F379764

General Info

Members Datasets Scaffolds Average Seq Length
274 185 548 185

Family's Representative Sequence

Representative Sequence 3300025906|Ga0207699_10319410|Ga0207699_103194101
Length 205
Sequence MPTATRVLAAFALLTSLAALSRPAHAEPVTWKIDPAHTEAGFEVRHFFSKVHGVFHDVDGTIVFDEANPTALAIDASAKVASVDTGNKNRDADLQTADFFDAEKYPTMDFKSTRVEKKGAEEYSVTGDLTIHGVTKSVTFAVEGPTAPGKDPWGNTRIGISATTKINRKDFGLNWNVALEAGGVLVGDRIKIDLEVQAARDPNAA

Samples

Sample ID Description Type Environment
1 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003162 Avena fatua rhizosphere microbial communities - H4_Rhizo_Litter_21 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
3 3300003163 Avena fatua rhizosphere microbial communities - H1_Rhizo_Litter_2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
4 3300003308 Avena fatua rhizosphere microbial communities - H4_Rhizo_Litter_20 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
5 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
6 3300003544 Grassland soil microbial communities from Hopland, California, USA - Sample H2_Rhizo_33 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
7 3300003579 Grassland soil microbial communities from Hopland, California, USA - Sample H4_Rhizo_45 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
8 3300003693 Avena fatua rhizosphere microbial communities - H2_Rhizo_Litter_49 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
9 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
10 3300004800 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
11 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
12 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
13 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
14 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
15 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
16 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
17 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
18 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
19 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
20 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
21 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
22 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
23 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
24 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
25 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
26 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
27 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
28 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
29 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
30 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
31 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
32 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
33 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
34 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
35 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
36 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
37 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
38 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
39 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
40 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
41 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
42 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
43 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
44 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
45 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
46 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
47 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
48 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
49 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
50 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
51 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
52 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
53 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
54 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
55 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
56 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
57 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
58 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
59 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
60 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
61 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
62 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
63 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
64 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
65 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
66 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
67 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
68 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
69 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
70 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
71 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
72 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
73 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
74 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
75 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
76 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
77 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
78 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
79 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
80 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
81 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
82 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
83 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
84 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
85 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
86 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
87 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
88 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
89 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
90 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
91 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
92 3300020076 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) (version 3) Metatranscriptome Rhizosphere
93 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
94 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
95 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
96 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
97 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
98 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
99 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
100 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
101 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
102 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
103 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
104 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
135 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
136 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
137 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
138 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
139 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
140 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
141 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
142 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
143 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
144 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
145 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
146 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
147 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
148 3300038699 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot26 Metagenome Rhizosphere
149 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
150 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
151 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
152 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
153 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
154 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
155 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
156 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
157 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
158 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
159 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
160 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
161 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
162 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
163 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
164 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
165 3300049127 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_A_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
166 3300049130 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_B_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
167 3300049162 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_A_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
168 3300049529 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
169 3300049532 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
170 3300049534 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
171 3300049551 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
172 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
173 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
174 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
175 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
176 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
177 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
178 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
179 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
180 3300059507 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 98R_CW_T2_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
181 3300059511 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 56R_CD_T2_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
182 3300059626 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 173R_CD_T3_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
183 3300059640 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 8R_CD_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
184 3300059642 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 10R_AW_T1_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
185 3300060346 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 169R_CW_T3_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 81.75
Metatranscriptomes 18.25
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 3.28
Rhizosphere 94.16
Stem 0
Stem Tuber 0
Unclassified 19.34

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207699_10319410 3300025906 Bacteria 1089
2 Ga0006778J45830_1037785 3300003162 Bacteria 692
3 Ga0006759J45824_1070504 3300003163 Bacteria 681
4 Ga0006777J48905_1108801 3300003308 Bacteria 660
5 rootH2_10053524 3300003320 Bacteria 7738
6 Ga0007417J51691_1062616 3300003544 Bacteria 682
7 Ga0007429J51699_1067245 3300003579 Bacteria 691
8 Ga0032354_1045770 3300003693 Bacteria 702
9 Ga0058863_11745638 3300004799 Unclassified 644
10 Ga0058861_10538363 3300004800 Bacteria 657
11 Ga0058861_10715999 3300004800 Unclassified 636
12 Ga0058861_11792692 3300004800 Bacteria 685
13 Ga0058861_11813341 3300004800 Bacteria 610
14 Ga0058862_11209354 3300004803 Unclassified 633
15 Ga0058862_12535492 3300004803 Unclassified 1554
16 Ga0058862_12593525 3300004803 Bacteria 609
17 Ga0065715_10225828 3300005293 Bacteria 1249
18 Ga0070676_10144525 3300005328 Bacteria 1517
19 Ga0070683_100019284 3300005329 Bacteria 6058
20 Ga0070683_100342317 3300005329 Unclassified 1424
21 Ga0070683_100369489 3300005329 Bacteria 1366
22 Ga0070690_100377000 3300005330 Bacteria 1036
23 Ga0070670_100000023 3300005331 Bacteria 194438
24 Ga0068869_100027557 3300005334 Bacteria 3963
25 Ga0068869_100445465 3300005334 Unclassified 1072
26 Ga0068869_100788143 3300005334 Unclassified 816
27 Ga0070682_100780578 3300005337 Unclassified 774
28 Ga0068868_100049864 3300005338 Bacteria 3286
29 Ga0070675_100007614 3300005354 Bacteria 8377
30 Ga0070671_100109968 3300005355 Bacteria 2315
31 Ga0070673_100104378 3300005364 Bacteria 2340
32 Ga0070673_100560699 3300005364 Bacteria 1038
33 Ga0070688_100228564 3300005365 Unclassified 1315
34 Ga0070667_100011988 3300005367 Bacteria 7174
35 Ga0070667_100095600 3300005367 Bacteria 2562
36 Ga0070713_101795099 3300005436 Bacteria 595
37 Ga0070711_100114435 3300005439 Bacteria 1985
38 Ga0070705_100783173 3300005440 Unclassified 757
39 Ga0070700_100041917 3300005441 Unclassified 2808
40 Ga0070708_100453190 3300005445 Bacteria 1210
41 Ga0070663_101428486 3300005455 Viruses 613
42 Ga0070678_100007997 3300005456 Bacteria 6303
43 Ga0070678_100035360 3300005456 Unclassified 3487
44 Ga0070662_100023440 3300005457 Bacteria 4240
45 Ga0068867_100017383 3300005459 Bacteria 5109
46 Ga0068867_100156615 3300005459 Bacteria 1794
47 Ga0068867_100389362 3300005459 Bacteria 1173
48 Ga0070685_10411343 3300005466 Bacteria 939
49 Ga0070706_100000298 3300005467 Bacteria 60360
50 Ga0070706_100548494 3300005467 Bacteria 1075
51 Ga0070707_100056901 3300005468 Bacteria 3751
52 Ga0070707_100343043 3300005468 Bacteria 1451
53 Ga0070698_100067921 3300005471 Unclassified 3584
54 Ga0070698_100208146 3300005471 Bacteria 1891
55 Ga0070699_100039335 3300005518 Bacteria 4094
56 Ga0070699_100672900 3300005518 Bacteria 945
57 Ga0070684_100161460 3300005535 Bacteria 2033
58 Ga0070684_100658628 3300005535 Bacteria 975
59 Ga0070672_100052550 3300005543 Bacteria 3181
60 Ga0070672_100166917 3300005543 Bacteria 1829
61 Ga0070695_100384276 3300005545 Bacteria 1060
62 Ga0070696_100902834 3300005546 Bacteria 733
63 Ga0070693_100204513 3300005547 Bacteria 1284
64 Ga0070665_100000360 3300005548 Bacteria 67751
65 Ga0068855_101842847 3300005563 Unclassified 614
66 Ga0068854_100594173 3300005578 Bacteria 944
67 Ga0070702_100156379 3300005615 Bacteria 1469
68 Ga0068852_100014543 3300005616 Bacteria 6064
69 Ga0068852_101107438 3300005616 Unclassified 812
70 Ga0068859_100038124 3300005617 Unclassified 4822
71 Ga0068859_100907233 3300005617 Bacteria 966
72 Ga0068864_100043076 3300005618 Unclassified 3864
73 Ga0068864_101079060 3300005618 Bacteria 798
74 Ga0068866_10006735 3300005718 Unclassified 4790
75 Ga0068866_10369090 3300005718 Bacteria 917
76 Ga0068861_100074178 3300005719 Bacteria 2645
77 Ga0068861_100406008 3300005719 Bacteria 1210
78 Ga0068863_100037915 3300005841 Unclassified 4587
79 Ga0068858_100016344 3300005842 Bacteria 6971
80 Ga0097621_100115449 3300006237 Bacteria 2272
81 Ga0097621_100182727 3300006237 Unclassified 1812
82 Ga0068871_100046484 3300006358 Bacteria 3496
83 Ga0068871_100435521 3300006358 Bacteria 1173
84 Ga0068871_100516070 3300006358 Bacteria 1079
85 Ga0075433_10028259 3300006852 Bacteria 4767
86 Ga0075434_100032311 3300006871 Bacteria 5161
87 Ga0075434_100874887 3300006871 Bacteria 914
88 Ga0075434_101521800 3300006871 Bacteria 678
89 Ga0068865_100064278 3300006881 Bacteria 2582
90 Ga0068865_100089485 3300006881 Bacteria 2230
91 Ga0068865_101042948 3300006881 Unclassified 718
92 Ga0097620_100038125 3300006931 Unclassified 4822
93 Ga0097620_100907284 3300006931 Bacteria 966
94 Ga0075435_100186299 3300007076 Bacteria 1755
95 Ga0105240_10229431 3300009093 Bacteria 2159
96 Ga0111539_10839585 3300009094 Bacteria 1069
97 Ga0105245_10104889 3300009098 Unclassified 2621
98 Ga0105245_10252185 3300009098 Bacteria 1715
99 Ga0105245_10805635 3300009098 Bacteria 977
100 Ga0105247_10215247 3300009101 Bacteria 1298
101 Ga0114129_10414919 3300009147 Bacteria 1772
102 Ga0114129_10580598 3300009147 Bacteria 1454
103 Ga0105243_10322555 3300009148 Bacteria 1408
104 Ga0105243_10693130 3300009148 Bacteria 992
105 Ga0105241_10066225 3300009174 Bacteria 2793
106 Ga0105241_10244134 3300009174 Bacteria 1519
107 Ga0105242_10087622 3300009176 Bacteria 2614
108 Ga0105242_11147055 3300009176 Bacteria 794
109 Ga0105248_10194160 3300009177 Bacteria 2287
110 Ga0105248_10299104 3300009177 Bacteria 1812
111 Ga0105248_10825240 3300009177 Unclassified 1046
112 Ga0105238_10491114 3300009551 Bacteria 1228
113 Ga0105249_10016490 3300009553 Bacteria 6554
114 Ga0099796_10091373 3300010159 Unclassified 1132
115 Ga0105246_10465024 3300011119 Bacteria 1066
116 Ga0105246_10914074 3300011119 Unclassified 788
117 Ga0157373_10017625 3300013100 Bacteria 5201
118 Ga0157373_10931463 3300013100 Unclassified 646
119 Ga0157371_10154665 3300013102 Bacteria 1636
120 Ga0157369_10077308 3300013105 Bacteria 3567
121 Ga0157369_10239346 3300013105 Bacteria 1896
122 Ga0157374_10043645 3300013296 Bacteria 4143
123 Ga0157374_10093144 3300013296 Bacteria 2876
124 Ga0157378_10012185 3300013297 Bacteria 7529
125 Ga0163162_10019705 3300013306 Bacteria 6622
126 Ga0157372_10308527 3300013307 Unclassified 1841
127 Ga0157372_10453020 3300013307 Bacteria 1495
128 Ga0157375_10063955 3300013308 Bacteria 3662
129 Ga0163163_10136563 3300014325 Bacteria 2493
130 Ga0163163_10725148 3300014325 Bacteria 1058
131 Ga0163163_10964398 3300014325 Unclassified 916
132 Ga0182008_10265697 3300014497 Bacteria 888
133 Ga0157377_10373876 3300014745 Bacteria 963
134 Ga0157377_10410182 3300014745 Bacteria 925
135 Ga0157379_10344475 3300014968 Bacteria 1363
136 Ga0157376_10195578 3300014969 Bacteria 1857
137 Ga0157376_10239332 3300014969 Bacteria 1690
138 Ga0163161_10014441 3300017792 Bacteria 5497
139 Ga0197907_10411408 3300020069 Unclassified 937
140 Ga0197907_11428505 3300020069 Bacteria 689
141 Ga0197907_11449012 3300020069 Unclassified 768
142 Ga0206356_11835756 3300020070 Unclassified 823
143 Ga0206349_1332525 3300020075 Unclassified 1168
144 Ga0206349_1683049 3300020075 Bacteria 679
145 Ga0206355_1082540 3300020076 Bacteria 714
146 Ga0206355_1328851 3300020076 Bacteria 693
147 Ga0206351_10191396 3300020077 Bacteria 1067
148 Ga0206351_10301194 3300020077 Bacteria 1141
149 Ga0206352_10966596 3300020078 Bacteria 736
150 Ga0206350_10271137 3300020080 Bacteria 684
151 Ga0206350_10414539 3300020080 Unclassified 676
152 Ga0206350_10943242 3300020080 Bacteria 699
153 Ga0206354_10609425 3300020081 Bacteria 730
154 Ga0206354_10817147 3300020081 Bacteria 654
155 Ga0206354_11409554 3300020081 Bacteria 662
156 Ga0206354_11546192 3300020081 Unclassified 626
157 Ga0206353_10804963 3300020082 Bacteria 750
158 Ga0154015_1308463 3300020610 Bacteria 696
159 Ga0213873_10010910 3300021358 Bacteria 1929
160 Ga0213872_10046460 3300021361 Bacteria 1976
161 Ga0213874_10001711 3300021377 Bacteria 4604
162 Ga0213874_10091292 3300021377 Bacteria 1001
163 Ga0213871_10017800 3300021441 Bacteria 1730
164 Ga0224712_10377413 3300022467 Unclassified 673
165 Ga0224712_10392238 3300022467 Bacteria 661
166 Ga0207642_10015016 3300025899 Bacteria 2875
167 Ga0207710_10345793 3300025900 Unclassified 757
168 Ga0207647_10037771 3300025904 Bacteria 3059
169 Ga0207684_10000539 3300025910 Bacteria 46762
170 Ga0207654_10040829 3300025911 Bacteria 2616
171 Ga0207663_10168995 3300025916 Viruses 1551
172 Ga0207646_10009281 3300025922 Bacteria 9733
173 Ga0207650_10000005 3300025925 Bacteria 663190
174 Ga0207687_11198225 3300025927 Bacteria 653
175 Ga0207700_10320129 3300025928 Bacteria 1344
176 Ga0207706_10025054 3300025933 Bacteria 5348
177 Ga0207686_10010707 3300025934 Unclassified 4996
178 Ga0207709_10560386 3300025935 Bacteria 900
179 Ga0207691_10005181 3300025940 Bacteria 12586
180 Ga0207691_10049025 3300025940 Bacteria 3870
181 Ga0207691_10538742 3300025940 Unclassified 990
182 Ga0207711_10468196 3300025941 Bacteria 1174
183 Ga0207689_10061150 3300025942 Bacteria 3097
184 Ga0207689_10731169 3300025942 Unclassified 835
185 Ga0207661_10012253 3300025944 Bacteria 6228
186 Ga0207661_10363454 3300025944 Bacteria 1308
187 Ga0207651_10021005 3300025960 Bacteria 3956
188 Ga0207651_10537059 3300025960 Bacteria 1015
189 Ga0207640_10199970 3300025981 Unclassified 1514
190 Ga0207640_10408811 3300025981 Bacteria 1107
191 Ga0207677_10035258 3300026023 Bacteria 3248
192 Ga0207703_10150014 3300026035 Bacteria 2032
193 Ga0207703_10739675 3300026035 Bacteria 937
194 Ga0207708_10007015 3300026075 Bacteria 8327
195 Ga0207702_10398038 3300026078 Unclassified 1327
196 Ga0207702_11205298 3300026078 Bacteria 751
197 Ga0207641_10527324 3300026088 Bacteria 1149
198 Ga0207648_10022684 3300026089 Bacteria 5635
199 Ga0207648_10382621 3300026089 Unclassified 1272
200 Ga0207648_11219276 3300026089 Bacteria 707
201 Ga0207676_11197278 3300026095 Bacteria 753
202 Ga0207676_11203048 3300026095 Bacteria 751
203 Ga0207674_10240811 3300026116 Bacteria 1756
204 Ga0207674_10382737 3300026116 Bacteria 1360
205 Ga0207675_100034191 3300026118 Bacteria 4738
206 Ga0207675_100102155 3300026118 Bacteria 2702
207 Ga0207683_10018787 3300026121 Bacteria 5898
208 Ga0207683_10141241 3300026121 Bacteria 2170
209 Ga0268266_10000162 3300028379 Bacteria 123689
210 Ga0268266_10361017 3300028379 Bacteria 1367
211 Ga0268266_10382144 3300028379 Bacteria 1328
212 Ga0268265_10265399 3300028380 Bacteria 1529
213 Ga0265338_10003528 3300028800 Bacteria 21909
214 Ga0265338_10258585 3300028800 Bacteria 1281
215 Ga0265325_10044161 3300031241 Bacteria 2322
216 Ga0265329_10199272 3300031242 Bacteria 658
217 Ga0265340_10261464 3300031247 Bacteria 770
218 Ga0265331_10202710 3300031250 Bacteria 893
219 Ga0307408_100264566 3300031548 Unclassified 1425
220 Ga0265313_10088249 3300031595 Bacteria 1396
221 Ga0265342_10032134 3300031712 Bacteria 3238
222 Ga0307407_10553942 3300031903 Unclassified 850
223 Ga0373953_0005790 3300035117 Unclassified 4037
224 Ga0373956_0048884 3300035119 Bacteria 1896
225 Ga0373933_0341812 3300035724 Bacteria 972
226 Ga0373933_0858449 3300035724 Bacteria 598
227 Ga0436364_0307027 3300037853 Bacteria 1675
228 Ga0436364_0454195 3300037853 Bacteria 2549
229 Ga0242422_00296 3300038699 Bacteria 2979
230 Ga0242420_000181 3300038996 Bacteria 6546
231 Ga0436365_0280761 3300039437 Bacteria 1365
232 Ga0436360_0304541 3300039438 Bacteria 10968
233 Ga0436361_0632468 3300039447 Bacteria 4114
234 Ga0436363_1120020 3300039450 Bacteria 1241
235 Ga0436362_0463315 3300039453 Bacteria 8792
236 Ga0466961_0070860 3300044693 Bacteria 2213
237 Ga0466958_0283059 3300045836 Bacteria 1063
238 Ga0466958_0418924 3300045836 Bacteria 866
239 Ga0495665_0179131 3300046531 Bacteria 1102
240 Ga0495669_0236863 3300046684 Bacteria 876
241 Ga0496105_0166570 3300048908 Bacteria 1808
242 Ga0496106_0813638 3300048909 Viruses 741
243 Ga0496108_0069355 3300048911 Unclassified 2975
244 Ga0496108_0208704 3300048911 Bacteria 1695
245 Ga0496110_0049964 3300048913 Bacteria 3671
246 Ga0496112_0019374 3300048915 Bacteria 6422
247 Ga0496112_0671292 3300048915 Unclassified 965
248 Ga0496112_0823449 3300048915 Unclassified 852
249 Ga0496113_0258732 3300048916 Viruses 1390
250 Ga0501306_077696 3300049127 Bacteria 569
251 Ga0501310_026079 3300049130 Bacteria 756
252 Ga0501307_075465 3300049162 Bacteria 543
253 Ga0501313_028454 3300049529 Unclassified 717
254 Ga0501316_049203 3300049532 Bacteria 604
255 Ga0501318_039631 3300049534 Bacteria 669
256 Ga0501335_017896 3300049551 Unclassified 739
257 Ga0501034_0072878 3300049571 Bacteria 3443
258 Ga0501070_0161859 3300049586 Bacteria 1845
259 nmdc:mga09592_591177_c1 3300050508 Bacteria 951
260 nmdc:mga0n895_1363650_c1 3300050512 Bacteria 678
261 nmdc:mga0n895_266689_c1 3300050512 Bacteria 1737
262 nmdc:mga0n895_96078_c1 3300050512 Bacteria 2968
263 nmdc:mga0rr50_1367744_c1 3300050513 Unclassified 600
264 nmdc:mga0rr50_340680_c1 3300050513 Bacteria 1260
265 nmdc:mga0a205_29631_c1 3300050515 Bacteria 5238
266 Ga0495601_0058706 3300053077 Bacteria 2439
267 Ga0495619_0127024 3300053085 Bacteria 1751
268 Ga0587086_016780 3300059507 Bacteria 960
269 Ga0587091_104997 3300059511 Unclassified 668
270 Ga0587115_013790 3300059626 Bacteria 1050
271 Ga0587067_105572 3300059640 Bacteria 658
272 Ga0587069_036929 3300059642 Bacteria 817
273 Ga0587069_076391 3300059642 Bacteria 646
274 Ga0587111_0042211 3300060346 Bacteria 976
275 Ga0207699_10319410
276 Ga0006778J45830_1037785
277 Ga0006759J45824_1070504
278 Ga0006777J48905_1108801
279 rootH2_10053524
280 Ga0007417J51691_1062616
281 Ga0007429J51699_1067245
282 Ga0032354_1045770
283 Ga0058863_11745638
284 Ga0058861_10538363
285 Ga0058861_10715999
286 Ga0058861_11792692
287 Ga0058861_11813341
288 Ga0058862_11209354
289 Ga0058862_12535492
290 Ga0058862_12593525
291 Ga0065715_10225828
292 Ga0070676_10144525
293 Ga0070683_100019284
294 Ga0070683_100342317
295 Ga0070683_100369489
296 Ga0070690_100377000
297 Ga0070670_100000023
298 Ga0068869_100027557
299 Ga0068869_100445465
300 Ga0068869_100788143
301 Ga0070682_100780578
302 Ga0068868_100049864
303 Ga0070675_100007614
304 Ga0070671_100109968
305 Ga0070673_100104378
306 Ga0070673_100560699
307 Ga0070688_100228564
308 Ga0070667_100011988
309 Ga0070667_100095600
310 Ga0070713_101795099
311 Ga0070711_100114435
312 Ga0070705_100783173
313 Ga0070700_100041917
314 Ga0070708_100453190
315 Ga0070663_101428486
316 Ga0070678_100007997
317 Ga0070678_100035360
318 Ga0070662_100023440
319 Ga0068867_100017383
320 Ga0068867_100156615
321 Ga0068867_100389362
322 Ga0070685_10411343
323 Ga0070706_100000298
324 Ga0070706_100548494
325 Ga0070707_100056901
326 Ga0070707_100343043
327 Ga0070698_100067921
328 Ga0070698_100208146
329 Ga0070699_100039335
330 Ga0070699_100672900
331 Ga0070684_100161460
332 Ga0070684_100658628
333 Ga0070672_100052550
334 Ga0070672_100166917
335 Ga0070695_100384276
336 Ga0070696_100902834
337 Ga0070693_100204513
338 Ga0070665_100000360
339 Ga0068855_101842847
340 Ga0068854_100594173
341 Ga0070702_100156379
342 Ga0068852_100014543
343 Ga0068852_101107438
344 Ga0068859_100038124
345 Ga0068859_100907233
346 Ga0068864_100043076
347 Ga0068864_101079060
348 Ga0068866_10006735
349 Ga0068866_10369090
350 Ga0068861_100074178
351 Ga0068861_100406008
352 Ga0068863_100037915
353 Ga0068858_100016344
354 Ga0097621_100115449
355 Ga0097621_100182727
356 Ga0068871_100046484
357 Ga0068871_100435521
358 Ga0068871_100516070
359 Ga0075433_10028259
360 Ga0075434_100032311
361 Ga0075434_100874887
362 Ga0075434_101521800
363 Ga0068865_100064278
364 Ga0068865_100089485
365 Ga0068865_101042948
366 Ga0097620_100038125
367 Ga0097620_100907284
368 Ga0075435_100186299
369 Ga0105240_10229431
370 Ga0111539_10839585
371 Ga0105245_10104889
372 Ga0105245_10252185
373 Ga0105245_10805635
374 Ga0105247_10215247
375 Ga0114129_10414919
376 Ga0114129_10580598
377 Ga0105243_10322555
378 Ga0105243_10693130
379 Ga0105241_10066225
380 Ga0105241_10244134
381 Ga0105242_10087622
382 Ga0105242_11147055
383 Ga0105248_10194160
384 Ga0105248_10299104
385 Ga0105248_10825240
386 Ga0105238_10491114
387 Ga0105249_10016490
388 Ga0099796_10091373
389 Ga0105246_10465024
390 Ga0105246_10914074
391 Ga0157373_10017625
392 Ga0157373_10931463
393 Ga0157371_10154665
394 Ga0157369_10077308
395 Ga0157369_10239346
396 Ga0157374_10043645
397 Ga0157374_10093144
398 Ga0157378_10012185
399 Ga0163162_10019705
400 Ga0157372_10308527
401 Ga0157372_10453020
402 Ga0157375_10063955
403 Ga0163163_10136563
404 Ga0163163_10725148
405 Ga0163163_10964398
406 Ga0182008_10265697
407 Ga0157377_10373876
408 Ga0157377_10410182
409 Ga0157379_10344475
410 Ga0157376_10195578
411 Ga0157376_10239332
412 Ga0163161_10014441
413 Ga0197907_10411408
414 Ga0197907_11428505
415 Ga0197907_11449012
416 Ga0206356_11835756
417 Ga0206349_1332525
418 Ga0206349_1683049
419 Ga0206355_1082540
420 Ga0206355_1328851
421 Ga0206351_10191396
422 Ga0206351_10301194
423 Ga0206352_10966596
424 Ga0206350_10271137
425 Ga0206350_10414539
426 Ga0206350_10943242
427 Ga0206354_10609425
428 Ga0206354_10817147
429 Ga0206354_11409554
430 Ga0206354_11546192
431 Ga0206353_10804963
432 Ga0154015_1308463
433 Ga0213873_10010910
434 Ga0213872_10046460
435 Ga0213874_10001711
436 Ga0213874_10091292
437 Ga0213871_10017800
438 Ga0224712_10377413
439 Ga0224712_10392238
440 Ga0207642_10015016
441 Ga0207710_10345793
442 Ga0207647_10037771
443 Ga0207684_10000539
444 Ga0207654_10040829
445 Ga0207663_10168995
446 Ga0207646_10009281
447 Ga0207650_10000005
448 Ga0207687_11198225
449 Ga0207700_10320129
450 Ga0207706_10025054
451 Ga0207686_10010707
452 Ga0207709_10560386
453 Ga0207691_10005181
454 Ga0207691_10049025
455 Ga0207691_10538742
456 Ga0207711_10468196
457 Ga0207689_10061150
458 Ga0207689_10731169
459 Ga0207661_10012253
460 Ga0207661_10363454
461 Ga0207651_10021005
462 Ga0207651_10537059
463 Ga0207640_10199970
464 Ga0207640_10408811
465 Ga0207677_10035258
466 Ga0207703_10150014
467 Ga0207703_10739675
468 Ga0207708_10007015
469 Ga0207702_10398038
470 Ga0207702_11205298
471 Ga0207641_10527324
472 Ga0207648_10022684
473 Ga0207648_10382621
474 Ga0207648_11219276
475 Ga0207676_11197278
476 Ga0207676_11203048
477 Ga0207674_10240811
478 Ga0207674_10382737
479 Ga0207675_100034191
480 Ga0207675_100102155
481 Ga0207683_10018787
482 Ga0207683_10141241
483 Ga0268266_10000162
484 Ga0268266_10361017
485 Ga0268266_10382144
486 Ga0268265_10265399
487 Ga0265338_10003528
488 Ga0265338_10258585
489 Ga0265325_10044161
490 Ga0265329_10199272
491 Ga0265340_10261464
492 Ga0265331_10202710
493 Ga0307408_100264566
494 Ga0265313_10088249
495 Ga0265342_10032134
496 Ga0307407_10553942
497 Ga0373953_0005790
498 Ga0373956_0048884
499 Ga0373933_0341812
500 Ga0373933_0858449
501 Ga0436364_0307027
502 Ga0436364_0454195
503 Ga0242422_00296
504 Ga0242420_000181
505 Ga0436365_0280761
506 Ga0436360_0304541
507 Ga0436361_0632468
508 Ga0436363_1120020
509 Ga0436362_0463315
510 Ga0466961_0070860
511 Ga0466958_0283059
512 Ga0466958_0418924
513 Ga0495665_0179131
514 Ga0495669_0236863
515 Ga0496105_0166570
516 Ga0496106_0813638
517 Ga0496108_0069355
518 Ga0496108_0208704
519 Ga0496110_0049964
520 Ga0496112_0019374
521 Ga0496112_0671292
522 Ga0496112_0823449
523 Ga0496113_0258732
524 Ga0501306_077696
525 Ga0501310_026079
526 Ga0501307_075465
527 Ga0501313_028454
528 Ga0501316_049203
529 Ga0501318_039631
530 Ga0501335_017896
531 Ga0501034_0072878
532 Ga0501070_0161859
533 nmdc:mga09592_591177_c1
534 nmdc:mga0n895_1363650_c1
535 nmdc:mga0n895_266689_c1
536 nmdc:mga0n895_96078_c1
537 nmdc:mga0rr50_1367744_c1
538 nmdc:mga0rr50_340680_c1
539 nmdc:mga0a205_29631_c1
540 Ga0495601_0058706
541 Ga0495619_0127024
542 Ga0587086_016780
543 Ga0587091_104997
544 Ga0587115_013790
545 Ga0587067_105572
546 Ga0587069_036929
547 Ga0587069_076391
548 Ga0587111_0042211

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04264

YceI

YceI-like domain

31

198

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
7bwl-assembly1.cif.gz_A structure of antibiotic sequester from pseudomonas aerurinosa 0.934 1 172
1y0g-assembly2.cif.gz_D crystal structure of the escherichia coli ycei protein, structural genomics 0.9282 1 174
5ixh-assembly1.cif.gz_A crystal structure of burkholderia cenocepacia bcna 0.9253 5 169
7bwl-assembly1.cif.gz_A structure of antibiotic sequester from pseudomonas aerurinosa 0.9233 1 172
1y0g-assembly2.cif.gz_D crystal structure of the escherichia coli ycei protein, structural genomics 0.9229 1 174
ID Description Score Start End Superfamily
af_P0A8X2_23_191_2.40.128.110 Mainly Beta;Beta Barrel;Lipocalin;Lipid/polyisoprenoid-binding, YceI-like 0.9336 1 174 2.40.128.110
af_P0A8X2_23_191_2.40.128.110 Mainly Beta;Beta Barrel;Lipocalin;Lipid/polyisoprenoid-binding, YceI-like 0.9282 1 174 2.40.128.110
1wubA00 Mainly Beta;Beta Barrel;Lipocalin;Lipid/polyisoprenoid-binding, YceI-like 0.9155 1 172 2.40.128.110
af_Q2FUS9_3_167_2.40.128.110 Mainly Beta;Beta Barrel;Lipocalin;Lipid/polyisoprenoid-binding, YceI-like 0.9045 5 169 2.40.128.110
3hpeB00 Mainly Beta;Beta Barrel;Lipocalin;Lipid/polyisoprenoid-binding, YceI-like 0.8924 1 172 2.40.128.110
ID Description Score Start End GO Terms
AF-A0A3M2DXZ1-F1-model_v4 Lipid/polyisoprenoid-binding YceI-like domain-containing protein 0.984 2 171
AF-A0A7C2Q9A1-F1-model_v4 Polyisoprenoid-binding protein 0.9762 1 172
AF-A0A7I8N1T2-F1-model_v4 Protein yceI 0.973 2 171
AF-A0A496B350-F1-model_v4 Polyisoprenoid-binding protein 0.9727 2 171
AF-V4P5N4-F1-model_v4 Lipid/polyisoprenoid-binding YceI-like domain-containing protein 0.9725 2 174

Map