F379662

General Info

Members Datasets Scaffolds Average Seq Length
274 193 548 182

Family's Representative Sequence

Representative Sequence 3300006914|Ga0075436_100522055|Ga0075436_1005220552
Length 205
Sequence VGLPVRVADPEARVLAVNFREESLPGVFTVEAEPSVDERGFFARTYSSSEFAEHGISFTIAQASVSFNSRRGTLRGMHLQVPPHEEAKLVRCIAGSAYDVVVDLRPGSPTQLQWFGVELSAGRRKGLYIPTGLAHGFFTLEDQTELEYLISTSYEPSAAVGVRWDDPAIGIDWPGRPTVISSRDAAFPDVDAALIRYRGPTALGS

Samples

Sample ID Description Type Environment
1 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
18 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
19 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
20 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
21 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
22 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
23 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
24 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
25 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
26 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
27 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
28 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
29 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
30 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
31 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
32 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
33 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
34 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
35 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
36 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
37 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
38 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
39 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
40 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
41 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
42 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
43 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
44 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
45 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
46 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
47 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
48 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
49 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
50 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
51 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
52 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
53 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
54 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
55 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
56 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
57 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
58 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
59 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
60 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
61 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
62 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
63 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
64 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
65 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
66 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
67 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
68 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
69 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
70 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
71 3300009988 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_233 metaG Metagenome Rhizosphere
72 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
73 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
74 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
75 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
76 3300013875 Rhizosphere microbial communities from switchgrass unharvested rhizosphere in Austin, TX, USA - RS_233 Metagenome Rhizosphere
77 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
78 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
79 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
80 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
81 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
114 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
117 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
118 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
119 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
120 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
121 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
122 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
123 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
124 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
125 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
126 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
127 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
128 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
129 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
130 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
131 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
132 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
133 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
134 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
135 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
136 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
137 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
138 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
139 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
140 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
141 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
142 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
143 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
144 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
145 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
146 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
147 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
148 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
149 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
150 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
151 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
152 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
153 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
154 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
155 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
156 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
157 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
158 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
159 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
160 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
161 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
162 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
163 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
164 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
165 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
167 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
170 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
171 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
172 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
173 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
174 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
175 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
176 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
177 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
178 3300049760 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F12_A_4_control Metagenome Rhizosphere
179 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
180 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
181 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
182 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
183 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
184 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
185 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
186 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
187 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
188 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
189 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
190 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
191 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
192 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
193 8054563764 Acuticoccus kalidii M5D2P5 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.64
Metatranscriptomes 0
Isolates 0.36

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.92
Nodule 0
Rhizoplane 15.33
Rhizosphere 79.56
Stem 0
Stem Tuber 0
Unclassified 11.68

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075436_100522055 3300006914 Unclassified 870
2 rootH2_10158474 3300003320 Unclassified 1721
3 Ga0065712_10338824 3300005290 Bacteria 803
4 Ga0065707_10140188 3300005295 Bacteria 1783
5 Ga0065707_10175172 3300005295 Unclassified 1456
6 Ga0070658_10829904 3300005327 Bacteria 803
7 Ga0070670_100512028 3300005331 Bacteria 1068
8 Ga0070666_10057319 3300005335 Bacteria 2632
9 Ga0070682_100031067 3300005337 Unclassified 3229
10 Ga0068868_100077993 3300005338 Bacteria 2651
11 Ga0068868_100357543 3300005338 Bacteria 1252
12 Ga0070689_100012739 3300005340 Bacteria 6069
13 Ga0070689_100141898 3300005340 Viruses 1932
14 Ga0070687_100112089 3300005343 Bacteria 1546
15 Ga0070661_100549583 3300005344 Bacteria 929
16 Ga0070668_100200075 3300005347 Bacteria 1640
17 Ga0070668_100828934 3300005347 Bacteria 823
18 Ga0070669_100051993 3300005353 Bacteria 2996
19 Ga0070674_100030418 3300005356 Bacteria 3567
20 Ga0070674_100070628 3300005356 Unclassified 2468
21 Ga0070673_100072677 3300005364 Bacteria 2767
22 Ga0070688_100002321 3300005365 Bacteria 9605
23 Ga0070659_100748856 3300005366 Bacteria 847
24 Ga0070667_100134565 3300005367 Bacteria 2160
25 Ga0070703_10000116 3300005406 Bacteria 41452
26 Ga0070703_10008369 3300005406 Bacteria 2908
27 Ga0070709_10009764 3300005434 Bacteria 5301
28 Ga0070714_100070950 3300005435 Unclassified 3012
29 Ga0070701_10005865 3300005438 Bacteria 5122
30 Ga0070705_100000052 3300005440 Bacteria 59874
31 Ga0070705_100006338 3300005440 Bacteria 5795
32 Ga0070694_100000804 3300005444 Bacteria 17612
33 Ga0070694_100087445 3300005444 Bacteria 2180
34 Ga0070694_100146813 3300005444 Bacteria 1719
35 Ga0070694_100288082 3300005444 Unclassified 1254
36 Ga0070694_100321273 3300005444 Unclassified 1191
37 Ga0070708_100068603 3300005445 Bacteria 3188
38 Ga0070678_100019288 3300005456 Bacteria 4442
39 Ga0070678_100189221 3300005456 Bacteria 1691
40 Ga0070678_100431362 3300005456 Bacteria 1151
41 Ga0070678_100595546 3300005456 Unclassified 986
42 Ga0068867_100006968 3300005459 Bacteria 7990
43 Ga0068867_100348303 3300005459 Bacteria 1235
44 Ga0070706_100000408 3300005467 Bacteria 51722
45 Ga0070706_100529087 3300005467 Bacteria 1097
46 Ga0070707_100033172 3300005468 Bacteria 4922
47 Ga0070698_100860666 3300005471 Bacteria 851
48 Ga0070684_100373403 3300005535 Bacteria 1313
49 Ga0070697_100090334 3300005536 Unclassified 2531
50 Ga0070672_100097289 3300005543 Bacteria 2383
51 Ga0070695_100003462 3300005545 Bacteria 9220
52 Ga0070695_100015994 3300005545 Unclassified 4536
53 Ga0070695_100114715 3300005545 Bacteria 1834
54 Ga0070695_100132396 3300005545 Unclassified 1720
55 Ga0070696_100052201 3300005546 Bacteria 2844
56 Ga0070693_100016029 3300005547 Bacteria 3871
57 Ga0070693_100028258 3300005547 Unclassified 3048
58 Ga0070693_100117025 3300005547 Bacteria 1648
59 Ga0070665_100000098 3300005548 Bacteria 164407
60 Ga0070665_100522131 3300005548 Bacteria 1199
61 Ga0070704_100003760 3300005549 Bacteria 8736
62 Ga0070704_100028206 3300005549 Bacteria 3732
63 Ga0070664_100911921 3300005564 Bacteria 824
64 Ga0068857_101111616 3300005577 Bacteria 763
65 Ga0068854_100055093 3300005578 Bacteria 2861
66 Ga0068856_100474216 3300005614 Bacteria 1272
67 Ga0070702_100100387 3300005615 Bacteria 1774
68 Ga0068852_100094348 3300005616 Bacteria 2684
69 Ga0068859_100126272 3300005617 Bacteria 2627
70 Ga0068859_100774309 3300005617 Bacteria 1048
71 Ga0068864_100272994 3300005618 Bacteria 1576
72 Ga0068866_10081753 3300005718 Bacteria 1736
73 Ga0068858_100019582 3300005842 Bacteria 6327
74 Ga0068860_100070219 3300005843 Bacteria 3329
75 Ga0068860_100888946 3300005843 Bacteria 907
76 Ga0068862_100152834 3300005844 Unclassified 2055
77 Ga0081455_10044156 3300005937 Bacteria 3891
78 Ga0075364_10019975 3300006051 Bacteria 4211
79 Ga0070715_10006072 3300006163 Bacteria 4080
80 Ga0070716_100313969 3300006173 Unclassified 1095
81 Ga0070712_100061349 3300006175 Bacteria 2656
82 Ga0075362_10117900 3300006177 Bacteria 1254
83 Ga0097621_100024810 3300006237 Bacteria 4687
84 Ga0068871_100044296 3300006358 Bacteria 3578
85 Ga0068871_100047527 3300006358 Bacteria 3461
86 Ga0068871_100269504 3300006358 Bacteria 1487
87 Ga0075428_100000011 3300006844 Bacteria 194129
88 Ga0075428_100126939 3300006844 Bacteria 2776
89 Ga0075428_100575607 3300006844 Bacteria 1203
90 Ga0075433_10017342 3300006852 Bacteria 5963
91 Ga0075434_100461333 3300006871 Bacteria 1292
92 Ga0075434_100700487 3300006871 Bacteria 1030
93 Ga0075434_100760899 3300006871 Bacteria 985
94 Ga0068865_100038887 3300006881 Bacteria 3223
95 Ga0068865_100761505 3300006881 Bacteria 832
96 Ga0097620_100126274 3300006931 Bacteria 2627
97 Ga0097620_100774308 3300006931 Bacteria 1048
98 Ga0075435_100082372 3300007076 Bacteria 2645
99 Ga0111539_10000011 3300009094 Bacteria 356900
100 Ga0105245_10494281 3300009098 Bacteria 1239
101 Ga0114129_10038670 3300009147 Bacteria 6728
102 Ga0114129_10561734 3300009147 Bacteria 1483
103 Ga0105243_10006709 3300009148 Bacteria 8885
104 Ga0105242_10230568 3300009176 Bacteria 1659
105 Ga0105242_10424126 3300009176 Bacteria 1247
106 Ga0105242_10694270 3300009176 Bacteria 995
107 Ga0105242_11016937 3300009176 Unclassified 838
108 Ga0105035_101122 3300009988 Bacteria 1787
109 Ga0157378_10823534 3300013297 Unclassified 955
110 Ga0163162_10710127 3300013306 Bacteria 1127
111 Ga0157372_10458962 3300013307 Bacteria 1485
112 Ga0157375_10648200 3300013308 Bacteria 1212
113 Ga0157515_122667 3300013875 Bacteria 958
114 Ga0163163_10082911 3300014325 Bacteria 3211
115 Ga0163163_10321924 3300014325 Bacteria 1600
116 Ga0157380_10087958 3300014326 Bacteria 2555
117 Ga0157380_11126832 3300014326 Unclassified 825
118 Ga0157376_10277529 3300014969 Bacteria 1577
119 Ga0163161_10655341 3300017792 Bacteria 870
120 Ga0207697_10000304 3300025315 Bacteria 27532
121 Ga0207653_10000058 3300025885 Bacteria 85352
122 Ga0207653_10012590 3300025885 Bacteria 2642
123 Ga0207692_10008514 3300025898 Bacteria 4247
124 Ga0207688_10011146 3300025901 Bacteria 4893
125 Ga0207684_10000189 3300025910 Bacteria 97835
126 Ga0207660_10461376 3300025917 Unclassified 1028
127 Ga0207662_10002497 3300025918 Bacteria 9245
128 Ga0207649_10570961 3300025920 Bacteria 867
129 Ga0207659_10105678 3300025926 Bacteria 2131
130 Ga0207659_10346637 3300025926 Bacteria 1231
131 Ga0207687_10421645 3300025927 Bacteria 1101
132 Ga0207700_10393226 3300025928 Bacteria 1214
133 Ga0207706_10039099 3300025933 Bacteria 4206
134 Ga0207709_10133953 3300025935 Bacteria 1693
135 Ga0207669_10003963 3300025937 Bacteria 6464
136 Ga0207669_10030348 3300025937 Unclassified 3003
137 Ga0207704_10074109 3300025938 Bacteria 2171
138 Ga0207665_10000138 3300025939 Bacteria 48709
139 Ga0207665_10078180 3300025939 Bacteria 2272
140 Ga0207691_10006511 3300025940 Bacteria 11271
141 Ga0207661_10236639 3300025944 Bacteria 1619
142 Ga0207679_10013019 3300025945 Bacteria 5442
143 Ga0207651_10009853 3300025960 Bacteria 5259
144 Ga0207668_11010625 3300025972 Bacteria 743
145 Ga0207640_10381075 3300025981 Bacteria 1143
146 Ga0207677_10311442 3300026023 Bacteria 1305
147 Ga0207678_10014886 3300026067 Bacteria 6841
148 Ga0207708_10026562 3300026075 Bacteria 4384
149 Ga0207702_10704777 3300026078 Bacteria 995
150 Ga0207648_10004013 3300026089 Bacteria 15276
151 Ga0207676_10267420 3300026095 Bacteria 1547
152 Ga0207674_10942287 3300026116 Bacteria 832
153 Ga0207675_100247570 3300026118 Bacteria 1724
154 Ga0207683_10015332 3300026121 Bacteria 6527
155 Ga0207698_10116184 3300026142 Bacteria 2255
156 Ga0207698_10628245 3300026142 Bacteria 1062
157 Ga0207698_10861890 3300026142 Bacteria 911
158 Ga0207428_10000023 3300027907 Bacteria 272062
159 Ga0268266_10000644 3300028379 Bacteria 47499
160 Ga0268266_10767168 3300028379 Bacteria 931
161 Ga0268265_10034875 3300028380 Plasmid 3671
162 Ga0307511_10144270 3300030521 Bacteria 1388
163 Ga0265329_10013310 3300031242 Bacteria 2936
164 Ga0265331_10051994 3300031250 Bacteria 1959
165 Ga0307408_100916322 3300031548 Unclassified 803
166 Ga0316579_10081375 3300031691 Bacteria 1542
167 Ga0316576_10036137 3300031727 Bacteria 3530
168 Ga0316578_10003821 3300031728 Bacteria 6977
169 Ga0316577_10000297 3300031733 Bacteria 18128
170 Ga0307413_10026150 3300031824 Bacteria 3212
171 Ga0307407_10200988 3300031903 Unclassified 1335
172 Ga0307407_10596372 3300031903 Bacteria 822
173 Ga0307412_10522549 3300031911 Bacteria 992
174 Ga0307409_100050411 3300031995 Bacteria 3179
175 Ga0307414_10184676 3300032004 Bacteria 1681
176 Ga0307411_10075485 3300032005 Bacteria 2301
177 Ga0316580_10032659 3300032139 Bacteria 1611
178 Ga0373935_0354220 3300035692 Bacteria 1047
179 Ga0316582_0293601 3300036647 Bacteria 1116
180 Ga0316584_0001324 3300036712 Bacteria 14659
181 Ga0373925_0086517 3300037068 Bacteria 2391
182 Ga0395899_0006677 3300037312 Bacteria 8938
183 Ga0395900_0013568 3300037418 Bacteria 8323
184 Ga0395898_0005236 3300037466 Bacteria 14018
185 Ga0395898_0850409 3300037466 Bacteria 852
186 Ga0395905_0009692 3300037471 Bacteria 9401
187 Ga0395901_0006281 3300038443 Bacteria 12039
188 Ga0395901_0011274 3300038443 Bacteria 9056
189 Ga0451791_1045318 3300041451 Bacteria 8622
190 Ga0451793_0890923 3300041452 Bacteria 3410
191 Ga0451793_1066433 3300041452 Bacteria 1598
192 Ga0451802_0335872 3300041460 Bacteria 1501
193 Ga0451807_1362346 3300041486 Bacteria 1313
194 Ga0451843_0617862 3300041509 Bacteria 654
195 Ga0451853_1604342 3300041512 Bacteria 2383
196 Ga0439446_0007932 3300042156 Bacteria 2805
197 Ga0495603_0208765 3300046455 Bacteria 1128
198 Ga0495582_0146461 3300046473 Bacteria 1340
199 Ga0496100_0007348 3300048903 Bacteria 6070
200 Ga0496100_0036311 3300048903 Bacteria 3107
201 Ga0496100_0045189 3300048903 Unclassified 2825
202 Ga0496101_0000685 3300048904 Bacteria 20428
203 Ga0496101_0090542 3300048904 Bacteria 2275
204 Ga0496101_0103237 3300048904 Bacteria 2136
205 Ga0496102_0034014 3300048905 Bacteria 4583
206 Ga0496102_0157972 3300048905 Bacteria 2132
207 Ga0496103_0013520 3300048906 Bacteria 4841
208 Ga0496104_0007479 3300048907 Bacteria 9654
209 Ga0496104_0023969 3300048907 Archaea 5613
210 Ga0496104_0034871 3300048907 Bacteria 4694
211 Ga0496105_0020122 3300048908 Bacteria 5389
212 Ga0496105_0025154 3300048908 Bacteria 4843
213 Ga0496105_0031511 3300048908 Bacteria 4347
214 Ga0496106_0010730 3300048909 Bacteria 6771
215 Ga0496106_0018715 3300048909 Bacteria 5129
216 Ga0496106_0022672 3300048909 Unclassified 4665
217 Ga0496107_0016227 3300048910 Bacteria 5227
218 Ga0496107_0038748 3300048910 Bacteria 3418
219 Ga0496107_0726626 3300048910 Unclassified 729
220 Ga0496108_0014714 3300048911 Archaea 6385
221 Ga0496108_0065388 3300048911 Bacteria 3066
222 Ga0496108_0128675 3300048911 Bacteria 2176
223 Ga0496109_0004678 3300048912 Bacteria 11424
224 Ga0496109_0008870 3300048912 Bacteria 8561
225 Ga0496109_0022298 3300048912 Bacteria 5608
226 Ga0496110_0003718 3300048913 Bacteria 11747
227 Ga0496110_0007347 3300048913 Bacteria 8797
228 Ga0496111_0039306 3300048914 Bacteria 3391
229 Ga0496111_0602908 3300048914 Bacteria 804
230 Ga0496112_0042217 3300048915 Unclassified 4461
231 Ga0496113_0014947 3300048916 Bacteria 5313
232 Ga0496113_0022470 3300048916 Bacteria 4462
233 Ga0496114_0000504 3300048917 Bacteria 28590
234 Ga0496114_0120291 3300048917 Unclassified 2258
235 Ga0496114_0666257 3300048917 Bacteria 914
236 Ga0496121_0362780 3300048924 Bacteria 961
237 Ga0501031_0336277 3300049568 Bacteria 978
238 Ga0501036_0763718 3300049572 Bacteria 797
239 Ga0501046_0970161 3300049580 Bacteria 591
240 Ga0501047_0415789 3300049581 Unclassified 1176
241 Ga0501048_0777689 3300049582 Bacteria 688
242 Ga0501072_0046238 3300049588 Bacteria 3425
243 Ga0501072_0203708 3300049588 Bacteria 1578
244 Ga0501074_0570066 3300049590 Bacteria 801
245 Ga0501075_0399870 3300049591 Bacteria 1047
246 Ga0501075_0476490 3300049591 Unclassified 952
247 Ga0501076_0733638 3300049592 Bacteria 815
248 Ga0501077_0195567 3300049593 Bacteria 1285
249 Ga0501079_0110803 3300049741 Bacteria 2133
250 Ga0501079_0310734 3300049741 Bacteria 1233
251 Ga0501080_0363879 3300049742 Bacteria 1305
252 Ga0501081_0137427 3300049743 Bacteria 1750
253 Ga0501081_0247600 3300049743 Bacteria 1300
254 Ga0501263_058508 3300049760 Unclassified 600
255 Ga0501045_0255992 3300049824 Bacteria 1303
256 Ga0501045_0454806 3300049824 Unclassified 952
257 nmdc:mga00v17_121907_c1 3300050491 Bacteria 1661
258 nmdc:mga0yw44_44409_c1 3300050492 Bacteria 2658
259 nmdc:mga05p37_834799_c1 3300050507 Unclassified 1003
260 nmdc:mga08y16_12_c1 3300050511 Bacteria 438455
261 nmdc:mga0n895_215995_c1 3300050512 Bacteria 1947
262 nmdc:mga0n895_730088_c1 3300050512 Bacteria 985
263 nmdc:mga0rr50_193539_c1 3300050513 Bacteria 1668
264 nmdc:mga0a205_256735_c1 3300050515 Bacteria 1626
265 nmdc:mga0a205_493846_c1 3300050515 Bacteria 1081
266 Ga0500647_0000421 3300053091 Bacteria 11092
267 Ga0500572_000145 3300053111 Bacteria 24334
268 Ga0500652_055309 3300053131 Bacteria 1626
269 Ga0500616_0036032 3300053153 Bacteria 2687
270 Ga0501084_0154373 3300054114 Bacteria 1936
271 Ga0501084_0286744 3300054114 Bacteria 1390
272 Ga0530510_0326607 3300061734 Bacteria 1150
273 Ga0530510_0521566 3300061734 Bacteria 901
274 8054568828 8054563764 Bacteria 5592885
275 Ga0075436_100522055
276 rootH2_10158474
277 Ga0065712_10338824
278 Ga0065707_10140188
279 Ga0065707_10175172
280 Ga0070658_10829904
281 Ga0070670_100512028
282 Ga0070666_10057319
283 Ga0070682_100031067
284 Ga0068868_100077993
285 Ga0068868_100357543
286 Ga0070689_100012739
287 Ga0070689_100141898
288 Ga0070687_100112089
289 Ga0070661_100549583
290 Ga0070668_100200075
291 Ga0070668_100828934
292 Ga0070669_100051993
293 Ga0070674_100030418
294 Ga0070674_100070628
295 Ga0070673_100072677
296 Ga0070688_100002321
297 Ga0070659_100748856
298 Ga0070667_100134565
299 Ga0070703_10000116
300 Ga0070703_10008369
301 Ga0070709_10009764
302 Ga0070714_100070950
303 Ga0070701_10005865
304 Ga0070705_100000052
305 Ga0070705_100006338
306 Ga0070694_100000804
307 Ga0070694_100087445
308 Ga0070694_100146813
309 Ga0070694_100288082
310 Ga0070694_100321273
311 Ga0070708_100068603
312 Ga0070678_100019288
313 Ga0070678_100189221
314 Ga0070678_100431362
315 Ga0070678_100595546
316 Ga0068867_100006968
317 Ga0068867_100348303
318 Ga0070706_100000408
319 Ga0070706_100529087
320 Ga0070707_100033172
321 Ga0070698_100860666
322 Ga0070684_100373403
323 Ga0070697_100090334
324 Ga0070672_100097289
325 Ga0070695_100003462
326 Ga0070695_100015994
327 Ga0070695_100114715
328 Ga0070695_100132396
329 Ga0070696_100052201
330 Ga0070693_100016029
331 Ga0070693_100028258
332 Ga0070693_100117025
333 Ga0070665_100000098
334 Ga0070665_100522131
335 Ga0070704_100003760
336 Ga0070704_100028206
337 Ga0070664_100911921
338 Ga0068857_101111616
339 Ga0068854_100055093
340 Ga0068856_100474216
341 Ga0070702_100100387
342 Ga0068852_100094348
343 Ga0068859_100126272
344 Ga0068859_100774309
345 Ga0068864_100272994
346 Ga0068866_10081753
347 Ga0068858_100019582
348 Ga0068860_100070219
349 Ga0068860_100888946
350 Ga0068862_100152834
351 Ga0081455_10044156
352 Ga0075364_10019975
353 Ga0070715_10006072
354 Ga0070716_100313969
355 Ga0070712_100061349
356 Ga0075362_10117900
357 Ga0097621_100024810
358 Ga0068871_100044296
359 Ga0068871_100047527
360 Ga0068871_100269504
361 Ga0075428_100000011
362 Ga0075428_100126939
363 Ga0075428_100575607
364 Ga0075433_10017342
365 Ga0075434_100461333
366 Ga0075434_100700487
367 Ga0075434_100760899
368 Ga0068865_100038887
369 Ga0068865_100761505
370 Ga0097620_100126274
371 Ga0097620_100774308
372 Ga0075435_100082372
373 Ga0111539_10000011
374 Ga0105245_10494281
375 Ga0114129_10038670
376 Ga0114129_10561734
377 Ga0105243_10006709
378 Ga0105242_10230568
379 Ga0105242_10424126
380 Ga0105242_10694270
381 Ga0105242_11016937
382 Ga0105035_101122
383 Ga0157378_10823534
384 Ga0163162_10710127
385 Ga0157372_10458962
386 Ga0157375_10648200
387 Ga0157515_122667
388 Ga0163163_10082911
389 Ga0163163_10321924
390 Ga0157380_10087958
391 Ga0157380_11126832
392 Ga0157376_10277529
393 Ga0163161_10655341
394 Ga0207697_10000304
395 Ga0207653_10000058
396 Ga0207653_10012590
397 Ga0207692_10008514
398 Ga0207688_10011146
399 Ga0207684_10000189
400 Ga0207660_10461376
401 Ga0207662_10002497
402 Ga0207649_10570961
403 Ga0207659_10105678
404 Ga0207659_10346637
405 Ga0207687_10421645
406 Ga0207700_10393226
407 Ga0207706_10039099
408 Ga0207709_10133953
409 Ga0207669_10003963
410 Ga0207669_10030348
411 Ga0207704_10074109
412 Ga0207665_10000138
413 Ga0207665_10078180
414 Ga0207691_10006511
415 Ga0207661_10236639
416 Ga0207679_10013019
417 Ga0207651_10009853
418 Ga0207668_11010625
419 Ga0207640_10381075
420 Ga0207677_10311442
421 Ga0207678_10014886
422 Ga0207708_10026562
423 Ga0207702_10704777
424 Ga0207648_10004013
425 Ga0207676_10267420
426 Ga0207674_10942287
427 Ga0207675_100247570
428 Ga0207683_10015332
429 Ga0207698_10116184
430 Ga0207698_10628245
431 Ga0207698_10861890
432 Ga0207428_10000023
433 Ga0268266_10000644
434 Ga0268266_10767168
435 Ga0268265_10034875
436 Ga0307511_10144270
437 Ga0265329_10013310
438 Ga0265331_10051994
439 Ga0307408_100916322
440 Ga0316579_10081375
441 Ga0316576_10036137
442 Ga0316578_10003821
443 Ga0316577_10000297
444 Ga0307413_10026150
445 Ga0307407_10200988
446 Ga0307407_10596372
447 Ga0307412_10522549
448 Ga0307409_100050411
449 Ga0307414_10184676
450 Ga0307411_10075485
451 Ga0316580_10032659
452 Ga0373935_0354220
453 Ga0316582_0293601
454 Ga0316584_0001324
455 Ga0373925_0086517
456 Ga0395899_0006677
457 Ga0395900_0013568
458 Ga0395898_0005236
459 Ga0395898_0850409
460 Ga0395905_0009692
461 Ga0395901_0006281
462 Ga0395901_0011274
463 Ga0451791_1045318
464 Ga0451793_0890923
465 Ga0451793_1066433
466 Ga0451802_0335872
467 Ga0451807_1362346
468 Ga0451843_0617862
469 Ga0451853_1604342
470 Ga0439446_0007932
471 Ga0495603_0208765
472 Ga0495582_0146461
473 Ga0496100_0007348
474 Ga0496100_0036311
475 Ga0496100_0045189
476 Ga0496101_0000685
477 Ga0496101_0090542
478 Ga0496101_0103237
479 Ga0496102_0034014
480 Ga0496102_0157972
481 Ga0496103_0013520
482 Ga0496104_0007479
483 Ga0496104_0023969
484 Ga0496104_0034871
485 Ga0496105_0020122
486 Ga0496105_0025154
487 Ga0496105_0031511
488 Ga0496106_0010730
489 Ga0496106_0018715
490 Ga0496106_0022672
491 Ga0496107_0016227
492 Ga0496107_0038748
493 Ga0496107_0726626
494 Ga0496108_0014714
495 Ga0496108_0065388
496 Ga0496108_0128675
497 Ga0496109_0004678
498 Ga0496109_0008870
499 Ga0496109_0022298
500 Ga0496110_0003718
501 Ga0496110_0007347
502 Ga0496111_0039306
503 Ga0496111_0602908
504 Ga0496112_0042217
505 Ga0496113_0014947
506 Ga0496113_0022470
507 Ga0496114_0000504
508 Ga0496114_0120291
509 Ga0496114_0666257
510 Ga0496121_0362780
511 Ga0501031_0336277
512 Ga0501036_0763718
513 Ga0501046_0970161
514 Ga0501047_0415789
515 Ga0501048_0777689
516 Ga0501072_0046238
517 Ga0501072_0203708
518 Ga0501074_0570066
519 Ga0501075_0399870
520 Ga0501075_0476490
521 Ga0501076_0733638
522 Ga0501077_0195567
523 Ga0501079_0110803
524 Ga0501079_0310734
525 Ga0501080_0363879
526 Ga0501081_0137427
527 Ga0501081_0247600
528 Ga0501263_058508
529 Ga0501045_0255992
530 Ga0501045_0454806
531 nmdc:mga00v17_121907_c1
532 nmdc:mga0yw44_44409_c1
533 nmdc:mga05p37_834799_c1
534 nmdc:mga08y16_12_c1
535 nmdc:mga0n895_215995_c1
536 nmdc:mga0n895_730088_c1
537 nmdc:mga0rr50_193539_c1
538 nmdc:mga0a205_256735_c1
539 nmdc:mga0a205_493846_c1
540 Ga0500647_0000421
541 Ga0500572_000145
542 Ga0500652_055309
543 Ga0500616_0036032
544 Ga0501084_0154373
545 Ga0501084_0286744
546 Ga0530510_0326607
547 Ga0530510_0521566
548 8054568828

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00908

dTDP_sugar_isom

dTDP-4-dehydrorhamnose 3,5-epimerase

21

192

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
6c46-assembly3.cif.gz_E-2 crystal structure of dtdp-4-dehydrorhamnose 3,5-epimerase from elizabethkingia anophelis nuhp1 0.9749 1 174
6c46-assembly3.cif.gz_E-2 crystal structure of dtdp-4-dehydrorhamnose 3,5-epimerase from elizabethkingia anophelis nuhp1 0.964 1 174
7pvi-assembly1.cif.gz_BBB dtdp-sugar epimerase 0.9624 2 173
6c46-assembly2.cif.gz_C crystal structure of dtdp-4-dehydrorhamnose 3,5-epimerase from elizabethkingia anophelis nuhp1 0.9622 1 174
3ryk-assembly1.cif.gz_B 1.63 angstrom resolution crystal structure of dtdp-4-dehydrorhamnose 3,5-epimerase (rfbc) from bacillus anthracis str. ames with tdp and ppi bound 0.9597 2 174
ID Description Score Start End Superfamily
5buvB00 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9482 2 174 2.60.120.10
1epzA00 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9437 2 173 2.60.120.10
6dinA00 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9403 2 174 2.60.120.10
2c0zA01 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9395 1 173 2.60.120.10
2ixcB00 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9393 1 173 2.60.120.10
ID Description Score Start End GO Terms
AF-A0A1Q6VP32-F1-model_v4 dTDP-4-dehydrorhamnose 3,5-epimerase 1 1 145 GO:0005829
GO:0008830
GO:0019305
GO:0045226
AF-A0A536SWI1-F1-model_v4 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) (Thymidine diphospho-4-keto-rhamnose 3,5-epimerase) 0.9998 1 173 GO:0005829
GO:0008830
GO:0019305
GO:0045226
AF-W4SGX0-F1-model_v4 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) (Thymidine diphospho-4-keto-rhamnose 3,5-epimerase) (dTDP-4-keto-6-deoxyglucose 3,5-epimerase) (dTDP-6-deoxy-D-xylo-4-hexulose 3,5-epimerase) 0.9987 45 175 GO:0005829
GO:0008830
GO:0019305
GO:0045226
AF-A0A383T4G5-F1-model_v4 deleted 0.9986 45 175
AF-A0A1R3X2U9-F1-model_v4 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) (Thymidine diphospho-4-keto-rhamnose 3,5-epimerase) 0.9977 2 173 GO:0005829
GO:0008830
GO:0019305
GO:0045226

Map