F380366

General Info

Members Datasets Scaffolds Average Seq Length
275 178 550 417

Family's Representative Sequence

Representative Sequence 3300007788|Ga0099795_10019903|Ga0099795_100199032
Length 461
Sequence MSFAGYTQSLKDKLRIDSKRQGWSALTKFTNVTAEAGMRIEIICTGDEILTGKTVNTNFSHISRKLEEVGLSVSWGTTVGDDRDTLLEAFRLAGDRGDAVIVNGGLGPTVDDLSQEIAAKAAGVNLVLNEHWLERIEALFRRYNLVMQPNNRKQALLPATAEIIDNPIGTACGFELTIGRASFYFTPGVPKELHLMLDAEVIPRLLARSGTATISRVKRFHSFGLGESHADSLLEGIEGLAPNRGVKLGFQSHFPQLETKLALRGADPAELARRLLPIEAEVRKRLGNFIVAEDDDTLEGIILAALKRKRASLSVVETFTGGRIAARLAAHPDAESVFRRGLVAQAGSEIEALLNLAVGTLSSGPLTEKAIKDAACATLLVTHSTYALVALADRDKIADPTGCSPTLWFSIATRQQVAVRSSRLLRFGDKEILRAGAVEMGLDSLRRFLQGLPVEEKNDFG

Samples

Sample ID Description Type Environment
1 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
2 3300004801 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
5 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
9 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
10 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
21 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
22 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
29 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
30 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
33 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
34 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
35 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
36 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
37 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
38 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
39 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
40 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
41 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
42 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
43 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
44 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
45 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
46 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
47 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
48 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
49 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
50 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
51 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
52 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
53 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
54 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
55 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
56 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
58 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
59 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
61 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
62 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
63 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
64 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
65 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
66 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
67 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
68 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
69 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
70 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
71 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
72 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
73 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
101 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
105 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
106 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
107 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
108 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
109 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
110 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
111 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
112 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
113 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
114 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
115 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
116 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
117 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
118 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
119 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
120 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
121 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
122 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
123 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
124 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
125 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
126 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
127 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
128 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
129 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
130 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
131 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
132 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
133 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
134 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
135 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
136 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
137 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
138 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
139 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
140 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
141 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
142 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
143 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
144 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
145 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
146 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
147 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
148 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
149 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
150 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
151 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
155 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
156 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
157 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
158 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
159 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
160 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
161 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
162 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
163 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
164 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
165 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
166 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
167 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
168 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
169 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
170 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
171 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
172 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
173 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
174 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
175 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
176 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
177 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
178 3300053733 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.64
Metatranscriptomes 0.36
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.64
Nodule 0
Rhizoplane 1.09
Rhizosphere 89.45
Stem 0
Stem Tuber 0
Unclassified 4

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0099795_10019903 3300007788 Bacteria 2178
2 Ga0058860_12081760 3300004801 Unclassified 1782
3 Ga0070680_100039327 3300005336 Bacteria 3828
4 Ga0070680_100213528 3300005336 Bacteria 1628
5 Ga0070669_100085314 3300005353 Bacteria 2358
6 Ga0070709_10043396 3300005434 Bacteria 2780
7 Ga0070709_10083602 3300005434 Bacteria 2088
8 Ga0070714_100010342 3300005435 Bacteria 7373
9 Ga0070713_100009006 3300005436 Bacteria 7116
10 Ga0070713_100275421 3300005436 Bacteria 1542
11 Ga0070710_10073794 3300005437 Bacteria 1973
12 Ga0070711_100013151 3300005439 Bacteria 5191
13 Ga0070705_100127492 3300005440 Bacteria 1654
14 Ga0070708_100004914 3300005445 Bacteria 10563
15 Ga0070681_10050964 3300005458 Bacteria 4129
16 Ga0070706_100025460 3300005467 Bacteria 5446
17 Ga0070706_100133892 3300005467 Bacteria 2313
18 Ga0070706_100160871 3300005467 Bacteria 2096
19 Ga0070706_100170172 3300005467 Unclassified 2034
20 Ga0070707_100009165 3300005468 Bacteria 9182
21 Ga0070707_100068983 3300005468 Bacteria 3404
22 Ga0070707_100220341 3300005468 Unclassified 1848
23 Ga0070698_100002264 3300005471 Bacteria 21292
24 Ga0070698_100039850 3300005471 Bacteria 4831
25 Ga0070698_100100655 3300005471 Unclassified 2862
26 Ga0070699_100012929 3300005518 Bacteria 7196
27 Ga0070699_100031730 3300005518 Bacteria 4561
28 Ga0070699_100052796 3300005518 Bacteria 3517
29 Ga0070679_100156211 3300005530 Bacteria 2256
30 Ga0070697_100027000 3300005536 Bacteria 4591
31 Ga0068853_100007223 3300005539 Bacteria 8898
32 Ga0068853_100021111 3300005539 Bacteria 5422
33 Ga0070672_100047904 3300005543 Bacteria 3318
34 Ga0070686_100023850 3300005544 Bacteria 3662
35 Ga0070695_100092645 3300005545 Bacteria 2020
36 Ga0070665_100018397 3300005548 Bacteria 7003
37 Ga0070704_100032588 3300005549 Bacteria 3516
38 Ga0068855_100336587 3300005563 Bacteria 1665
39 Ga0068857_100055154 3300005577 Bacteria 3527
40 Ga0068857_100075364 3300005577 Bacteria 3008
41 Ga0068859_100020386 3300005617 Bacteria 6655
42 Ga0068866_10080255 3300005718 Bacteria 1750
43 Ga0068861_100119067 3300005719 Bacteria 2128
44 Ga0068870_10081882 3300005840 Bacteria 1786
45 Ga0068860_100052987 3300005843 Bacteria 3858
46 Ga0068862_100014175 3300005844 Bacteria 6609
47 Ga0068862_100054824 3300005844 Bacteria 3413
48 Ga0068862_100215309 3300005844 Bacteria 1737
49 Ga0081455_10005889 3300005937 Bacteria 13317
50 Ga0081455_10033227 3300005937 Unclassified 4638
51 Ga0081538_10001248 3300005981 Bacteria 26556
52 Ga0081538_10009231 3300005981 Bacteria 8261
53 Ga0081538_10018595 3300005981 Bacteria 5209
54 Ga0081540_1044415 3300005983 Bacteria 2268
55 Ga0081539_10000830 3300005985 Bacteria 59681
56 Ga0070717_10016772 3300006028 Bacteria 5685
57 Ga0070717_10100559 3300006028 Bacteria 2455
58 Ga0075365_10048249 3300006038 Bacteria 2802
59 Ga0075365_10074363 3300006038 Bacteria 2291
60 Ga0070716_100063078 3300006173 Bacteria 2150
61 Ga0070712_100009537 3300006175 Bacteria 6122
62 Ga0070712_100043926 3300006175 Bacteria 3079
63 Ga0075362_10020507 3300006177 Bacteria 2762
64 Ga0075362_10038650 3300006177 Bacteria 2096
65 Ga0075367_10003972 3300006178 Bacteria 7139
66 Ga0075369_10003222 3300006186 Bacteria 5924
67 Ga0075369_10005310 3300006186 Bacteria 4802
68 Ga0075366_10003474 3300006195 Bacteria 8321
69 Ga0075366_10096812 3300006195 Bacteria 1770
70 Ga0075370_10035863 3300006353 Bacteria 2784
71 Ga0075370_10081035 3300006353 Bacteria 1866
72 Ga0075428_100005100 3300006844 Bacteria 14597
73 Ga0075428_100006619 3300006844 Bacteria 12892
74 Ga0075430_100000104 3300006846 Bacteria 50931
75 Ga0075430_100050110 3300006846 Bacteria 3523
76 Ga0075431_100002797 3300006847 Bacteria 16910
77 Ga0075431_100007526 3300006847 Bacteria 10842
78 Ga0075431_100029267 3300006847 Bacteria 5667
79 Ga0075433_10007389 3300006852 Bacteria 8721
80 Ga0075433_10017154 3300006852 Bacteria 5990
81 Ga0075434_100010879 3300006871 Bacteria 8554
82 Ga0075434_100012360 3300006871 Bacteria 8089
83 Ga0075434_100017537 3300006871 Bacteria 6901
84 Ga0075434_100022145 3300006871 Bacteria 6189
85 Ga0075434_100221764 3300006871 Bacteria 1911
86 Ga0075429_100002837 3300006880 Bacteria 14659
87 Ga0075429_100005732 3300006880 Bacteria 10717
88 Ga0075436_100015581 3300006914 Bacteria 5204
89 Ga0097620_100020389 3300006931 Bacteria 6655
90 Ga0075435_100014234 3300007076 Bacteria 5940
91 Ga0075435_100057738 3300007076 Bacteria 3140
92 Ga0075435_100249249 3300007076 Bacteria 1512
93 Ga0099795_10001634 3300007788 Bacteria 4955
94 Ga0105240_10035880 3300009093 Bacteria 6385
95 Ga0105240_10105075 3300009093 Unclassified 3428
96 Ga0111539_10002748 3300009094 Bacteria 23349
97 Ga0111539_10091960 3300009094 Bacteria 3565
98 Ga0111539_10225300 3300009094 Bacteria 2184
99 Ga0111539_10288366 3300009094 Bacteria 1910
100 Ga0105245_10092253 3300009098 Bacteria 2789
101 Ga0105247_10124478 3300009101 Bacteria 1674
102 Ga0114129_10046663 3300009147 Bacteria 6088
103 Ga0114129_10067087 3300009147 Bacteria 5004
104 Ga0114129_10077468 3300009147 Bacteria 4624
105 Ga0105241_10021687 3300009174 Bacteria 4752
106 Ga0105241_10110948 3300009174 Bacteria 2195
107 Ga0105242_10055429 3300009176 Bacteria 3243
108 Ga0105248_10032442 3300009177 Bacteria 5837
109 Ga0105237_10025251 3300009545 Bacteria 6077
110 Ga0105249_10046782 3300009553 Bacteria 3939
111 Ga0105239_10268849 3300010375 Bacteria 1917
112 Ga0157371_10078227 3300013102 Bacteria 2343
113 Ga0163162_10308620 3300013306 Bacteria 1714
114 Ga0157375_10200745 3300013308 Bacteria 2150
115 Ga0163163_10006895 3300014325 Bacteria 9971
116 Ga0182008_10006826 3300014497 Bacteria 6350
117 Ga0213875_10002325 3300021388 Bacteria 11502
118 Ga0213871_10001616 3300021441 Bacteria 3849
119 Ga0207692_10027377 3300025898 Bacteria 2686
120 Ga0207642_10072185 3300025899 Bacteria 1646
121 Ga0207688_10034695 3300025901 Bacteria 2795
122 Ga0207684_10080091 3300025910 Bacteria 2778
123 Ga0207684_10091193 3300025910 Bacteria 2597
124 Ga0207684_10189029 3300025910 Unclassified 1776
125 Ga0207654_10036304 3300025911 Bacteria 2752
126 Ga0207695_10202302 3300025913 Unclassified 1899
127 Ga0207671_10044222 3300025914 Bacteria 3293
128 Ga0207693_10006362 3300025915 Bacteria 9785
129 Ga0207693_10017986 3300025915 Bacteria 5633
130 Ga0207693_10080075 3300025915 Bacteria 2557
131 Ga0207663_10008716 3300025916 Bacteria 5324
132 Ga0207663_10146805 3300025916 Bacteria 1650
133 Ga0207660_10031737 3300025917 Bacteria 3642
134 Ga0207652_10014990 3300025921 Bacteria 6288
135 Ga0207646_10013969 3300025922 Bacteria 7650
136 Ga0207646_10018992 3300025922 Bacteria 6400
137 Ga0207646_10033274 3300025922 Bacteria 4664
138 Ga0207646_10046956 3300025922 Bacteria 3874
139 Ga0207646_10142293 3300025922 Bacteria 2161
140 Ga0207646_10308809 3300025922 Unclassified 1429
141 Ga0207681_10235745 3300025923 Bacteria 1422
142 Ga0207700_10085116 3300025928 Bacteria 2481
143 Ga0207664_10014173 3300025929 Bacteria 5749
144 Ga0207669_10088640 3300025937 Bacteria 2007
145 Ga0207665_10027661 3300025939 Bacteria 3747
146 Ga0207665_10156321 3300025939 Bacteria 1637
147 Ga0207691_10089645 3300025940 Bacteria 2757
148 Ga0207711_10083013 3300025941 Bacteria 2802
149 Ga0207711_10171498 3300025941 Bacteria 1969
150 Ga0207689_10026103 3300025942 Bacteria 4891
151 Ga0207712_10063141 3300025961 Bacteria 2636
152 Ga0207639_10015336 3300026041 Bacteria 5405
153 Ga0207639_10016026 3300026041 Bacteria 5294
154 Ga0207678_10076853 3300026067 Bacteria 2860
155 Ga0207702_10159497 3300026078 Bacteria 2059
156 Ga0207641_10152026 3300026088 Bacteria 2097
157 Ga0207674_10005978 3300026116 Bacteria 14408
158 Ga0207675_100147930 3300026118 Bacteria 2234
159 Ga0207675_100204196 3300026118 Bacteria 1899
160 Ga0207428_10006690 3300027907 Bacteria 10586
161 Ga0207428_10031261 3300027907 Bacteria 4396
162 Ga0268266_10124741 3300028379 Bacteria 2296
163 Ga0268265_10044119 3300028380 Bacteria 3318
164 Ga0268265_10069283 3300028380 Bacteria 2738
165 Ga0268265_10196710 3300028380 Bacteria 1745
166 Ga0268265_10266904 3300028380 Bacteria 1525
167 Ga0268264_10116210 3300028381 Bacteria 2351
168 Ga0268264_10212228 3300028381 Bacteria 1778
169 Ga0265337_1011677 3300028556 Bacteria 3016
170 Ga0265338_10007183 3300028800 Bacteria 13939
171 Ga0265338_10150248 3300028800 Bacteria 1811
172 Ga0307406_10081043 3300031901 Bacteria 2157
173 Ga0307416_100005558 3300032002 Bacteria 7761
174 Ga0307411_10022647 3300032005 Bacteria 3704
175 Ga0373954_0001893 3300035118 Bacteria 8640
176 Ga0373942_0025889 3300035207 Bacteria 1515
177 Ga0373924_0037477 3300035410 Bacteria 1975
178 Ga0373931_0002465 3300035691 Bacteria 8198
179 Ga0373931_0149762 3300035691 Bacteria 1359
180 Ga0373935_0093724 3300035692 Bacteria 1970
181 Ga0373933_0002645 3300035724 Bacteria 10030
182 Ga0373947_0046621 3300035725 Bacteria 2596
183 Ga0373937_0006967 3300036401 Bacteria 9758
184 Ga0373937_0095548 3300036401 Bacteria 2755
185 Ga0373937_0256228 3300036401 Bacteria 1649
186 Ga0373925_0204602 3300037068 Bacteria 1571
187 Ga0395899_0083403 3300037312 Bacteria 2324
188 Ga0395900_0003055 3300037418 Bacteria 18227
189 Ga0395898_0007732 3300037466 Bacteria 11413
190 Ga0436364_0082987 3300037853 Bacteria 54429
191 Ga0395901_0001797 3300038443 Bacteria 22134
192 Ga0436365_1050828 3300039437 Unclassified 2051
193 Ga0436360_0051491 3300039438 Bacteria 8788
194 Ga0436360_0237038 3300039438 Bacteria 9324
195 Ga0436360_0482011 3300039438 Bacteria 5671
196 Ga0436360_1310161 3300039438 Bacteria 1874
197 Ga0436361_0636899 3300039447 Bacteria 7700
198 Ga0436362_0217576 3300039453 Bacteria 5641
199 Ga0436362_0802619 3300039453 Bacteria 1691
200 Ga0451577_0015182 3300042876 Bacteria 7166
201 Ga0451577_0066655 3300042876 Bacteria 3211
202 Ga0453683_0006408 3300044673 Bacteria 8078
203 Ga0466963_0035578 3300044694 Bacteria 3245
204 Ga0453684_0011989 3300044712 Bacteria 14418
205 Ga0451576_0029099 3300045051 Bacteria 5912
206 Ga0466967_0081803 3300045976 Bacteria 2917
207 Ga0495651_0136909 3300046462 Bacteria 1780
208 Ga0495580_0002649 3300046472 Bacteria 15549
209 Ga0495580_0042179 3300046472 Bacteria 3252
210 Ga0495664_0008279 3300046477 Bacteria 5796
211 Ga0495587_0027835 3300046536 Bacteria 3441
212 Ga0495645_0048267 3300046543 Bacteria 3101
213 Ga0495667_0002286 3300046559 Bacteria 12844
214 Ga0495667_0003744 3300046559 Bacteria 10229
215 Ga0495659_0028516 3300046664 Bacteria 1933
216 Ga0495599_0006109 3300046678 Bacteria 7253
217 Ga0495646_0035876 3300046680 Bacteria 3073
218 Ga0495674_0006242 3300047319 Bacteria 11435
219 Ga0495680_0161961 3300047322 Bacteria 1624
220 Ga0495675_0006698 3300047444 Bacteria 7061
221 Ga0495684_0049293 3300047471 Bacteria 3218
222 Ga0495602_0001266 3300048088 Bacteria 24916
223 Ga0496102_0033785 3300048905 Bacteria 4599
224 Ga0496103_0152127 3300048906 Bacteria 1482
225 Ga0496112_0050000 3300048915 Bacteria 4098
226 Ga0496126_0047058 3300048929 Bacteria 3951
227 Ga0501037_0014003 3300049573 Bacteria 5908
228 Ga0501040_0068701 3300049576 Bacteria 2444
229 Ga0501043_0036456 3300049579 Bacteria 3869
230 Ga0501067_0112345 3300049583 Bacteria 1515
231 Ga0501070_0082979 3300049586 Bacteria 2653
232 Ga0501072_0046445 3300049588 Bacteria 3418
233 Ga0501076_0036807 3300049592 Bacteria 3836
234 Ga0501044_0025883 3300049823 Bacteria 6219
235 nmdc:mga03683_678_c1 3300050489 Bacteria 9803
236 nmdc:mga0yw44_123935_c1 3300050492 Bacteria 1667
237 nmdc:mga0yw44_51004_c1 3300050492 Bacteria 2504
238 nmdc:mga06z11_11118_c1 3300050494 Bacteria 3868
239 nmdc:mga07m45_13388_c1 3300050496 Bacteria 4352
240 nmdc:mga05p37_1276_c1 3300050507 Bacteria 27574
241 nmdc:mga05p37_281429_c1 3300050507 Bacteria 1983
242 nmdc:mga05p37_32968_c1 3300050507 Bacteria 6342
243 nmdc:mga05p37_41058_c1 3300050507 Bacteria 5681
244 nmdc:mga09592_2187_c1 3300050508 Bacteria 15755
245 nmdc:mga09592_2326_c1 3300050508 Bacteria 15337
246 nmdc:mga09592_262992_c1 3300050508 Bacteria 1496
247 nmdc:mga0qj67_788_c1 3300050509 Bacteria 21551
248 nmdc:mga06r32_102883_c1 3300050510 Bacteria 2804
249 nmdc:mga06r32_1553_c1 3300050510 Bacteria 20696
250 nmdc:mga06r32_18977_c1 3300050510 Bacteria 6305
251 nmdc:mga06r32_205_c1 3300050510 Bacteria 47453
252 nmdc:mga08y16_24233_c1 3300050511 Bacteria 6407
253 nmdc:mga08y16_257474_c1 3300050511 Bacteria 1802
254 nmdc:mga08y16_6236_c1 3300050511 Bacteria 12503
255 nmdc:mga0n895_14350_c1 3300050512 Bacteria 7193
256 nmdc:mga0n895_20113_c1 3300050512 Bacteria 6218
257 nmdc:mga0n895_42508_c1 3300050512 Bacteria 4421
258 nmdc:mga0n895_58513_c1 3300050512 Bacteria 3800
259 nmdc:mga0rr50_59237_c1 3300050513 Bacteria 2874
260 nmdc:mga0rr50_98322_c1 3300050513 Bacteria 2294
261 nmdc:mga0a205_116185_c1 3300050515 Bacteria 2574
262 nmdc:mga0a205_1366_c1 3300050515 Bacteria 20598
263 nmdc:mga0a205_1637_c2 3300050515 Bacteria 9482
264 nmdc:mga0a205_35198_c1 3300050515 Bacteria 4808
265 nmdc:mga0a205_49164_c1 3300050515 Bacteria 4070
266 nmdc:mga0a205_66141_c1 3300050515 Bacteria 3493
267 nmdc:mga0sz30_16313_c1 3300050516 Bacteria 2948
268 nmdc:mga0sz30_6147_c1 3300050516 Bacteria 4446
269 Ga0495601_0011024 3300053077 Bacteria 5400
270 Ga0495612_0001376 3300053078 Bacteria 10034
271 Ga0495595_0034971 3300053084 Bacteria 2275
272 Ga0495619_0075792 3300053085 Unclassified 2257
273 Ga0500641_0014143 3300053096 Bacteria 2941
274 Ga0500616_0000923 3300053153 Bacteria 32124
275 Ga0500552_000905 3300053733 Bacteria 2798
276 Ga0099795_10019903
277 Ga0058860_12081760
278 Ga0070680_100039327
279 Ga0070680_100213528
280 Ga0070669_100085314
281 Ga0070709_10043396
282 Ga0070709_10083602
283 Ga0070714_100010342
284 Ga0070713_100009006
285 Ga0070713_100275421
286 Ga0070710_10073794
287 Ga0070711_100013151
288 Ga0070705_100127492
289 Ga0070708_100004914
290 Ga0070681_10050964
291 Ga0070706_100025460
292 Ga0070706_100133892
293 Ga0070706_100160871
294 Ga0070706_100170172
295 Ga0070707_100009165
296 Ga0070707_100068983
297 Ga0070707_100220341
298 Ga0070698_100002264
299 Ga0070698_100039850
300 Ga0070698_100100655
301 Ga0070699_100012929
302 Ga0070699_100031730
303 Ga0070699_100052796
304 Ga0070679_100156211
305 Ga0070697_100027000
306 Ga0068853_100007223
307 Ga0068853_100021111
308 Ga0070672_100047904
309 Ga0070686_100023850
310 Ga0070695_100092645
311 Ga0070665_100018397
312 Ga0070704_100032588
313 Ga0068855_100336587
314 Ga0068857_100055154
315 Ga0068857_100075364
316 Ga0068859_100020386
317 Ga0068866_10080255
318 Ga0068861_100119067
319 Ga0068870_10081882
320 Ga0068860_100052987
321 Ga0068862_100014175
322 Ga0068862_100054824
323 Ga0068862_100215309
324 Ga0081455_10005889
325 Ga0081455_10033227
326 Ga0081538_10001248
327 Ga0081538_10009231
328 Ga0081538_10018595
329 Ga0081540_1044415
330 Ga0081539_10000830
331 Ga0070717_10016772
332 Ga0070717_10100559
333 Ga0075365_10048249
334 Ga0075365_10074363
335 Ga0070716_100063078
336 Ga0070712_100009537
337 Ga0070712_100043926
338 Ga0075362_10020507
339 Ga0075362_10038650
340 Ga0075367_10003972
341 Ga0075369_10003222
342 Ga0075369_10005310
343 Ga0075366_10003474
344 Ga0075366_10096812
345 Ga0075370_10035863
346 Ga0075370_10081035
347 Ga0075428_100005100
348 Ga0075428_100006619
349 Ga0075430_100000104
350 Ga0075430_100050110
351 Ga0075431_100002797
352 Ga0075431_100007526
353 Ga0075431_100029267
354 Ga0075433_10007389
355 Ga0075433_10017154
356 Ga0075434_100010879
357 Ga0075434_100012360
358 Ga0075434_100017537
359 Ga0075434_100022145
360 Ga0075434_100221764
361 Ga0075429_100002837
362 Ga0075429_100005732
363 Ga0075436_100015581
364 Ga0097620_100020389
365 Ga0075435_100014234
366 Ga0075435_100057738
367 Ga0075435_100249249
368 Ga0099795_10001634
369 Ga0105240_10035880
370 Ga0105240_10105075
371 Ga0111539_10002748
372 Ga0111539_10091960
373 Ga0111539_10225300
374 Ga0111539_10288366
375 Ga0105245_10092253
376 Ga0105247_10124478
377 Ga0114129_10046663
378 Ga0114129_10067087
379 Ga0114129_10077468
380 Ga0105241_10021687
381 Ga0105241_10110948
382 Ga0105242_10055429
383 Ga0105248_10032442
384 Ga0105237_10025251
385 Ga0105249_10046782
386 Ga0105239_10268849
387 Ga0157371_10078227
388 Ga0163162_10308620
389 Ga0157375_10200745
390 Ga0163163_10006895
391 Ga0182008_10006826
392 Ga0213875_10002325
393 Ga0213871_10001616
394 Ga0207692_10027377
395 Ga0207642_10072185
396 Ga0207688_10034695
397 Ga0207684_10080091
398 Ga0207684_10091193
399 Ga0207684_10189029
400 Ga0207654_10036304
401 Ga0207695_10202302
402 Ga0207671_10044222
403 Ga0207693_10006362
404 Ga0207693_10017986
405 Ga0207693_10080075
406 Ga0207663_10008716
407 Ga0207663_10146805
408 Ga0207660_10031737
409 Ga0207652_10014990
410 Ga0207646_10013969
411 Ga0207646_10018992
412 Ga0207646_10033274
413 Ga0207646_10046956
414 Ga0207646_10142293
415 Ga0207646_10308809
416 Ga0207681_10235745
417 Ga0207700_10085116
418 Ga0207664_10014173
419 Ga0207669_10088640
420 Ga0207665_10027661
421 Ga0207665_10156321
422 Ga0207691_10089645
423 Ga0207711_10083013
424 Ga0207711_10171498
425 Ga0207689_10026103
426 Ga0207712_10063141
427 Ga0207639_10015336
428 Ga0207639_10016026
429 Ga0207678_10076853
430 Ga0207702_10159497
431 Ga0207641_10152026
432 Ga0207674_10005978
433 Ga0207675_100147930
434 Ga0207675_100204196
435 Ga0207428_10006690
436 Ga0207428_10031261
437 Ga0268266_10124741
438 Ga0268265_10044119
439 Ga0268265_10069283
440 Ga0268265_10196710
441 Ga0268265_10266904
442 Ga0268264_10116210
443 Ga0268264_10212228
444 Ga0265337_1011677
445 Ga0265338_10007183
446 Ga0265338_10150248
447 Ga0307406_10081043
448 Ga0307416_100005558
449 Ga0307411_10022647
450 Ga0373954_0001893
451 Ga0373942_0025889
452 Ga0373924_0037477
453 Ga0373931_0002465
454 Ga0373931_0149762
455 Ga0373935_0093724
456 Ga0373933_0002645
457 Ga0373947_0046621
458 Ga0373937_0006967
459 Ga0373937_0095548
460 Ga0373937_0256228
461 Ga0373925_0204602
462 Ga0395899_0083403
463 Ga0395900_0003055
464 Ga0395898_0007732
465 Ga0436364_0082987
466 Ga0395901_0001797
467 Ga0436365_1050828
468 Ga0436360_0051491
469 Ga0436360_0237038
470 Ga0436360_0482011
471 Ga0436360_1310161
472 Ga0436361_0636899
473 Ga0436362_0217576
474 Ga0436362_0802619
475 Ga0451577_0015182
476 Ga0451577_0066655
477 Ga0453683_0006408
478 Ga0466963_0035578
479 Ga0453684_0011989
480 Ga0451576_0029099
481 Ga0466967_0081803
482 Ga0495651_0136909
483 Ga0495580_0002649
484 Ga0495580_0042179
485 Ga0495664_0008279
486 Ga0495587_0027835
487 Ga0495645_0048267
488 Ga0495667_0002286
489 Ga0495667_0003744
490 Ga0495659_0028516
491 Ga0495599_0006109
492 Ga0495646_0035876
493 Ga0495674_0006242
494 Ga0495680_0161961
495 Ga0495675_0006698
496 Ga0495684_0049293
497 Ga0495602_0001266
498 Ga0496102_0033785
499 Ga0496103_0152127
500 Ga0496112_0050000
501 Ga0496126_0047058
502 Ga0501037_0014003
503 Ga0501040_0068701
504 Ga0501043_0036456
505 Ga0501067_0112345
506 Ga0501070_0082979
507 Ga0501072_0046445
508 Ga0501076_0036807
509 Ga0501044_0025883
510 nmdc:mga03683_678_c1
511 nmdc:mga0yw44_123935_c1
512 nmdc:mga0yw44_51004_c1
513 nmdc:mga06z11_11118_c1
514 nmdc:mga07m45_13388_c1
515 nmdc:mga05p37_1276_c1
516 nmdc:mga05p37_281429_c1
517 nmdc:mga05p37_32968_c1
518 nmdc:mga05p37_41058_c1
519 nmdc:mga09592_2187_c1
520 nmdc:mga09592_2326_c1
521 nmdc:mga09592_262992_c1
522 nmdc:mga0qj67_788_c1
523 nmdc:mga06r32_102883_c1
524 nmdc:mga06r32_1553_c1
525 nmdc:mga06r32_18977_c1
526 nmdc:mga06r32_205_c1
527 nmdc:mga08y16_24233_c1
528 nmdc:mga08y16_257474_c1
529 nmdc:mga08y16_6236_c1
530 nmdc:mga0n895_14350_c1
531 nmdc:mga0n895_20113_c1
532 nmdc:mga0n895_42508_c1
533 nmdc:mga0n895_58513_c1
534 nmdc:mga0rr50_59237_c1
535 nmdc:mga0rr50_98322_c1
536 nmdc:mga0a205_116185_c1
537 nmdc:mga0a205_1366_c1
538 nmdc:mga0a205_1637_c2
539 nmdc:mga0a205_35198_c1
540 nmdc:mga0a205_49164_c1
541 nmdc:mga0a205_66141_c1
542 nmdc:mga0sz30_16313_c1
543 nmdc:mga0sz30_6147_c1
544 Ga0495601_0011024
545 Ga0495612_0001376
546 Ga0495595_0034971
547 Ga0495619_0075792
548 Ga0500641_0014143
549 Ga0500616_0000923
550 Ga0500552_000905

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00994

MoCF_biosynth

Probable molybdopterin binding domain

41

207

0.95

PF18146

CinA_KH

Damage-inducible protein CinA KH domain

217

292

0.91

PF02464

CinA

Competence-damaged protein

295

449

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
6mr3-assembly1.cif.gz_B-3 crystal structure of the competence-damaged protein (cina) superfamily protein from streptococcus mutans 0.8499 177 409
6mr3-assembly2.cif.gz_C-2 crystal structure of the competence-damaged protein (cina) superfamily protein from streptococcus mutans 0.8457 177 409
3kbq-assembly1.cif.gz_A the crystal structure of the protein cina with unknown function from thermoplasma acidophilum 0.8454 1 172
3kbq-assembly1.cif.gz_A the crystal structure of the protein cina with unknown function from thermoplasma acidophilum 0.8268 1 172
6mr3-assembly2.cif.gz_C-2 crystal structure of the competence-damaged protein (cina) superfamily protein from streptococcus mutans 0.8257 177 409
ID Description Score Start End Superfamily
af_P77808_2_172_3.40.980.10 Alpha Beta;3-Layer(aba) Sandwich;Molybdenum Cofactor Biosythetic Enzyme; Chain A;MoaB/Mog-like domain 0.9237 1 171 3.40.980.10
af_P77808_2_172_3.40.980.10 Alpha Beta;3-Layer(aba) Sandwich;Molybdenum Cofactor Biosythetic Enzyme; Chain A;MoaB/Mog-like domain 0.9186 1 171 3.40.980.10
af_Q2FZ10_1_167_3.40.980.10 Alpha Beta;3-Layer(aba) Sandwich;Molybdenum Cofactor Biosythetic Enzyme; Chain A;MoaB/Mog-like domain 0.8897 1 165 3.40.980.10
af_Q2FZ10_1_167_3.40.980.10 Alpha Beta;3-Layer(aba) Sandwich;Molybdenum Cofactor Biosythetic Enzyme; Chain A;MoaB/Mog-like domain 0.8749 1 165 3.40.980.10
af_P0A6G3_1_161_3.90.950.20 Alpha Beta;Alpha-Beta Complex;Maf protein;CinA-like 0.8558 261 408 3.90.950.20
ID Description Score Start End GO Terms
AF-A0A2V7GHW4-F1-model_v4 CinA C-terminal domain-containing protein 0.975 279 423
AF-A0A2V7GHW4-F1-model_v4 CinA C-terminal domain-containing protein 0.9619 279 423
AF-A0A1J5NZ42-F1-model_v4 Competence-damaged protein 0.9526 323 423
AF-A0A659SCK5-F1-model_v4 Competence/damage-inducible protein A 0.9231 1 171
AF-A0A257MVY9-F1-model_v4 Competence/damage-inducible protein CinA 0.9086 2 171

Map