F381001

General Info

Members Datasets Scaffolds Average Seq Length
276 223 552 428

Family's Representative Sequence

Representative Sequence 3300005617|Ga0068859_100002865|Ga0068859_10000286511
Length 481
Sequence MPRWPERRGRVRRPVGGKRVEVVVQLVAGGGEPSPAHQQHVRHPVPRRVAMLSMHTSPLEQPGTGDAGGLNVYVVELSRQLAALGTEVEVFTRATSSSLPPAAQLHPGVTVRHVPAGPFEEMQRAELPAWICAFTADVLRAEAEREPGWFDLVHSHYWLSGQVGLAVARRWGAPHVYTAHTLAKVKNRSLAAGDSPEPPARVLGEQEVVGAATRLIASTGEEARHLVDLYGADPRAVDVVAPGVDLETFQPGEQAAARRRIGVSPDGHLLLFVGRIQPLKAPDLLLHATAELLRRDGRLRESLTVAVVGGPSGSGLDRPDALVKLAADLGISDVMLFRPPVPRAELADWFRAATAVIVPSHSESFGLVAIEAQACGTPVVAAAVGGLRTAVADGRSGVLIEERDPAAYADVLARLLALPGWRRQLSAGARAHASGFGWSTTATGVLASYRAALSPVASAARGAPDTARRRTRPSSWSRVGA

Samples

Sample ID Description Type Environment
1 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
6 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
7 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
12 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
13 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
14 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
15 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
16 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
17 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
18 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
19 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
20 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
21 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
22 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
23 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
24 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
25 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
26 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
27 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
28 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
29 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
30 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
31 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
34 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
37 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
38 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
39 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
40 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
41 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
42 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
43 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
44 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
45 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
46 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
47 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
48 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
49 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
50 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
51 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
52 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
53 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
54 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
55 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
56 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
57 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
59 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
60 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
61 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
62 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
63 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
64 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
65 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
66 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
67 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
68 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
69 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
70 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
71 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
72 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
73 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
74 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
75 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
76 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
77 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
78 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
79 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
80 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
81 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
82 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
124 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
127 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
128 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
129 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
130 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
131 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
132 3300036459 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE5 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
133 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
134 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
135 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
136 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
137 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
138 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
139 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
140 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
141 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
142 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
143 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
144 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
145 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
146 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
147 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
148 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
149 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
150 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
151 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
152 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
153 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
154 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
155 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
156 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
157 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
158 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
159 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
160 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
161 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
162 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
163 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
164 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
165 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
166 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
167 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
168 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
169 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
170 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
171 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
172 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
173 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
174 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
175 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
176 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
177 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
178 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
179 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
180 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
181 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
182 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
183 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
184 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
185 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
186 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
187 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
188 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
189 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
190 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
191 2506783011 Frankia datiscae Dg1 Isolate Nodule
192 2508501039 Frankia saprophytica CN3 Isolate Nodule
193 2517572101 Frankia sp. DC12 Isolate Nodule
194 2527291627 Frankia casuarinae Thr Isolate Nodule
195 2527291629 Frankia sp. BMG5.23 Isolate Nodule
196 2546825537 Frankia sp. CcI6 Isolate Rhizoplane
197 2554235227 Arthrobacter sp. PAO19 Isolate Rhizosphere
198 2576861822 Frankia sp. CeD Isolate Nodule
199 2579778521 Frankia torreyi CpI1-S Isolate Unclassified
200 2619618881 Frankia sp. ACN1ag Isolate Unclassified
201 2619619003 Frankia sp. CpI1-P Isolate Nodule
202 2626541554 Frankia sp. AvcI.1 Isolate Nodule
203 2654587600 Glutamicibacter halophytocola KLBMP5180 Isolate Unclassified
204 2671180195 Frankia sp. CcI49 Isolate Nodule
205 2675902999 Frankia asymbiotica NRRL B-16386 Isolate Nodule
206 2684623035 Frankia sp. NRRL B-16219 Isolate Rhizosphere
207 2684623036 Frankia sp. CgIM4 Isolate Nodule
208 2687453737 Frankia sp. BMG5.36 Isolate Nodule
209 2687453743 Frankia colletiae Cc1.17 Isolate Nodule
210 2710264753 Frankia sp. KB5 Isolate Nodule
211 2773857921 Frankia asymbiotica NRRL B-16386 Isolate Nodule
212 2773857922 Frankia sp. CcI49 Isolate Nodule
213 2773857924 Frankia sp. CgIS1 Isolate Nodule
214 2773857933 Frankia sp. BMG5.30 Isolate Nodule
215 2861520306 Phytomonospora endophytica DSM 45386 Isolate Unclassified
216 2895880812 Frankia sp. BMG5.11 Isolate Unclassified
217 2946024296 Arthrobacter woluwensis W4I2 Isolate Rhizosphere
218 637000116 Frankia casuarinae CcI3 Isolate Nodule
219 8002775197 Frankia nepalensis CN7 Isolate Nodule
220 8002784119 Frankia sp. AgB1.9 Isolate Nodule
221 8054913762 Frankia gtarii Agncl-10 Isolate Nodule
222 8054920844 Frankia tisae Agncl-8 Isolate Nodule
223 8055157932 Frankia umida Ag45/Mut15 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 84.42
Metatranscriptomes 3.62
Isolates 11.96

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.54
Nodule 8.7
Rhizoplane 8.33
Rhizosphere 71.74
Stem 0
Stem Tuber 0
Unclassified 0.36

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068859_100002865 3300005617 Bacteria 17499
2 JGI24740J21852_10011749 3300001979 Bacteria 3323
3 JGI24739J22299_10023954 3300001989 Bacteria 2155
4 rootL2_10016080 3300003322 Bacteria 11024
5 JGI25407J50210_10006738 3300003373 Bacteria 2867
6 Ga0058862_10058996 3300004803 Unclassified 2383
7 Ga0070676_10056808 3300005328 Bacteria 2314
8 Ga0070670_100013381 3300005331 Bacteria 7028
9 Ga0068869_100002247 3300005334 Bacteria 11630
10 Ga0070680_100010828 3300005336 Bacteria 7041
11 Ga0070682_100003505 3300005337 Bacteria 8679
12 Ga0068868_100105015 3300005338 Bacteria 2290
13 Ga0070660_100126743 3300005339 Bacteria 2040
14 Ga0070689_100152233 3300005340 Bacteria 1866
15 Ga0070661_100046585 3300005344 Bacteria 3172
16 Ga0070692_10002993 3300005345 Bacteria 6725
17 Ga0070675_100024659 3300005354 Bacteria 4817
18 Ga0070675_100061389 3300005354 Bacteria 3104
19 Ga0070671_100004685 3300005355 Bacteria 10854
20 Ga0070688_100040966 3300005365 Bacteria 2841
21 Ga0070659_100047920 3300005366 Bacteria 3354
22 Ga0070709_10009385 3300005434 Bacteria 5396
23 Ga0070714_100048786 3300005435 Bacteria 3602
24 Ga0070713_100012408 3300005436 Bacteria 6248
25 Ga0070711_100014793 3300005439 Bacteria 4926
26 Ga0070700_100095524 3300005441 Bacteria 1949
27 Ga0070663_100012877 3300005455 Bacteria 5309
28 Ga0070678_100003352 3300005456 Bacteria 8922
29 Ga0070681_10011253 3300005458 Bacteria 8851
30 Ga0070681_10017106 3300005458 Bacteria 7248
31 Ga0070681_10023766 3300005458 Bacteria 6170
32 Ga0070706_100111323 3300005467 Bacteria 2548
33 Ga0070679_100012672 3300005530 Bacteria 8064
34 Ga0070679_100045702 3300005530 Bacteria 4364
35 Ga0070695_100023596 3300005545 Bacteria 3783
36 Ga0070665_100209918 3300005548 Bacteria 1948
37 Ga0070665_100284657 3300005548 Bacteria 1655
38 Ga0068856_100009984 3300005614 Bacteria 9218
39 Ga0068852_100168097 3300005616 Bacteria 2053
40 Ga0068859_100013425 3300005617 Bacteria 8214
41 Ga0068859_100043038 3300005617 Bacteria 4538
42 Ga0068864_100010511 3300005618 Bacteria 7648
43 Ga0068851_10004734 3300005834 Bacteria 6162
44 Ga0068870_10000741 3300005840 Bacteria 12565
45 Ga0068863_100000944 3300005841 Bacteria 29195
46 Ga0068858_100005053 3300005842 Bacteria 12934
47 Ga0068862_100001055 3300005844 Bacteria 26435
48 Ga0068862_100197832 3300005844 Bacteria 1811
49 Ga0081538_10000372 3300005981 Bacteria 51168
50 Ga0075365_10076859 3300006038 Bacteria 2255
51 Ga0075363_100001929 3300006048 Bacteria 8224
52 Ga0075364_10022139 3300006051 Bacteria 4011
53 Ga0075432_10002259 3300006058 Bacteria 6406
54 Ga0075369_10007287 3300006186 Bacteria 4207
55 Ga0075428_100028954 3300006844 Bacteria 6129
56 Ga0075428_100188593 3300006844 Bacteria 2230
57 Ga0075430_100010200 3300006846 Bacteria 7955
58 Ga0075431_100012975 3300006847 Bacteria 8414
59 Ga0075433_10001523 3300006852 Bacteria 17102
60 Ga0075429_100011873 3300006880 Bacteria 7553
61 Ga0075429_100069048 3300006880 Bacteria 3076
62 Ga0075436_100002333 3300006914 Bacteria 13094
63 Ga0097620_100002865 3300006931 Bacteria 17499
64 Ga0097620_100013425 3300006931 Bacteria 8214
65 Ga0097620_100043038 3300006931 Bacteria 4538
66 Ga0075435_100000742 3300007076 Bacteria 20215
67 Ga0105251_10027277 3300009011 Bacteria 2898
68 Ga0105240_10019614 3300009093 Bacteria 9032
69 Ga0111539_10023465 3300009094 Bacteria 7579
70 Ga0105245_10045654 3300009098 Bacteria 3913
71 Ga0105247_10000038 3300009101 Bacteria 164083
72 Ga0105247_10005863 3300009101 Bacteria 7676
73 Ga0105247_10009445 3300009101 Bacteria 5919
74 Ga0114129_10223852 3300009147 Bacteria 2537
75 Ga0105241_10003191 3300009174 Bacteria 12201
76 Ga0105248_10000419 3300009177 Bacteria 48685
77 Ga0105237_10110962 3300009545 Bacteria 2734
78 Ga0105238_10031094 3300009551 Bacteria 5435
79 Ga0105249_10003618 3300009553 Bacteria 13364
80 Ga0157370_10001509 3300013104 Bacteria 28736
81 Ga0157370_10016078 3300013104 Bacteria 7585
82 Ga0157369_10077576 3300013105 Bacteria 3561
83 Ga0157369_10161608 3300013105 Bacteria 2364
84 Ga0157374_10086109 3300013296 Bacteria 2989
85 Ga0157378_10120464 3300013297 Bacteria 2418
86 Ga0163162_10185929 3300013306 Bacteria 2205
87 Ga0157372_10071166 3300013307 Bacteria 3916
88 Ga0157372_10075210 3300013307 Bacteria 3811
89 Ga0157375_10026546 3300013308 Bacteria 5400
90 Ga0163163_10023378 3300014325 Bacteria 5865
91 Ga0163163_10064246 3300014325 Bacteria 3642
92 Ga0157377_10005840 3300014745 Bacteria 5819
93 Ga0157379_10001406 3300014968 Bacteria 19714
94 Ga0157379_10007482 3300014968 Bacteria 9456
95 Ga0157379_10088556 3300014968 Bacteria 2776
96 Ga0197907_11359737 3300020069 Bacteria 3345
97 Ga0206356_10092243 3300020070 Bacteria 1717
98 Ga0206356_10632478 3300020070 Bacteria 3975
99 Ga0206349_1829900 3300020075 Bacteria 2710
100 Ga0206352_11067095 3300020078 Bacteria 2031
101 Ga0206350_10348189 3300020080 Bacteria 3657
102 Ga0224712_10002790 3300022467 Bacteria 4400
103 Ga0224712_10022008 3300022467 Bacteria 2191
104 Ga0207656_10003472 3300025321 Bacteria 5422
105 Ga0207710_10000054 3300025900 Bacteria 180103
106 Ga0207710_10000199 3300025900 Bacteria 56491
107 Ga0207688_10007635 3300025901 Bacteria 5888
108 Ga0207699_10003829 3300025906 Bacteria 7181
109 Ga0207645_10012624 3300025907 Bacteria 5727
110 Ga0207643_10000039 3300025908 Bacteria 86154
111 Ga0207705_10008006 3300025909 Bacteria 7749
112 Ga0207654_10003354 3300025911 Bacteria 8105
113 Ga0207707_10017458 3300025912 Bacteria 6256
114 Ga0207707_10031092 3300025912 Bacteria 4671
115 Ga0207695_10048250 3300025913 Bacteria 4499
116 Ga0207671_10030312 3300025914 Bacteria 4034
117 Ga0207693_10126179 3300025915 Bacteria 2011
118 Ga0207663_10012114 3300025916 Bacteria 4652
119 Ga0207660_10006291 3300025917 Bacteria 7703
120 Ga0207649_10035182 3300025920 Bacteria 3008
121 Ga0207652_10008259 3300025921 Bacteria 8366
122 Ga0207652_10019479 3300025921 Bacteria 5581
123 Ga0207694_10048073 3300025924 Bacteria 3300
124 Ga0207650_10000470 3300025925 Bacteria 33897
125 Ga0207659_10025032 3300025926 Bacteria 4006
126 Ga0207687_10003341 3300025927 Bacteria 10839
127 Ga0207687_10054248 3300025927 Bacteria 2803
128 Ga0207687_10066241 3300025927 Bacteria 2567
129 Ga0207700_10019704 3300025928 Bacteria 4562
130 Ga0207664_10064789 3300025929 Bacteria 2924
131 Ga0207644_10008436 3300025931 Bacteria 6743
132 Ga0207690_10039812 3300025932 Bacteria 3068
133 Ga0207670_10186619 3300025936 Bacteria 1566
134 Ga0207711_10000357 3300025941 Bacteria 48637
135 Ga0207711_10003568 3300025941 Bacteria 13477
136 Ga0207689_10001294 3300025942 Bacteria 24111
137 Ga0207661_10044711 3300025944 Bacteria 3501
138 Ga0207679_10004273 3300025945 Bacteria 8873
139 Ga0207667_10031708 3300025949 Bacteria 5703
140 Ga0207651_10069158 3300025960 Bacteria 2492
141 Ga0207712_10025854 3300025961 Bacteria 3905
142 Ga0207640_10035605 3300025981 Bacteria 3117
143 Ga0207677_10027616 3300026023 Bacteria 3578
144 Ga0207703_10000047 3300026035 Bacteria 151177
145 Ga0207703_10028571 3300026035 Bacteria 4397
146 Ga0207678_10007846 3300026067 Bacteria 9418
147 Ga0207702_10000923 3300026078 Bacteria 30333
148 Ga0207702_10017941 3300026078 Bacteria 5855
149 Ga0207641_10002029 3300026088 Bacteria 19281
150 Ga0207641_10064719 3300026088 Bacteria 3125
151 Ga0207676_10006347 3300026095 Bacteria 8352
152 Ga0207683_10000214 3300026121 Bacteria 50433
153 Ga0207698_10013682 3300026142 Bacteria 5363
154 Ga0207428_10010249 3300027907 Bacteria 8376
155 Ga0268266_10018512 3300028379 Bacteria 5935
156 Ga0268265_10000915 3300028380 Bacteria 27323
157 Ga0307515_10029121 3300028794 Bacteria 9352
158 Ga0265340_10083287 3300031247 Bacteria 1503
159 Ga0265327_10035485 3300031251 Bacteria 2756
160 Ga0307509_10070481 3300031507 Bacteria 3650
161 Ga0316576_10006034 3300031727 Bacteria 7488
162 Ga0316574_0007142 3300035398 Bacteria 6104
163 Ga0372808_000034 3300036459 Bacteria 5511
164 Ga0395899_0007409 3300037312 Bacteria 8479
165 Ga0436364_1490538 3300037853 Bacteria 3085
166 Ga0451791_0615204 3300041451 Bacteria 1502
167 Ga0439452_013464 3300042010 Bacteria 2296
168 Ga0439463_006162 3300042016 Bacteria 2976
169 Ga0466969_0000991 3300044656 Bacteria 15336
170 Ga0466969_0005377 3300044656 Bacteria 6815
171 Ga0466972_0056579 3300044658 Bacteria 1886
172 Ga0466965_0102135 3300044683 Bacteria 1467
173 Ga0466961_0003745 3300044693 Bacteria 9503
174 Ga0466961_0007648 3300044693 Bacteria 6880
175 Ga0466963_0096034 3300044694 Bacteria 2024
176 Ga0466957_0003979 3300044842 Bacteria 8170
177 Ga0466959_0002194 3300045049 Bacteria 12414
178 Ga0466959_0005276 3300045049 Bacteria 8827
179 Ga0466959_0096237 3300045049 Bacteria 2123
180 Ga0466958_0002735 3300045836 Bacteria 8950
181 Ga0466958_0035250 3300045836 Bacteria 2989
182 Ga0466967_0037775 3300045976 Bacteria 4136
183 Ga0466967_0052038 3300045976 Bacteria 3592
184 Ga0495651_0000144 3300046462 Bacteria 52145
185 Ga0495618_0006010 3300046514 Bacteria 7377
186 Ga0495652_0001024 3300046529 Bacteria 31928
187 Ga0495623_0015591 3300046679 Bacteria 4914
188 Ga0495647_0042180 3300046681 Bacteria 1741
189 Ga0495658_0053323 3300046683 Bacteria 2297
190 Ga0495600_0009145 3300046809 Bacteria 6111
191 Ga0495602_0247237 3300048088 Bacteria 1331
192 Ga0496102_0066305 3300048905 Bacteria 3308
193 Ga0496102_0093285 3300048905 Bacteria 2789
194 Ga0496102_0137095 3300048905 Bacteria 2293
195 Ga0496104_0101633 3300048907 Bacteria 2753
196 Ga0496104_0227130 3300048907 Bacteria 1779
197 Ga0496105_0003580 3300048908 Bacteria 11531
198 Ga0496106_0005160 3300048909 Bacteria 9678
199 Ga0496106_0071833 3300048909 Bacteria 2646
200 Ga0496107_0039464 3300048910 Bacteria 3387
201 Ga0496109_0014144 3300048912 Bacteria 6937
202 Ga0496109_0099776 3300048912 Bacteria 2693
203 Ga0496110_0013675 3300048913 Bacteria 6721
204 Ga0496110_0099513 3300048913 Bacteria 2606
205 Ga0496110_0215765 3300048913 Bacteria 1745
206 Ga0496111_0007604 3300048914 Bacteria 7117
207 Ga0496111_0082096 3300048914 Bacteria 2353
208 Ga0496112_0017097 3300048915 Bacteria 6808
209 Ga0496113_0009924 3300048916 Bacteria 6272
210 Ga0496114_0069009 3300048917 Bacteria 2968
211 Ga0496114_0085433 3300048917 Bacteria 2673
212 Ga0496115_0172648 3300048918 Bacteria 1788
213 Ga0496116_0000182 3300048919 Bacteria 125343
214 Ga0496117_0010092 3300048920 Bacteria 8668
215 Ga0496117_0026920 3300048920 Bacteria 4490
216 Ga0496118_0001362 3300048921 Bacteria 36823
217 Ga0496118_0018308 3300048921 Bacteria 6324
218 Ga0496119_0000200 3300048922 Bacteria 84506
219 Ga0496119_0000475 3300048922 Bacteria 54868
220 Ga0496119_0003744 3300048922 Bacteria 15560
221 Ga0496119_0014615 3300048922 Bacteria 6122
222 Ga0496120_0000672 3300048923 Bacteria 50278
223 Ga0496120_0002957 3300048923 Bacteria 16188
224 Ga0496121_0004439 3300048924 Bacteria 18867
225 Ga0496121_0198341 3300048924 Bacteria 1433
226 Ga0496126_0169651 3300048929 Bacteria 1860
227 Ga0501069_0000754 3300049585 Bacteria 15112
228 Ga0501070_0068667 3300049586 Bacteria 2934
229 Ga0501071_0009541 3300049587 Bacteria 6470
230 Ga0501073_0000404 3300049589 Bacteria 29460
231 Ga0501074_0053996 3300049590 Bacteria 2898
232 Ga0501083_0001352 3300049744 Bacteria 16651
233 nmdc:mga03n38_683_c1 3300050490 Bacteria 8841
234 nmdc:mga00v17_34414_c1 3300050491 Bacteria 3009
235 nmdc:mga0yw44_82216_c1 3300050492 Bacteria 2020
236 nmdc:mga09592_194005_c1 3300050508 Bacteria 1758
237 nmdc:mga08y16_14275_c1 3300050511 Bacteria 8360
238 nmdc:mga0rr50_7905_c1 3300050513 Bacteria 6597
239 nmdc:mga08x19_1205_c1 3300050514 Bacteria 16152
240 nmdc:mga0a205_3125_c1 3300050515 Bacteria 14696
241 Ga0495601_0028352 3300053077 Bacteria 3468
242 Ga0501082_0140366 3300060353 Bacteria 2097
243 Ga0466962_0001309 3300061719 Bacteria 11484
244 2506868650 2506783011 Bacteria 5323186
245 2508670789 2508501039 Bacteria 9978592
246 2517762411 2517572101 Bacteria 6884336
247 2528204210 2527291627 Bacteria 5309833
248 2528214653 2527291629 Bacteria 5267418
249 2546947030 2546825537 Bacteria 5389291
250 2555229825 2554235227 Bacteria 3637389
251 2579747461 2576861822 Bacteria 5004595
252 2579854470 2579778521 Bacteria 7624758
253 2619853890 2619618881 Bacteria 7521104
254 2620349427 2619619003 Bacteria 7619552
255 2626634767 2626541554 Bacteria 7741902
256 2655032526 2654587600 Bacteria 3911798
257 2671835865 2671180195 Bacteria 9757215
258 2676201194 2675902999 Bacteria 9438463
259 2686539723 2684623035 Bacteria 8032739
260 2686543457 2684623036 Bacteria 5199090
261 2689959109 2687453737 Bacteria 11203906
262 2689992229 2687453743 Bacteria 8361025
263 2710603415 2710264753 Bacteria 5455564
264 2774845770 2773857921 Bacteria 9435764
265 2774854021 2773857922 Bacteria 9757215
266 2774867152 2773857924 Bacteria 5256821
267 2774905419 2773857933 Bacteria 5818019
268 2861527170 2861520306 Bacteria 8348283
269 2895884951 2895880812 Bacteria 11255272
270 2946026632 2946024296 Bacteria 3508095
271 637877787 637000116 Bacteria 5433628
272 8002783840 8002775197 Bacteria 10728764
273 8002791787 8002784119 Bacteria 9788632
274 8054920334 8054913762 Bacteria 7713009
275 8054927275 8054920844 Bacteria 7068637
276 8055160479 8055157932 Bacteria 6429399
277 Ga0068859_100002865
278 JGI24740J21852_10011749
279 JGI24739J22299_10023954
280 rootL2_10016080
281 JGI25407J50210_10006738
282 Ga0058862_10058996
283 Ga0070676_10056808
284 Ga0070670_100013381
285 Ga0068869_100002247
286 Ga0070680_100010828
287 Ga0070682_100003505
288 Ga0068868_100105015
289 Ga0070660_100126743
290 Ga0070689_100152233
291 Ga0070661_100046585
292 Ga0070692_10002993
293 Ga0070675_100024659
294 Ga0070675_100061389
295 Ga0070671_100004685
296 Ga0070688_100040966
297 Ga0070659_100047920
298 Ga0070709_10009385
299 Ga0070714_100048786
300 Ga0070713_100012408
301 Ga0070711_100014793
302 Ga0070700_100095524
303 Ga0070663_100012877
304 Ga0070678_100003352
305 Ga0070681_10011253
306 Ga0070681_10017106
307 Ga0070681_10023766
308 Ga0070706_100111323
309 Ga0070679_100012672
310 Ga0070679_100045702
311 Ga0070695_100023596
312 Ga0070665_100209918
313 Ga0070665_100284657
314 Ga0068856_100009984
315 Ga0068852_100168097
316 Ga0068859_100013425
317 Ga0068859_100043038
318 Ga0068864_100010511
319 Ga0068851_10004734
320 Ga0068870_10000741
321 Ga0068863_100000944
322 Ga0068858_100005053
323 Ga0068862_100001055
324 Ga0068862_100197832
325 Ga0081538_10000372
326 Ga0075365_10076859
327 Ga0075363_100001929
328 Ga0075364_10022139
329 Ga0075432_10002259
330 Ga0075369_10007287
331 Ga0075428_100028954
332 Ga0075428_100188593
333 Ga0075430_100010200
334 Ga0075431_100012975
335 Ga0075433_10001523
336 Ga0075429_100011873
337 Ga0075429_100069048
338 Ga0075436_100002333
339 Ga0097620_100002865
340 Ga0097620_100013425
341 Ga0097620_100043038
342 Ga0075435_100000742
343 Ga0105251_10027277
344 Ga0105240_10019614
345 Ga0111539_10023465
346 Ga0105245_10045654
347 Ga0105247_10000038
348 Ga0105247_10005863
349 Ga0105247_10009445
350 Ga0114129_10223852
351 Ga0105241_10003191
352 Ga0105248_10000419
353 Ga0105237_10110962
354 Ga0105238_10031094
355 Ga0105249_10003618
356 Ga0157370_10001509
357 Ga0157370_10016078
358 Ga0157369_10077576
359 Ga0157369_10161608
360 Ga0157374_10086109
361 Ga0157378_10120464
362 Ga0163162_10185929
363 Ga0157372_10071166
364 Ga0157372_10075210
365 Ga0157375_10026546
366 Ga0163163_10023378
367 Ga0163163_10064246
368 Ga0157377_10005840
369 Ga0157379_10001406
370 Ga0157379_10007482
371 Ga0157379_10088556
372 Ga0197907_11359737
373 Ga0206356_10092243
374 Ga0206356_10632478
375 Ga0206349_1829900
376 Ga0206352_11067095
377 Ga0206350_10348189
378 Ga0224712_10002790
379 Ga0224712_10022008
380 Ga0207656_10003472
381 Ga0207710_10000054
382 Ga0207710_10000199
383 Ga0207688_10007635
384 Ga0207699_10003829
385 Ga0207645_10012624
386 Ga0207643_10000039
387 Ga0207705_10008006
388 Ga0207654_10003354
389 Ga0207707_10017458
390 Ga0207707_10031092
391 Ga0207695_10048250
392 Ga0207671_10030312
393 Ga0207693_10126179
394 Ga0207663_10012114
395 Ga0207660_10006291
396 Ga0207649_10035182
397 Ga0207652_10008259
398 Ga0207652_10019479
399 Ga0207694_10048073
400 Ga0207650_10000470
401 Ga0207659_10025032
402 Ga0207687_10003341
403 Ga0207687_10054248
404 Ga0207687_10066241
405 Ga0207700_10019704
406 Ga0207664_10064789
407 Ga0207644_10008436
408 Ga0207690_10039812
409 Ga0207670_10186619
410 Ga0207711_10000357
411 Ga0207711_10003568
412 Ga0207689_10001294
413 Ga0207661_10044711
414 Ga0207679_10004273
415 Ga0207667_10031708
416 Ga0207651_10069158
417 Ga0207712_10025854
418 Ga0207640_10035605
419 Ga0207677_10027616
420 Ga0207703_10000047
421 Ga0207703_10028571
422 Ga0207678_10007846
423 Ga0207702_10000923
424 Ga0207702_10017941
425 Ga0207641_10002029
426 Ga0207641_10064719
427 Ga0207676_10006347
428 Ga0207683_10000214
429 Ga0207698_10013682
430 Ga0207428_10010249
431 Ga0268266_10018512
432 Ga0268265_10000915
433 Ga0307515_10029121
434 Ga0265340_10083287
435 Ga0265327_10035485
436 Ga0307509_10070481
437 Ga0316576_10006034
438 Ga0316574_0007142
439 Ga0372808_000034
440 Ga0395899_0007409
441 Ga0436364_1490538
442 Ga0451791_0615204
443 Ga0439452_013464
444 Ga0439463_006162
445 Ga0466969_0000991
446 Ga0466969_0005377
447 Ga0466972_0056579
448 Ga0466965_0102135
449 Ga0466961_0003745
450 Ga0466961_0007648
451 Ga0466963_0096034
452 Ga0466957_0003979
453 Ga0466959_0002194
454 Ga0466959_0005276
455 Ga0466959_0096237
456 Ga0466958_0002735
457 Ga0466958_0035250
458 Ga0466967_0037775
459 Ga0466967_0052038
460 Ga0495651_0000144
461 Ga0495618_0006010
462 Ga0495652_0001024
463 Ga0495623_0015591
464 Ga0495647_0042180
465 Ga0495658_0053323
466 Ga0495600_0009145
467 Ga0495602_0247237
468 Ga0496102_0066305
469 Ga0496102_0093285
470 Ga0496102_0137095
471 Ga0496104_0101633
472 Ga0496104_0227130
473 Ga0496105_0003580
474 Ga0496106_0005160
475 Ga0496106_0071833
476 Ga0496107_0039464
477 Ga0496109_0014144
478 Ga0496109_0099776
479 Ga0496110_0013675
480 Ga0496110_0099513
481 Ga0496110_0215765
482 Ga0496111_0007604
483 Ga0496111_0082096
484 Ga0496112_0017097
485 Ga0496113_0009924
486 Ga0496114_0069009
487 Ga0496114_0085433
488 Ga0496115_0172648
489 Ga0496116_0000182
490 Ga0496117_0010092
491 Ga0496117_0026920
492 Ga0496118_0001362
493 Ga0496118_0018308
494 Ga0496119_0000200
495 Ga0496119_0000475
496 Ga0496119_0003744
497 Ga0496119_0014615
498 Ga0496120_0000672
499 Ga0496120_0002957
500 Ga0496121_0004439
501 Ga0496121_0198341
502 Ga0496126_0169651
503 Ga0501069_0000754
504 Ga0501070_0068667
505 Ga0501071_0009541
506 Ga0501073_0000404
507 Ga0501074_0053996
508 Ga0501083_0001352
509 nmdc:mga03n38_683_c1
510 nmdc:mga00v17_34414_c1
511 nmdc:mga0yw44_82216_c1
512 nmdc:mga09592_194005_c1
513 nmdc:mga08y16_14275_c1
514 nmdc:mga0rr50_7905_c1
515 nmdc:mga08x19_1205_c1
516 nmdc:mga0a205_3125_c1
517 Ga0495601_0028352
518 Ga0501082_0140366
519 Ga0466962_0001309
520 2506868650
521 2508670789
522 2517762411
523 2528204210
524 2528214653
525 2546947030
526 2555229825
527 2579747461
528 2579854470
529 2619853890
530 2620349427
531 2626634767
532 2655032526
533 2671835865
534 2676201194
535 2686539723
536 2686543457
537 2689959109
538 2689992229
539 2710603415
540 2774845770
541 2774854021
542 2774867152
543 2774905419
544 2861527170
545 2895884951
546 2946026632
547 637877787
548 8002783840
549 8002791787
550 8054920334
551 8054927275
552 8055160479

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00534

Glycos_transf_1

Glycosyl transferases group 1

253

432

0.95

PF13692

Glyco_trans_1_4

Glycosyl transferases group 1

267

417

0.89

PF13579

Glyco_trans_4_4

Glycosyl transferase 4-like domain

68

243

0.88

PF13439

Glyco_transf_4

Glycosyltransferase Family 4

67

248

0.84

PF20706

GT4-conflict

Family 4 Glycosyltransferase in conflict systems

63

445

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
3c4q-assembly1.cif.gz_A structure of the retaining glycosyltransferase msha : the first step in mycothiol biosynthesis. organism : corynebacterium glutamicum- complex with udp 0.9369 2 405
3c4q-assembly2.cif.gz_B structure of the retaining glycosyltransferase msha : the first step in mycothiol biosynthesis. organism : corynebacterium glutamicum- complex with udp 0.9365 2 405
6kih-assembly2.cif.gz_B sucrose-phosphate synthase (tll1590) from thermosynechococcus elongatus 0.9248 2 401
3c4q-assembly1.cif.gz_A structure of the retaining glycosyltransferase msha : the first step in mycothiol biosynthesis. organism : corynebacterium glutamicum- complex with udp 0.9209 2 405
3c4q-assembly2.cif.gz_B structure of the retaining glycosyltransferase msha : the first step in mycothiol biosynthesis. organism : corynebacterium glutamicum- complex with udp 0.9205 2 405
ID Description Score Start End Superfamily
3c4vA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9634 194 382 3.40.50.2000
3c4qA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9542 2 193 3.40.50.2000
3c4vA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9531 194 382 3.40.50.2000
af_Q2G0L3_321_481_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9503 222 390 3.40.50.2000
af_Q58577_179_333_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9485 218 386 3.40.50.2000
ID Description Score Start End GO Terms
AF-A0A6B3HA68-F1-model_v4 Glycosyltransferase 0.9721 1 99 GO:0016740
AF-F4FEM8-F1-model_v4 deleted 0.9607 5 415
AF-A0A800CH53-F1-model_v4 Glycosyltransferase family 1 protein 0.9606 11 231 GO:0016758
AF-A0A800CH53-F1-model_v4 Glycosyltransferase family 1 protein 0.9564 11 231 GO:0016758
AF-A0A536NKE3-F1-model_v4 Glycosyltransferase family 1 protein 0.9476 2 302 GO:0016757

Map