 3300053153 Bacteria 1345
207 Ga0500645_012561 3300053730 Bacteria 2735
208 Ga0590071_009761 3300059421 Bacteria 2252

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046471 Ga0495650_0042332 Ga0495650_0042332_23_646 207
2 3300046660 Ga0495625_0178036 Ga0495625_0178036_551_1318 222
3 3300049705 Ga0501225_0128655 Ga0501225_0128655_44_745 226
4 3300031901 Ga0307406_10301525 Ga0307406_103015252 233
5 3300032126 Ga0307415_100010362 Ga0307415_1000103622 233
6 3300048925 Ga0496122_0034612 Ga0496122_0034612_1425_2195 235
7 3300048927 Ga0496124_0108263 Ga0496124_0108263_727_1494 235
8 3300005983 Ga0081540_1002986 Ga0081540_10029862 237
9 3300048920 Ga0496117_0035018 Ga0496117_0035018_1711_2481 237
10 3300048921 Ga0496118_0001331 Ga0496118_0001331_18895_19665 237
11 3300048926 Ga0496123_0018508 Ga0496123_0018508_2360_3130 237
12 3300003322 rootL2_10035881 rootL2_100358812 239
13 3300048922 Ga0496119_0025275 Ga0496119_0025275_1182_1952 239
14 3300048927 Ga0496124_0000037 Ga0496124_0000037_70788_71558 239
15 3300031239 Ga0265328_10090683 Ga0265328_100906832 240
16 3300037853 Ga0436364_1423459 Ga0436364_1423459_200_943 240
17 3300045976 Ga0466967_0242624 Ga0466967_0242624_115_837 240
18 3300048929 Ga0496126_0000036 Ga0496126_0000036_59689_60411 240
19 3300046690 Ga0495624_0258904 Ga0495624_0258904_30_776 241
20 3300046794 Ga0495589_0040379 Ga0495589_0040379_1573_2319 241
21 3300041512 Ga0451853_0987403 Ga0451853_0987403_2438_3199 243
22 iso_pu_bacteria 2675903059 2676486206 245
23 3300031239 Ga0265328_10007377 Ga0265328_100073773 246
24 iso_pu_bacteria 2510065053 2510282189 246
25 iso_pu_bacteria 2510065055 2510291606 246
26 iso_pu_bacteria 2510065058 2510310337 246
27 iso_pu_bacteria 2554235132 2554812866 246
28 iso_pu_bacteria 2606217733 2608383328 246
29 iso_pu_bacteria 2773857672 2774130891 246
30 iso_pu_bacteria 2917832318 2917834857 246
31 iso_pu_bacteria 2919125081 2919128812 246
32 iso_pu_bacteria 2974298342 2974299974 246
33 iso_pu_bacteria 2984499530 2984502353 246
34 iso_pu_bacteria 2984504281 2984508095 246
35 iso_pu_bacteria 8016728285 8016729716 246
36 3300003758 Ga0055532_1000854 Ga0055532_100085411 247
37 3300003758 Ga0055532_1001852 Ga0055532_10018525 247
38 3300003760 Ga0055527_1001312 Ga0055527_10013123 247
39 3300003761 Ga0055535_1002398 Ga0055535_10023985 247
40 3300003762 Ga0055542_1002272 Ga0055542_10022725 247
41 3300003763 Ga0055529_1000778 Ga0055529_10007785 247
42 3300003841 Ga0055541_1006994 Ga0055541_10069943 247
43 3300025225 Ga0209566_100760 Ga0209566_10076015 247
44 3300025225 Ga0209566_100902 Ga0209566_1009024 247
45 3300025226 Ga0209674_100690 Ga0209674_10069011 247
46 3300025226 Ga0209674_112550 Ga0209674_1125501 247
47 3300025228 Ga0209672_100153 Ga0209672_1001536 247
48 3300025228 Ga0209672_100478 Ga0209672_10047812 247
49 3300025229 Ga0209147_100181 Ga0209147_10018167 247
50 3300025229 Ga0209147_100334 Ga0209147_1003346 247
51 3300025242 Ga0209258_100023 Ga0209258_100023515 247
52 3300025254 Ga0209148_1000646 Ga0209148_10006466 247
53 3300025272 Ga0209455_1000064 Ga0209455_1000064311 247
54 3300044656 Ga0466969_0010281 Ga0466969_0010281_2647_3429 247
55 3300044656 Ga0466969_0036267 Ga0466969_0036267_646_1428 247
56 3300044683 Ga0466965_0050539 Ga0466965_0050539_1062_1844 247
57 3300044683 Ga0466965_0051649 Ga0466965_0051649_621_1430 247
58 3300044684 Ga0466966_0008143 Ga0466966_0008143_3201_3983 247
59 3300044684 Ga0466966_0089243 Ga0466966_0089243_646_1428 247
60 3300044693 Ga0466961_0111518 Ga0466961_0111518_313_1095 247
61 3300044765 Ga0466970_0051883 Ga0466970_0051883_273_1055 247
62 3300045049 Ga0466959_0017603 Ga0466959_0017603_2514_3296 247
63 iso_pu_bacteria 2600255256 2601535979 247
64 iso_pu_bacteria 2600255257 2601540473 247
65 iso_pu_bacteria 2600255310 2601758973 247
66 iso_pu_bacteria 2600255311 2601764875 247
67 iso_pu_bacteria 2602042046 2603637173 247
68 iso_pu_bacteria 2706794495 2707100545 247
69 iso_pu_bacteria 2791354903 2791921955 247
70 iso_pu_bacteria 2811995292 2813728188 247
71 iso_pu_bacteria 2814123068 2814695731 247
72 iso_pu_bacteria 2854601825 2854604287 247
73 iso_pu_bacteria 2501025501 2501070592 248
74 iso_pu_bacteria 2501025502 2501080953 248
75 iso_pu_bacteria 2501025504 2501411607 248
76 iso_pu_bacteria 2510917013 2511091640 248
77 iso_pu_bacteria 2510917014 2511099579 248
78 iso_pu_bacteria 2510917015 2511106755 248
79 iso_pu_bacteria 2511231221 2512037422 248
80 iso_pu_bacteria 2515154189 2516017960 248
81 iso_pu_bacteria 2519103095 2519460804 248
82 iso_pu_bacteria 2582581311 2585293631 248
83 iso_pu_bacteria 2599185239 2599741887 248
84 iso_pu_bacteria 2599185239 2599741987 248
85 iso_pu_bacteria 2600255067 2600811469 248
86 iso_pu_bacteria 2721755523 2722880821 248
87 iso_pu_bacteria 2751185788 2753302340 248
88 iso_pu_bacteria 2751185846 2753569272 248
89 iso_pu_bacteria 2808606384 2808972789 248
90 iso_pu_bacteria 2808606390 2809007771 248
91 iso_pu_bacteria 2808606391 2809014689 248
92 iso_pu_bacteria 2816332119 2816421622 248
93 iso_pu_bacteria 2816332253 2817259336 248
94 iso_pu_bacteria 2816332256 2817280253 248
95 iso_pu_bacteria 2816332286 2817456480 248
96 iso_pu_bacteria 2838694306 2838699582 248
97 iso_pu_bacteria 2839138175 2839144508 248
98 iso_pu_bacteria 2858950400 2858956723 248
99 iso_pu_bacteria 2870068957 2870077224 248
100 iso_pu_bacteria 2885198086 2885203784 248
101 iso_pu_bacteria 2885211737 2885217881 248
102 iso_pu_bacteria 2904541872 2904549936 248
103 iso_pu_bacteria 2919042368 2919045499 248
104 iso_pu_bacteria 2928104781 2928105286 248
105 iso_pu_bacteria 2929160207 2929161367 248
106 iso_pu_bacteria 2984551494 2984554490 248
107 iso_pu_bacteria 8018845410 8018851982 248
108 iso_pu_bacteria 8020807995 8020808614 248
109 iso_pu_bacteria 8040167225 8040171266 248
110 iso_pu_bacteria 8040173305 8040176059 248
111 3300006880 Ga0075429_100248008 Ga0075429_1002480082 249
112 3300014969 Ga0157376_10374469 Ga0157376_103744692 249
113 3300032002 Ga0307416_100401287 Ga0307416_1004012872 249
114 3300048922 Ga0496119_0001586 Ga0496119_0001586_15661_16425 249
115 3300050493 nmdc:mga0k408_46461_c1 nmdc:mga0k408_46461_c1_1157_1906 249
116 3300050508 nmdc:mga09592_263414_c1 nmdc:mga09592_263414_c1_359_1111 249
117 iso_pu_bacteria 2919450847 2919452045 249
118 iso_pu_bacteria 2939631187 2939634084 249
119 iso_pu_bacteria 8001845381 8001849872 249
120 3300005981 Ga0081538_10053987 Ga0081538_100539873 250
121 3300009011 Ga0105251_10012097 Ga0105251_100120971 250
122 3300009036 Ga0105244_10041605 Ga0105244_100416052 250
123 3300013102 Ga0157371_10000283 Ga0157371_100002836 250
124 3300013102 Ga0157371_10012259 Ga0157371_100122596 250
125 3300013105 Ga0157369_10074677 Ga0157369_100746773 250
126 3300013307 Ga0157372_10833013 Ga0157372_108330131 250
127 3300031548 Ga0307408_100116064 Ga0307408_1001160641 250
128 3300031548 Ga0307408_100363972 Ga0307408_1003639721 250
129 3300031852 Ga0307410_10185503 Ga0307410_101855032 250
130 3300031995 Ga0307409_100323366 Ga0307409_1003233662 250
131 3300031995 Ga0307409_100630331 Ga0307409_1006303311 250
132 3300032002 Ga0307416_100023174 Ga0307416_1000231743 250
133 3300037853 Ga0436364_0804462 Ga0436364_0804462_1027_1791 250
134 3300041404 Ga0439436_0029746 Ga0439436_0029746_743_1501 250
135 3300041405 Ga0439438_006711 Ga0439438_006711_1274_2032 250
136 3300041407 Ga0439447_000327 Ga0439447_000327_5359_6117 250
137 3300041411 Ga0439466_0012583 Ga0439466_0012583_1965_2723 250
138 3300042006 Ga0439432_057089 Ga0439432_057089_323_1081 250
139 3300042010 Ga0439452_001170 Ga0439452_001170_3095_3853 250
140 3300042125 Ga0450923_000250 Ga0450923_000250_377_1135 250
141 3300042435 Ga0439434_0001069 Ga0439434_0001069_3459_4217 250
142 3300044842 Ga0466957_0036504 Ga0466957_0036504_180_932 250
143 3300045836 Ga0466958_0063827 Ga0466958_0063827_817_1569 250
144 3300059421 Ga0590071_009761 Ga0590071_009761_61_834 250
145 3300005456 Ga0070678_100014247 Ga0070678_1000142473 251
146 3300026121 Ga0207683_10040574 Ga0207683_100405742 251
147 3300027312 Ga0209371_1000002 Ga0209371_10000021221 251
148 3300030500 Ga0268256_1000002 Ga0268256_1000002242 251
149 3300044712 Ga0453684_0004134 Ga0453684_0004134_13768_14547 251
150 3300044712 Ga0453684_0031891 Ga0453684_0031891_2498_3271 251
151 3300046543 Ga0495645_0014766 Ga0495645_0014766_1905_2666 251
152 3300003187 JGI25151J46595_10006956 JGI25151J46595_100069563 252
153 3300003856 Ga0058692_1001488 Ga0058692_10014884 252
154 3300005328 Ga0070676_10219831 Ga0070676_102198311 252
155 3300005455 Ga0070663_100243809 Ga0070663_1002438092 252
156 3300006847 Ga0075431_100001016 Ga0075431_1000010166 252
157 3300006946 Ga0079104_1000008 Ga0079104_100000880 252
158 3300009092 Ga0105250_10002142 Ga0105250_100021423 252
159 3300009177 Ga0105248_10018714 Ga0105248_100187144 252
160 3300025294 Ga0209025_1001744 Ga0209025_100174411 252
161 3300025711 Ga0207696_1002086 Ga0207696_10020863 252
162 3300025935 Ga0207709_10000121 Ga0207709_1000012146 252
163 3300025941 Ga0207711_10077597 Ga0207711_100775972 252
164 3300025941 Ga0207711_10105067 Ga0207711_101050672 252
165 3300027111 Ga0209281_1000029 Ga0209281_1000029315 252
166 3300027312 Ga0209371_1000166 Ga0209371_100016632 252
167 3300030500 Ga0268256_1000139 Ga0268256_100013966 252
168 3300031239 Ga0265328_10002843 Ga0265328_100028435 252
169 3300031250 Ga0265331_10000368 Ga0265331_1000036846 252
170 3300044719 Ga0466971_0075624 Ga0466971_0075624_530_1312 252
171 3300046454 Ga0495592_0007959 Ga0495592_0007959_238_1017 252
172 3300046455 Ga0495603_0001955 Ga0495603_0001955_1815_2594 252
173 3300046459 Ga0495629_0114381 Ga0495629_0114381_74_853 252
174 3300046461 Ga0495641_0025211 Ga0495641_0025211_2033_2812 252
175 3300046463 Ga0495653_0008318 Ga0495653_0008318_2168_2947 252
176 3300046472 Ga0495580_0000008 Ga0495580_0000008_86597_87376 252
177 3300046473 Ga0495582_0003975 Ga0495582_0003975_2364_3143 252
178 3300046507 Ga0495606_0029847 Ga0495606_0029847_495_1274 252
179 3300046514 Ga0495618_0021227 Ga0495618_0021227_1813_2592 252
180 3300046516 Ga0495628_0000175 Ga0495628_0000175_48179_48958 252
181 3300046517 Ga0495630_0002155 Ga0495630_0002155_3618_4397 252
182 3300046524 Ga0495648_0015352 Ga0495648_0015352_2407_3186 252
183 3300046524 Ga0495648_0016182 Ga0495648_0016182_3559_4338 252
184 3300046529 Ga0495652_0010041 Ga0495652_0010041_2033_2812 252
185 3300046531 Ga0495665_0002036 Ga0495665_0002036_1816_2595 252
186 3300046533 Ga0495640_0003454 Ga0495640_0003454_1833_2612 252
187 3300046535 Ga0495586_0003318 Ga0495586_0003318_852_1631 252
188 3300046536 Ga0495587_0000444 Ga0495587_0000444_3411_4190 252
189 3300046543 Ga0495645_0000604 Ga0495645_0000604_6143_6922 252
190 3300046642 Ga0495634_0004322 Ga0495634_0004322_1139_1918 252
191 3300046665 Ga0495661_0001487 Ga0495661_0001487_3514_4293 252
192 3300046674 Ga0495588_0111804 Ga0495588_0111804_438_1217 252
193 3300046678 Ga0495599_0000157 Ga0495599_0000157_14895_15674 252
194 3300046679 Ga0495623_0001909 Ga0495623_0001909_8921_9700 252
195 3300046680 Ga0495646_0011523 Ga0495646_0011523_1554_2333 252
196 3300046689 Ga0495613_0132367 Ga0495613_0132367_331_1110 252
197 3300046690 Ga0495624_0039731 Ga0495624_0039731_276_1055 252
198 3300046692 Ga0495671_0011385 Ga0495671_0011385_3597_4376 252
199 3300046694 Ga0495649_0031265 Ga0495649_0031265_919_1698 252
200 3300047315 Ga0495581_0003836 Ga0495581_0003836_2098_2877 252
201 3300047317 Ga0495604_0003016 Ga0495604_0003016_7935_8714 252
202 3300047319 Ga0495674_0136376 Ga0495674_0136376_1010_1789 252
203 3300047319 Ga0495674_0155113 Ga0495674_0155113_276_1055 252
204 3300047320 Ga0495672_0004400 Ga0495672_0004400_2088_2867 252
205 3300047321 Ga0495676_0039798 Ga0495676_0039798_676_1455 252
206 3300047322 Ga0495680_0002162 Ga0495680_0002162_7673_8452 252
207 3300047323 Ga0495683_0007461 Ga0495683_0007461_4997_5776 252
208 3300047444 Ga0495675_0004398 Ga0495675_0004398_4539_5318 252
209 3300047446 Ga0495679_003189 Ga0495679_003189_5054_5833 252
210 3300047470 Ga0495681_0097998 Ga0495681_0097998_311_1090 252
211 3300047471 Ga0495684_0002775 Ga0495684_0002775_2887_3666 252
212 3300047673 Ga0495593_0027104 Ga0495593_0027104_2304_3083 252
213 3300048088 Ga0495602_0005092 Ga0495602_0005092_7224_8003 252
214 3300048089 Ga0495614_0001254 Ga0495614_0001254_8097_8876 252
215 3300048929 Ga0496126_0086678 Ga0496126_0086678_1714_2502 252
216 3300049460 Ga0495682_0003225 Ga0495682_0003225_2619_3398 252
217 3300050508 nmdc:mga09592_17128_c1 nmdc:mga09592_17128_c1_3775_4545 252
218 3300050509 nmdc:mga0qj67_9021_c1 nmdc:mga0qj67_9021_c1_1434_2204 252
219 3300050510 nmdc:mga06r32_827_c1 nmdc:mga06r32_827_c1_2363_3133 252
220 3300003781 Ga0055536_1002113 Ga0055536_10021137 253
221 3300003792 Ga0055540_1000291 Ga0055540_100029134 253
222 3300005441 Ga0070700_100000108 Ga0070700_10000010847 253
223 3300005614 Ga0068856_100340444 Ga0068856_1003404441 253
224 3300005937 Ga0081455_10008129 Ga0081455_100081293 253
225 3300005983 Ga0081540_1000768 Ga0081540_100076817 253
226 3300009148 Ga0105243_10003003 Ga0105243_100030034 253
227 3300014325 Ga0163163_10001436 Ga0163163_100014365 253
228 3300026075 Ga0207708_10000161 Ga0207708_1000016148 253
229 3300032004 Ga0307414_10097716 Ga0307414_100977162 253
230 3300035086 Ga0373934_0037339 Ga0373934_0037339_72_848 253
231 3300035725 Ga0373947_0048865 Ga0373947_0048865_784_1560 253
232 3300037853 Ga0436364_0656171 Ga0436364_0656171_5660_6439 253
233 3300039437 Ga0436365_1207578 Ga0436365_1207578_488_1264 253
234 3300039447 Ga0436361_1206134 Ga0436361_1206134_291_1067 253
235 3300046514 Ga0495618_0256787 Ga0495618_0256787_201_977 253
236 3300046674 Ga0495588_0153029 Ga0495588_0153029_418_1194 253
237 3300048904 Ga0496101_0272983 Ga0496101_0272983_278_1054 253
238 3300048907 Ga0496104_0002102 Ga0496104_0002102_2283_3059 253
239 3300048908 Ga0496105_0001819 Ga0496105_0001819_4587_5363 253
240 3300048911 Ga0496108_0001892 Ga0496108_0001892_9196_9972 253
241 3300048912 Ga0496109_0003702 Ga0496109_0003702_10569_11345 253
242 3300048914 Ga0496111_0012654 Ga0496111_0012654_929_1705 253
243 3300048915 Ga0496112_0003469 Ga0496112_0003469_8641_9417 253
244 3300048916 Ga0496113_0000597 Ga0496113_0000597_16625_17401 253
245 3300048917 Ga0496114_0036717 Ga0496114_0036717_1150_1926 253
246 3300048925 Ga0496122_0001001 Ga0496122_0001001_18674_19450 253
247 3300048926 Ga0496123_0001664 Ga0496123_0001664_7244_8020 253
248 3300049570 Ga0501033_0186903 Ga0501033_0186903_581_1354 253
249 3300049586 Ga0501070_0151131 Ga0501070_0151131_656_1423 253
250 3300049823 Ga0501044_0020288 Ga0501044_0020288_1111_1884 253
251 3300053104 Ga0500556_0000097 Ga0500556_0000097_56969_57745 253
252 3300053153 Ga0500616_0108495 Ga0500616_0108495_11_787 253
253 3300053730 Ga0500645_012561 Ga0500645_012561_578_1354 253
254 3300037853 Ga0436364_0511017 Ga0436364_0511017_1013_1792 254
255 iso_pu_bacteria 2904584206 2904589662 254
256 iso_pu_bacteria 2904589729 2904595311 254
257 3300009148 Ga0105243_10000269 Ga0105243_1000026932 255
258 3300025292 Ga0209676_1000162 Ga0209676_100016287 255
259 3300025303 Ga0209051_1000274 Ga0209051_100027455 255
260 3300025935 Ga0207709_10000205 Ga0207709_1000020521 255
261 iso_pu_bacteria 2738541307 2738879650 255
262 3300009177 Ga0105248_10011979 Ga0105248_100119792 256
263 3300047472 Ga0495686_0031486 Ga0495686_0031486_2393_3262 256
264 3300048919 Ga0496116_0080187 Ga0496116_0080187_1108_1977 256
265 3300048920 Ga0496117_0161378 Ga0496117_0161378_142_1011 256
266 iso_pu_bacteria 8057529695 8057533965 257
267 3300002705 JGI25156J39149_1000276 JGI25156J39149_100027634 258
268 3300006177 Ga0075362_10005295 Ga0075362_100052953 258
269 3300006195 Ga0075366_10046616 Ga0075366_100466163 258
270 3300013104 Ga0157370_10000335 Ga0157370_1000033533 258
271 3300014497 Ga0182008_10000377 Ga0182008_1000037727 258
272 3300039437 Ga0436365_0088206 Ga0436365_0088206_68_901 258
273 3300044693 Ga0466961_0045575 Ga0466961_0045575_1495_2271 258
274 3300048924 Ga0496121_0003302 Ga0496121_0003302_2706_3482 258
275 3300048929 Ga0496126_0002253 Ga0496126_0002253_10850_11626 258
276 3300050489 nmdc:mga03683_16792_c1 nmdc:mga03683_16792_c1_892_1668 258

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03746

LamB_YcsF

LamB/YcsF family

36

274

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
2dfa-assembly1.cif.gz_A crystal structure of lactam utilization protein from thermus thermophilus hb8 0.9526 8 257
1v6t-assembly1.cif.gz_A crystal structure of lactam utilization protein from pyrococcus horikoshii ot3 0.9506 8 258
2dfa-assembly1.cif.gz_A crystal structure of lactam utilization protein from thermus thermophilus hb8 0.9489 8 257
1v6t-assembly1.cif.gz_A crystal structure of lactam utilization protein from pyrococcus horikoshii ot3 0.9468 8 258
2xu2-assembly1.cif.gz_A crystal structure of the hypothetical protein pa4511 from pseudomonas aeruginosa 0.9389 10 245
ID Description Score Start End Superfamily
af_Q2FXX2_1_250_3.20.20.370 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycoside hydrolase/deacetylase 0.971 8 257 3.20.20.370
af_Q2FXX2_1_250_3.20.20.370 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycoside hydrolase/deacetylase 0.9672 8 257 3.20.20.370
2dfaA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycoside hydrolase/deacetylase 0.9526 8 257 3.20.20.370
1v6tA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycoside hydrolase/deacetylase 0.9506 8 258 3.20.20.370
2dfaA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycoside hydrolase/deacetylase 0.9489 8 257 3.20.20.370
ID Description Score Start End GO Terms
AF-A0A3S1W6F6-F1-model_v4 deleted 0.9927 115 258
AF-A0A3D9Z758-F1-model_v4 5-oxoprolinase subunit A (5-OPase subunit A) (EC 3.5.2.9) (5-oxoprolinase (ATP-hydrolyzing) subunit A) 0.9924 8 258 GO:0005524
GO:0005975
GO:0017168
AF-A0A2P5M1V1-F1-model_v4 LamB/YcsF family protein 0.9921 57 258 GO:0005975
AF-A0A5B2TEP5-F1-model_v4 5-oxoprolinase subunit A (5-OPase subunit A) (EC 3.5.2.9) (5-oxoprolinase (ATP-hydrolyzing) subunit A) 0.9886 7 257 GO:0005524
GO:0005975
GO:0017168
AF-A0A679F499-F1-model_v4 5-oxoprolinase subunit A (5-OPase subunit A) (EC 3.5.2.9) (5-oxoprolinase (ATP-hydrolyzing) subunit A) 0.9884 8 258 GO:0005524
GO:0005975
GO:0017168

Feature Viewer

pLDDT pTM Quality
90.6 0.89 High
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Predicted Structure (AlphaFold2)

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