F380720

General Info

Members Datasets Scaffolds Average Seq Length
275 210 261 249

Family's Representative Sequence

Representative Sequence 3300049581|Ga0501047_0240488|Ga0501047_0240488_211_1113
Length 300
Sequence MGHTRLAELGEAIERLSQASRLRPRAREVKALLDLLSPVRYGPTLTSIGPEMNKIALITGGGSGIGRAAALALLKHDWTVVITGRRREALDATVATAGSAASRLIPLTADVGDPFQVRQLFDQIRQQFGRLDLLFNNAGVSAPPVPVDELSFEQWQTVVNVNLTGSFLCAQAAFKLMKEQSPQGGRIINNGSVSAYAPRPNSAPYTSTKHAITGLTKSLALDGRLYRIACGQIDIGNADTEMASKMKAGVPQANGDVRVEPTMDVAHVADAIVHMAGLPLDANVLSVTLMATNMPFVGRG

Samples

Sample ID Description Type Environment
1 2585427591 Rahnella aquatilis OV744 Isolate Rhizosphere
2 2585427592 Rahnella aquatilis OV588 Isolate Rhizosphere
3 2643221548 Streptomyces sp. Root55 Isolate Unclassified
4 2643221598 Phenylobacterium sp. Root700 Isolate Unclassified
5 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
6 2667528173 Rahnella sp. NFIX50 Isolate Rhizoplane
7 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
8 2857542790 Achromobacter sp. R-72367 Isolate Unclassified
9 2904474040 Rahnella aquatilis 4485 Isolate Rhizosphere
10 2904504865 Serratia marcescens 1822 Isolate Unclassified
11 2919150387 Rahnella aceris 1817 Isolate Unclassified
12 2927143783 Rahnella sp. 2050 Isolate Unclassified
13 2929199973 Roseomonas sp. R-73070 Hybrid assembly Isolate Unclassified
14 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
15 3300002771 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB Metagenome Endosphere
16 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
17 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
18 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
19 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
20 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
21 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
22 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
23 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
24 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
25 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
26 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
27 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
28 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
29 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
30 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
31 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
32 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
33 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
34 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
35 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
36 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
37 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
38 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
39 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
40 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
41 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
42 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
43 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
44 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
45 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
46 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
47 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
48 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
49 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
50 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
51 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
52 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
53 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
54 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
55 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
56 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
57 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
58 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
59 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
60 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
61 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
62 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
63 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
64 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
65 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
66 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
67 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
68 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
69 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
70 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
71 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
72 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
73 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
74 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
75 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
76 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
77 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
78 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
79 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
80 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
81 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
82 3300025207 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
83 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
88 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
89 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
90 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
91 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
124 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
128 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
129 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
130 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
131 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
132 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
133 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
134 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
135 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
136 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
137 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
138 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
139 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
140 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
141 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
142 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
143 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
144 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
145 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
146 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
147 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
148 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
149 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
150 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
151 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
152 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
153 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
154 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
155 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
156 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
157 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
158 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
159 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
160 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
161 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
162 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
163 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
164 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
165 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
166 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
167 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
168 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
169 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
170 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
171 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
172 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
173 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
174 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
175 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
176 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
177 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
178 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
179 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
180 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
181 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
182 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
183 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
184 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
185 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
186 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
187 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
188 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
189 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
190 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
191 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
192 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
193 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
194 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
195 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
196 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
197 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
198 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
199 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
200 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
201 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
202 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
203 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
204 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
205 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
206 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
207 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
208 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
209 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
210 8055909800 Plastoroseomonas hellenica LMG 31523 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 94.55
Metatranscriptomes 0.36
Isolates 5.09

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8
Nodule 1.09
Rhizoplane 2.91
Rhizosphere 77.82
Stem 0
Stem Tuber 0
Unclassified 10.18

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25162J39368_1000002 3300002737 Bacteria 663004
2 JGI25163J39215_1000137 3300002771 Bacteria 29229
3 JGI25164J39214_1000098 3300002772 Bacteria 86651
4 JGI25406J46586_10001102 3300003203 Bacteria 12651
5 Ga0055538_1000003 3300003751 Bacteria 663004
6 Ga0055539_1000003 3300003752 Bacteria 663004
7 Ga0055533_1000005 3300003756 Bacteria 663004
8 Ga0055525_1000005 3300003759 Bacteria 663004
9 Ga0055541_1000003 3300003841 Bacteria 663004
10 Ga0065704_10000732 3300005289 Bacteria 21869
11 Ga0065707_10083265 3300005295 Bacteria 9742
12 Ga0070676_10226071 3300005328 Bacteria 1238
13 Ga0070683_100314993 3300005329 Bacteria 1489
14 Ga0070683_100398486 3300005329 Bacteria 1312
15 Ga0070690_100222379 3300005330 Bacteria 1323
16 Ga0070670_100617703 3300005331 Bacteria 971
17 Ga0070666_10063240 3300005335 Bacteria 2508
18 Ga0068868_100002632 3300005338 Bacteria 12458
19 Ga0068868_100072683 3300005338 Bacteria 2744
20 Ga0070689_100007276 3300005340 Bacteria 7720
21 Ga0070661_100235124 3300005344 Bacteria 1409
22 Ga0070673_100072390 3300005364 Bacteria 2772
23 Ga0070673_100482784 3300005364 Bacteria 1119
24 Ga0070659_100076213 3300005366 Bacteria 2674
25 Ga0070667_100281605 3300005367 Bacteria 1493
26 Ga0070667_100702642 3300005367 Bacteria 936
27 Ga0070714_100176108 3300005435 Bacteria 1944
28 Ga0070700_100363195 3300005441 Bacteria 1077
29 Ga0070708_100264604 3300005445 Bacteria 1617
30 Ga0070681_10257641 3300005458 Bacteria 1656
31 Ga0070681_10352733 3300005458 Bacteria 1381
32 Ga0070681_10415957 3300005458 Bacteria 1256
33 Ga0068867_100000042 3300005459 Bacteria 77140
34 Ga0068867_100268248 3300005459 Bacteria 1394
35 Ga0070679_100037350 3300005530 Bacteria 4824
36 Ga0070679_100072389 3300005530 Bacteria 3439
37 Ga0070684_100143148 3300005535 Bacteria 2163
38 Ga0070697_100219560 3300005536 Bacteria 1620
39 Ga0070686_100005315 3300005544 Bacteria 7122
40 Ga0070686_100321916 3300005544 Bacteria 1153
41 Ga0070665_100003139 3300005548 Bacteria 17790
42 Ga0068855_100642730 3300005563 Bacteria 1140
43 Ga0068856_100122328 3300005614 Bacteria 2604
44 Ga0068856_100220781 3300005614 Bacteria 1910
45 Ga0068852_100096294 3300005616 Bacteria 2660
46 Ga0068859_100069652 3300005617 Bacteria 3553
47 Ga0068859_100532197 3300005617 Bacteria 1270
48 Ga0068864_100187295 3300005618 Bacteria 1895
49 Ga0068864_100264852 3300005618 Bacteria 1600
50 Ga0068863_100046904 3300005841 Bacteria 4101
51 Ga0068863_100075297 3300005841 Bacteria 3194
52 Ga0068858_100034440 3300005842 Bacteria 4698
53 Ga0068858_100566490 3300005842 Bacteria 1100
54 Ga0068860_100037271 3300005843 Bacteria 4655
55 Ga0068860_100087497 3300005843 Bacteria 2966
56 Ga0081538_10002821 3300005981 Bacteria 16629
57 Ga0081539_10000240 3300005985 Bacteria 128629
58 Ga0097621_100008486 3300006237 Bacteria 7398
59 Ga0068871_100013065 3300006358 Bacteria 6156
60 Ga0075434_100281922 3300006871 Bacteria 1681
61 Ga0068865_100012639 3300006881 Bacteria 5319
62 Ga0097620_100069653 3300006931 Bacteria 3553
63 Ga0097620_100532228 3300006931 Bacteria 1270
64 Ga0105250_10000007 3300009092 Bacteria 355249
65 Ga0105250_10000233 3300009092 Bacteria 46449
66 Ga0111539_10000910 3300009094 Bacteria 38655
67 Ga0111539_10017525 3300009094 Bacteria 8866
68 Ga0111539_10021562 3300009094 Bacteria 7926
69 Ga0105245_10039429 3300009098 Bacteria 4204
70 Ga0105243_10159494 3300009148 Bacteria 1944
71 Ga0105248_10039107 3300009177 Bacteria 5311
72 Ga0105248_10095865 3300009177 Bacteria 3340
73 Ga0105248_10235253 3300009177 Bacteria 2062
74 Ga0105248_10306537 3300009177 Bacteria 1788
75 Ga0105237_10097863 3300009545 Bacteria 2925
76 Ga0105238_10002927 3300009551 Bacteria 17042
77 Ga0105239_10028728 3300010375 Bacteria 6114
78 Ga0105239_10552247 3300010375 Bacteria 1312
79 Ga0157371_10000006 3300013102 Bacteria 404774
80 Ga0157370_10001569 3300013104 Bacteria 28272
81 Ga0157374_10070508 3300013296 Bacteria 3294
82 Ga0157374_10077255 3300013296 Bacteria 3151
83 Ga0157378_10001465 3300013297 Bacteria 21300
84 Ga0163162_10010181 3300013306 Bacteria 9134
85 Ga0163162_10317273 3300013306 Bacteria 1691
86 Ga0163162_10615960 3300013306 Bacteria 1211
87 Ga0157375_11087706 3300013308 Bacteria 935
88 Ga0163163_10016965 3300014325 Bacteria 6780
89 Ga0157380_10003901 3300014326 Bacteria 10279
90 Ga0157377_10000038 3300014745 Bacteria 113777
91 Ga0214544_1001716 3300021320 Bacteria 46024
92 Ga0214542_1000082 3300021321 Bacteria 120825
93 Ga0214543_1000075 3300021327 Bacteria 120861
94 Ga0224712_10007231 3300022467 Bacteria 3220
95 Ga0209760_100138 3300025207 Bacteria 46217
96 Ga0209784_100001 3300025224 Bacteria 3600592
97 Ga0209566_100001 3300025225 Bacteria 3600765
98 Ga0209674_100002 3300025226 Bacteria 3600592
99 Ga0209563_100002 3300025230 Bacteria 2045675
100 Ga0207427_100009 3300025231 Bacteria 663036
101 Ga0209437_100001 3300025233 Bacteria 2045675
102 Ga0209677_100002 3300025253 Bacteria 2045675
103 Ga0209233_1011822 3300025261 Bacteria 2560
104 Ga0207696_1000029 3300025711 Bacteria 398074
105 Ga0207696_1000296 3300025711 Bacteria 58111
106 Ga0207655_1000359 3300025728 Bacteria 64874
107 Ga0207688_10051476 3300025901 Bacteria 2307
108 Ga0207680_10205868 3300025903 Bacteria 1343
109 Ga0207645_10075536 3300025907 Bacteria 2157
110 Ga0207705_10077014 3300025909 Bacteria 2425
111 Ga0207705_10378812 3300025909 Bacteria 1093
112 Ga0207707_10005486 3300025912 Bacteria 11088
113 Ga0207660_10083636 3300025917 Bacteria 2351
114 Ga0207660_10426316 3300025917 Bacteria 1070
115 Ga0207662_10091122 3300025918 Bacteria 1875
116 Ga0207649_10196793 3300025920 Bacteria 1421
117 Ga0207652_10001336 3300025921 Bacteria 21912
118 Ga0207652_10502652 3300025921 Bacteria 1091
119 Ga0207694_10000216 3300025924 Bacteria 56407
120 Ga0207650_10423880 3300025925 Bacteria 1104
121 Ga0207687_10002484 3300025927 Bacteria 12528
122 Ga0207687_10060280 3300025927 Bacteria 2676
123 Ga0207664_10201489 3300025929 Bacteria 1718
124 Ga0207690_10099296 3300025932 Bacteria 2075
125 Ga0207686_10009958 3300025934 Bacteria 5168
126 Ga0207686_10026698 3300025934 Bacteria 3372
127 Ga0207709_10211711 3300025935 Bacteria 1392
128 Ga0207670_10021080 3300025936 Bacteria 4015
129 Ga0207670_10195253 3300025936 Bacteria 1534
130 Ga0207669_10582586 3300025937 Bacteria 907
131 Ga0207711_10038609 3300025941 Bacteria 4061
132 Ga0207711_10114798 3300025941 Bacteria 2399
133 Ga0207711_10390973 3300025941 Bacteria 1291
134 Ga0207689_10034247 3300025942 Bacteria 4218
135 Ga0207689_10295918 3300025942 Bacteria 1341
136 Ga0207651_10076302 3300025960 Bacteria 2395
137 Ga0207640_10008503 3300025981 Bacteria 5702
138 Ga0207658_10512055 3300025986 Bacteria 1070
139 Ga0207677_10068946 3300026023 Bacteria 2485
140 Ga0207703_10086200 3300026035 Bacteria 2630
141 Ga0207641_10007863 3300026088 Bacteria 8849
142 Ga0207641_10055663 3300026088 Bacteria 3359
143 Ga0207648_10000118 3300026089 Bacteria 77144
144 Ga0207648_10010563 3300026089 Bacteria 8739
145 Ga0207648_10101716 3300026089 Bacteria 2518
146 Ga0207676_10190782 3300026095 Bacteria 1803
147 Ga0207676_10269571 3300026095 Bacteria 1541
148 Ga0207675_100003848 3300026118 Bacteria 14593
149 Ga0207675_100043480 3300026118 Bacteria 4195
150 Ga0207698_10072185 3300026142 Bacteria 2743
151 Ga0207428_10010497 3300027907 Bacteria 8267
152 Ga0207428_10156769 3300027907 Bacteria 1731
153 Ga0207428_10217036 3300027907 Bacteria 1435
154 Ga0268266_10000127 3300028379 Bacteria 149198
155 Ga0268266_10385101 3300028379 Bacteria 1323
156 Ga0268265_10445232 3300028380 Bacteria 1208
157 Ga0268264_10183521 3300028381 Bacteria 1902
158 Ga0265331_10025563 3300031250 Bacteria 2979
159 Ga0265331_10070516 3300031250 Bacteria 1636
160 Ga0265327_10000028 3300031251 Bacteria 361066
161 Ga0307513_10000980 3300031456 Bacteria 41364
162 Ga0307513_10022780 3300031456 Bacteria 7350
163 Ga0265314_10211825 3300031711 Bacteria 1137
164 Ga0307516_10001430 3300031730 Bacteria 32981
165 Ga0307413_10423641 3300031824 Bacteria 1049
166 Ga0307416_100228425 3300032002 Bacteria 1792
167 Ga0373936_0008228 3300035113 Bacteria 3920
168 Ga0373931_0172978 3300035691 Bacteria 1274
169 Ga0373933_0140990 3300035724 Bacteria 1522
170 Ga0373937_0003193 3300036401 Bacteria 13728
171 Ga0395900_0172242 3300037418 Bacteria 2203
172 Ga0395900_0393462 3300037418 Bacteria 1351
173 Ga0395900_0495911 3300037418 Bacteria 1172
174 Ga0395898_0133108 3300037466 Bacteria 2381
175 Ga0395898_0787343 3300037466 Bacteria 891
176 Ga0395901_0150069 3300038443 Bacteria 2450
177 Ga0400483_040284 3300039062 Bacteria 6113
178 Ga0436362_0783703 3300039453 Bacteria 1861
179 Ga0450893_0002733 3300042532 Bacteria 2760
180 Ga0466960_0044952 3300044901 Bacteria 2108
181 Ga0495638_0009838 3300046460 Bacteria 6675
182 Ga0495580_0170919 3300046472 Bacteria 1503
183 Ga0495630_0400356 3300046517 Bacteria 1052
184 Ga0495640_0086385 3300046533 Bacteria 2077
185 Ga0495625_0005147 3300046660 Bacteria 12070
186 Ga0495623_0035846 3300046679 Bacteria 3179
187 Ga0495660_0000004 3300046810 Bacteria 1003183
188 Ga0495674_0178143 3300047319 Bacteria 1771
189 Ga0495675_0228171 3300047444 Bacteria 1124
190 Ga0495684_0198439 3300047471 Bacteria 1480
191 Ga0495602_0309156 3300048088 Bacteria 1154
192 Ga0496100_0100687 3300048903 Bacteria 1991
193 Ga0496104_0003114 3300048907 Bacteria 14306
194 Ga0496105_0629515 3300048908 Bacteria 830
195 Ga0496106_0070905 3300048909 Bacteria 2662
196 Ga0496108_0658503 3300048911 Bacteria 910
197 Ga0496113_0247131 3300048916 Bacteria 1424
198 Ga0496115_0481360 3300048918 Bacteria 999
199 Ga0496116_0000118 3300048919 Bacteria 168946
200 Ga0496117_0010009 3300048920 Bacteria 8711
201 Ga0496117_0017280 3300048920 Bacteria 6032
202 Ga0496118_0000544 3300048921 Bacteria 61985
203 Ga0496118_0013189 3300048921 Bacteria 7838
204 Ga0496120_0031629 3300048923 Bacteria 3201
205 Ga0496121_0126665 3300048924 Bacteria 1918
206 Ga0496122_0000135 3300048925 Bacteria 170955
207 Ga0496122_0146036 3300048925 Bacteria 1470
208 Ga0496123_0000004 3300048926 Bacteria 777230
209 Ga0496124_0000004 3300048927 Bacteria 976131
210 Ga0496125_0002318 3300048928 Bacteria 25090
211 Ga0496126_0002613 3300048929 Bacteria 24000
212 Ga0496126_0070456 3300048929 Bacteria 3115
213 Ga0501032_0335354 3300049569 Bacteria 975
214 Ga0501033_0298915 3300049570 Bacteria 1134
215 Ga0501036_0119585 3300049572 Bacteria 2225
216 Ga0501037_0106679 3300049573 Bacteria 2019
217 Ga0501038_0098816 3300049574 Bacteria 2433
218 Ga0501038_0152539 3300049574 Bacteria 1883
219 Ga0501039_0188693 3300049575 Bacteria 1621
220 Ga0501046_0007283 3300049580 Bacteria 9733
221 Ga0501047_0066293 3300049581 Bacteria 3480
222 Ga0501047_0240488 3300049581 Bacteria 1661
223 Ga0501067_0002736 3300049583 Bacteria 9693
224 Ga0501067_0063563 3300049583 Bacteria 2044
225 Ga0501069_0007903 3300049585 Bacteria 5584
226 Ga0501070_0104345 3300049586 Bacteria 2344
227 Ga0501071_0007162 3300049587 Bacteria 7296
228 Ga0501072_0326879 3300049588 Bacteria 1218
229 Ga0501073_0047786 3300049589 Bacteria 3006
230 Ga0501074_0408667 3300049590 Bacteria 963
231 Ga0501075_0008215 3300049591 Bacteria 7270
232 Ga0501076_0106538 3300049592 Bacteria 2263
233 Ga0501079_0118340 3300049741 Bacteria 2059
234 Ga0501079_0291627 3300049741 Bacteria 1276
235 Ga0501080_0152224 3300049742 Bacteria 2137
236 Ga0501081_0046573 3300049743 Bacteria 2981
237 Ga0501083_0030505 3300049744 Bacteria 3704
238 Ga0501045_0019790 3300049824 Bacteria 4804
239 Ga0501045_0347175 3300049824 Bacteria 1104
240 nmdc:mga03683_24868_c1 3300050489 Bacteria 2346
241 nmdc:mga08y16_18641_c1 3300050511 Bacteria 7310
242 nmdc:mga08y16_239264_c1 3300050511 Bacteria 1877
243 nmdc:mga08y16_290061_c1 3300050511 Bacteria 1687
244 nmdc:mga0n895_255736_c1 3300050512 Bacteria 1777
245 Ga0495601_0030086 3300053077 Bacteria 3371
246 Ga0495612_0036782 3300053078 Bacteria 1987
247 Ga0495612_0170717 3300053078 Bacteria 952
248 Ga0495655_0062803 3300053083 Bacteria 1018
249 Ga0495595_0005099 3300053084 Bacteria 5308
250 Ga0495619_0004124 3300053085 Bacteria 9287
251 Ga0495619_0307990 3300053085 Bacteria 1097
252 Ga0500583_0004965 3300053092 Bacteria 4403
253 Ga0500641_0126291 3300053096 Bacteria 1103
254 Ga0500559_0078893 3300053136 Unclassified 1494
255 Ga0500568_0044509 3300053139 Bacteria 1770
256 Ga0501084_0051131 3300054114 Bacteria 3458
257 Ga0501084_0311512 3300054114 Bacteria 1329
258 Ga0501082_0029367 3300060353 Bacteria 4737
259 Ga0530510_0026170 3300061734 Bacteria 4173
260 Ga0530510_0027260 3300061734 Bacteria 4094
261 Ga0530510_0035478 3300061734 Bacteria 3594

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300054114 Ga0501084_0311512 Ga0501084_0311512_16_678 218
2 3300009094 Ga0111539_10000910 Ga0111539_1000091010 232
3 3300027907 Ga0207428_10010497 Ga0207428_100104971 232
4 3300049588 Ga0501072_0326879 Ga0501072_0326879_114_818 232
5 3300049592 Ga0501076_0106538 Ga0501076_0106538_712_1416 232
6 3300049741 Ga0501079_0291627 Ga0501079_0291627_242_946 232
7 3300049824 Ga0501045_0347175 Ga0501045_0347175_24_728 232
8 3300035113 Ga0373936_0008228 Ga0373936_0008228_1869_2612 233
9 3300053136 Ga0500559_0078893 Ga0500559_0078893_652_1395 233
10 3300032002 Ga0307416_100228425 Ga0307416_1002284251 236
11 3300005445 Ga0070708_100264604 Ga0070708_1002646042 237
12 3300005536 Ga0070697_100219560 Ga0070697_1002195602 237
13 3300039453 Ga0436362_0783703 Ga0436362_0783703_660_1415 237
14 3300044901 Ga0466960_0044952 Ga0466960_0044952_31_786 237
15 3300005338 Ga0068868_100072683 Ga0068868_1000726832 239
16 3300005367 Ga0070667_100702642 Ga0070667_1007026421 239
17 3300005544 Ga0070686_100005315 Ga0070686_1000053153 239
18 3300005548 Ga0070665_100003139 Ga0070665_1000031393 239
19 3300005843 Ga0068860_100037271 Ga0068860_1000372714 239
20 3300009177 Ga0105248_10235253 Ga0105248_102352532 239
21 3300013306 Ga0163162_10010181 Ga0163162_1001018110 239
22 3300025927 Ga0207687_10002484 Ga0207687_100024845 239
23 3300025934 Ga0207686_10009958 Ga0207686_100099584 239
24 3300025941 Ga0207711_10390973 Ga0207711_103909732 239
25 3300025942 Ga0207689_10034247 Ga0207689_100342472 239
26 3300025981 Ga0207640_10008503 Ga0207640_100085033 239
27 3300026035 Ga0207703_10086200 Ga0207703_100862002 239
28 3300026089 Ga0207648_10010563 Ga0207648_100105634 239
29 3300028379 Ga0268266_10385101 Ga0268266_103851011 239
30 3300028381 Ga0268264_10183521 Ga0268264_101835212 239
31 3300005328 Ga0070676_10226071 Ga0070676_102260712 240
32 3300005364 Ga0070673_100072390 Ga0070673_1000723903 240
33 3300009177 Ga0105248_10095865 Ga0105248_100958653 240
34 3300025907 Ga0207645_10075536 Ga0207645_100755363 240
35 3300025941 Ga0207711_10038609 Ga0207711_100386093 240
36 3300025960 Ga0207651_10076302 Ga0207651_100763022 240
37 3300026023 Ga0207677_10068946 Ga0207677_100689461 240
38 3300053139 Ga0500568_0044509 Ga0500568_0044509_979_1719 240
39 3300031456 Ga0307513_10000980 Ga0307513_1000098030 241
40 iso_pu_bacteria 2643221598 2644001749 241
41 3300009094 Ga0111539_10017525 Ga0111539_100175258 242
42 3300014326 Ga0157380_10003901 Ga0157380_100039015 242
43 3300026118 Ga0207675_100043480 Ga0207675_1000434802 242
44 3300027907 Ga0207428_10217036 Ga0207428_102170362 242
45 3300028380 Ga0268265_10445232 Ga0268265_104452322 242
46 3300048908 Ga0496105_0629515 Ga0496105_0629515_19_750 242
47 3300048925 Ga0496122_0146036 Ga0496122_0146036_97_831 242
48 3300050511 nmdc:mga08y16_18641_c1 nmdc:mga08y16_18641_c1_3674_4435 242
49 iso_pu_bacteria 2667528173 2671107044 243
50 iso_pu_bacteria 2904474040 2904475973 243
51 iso_pu_bacteria 2919150387 2919152142 243
52 iso_pu_bacteria 2927143783 2927144811 243
53 3300039062 Ga0400483_040284 Ga0400483_040284_4617_5351 244
54 3300005344 Ga0070661_100235124 Ga0070661_1002351242 245
55 3300005366 Ga0070659_100076213 Ga0070659_1000762132 245
56 3300005458 Ga0070681_10257641 Ga0070681_102576412 245
57 3300005530 Ga0070679_100072389 Ga0070679_1000723895 245
58 3300025909 Ga0207705_10077014 Ga0207705_100770142 245
59 3300025917 Ga0207660_10083636 Ga0207660_100836362 245
60 3300025920 Ga0207649_10196793 Ga0207649_101967931 245
61 3300025921 Ga0207652_10502652 Ga0207652_105026522 245
62 3300025932 Ga0207690_10099296 Ga0207690_100992962 245
63 3300035724 Ga0373933_0140990 Ga0373933_0140990_646_1389 245
64 3300036401 Ga0373937_0003193 Ga0373937_0003193_10806_11549 245
65 3300048918 Ga0496115_0481360 Ga0496115_0481360_100_843 245
66 3300050489 nmdc:mga03683_24868_c1 nmdc:mga03683_24868_c1_1562_2302 245
67 iso_pu_bacteria 2808606982 2811847773 245
68 3300005295 Ga0065707_10083265 Ga0065707_100832654 246
69 3300005329 Ga0070683_100314993 Ga0070683_1003149932 246
70 3300005535 Ga0070684_100143148 Ga0070684_1001431483 246
71 3300009098 Ga0105245_10039429 Ga0105245_100394295 246
72 3300009177 Ga0105248_10039107 Ga0105248_100391077 246
73 3300013296 Ga0157374_10070508 Ga0157374_100705082 246
74 3300013297 Ga0157378_10001465 Ga0157378_1000146511 246
75 3300013306 Ga0163162_10317273 Ga0163162_103172732 246
76 3300013306 Ga0163162_10615960 Ga0163162_106159602 246
77 3300025909 Ga0207705_10378812 Ga0207705_103788121 246
78 3300026118 Ga0207675_100003848 Ga0207675_1000038484 246
79 3300031250 Ga0265331_10025563 Ga0265331_100255633 246
80 3300031250 Ga0265331_10070516 Ga0265331_100705162 246
81 3300031251 Ga0265327_10000028 Ga0265327_10000028236 246
82 3300031456 Ga0307513_10022780 Ga0307513_100227806 246
83 3300046460 Ga0495638_0009838 Ga0495638_0009838_1967_2710 246
84 3300046660 Ga0495625_0005147 Ga0495625_0005147_2022_2765 246
85 3300048924 Ga0496121_0126665 Ga0496121_0126665_832_1575 246
86 3300048929 Ga0496126_0070456 Ga0496126_0070456_318_1061 246
87 3300049583 Ga0501067_0002736 Ga0501067_0002736_6751_7494 246
88 3300049585 Ga0501069_0007903 Ga0501069_0007903_3752_4495 246
89 3300053092 Ga0500583_0004965 Ga0500583_0004965_3647_4390 246
90 3300053096 Ga0500641_0126291 Ga0500641_0126291_158_901 246
91 3300061734 Ga0530510_0027260 Ga0530510_0027260_824_1567 246
92 iso_pu_bacteria 2643221548 2643759463 246
93 iso_pu_bacteria 2643221682 2644463121 246
94 3300002737 JGI25162J39368_1000002 JGI25162J39368_1000002448 247
95 3300002771 JGI25163J39215_1000137 JGI25163J39215_10001374 247
96 3300002772 JGI25164J39214_1000098 JGI25164J39214_100009855 247
97 3300003203 JGI25406J46586_10001102 JGI25406J46586_100011025 247
98 3300003751 Ga0055538_1000003 Ga0055538_1000003448 247
99 3300003752 Ga0055539_1000003 Ga0055539_1000003172 247
100 3300003756 Ga0055533_1000005 Ga0055533_1000005172 247
101 3300003759 Ga0055525_1000005 Ga0055525_1000005448 247
102 3300003841 Ga0055541_1000003 Ga0055541_1000003448 247
103 3300005289 Ga0065704_10000732 Ga0065704_1000073219 247
104 3300005329 Ga0070683_100398486 Ga0070683_1003984861 247
105 3300005330 Ga0070690_100222379 Ga0070690_1002223791 247
106 3300005331 Ga0070670_100617703 Ga0070670_1006177031 247
107 3300005335 Ga0070666_10063240 Ga0070666_100632404 247
108 3300005338 Ga0068868_100002632 Ga0068868_1000026329 247
109 3300005340 Ga0070689_100007276 Ga0070689_1000072762 247
110 3300005364 Ga0070673_100482784 Ga0070673_1004827842 247
111 3300005367 Ga0070667_100281605 Ga0070667_1002816052 247
112 3300005435 Ga0070714_100176108 Ga0070714_1001761082 247
113 3300005441 Ga0070700_100363195 Ga0070700_1003631952 247
114 3300005458 Ga0070681_10352733 Ga0070681_103527332 247
115 3300005458 Ga0070681_10415957 Ga0070681_104159572 247
116 3300005459 Ga0068867_100000042 Ga0068867_10000004243 247
117 3300005459 Ga0068867_100268248 Ga0068867_1002682482 247
118 3300005530 Ga0070679_100037350 Ga0070679_1000373502 247
119 3300005544 Ga0070686_100321916 Ga0070686_1003219162 247
120 3300005563 Ga0068855_100642730 Ga0068855_1006427302 247
121 3300005614 Ga0068856_100122328 Ga0068856_1001223282 247
122 3300005614 Ga0068856_100220781 Ga0068856_1002207812 247
123 3300005616 Ga0068852_100096294 Ga0068852_1000962943 247
124 3300005617 Ga0068859_100069652 Ga0068859_1000696523 247
125 3300005617 Ga0068859_100532197 Ga0068859_1005321972 247
126 3300005618 Ga0068864_100187295 Ga0068864_1001872952 247
127 3300005618 Ga0068864_100264852 Ga0068864_1002648522 247
128 3300005841 Ga0068863_100046904 Ga0068863_1000469043 247
129 3300005841 Ga0068863_100075297 Ga0068863_1000752973 247
130 3300005842 Ga0068858_100034440 Ga0068858_1000344404 247
131 3300005842 Ga0068858_100566490 Ga0068858_1005664902 247
132 3300005843 Ga0068860_100087497 Ga0068860_1000874972 247
133 3300005981 Ga0081538_10002821 Ga0081538_100028212 247
134 3300005985 Ga0081539_10000240 Ga0081539_100002409 247
135 3300006237 Ga0097621_100008486 Ga0097621_1000084864 247
136 3300006358 Ga0068871_100013065 Ga0068871_1000130654 247
137 3300006871 Ga0075434_100281922 Ga0075434_1002819222 247
138 3300006881 Ga0068865_100012639 Ga0068865_1000126393 247
139 3300006931 Ga0097620_100069653 Ga0097620_1000696532 247
140 3300006931 Ga0097620_100532228 Ga0097620_1005322282 247
141 3300009092 Ga0105250_10000007 Ga0105250_10000007102 247
142 3300009092 Ga0105250_10000233 Ga0105250_1000023324 247
143 3300009094 Ga0111539_10021562 Ga0111539_100215626 247
144 3300009148 Ga0105243_10159494 Ga0105243_101594943 247
145 3300009177 Ga0105248_10306537 Ga0105248_103065372 247
146 3300009545 Ga0105237_10097863 Ga0105237_100978632 247
147 3300009551 Ga0105238_10002927 Ga0105238_1000292710 247
148 3300010375 Ga0105239_10028728 Ga0105239_100287286 247
149 3300010375 Ga0105239_10552247 Ga0105239_105522472 247
150 3300013102 Ga0157371_10000006 Ga0157371_10000006200 247
151 3300013104 Ga0157370_10001569 Ga0157370_100015695 247
152 3300013296 Ga0157374_10077255 Ga0157374_100772552 247
153 3300013308 Ga0157375_11087706 Ga0157375_110877061 247
154 3300014325 Ga0163163_10016965 Ga0163163_100169655 247
155 3300014745 Ga0157377_10000038 Ga0157377_1000003842 247
156 3300021320 Ga0214544_1001716 Ga0214544_100171636 247
157 3300021321 Ga0214542_1000082 Ga0214542_10000829 247
158 3300021327 Ga0214543_1000075 Ga0214543_10000759 247
159 3300022467 Ga0224712_10007231 Ga0224712_100072314 247
160 3300025207 Ga0209760_100138 Ga0209760_10013823 247
161 3300025224 Ga0209784_100001 Ga0209784_1000012932 247
162 3300025225 Ga0209566_100001 Ga0209566_1000012932 247
163 3300025226 Ga0209674_100002 Ga0209674_1000022932 247
164 3300025230 Ga0209563_100002 Ga0209563_1000021467 247
165 3300025231 Ga0207427_100009 Ga0207427_100009441 247
166 3300025233 Ga0209437_100001 Ga0209437_1000011467 247
167 3300025253 Ga0209677_100002 Ga0209677_1000021467 247
168 3300025261 Ga0209233_1011822 Ga0209233_10118222 247
169 3300025711 Ga0207696_1000029 Ga0207696_1000029138 247
170 3300025711 Ga0207696_1000296 Ga0207696_100029618 247
171 3300025728 Ga0207655_1000359 Ga0207655_100035935 247
172 3300025901 Ga0207688_10051476 Ga0207688_100514761 247
173 3300025903 Ga0207680_10205868 Ga0207680_102058682 247
174 3300025912 Ga0207707_10005486 Ga0207707_100054867 247
175 3300025917 Ga0207660_10426316 Ga0207660_104263161 247
176 3300025918 Ga0207662_10091122 Ga0207662_100911222 247
177 3300025921 Ga0207652_10001336 Ga0207652_100013366 247
178 3300025924 Ga0207694_10000216 Ga0207694_100002162 247
179 3300025925 Ga0207650_10423880 Ga0207650_104238801 247
180 3300025927 Ga0207687_10060280 Ga0207687_100602803 247
181 3300025929 Ga0207664_10201489 Ga0207664_102014891 247
182 3300025934 Ga0207686_10026698 Ga0207686_100266983 247
183 3300025935 Ga0207709_10211711 Ga0207709_102117112 247
184 3300025936 Ga0207670_10021080 Ga0207670_100210802 247
185 3300025936 Ga0207670_10195253 Ga0207670_101952531 247
186 3300025937 Ga0207669_10582586 Ga0207669_105825862 247
187 3300025941 Ga0207711_10114798 Ga0207711_101147982 247
188 3300025942 Ga0207689_10295918 Ga0207689_102959182 247
189 3300025986 Ga0207658_10512055 Ga0207658_105120552 247
190 3300026088 Ga0207641_10007863 Ga0207641_100078631 247
191 3300026088 Ga0207641_10055663 Ga0207641_100556633 247
192 3300026089 Ga0207648_10000118 Ga0207648_1000011842 247
193 3300026089 Ga0207648_10101716 Ga0207648_101017161 247
194 3300026095 Ga0207676_10190782 Ga0207676_101907822 247
195 3300026095 Ga0207676_10269571 Ga0207676_102695712 247
196 3300026142 Ga0207698_10072185 Ga0207698_100721853 247
197 3300027907 Ga0207428_10156769 Ga0207428_101567692 247
198 3300028379 Ga0268266_10000127 Ga0268266_1000012742 247
199 3300031711 Ga0265314_10211825 Ga0265314_102118252 247
200 3300031730 Ga0307516_10001430 Ga0307516_1000143014 247
201 3300031824 Ga0307413_10423641 Ga0307413_104236412 247
202 3300035691 Ga0373931_0172978 Ga0373931_0172978_298_1056 247
203 3300037418 Ga0395900_0172242 Ga0395900_0172242_1375_2133 247
204 3300037418 Ga0395900_0393462 Ga0395900_0393462_200_961 247
205 3300037418 Ga0395900_0495911 Ga0395900_0495911_287_1087 247
206 3300037466 Ga0395898_0133108 Ga0395898_0133108_490_1239 247
207 3300037466 Ga0395898_0787343 Ga0395898_0787343_120_881 247
208 3300038443 Ga0395901_0150069 Ga0395901_0150069_128_928 247
209 3300042532 Ga0450893_0002733 Ga0450893_0002733_740_1483 247
210 3300046472 Ga0495580_0170919 Ga0495580_0170919_273_1031 247
211 3300046517 Ga0495630_0400356 Ga0495630_0400356_87_845 247
212 3300046533 Ga0495640_0086385 Ga0495640_0086385_684_1442 247
213 3300046679 Ga0495623_0035846 Ga0495623_0035846_2374_3135 247
214 3300046810 Ga0495660_0000004 Ga0495660_0000004_384119_384862 247
215 3300047319 Ga0495674_0178143 Ga0495674_0178143_437_1195 247
216 3300047444 Ga0495675_0228171 Ga0495675_0228171_240_1001 247
217 3300047471 Ga0495684_0198439 Ga0495684_0198439_262_1020 247
218 3300048088 Ga0495602_0309156 Ga0495602_0309156_191_949 247
219 3300048903 Ga0496100_0100687 Ga0496100_0100687_568_1323 247
220 3300048907 Ga0496104_0003114 Ga0496104_0003114_6784_7527 247
221 3300048909 Ga0496106_0070905 Ga0496106_0070905_152_907 247
222 3300048911 Ga0496108_0658503 Ga0496108_0658503_10_765 247
223 3300048916 Ga0496113_0247131 Ga0496113_0247131_109_864 247
224 3300048919 Ga0496116_0000118 Ga0496116_0000118_18477_19220 247
225 3300048920 Ga0496117_0010009 Ga0496117_0010009_3823_4566 247
226 3300048920 Ga0496117_0017280 Ga0496117_0017280_1149_1892 247
227 3300048921 Ga0496118_0000544 Ga0496118_0000544_48258_49001 247
228 3300048921 Ga0496118_0013189 Ga0496118_0013189_3618_4361 247
229 3300048923 Ga0496120_0031629 Ga0496120_0031629_251_994 247
230 3300048925 Ga0496122_0000135 Ga0496122_0000135_16447_17190 247
231 3300048926 Ga0496123_0000004 Ga0496123_0000004_16355_17098 247
232 3300048927 Ga0496124_0000004 Ga0496124_0000004_780838_781701 247
233 3300048928 Ga0496125_0002318 Ga0496125_0002318_18297_19040 247
234 3300048929 Ga0496126_0002613 Ga0496126_0002613_19399_20142 247
235 3300049569 Ga0501032_0335354 Ga0501032_0335354_141_926 247
236 3300049570 Ga0501033_0298915 Ga0501033_0298915_97_882 247
237 3300049572 Ga0501036_0119585 Ga0501036_0119585_309_1067 247
238 3300049573 Ga0501037_0106679 Ga0501037_0106679_1145_1930 247
239 3300049574 Ga0501038_0098816 Ga0501038_0098816_884_1669 247
240 3300049574 Ga0501038_0152539 Ga0501038_0152539_401_1159 247
241 3300049575 Ga0501039_0188693 Ga0501039_0188693_633_1391 247
242 3300049580 Ga0501046_0007283 Ga0501046_0007283_6719_7480 247
243 3300049581 Ga0501047_0066293 Ga0501047_0066293_2488_3249 247
244 3300049581 Ga0501047_0240488 Ga0501047_0240488_211_1113 247
245 3300049583 Ga0501067_0063563 Ga0501067_0063563_397_1182 247
246 3300049586 Ga0501070_0104345 Ga0501070_0104345_635_1420 247
247 3300049587 Ga0501071_0007162 Ga0501071_0007162_1233_1991 247
248 3300049589 Ga0501073_0047786 Ga0501073_0047786_1553_2338 247
249 3300049590 Ga0501074_0408667 Ga0501074_0408667_25_783 247
250 3300049591 Ga0501075_0008215 Ga0501075_0008215_1428_2186 247
251 3300049741 Ga0501079_0118340 Ga0501079_0118340_223_981 247
252 3300049742 Ga0501080_0152224 Ga0501080_0152224_416_1201 247
253 3300049743 Ga0501081_0046573 Ga0501081_0046573_1616_2374 247
254 3300049744 Ga0501083_0030505 Ga0501083_0030505_891_1676 247
255 3300049824 Ga0501045_0019790 Ga0501045_0019790_537_1295 247
256 3300050511 nmdc:mga08y16_239264_c1 nmdc:mga08y16_239264_c1_177_932 247
257 3300050511 nmdc:mga08y16_290061_c1 nmdc:mga08y16_290061_c1_99_857 247
258 3300050512 nmdc:mga0n895_255736_c1 nmdc:mga0n895_255736_c1_739_1497 247
259 3300053077 Ga0495601_0030086 Ga0495601_0030086_2483_3241 247
260 3300053078 Ga0495612_0036782 Ga0495612_0036782_755_1504 247
261 3300053078 Ga0495612_0170717 Ga0495612_0170717_70_828 247
262 3300053083 Ga0495655_0062803 Ga0495655_0062803_223_981 247
263 3300053084 Ga0495595_0005099 Ga0495595_0005099_3811_4569 247
264 3300053085 Ga0495619_0004124 Ga0495619_0004124_5120_5878 247
265 3300053085 Ga0495619_0307990 Ga0495619_0307990_135_887 247
266 3300054114 Ga0501084_0051131 Ga0501084_0051131_1187_1945 247
267 3300060353 Ga0501082_0029367 Ga0501082_0029367_1894_2652 247
268 3300061734 Ga0530510_0026170 Ga0530510_0026170_117_875 247
269 3300061734 Ga0530510_0035478 Ga0530510_0035478_2003_2761 247
270 iso_pu_bacteria 2585427591 2585827785 247
271 iso_pu_bacteria 2585427592 2585834662 247
272 iso_pu_bacteria 2857542790 2857547301 247
273 iso_pu_bacteria 2904504865 2904506371 247
274 iso_pu_bacteria 2929199973 2929203291 247
275 iso_pu_bacteria 8055909800 8055910592 247

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

54

250

0.98

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

60

279

0.88

PF08643

DUF1776

Fungal family of unknown function (DUF1776)

139

257

0.85

PF08659

KR

KR domain

55

224

0.8

PF23441

50

294

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
4dry-assembly1.cif.gz_D the crystal structure of 3-oxoacyl-[acyl-carrier-protein] reductase from rhizobium meliloti 0.9693 3 247
4dry-assembly1.cif.gz_A the crystal structure of 3-oxoacyl-[acyl-carrier-protein] reductase from rhizobium meliloti 0.9617 3 247
4dry-assembly1.cif.gz_D the crystal structure of 3-oxoacyl-[acyl-carrier-protein] reductase from rhizobium meliloti 0.9578 3 247
4dry-assembly1.cif.gz_A the crystal structure of 3-oxoacyl-[acyl-carrier-protein] reductase from rhizobium meliloti 0.9578 3 247
4dyv-assembly1.cif.gz_A crystal structure of a short-chain dehydrogenase/reductase sdr from xanthobacter autotrophicus py2 0.9449 3 239
ID Description Score Start End Superfamily
4dryA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9544 3 247 3.40.50.720
af_Q6PKH6_18_219_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9515 1 179 3.40.50.720
4dryA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9504 3 247 3.40.50.720
4dyvA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9431 3 238 3.40.50.720
5itvD00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9406 3 237 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A6N8Y7V8-F1-model_v4 deleted 0.9817 2 247
AF-A0A258ECM8-F1-model_v4 3-oxoacyl-ACP reductase 0.9786 1 226 GO:0016491
AF-A0A6N8Y7V8-F1-model_v4 deleted 0.9739 2 247
AF-A0A258ECM8-F1-model_v4 3-oxoacyl-ACP reductase 0.9699 1 226 GO:0016491
AF-A0A7X9KMP4-F1-model_v4 SDR family oxidoreductase 0.9691 82 195 GO:0006633
GO:0016616
GO:0048038

Feature Viewer

pLDDT pTM Quality
93.06 0.92 High
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Predicted Structure (AlphaFold2)

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