F379445

General Info

Members Datasets Scaffolds Average Seq Length
274 206 548 335

Family's Representative Sequence

Representative Sequence 3300003575|Ga0007409J51694_1052290|Ga0007409J51694_10522901
Length 377
Sequence VRTDVFAVANYGKINNQLDNPLAFKTDFMTTWLQFLARHGAHLSDENQSQVQNFGTGSAGTPTTDFVAPLTDLGLIALTGEDAAHFLHNQITNDVENLNANEARLAGYCSPKGRLLATFLMWRSADAIMLQLPREIQASIQKRLQMFVLRAKTKLADATDTHVALGLVGPTAAATLAKWFPSMPAAPYAKVQFEAGILIRMADASGTPRYQWITSQAIAEDAWPDLVEKLSPVGPSAWRLTDIHAGIPQIRQATQEQFVPQMVNFELVGGVNFKKGCYPGQEIVARSQYLGKLKRRMMYASIAAQEVKPGMEIFSIADPEQPCGMVVNAEASSQNETACLVEIKIAAAEAGSVHLGSASGVTLQFKPLPYAFLPDPA

Samples

Sample ID Description Type Environment
1 3300003575 Grassland soil microbial communities from Hopland, California, USA - Sample H1_Rhizo_25 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
2 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
3 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
4 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
5 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
6 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
7 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
8 3300003577 Grassland soil microbial communities from Hopland, California, USA - Sample H2_Rhizo_32 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
9 3300003693 Avena fatua rhizosphere microbial communities - H2_Rhizo_Litter_49 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
10 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
11 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
12 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
13 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
14 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
15 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
16 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
17 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
18 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
19 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
20 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
21 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
22 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
23 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
24 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
25 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
26 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
27 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
28 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
29 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
30 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
31 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
34 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
35 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
36 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
37 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
38 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
41 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
42 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
43 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
45 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
46 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
47 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
48 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
49 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
50 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
51 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
52 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
53 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
54 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
55 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
56 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
57 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
58 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
59 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
60 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
61 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
62 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
69 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
70 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
72 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
73 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
75 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
76 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
77 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
79 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
80 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
81 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
82 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
102 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
103 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
104 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
105 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
106 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
107 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
108 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
109 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
110 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
111 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
112 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
113 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
114 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
115 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
116 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
117 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
118 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
119 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
120 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
121 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
122 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
123 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
124 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
125 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
126 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
127 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
128 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
129 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
130 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
131 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
132 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
133 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
134 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
135 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
136 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
137 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
138 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
139 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
140 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
141 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
142 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
143 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
144 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
145 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
146 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
147 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
148 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
149 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
150 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
151 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
152 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
153 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
154 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
155 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
156 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
157 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
158 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
159 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
160 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
161 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
162 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
163 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
164 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
165 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
166 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
167 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
168 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
169 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
170 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
171 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
172 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
173 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
174 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
175 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
176 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
177 3300060346 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 169R_CW_T3_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
178 2511231003 Herbaspirillum sp. CF444 Isolate Rhizosphere
179 2511231026 Herbaspirillum sp. YR522 Isolate Rhizosphere
180 2521172590 Herbaspirillum sp. GW103 Isolate Rhizosphere
181 2551306416 Herbaspirillum seropedicae Os34 Isolate Unclassified
182 2643221603 Noviherbaspirillum sp. Root189 Isolate Unclassified
183 2765235838 Herbaspirillum robiniae AA6 Isolate Unclassified
184 2808606386 Herbaspirillum sp. SJZ099 Isolate Rhizosphere
185 2808606415 Herbaspirillum sp. SJZ130 Isolate Rhizosphere
186 2808606419 Herbaspirillum sp. SJZ106 Isolate Rhizosphere
187 2818991436 Collimonas arenae 515 Isolate Unclassified
188 2818991445 Herbaspirillum hiltneri 3195 Isolate Unclassified
189 2818991449 Herbaspirillum huttiense 1147 Isolate Unclassified
190 2839094727 Herbaspirillum robiniae HZ10 Isolate Nodule
191 2842711865 Duganella sp. R-73148 Isolate Unclassified
192 2852618963 Herbaspirillum sp. SJZ102 Isolate Rhizosphere
193 2884811622 Herbaspirillum sp. 3C11 Isolate Unclassified
194 2884836552 Herbaspirillum sp. 3R-11 Isolate Unclassified
195 2884852848 Herbaspirillum sp. 3R11 Isolate Unclassified
196 2885080285 Janthinobacterium sp. AD80 Isolate Rhizosphere
197 2896154374 Herbaspirillum sp. 3R-3a1 Isolate Nodule
198 2904439833 Herbaspirillum sp. 1589 Isolate Rhizosphere
199 2904530477 Herbaspirillum huttiense 611 Isolate Unclassified
200 2904584206 Herbaspirillum sp. 1050 Isolate Unclassified
201 2904589729 Herbaspirillum sp. 1130 Isolate Unclassified
202 2904601388 Herbaspirillum sp. 1273 Isolate Rhizosphere
203 2919046199 Herbaspirillum frisingense 596 Isolate Unclassified
204 2919079590 Herbaspirillum sp. 1173 Isolate Unclassified
205 2923510766 Herbaspirillum rubrisubalbicans SLBN-127 Isolate Rhizosphere
206 2928130867 Herbaspirillum seropedicae 1977 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 87.96
Metatranscriptomes 1.46
Isolates 10.58

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 18.98
Nodule 1.46
Rhizoplane 2.55
Rhizosphere 61.31
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0007409J51694_1052290 3300003575 Bacteria 1569
2 JGI25156J39149_1000398 3300002705 Bacteria 27303
3 JGI25162J39368_1000015 3300002737 Bacteria 316381
4 JGI25154J39366_1000349 3300002738 Bacteria 26415
5 JGI25154J39366_1000405 3300002738 Bacteria 23503
6 JGI25157J39369_1000105 3300002741 Bacteria 71453
7 JGI25151J46595_10001553 3300003187 Bacteria 15323
8 JGI25165J46597_1000001 3300003214 Bacteria 1111887
9 Ga0007416J51690_1054340 3300003577 Bacteria 2281
10 Ga0032354_1079836 3300003693 Bacteria 1631
11 Ga0055538_1000001 3300003751 Bacteria 1111887
12 Ga0055538_1000020 3300003751 Bacteria 264193
13 Ga0055539_1000001 3300003752 Bacteria 1111887
14 Ga0055539_1000025 3300003752 Bacteria 264193
15 Ga0055533_1000003 3300003756 Bacteria 1111887
16 Ga0055533_1000034 3300003756 Bacteria 264193
17 Ga0055532_1000051 3300003758 Bacteria 165365
18 Ga0055525_1000003 3300003759 Bacteria 962094
19 Ga0055525_1000044 3300003759 Bacteria 264193
20 Ga0055526_1000040 3300003771 Bacteria 129879
21 Ga0055524_1000647 3300003775 Bacteria 24696
22 Ga0055534_1001284 3300003784 Bacteria 10188
23 Ga0055541_1000001 3300003841 Bacteria 1111887
24 Ga0055541_1000019 3300003841 Bacteria 264193
25 Ga0070676_10032497 3300005328 Bacteria 2990
26 Ga0070683_100015906 3300005329 Bacteria 6619
27 Ga0070683_100077714 3300005329 Bacteria 3104
28 Ga0070683_100088599 3300005329 Bacteria 2904
29 Ga0070670_100003396 3300005331 Bacteria 13197
30 Ga0070677_10024686 3300005333 Bacteria 2238
31 Ga0070661_100020528 3300005344 Bacteria 4713
32 Ga0070661_100106142 3300005344 Bacteria 2094
33 Ga0070675_100090348 3300005354 Bacteria 2565
34 Ga0070671_100230949 3300005355 Bacteria 1570
35 Ga0070673_100036781 3300005364 Bacteria 3725
36 Ga0070659_100006121 3300005366 Bacteria 8683
37 Ga0070667_100482669 3300005367 Bacteria 1135
38 Ga0070678_100004923 3300005456 Bacteria 7640
39 Ga0068853_100119592 3300005539 Bacteria 2348
40 Ga0070672_100002387 3300005543 Bacteria 11886
41 Ga0070665_100133654 3300005548 Bacteria 2483
42 Ga0068855_100000396 3300005563 Bacteria 53739
43 Ga0068855_100555247 3300005563 Bacteria 1243
44 Ga0068855_100682053 3300005563 Bacteria 1101
45 Ga0070664_100153842 3300005564 Bacteria 2031
46 Ga0070664_100154299 3300005564 Bacteria 2028
47 Ga0070664_100372533 3300005564 Bacteria 1302
48 Ga0068857_100269440 3300005577 Bacteria 1565
49 Ga0068854_100009954 3300005578 Bacteria 6154
50 Ga0068864_100007343 3300005618 Bacteria 9068
51 Ga0068863_100047596 3300005841 Bacteria 4067
52 Ga0068863_100107237 3300005841 Bacteria 2658
53 Ga0068860_100038019 3300005843 Bacteria 4606
54 Ga0075362_10001761 3300006177 Bacteria 7050
55 Ga0075369_10005827 3300006186 Bacteria 4629
56 Ga0075366_10089537 3300006195 Bacteria 1843
57 Ga0097621_100005695 3300006237 Bacteria 8798
58 Ga0079104_1011449 3300006946 Bacteria 2851
59 Ga0105240_10000729 3300009093 Bacteria 60131
60 Ga0105240_10215914 3300009093 Bacteria 2238
61 Ga0105241_10453337 3300009174 Bacteria 1135
62 Ga0105237_10025798 3300009545 Bacteria 6009
63 Ga0105238_10000104 3300009551 Bacteria 94726
64 Ga0105238_10045828 3300009551 Bacteria 4417
65 Ga0105239_10031244 3300010375 Bacteria 5858
66 Ga0157373_10035211 3300013100 Bacteria 3595
67 Ga0157369_10043540 3300013105 Bacteria 4893
68 Ga0157374_10006078 3300013296 Bacteria 10217
69 Ga0157374_10015753 3300013296 Bacteria 6640
70 Ga0157374_10041943 3300013296 Bacteria 4220
71 Ga0163162_10301654 3300013306 Bacteria 1734
72 Ga0157372_10004940 3300013307 Bacteria 14159
73 Ga0182008_10032700 3300014497 Bacteria 2612
74 Ga0182006_1001096 3300015261 Bacteria 17333
75 Ga0182006_1019434 3300015261 Bacteria 2859
76 Ga0182007_10007924 3300015262 Bacteria 4404
77 Ga0182007_10041417 3300015262 Bacteria 1536
78 Ga0182005_1001541 3300015265 Bacteria 9155
79 Ga0163161_10232690 3300017792 Bacteria 1430
80 Ga0213872_10021017 3300021361 Bacteria 3005
81 Ga0209435_100028 3300025206 Bacteria 182520
82 Ga0209435_100037 3300025206 Bacteria 124928
83 Ga0209435_100153 3300025206 Bacteria 22460
84 Ga0209784_100002 3300025224 Bacteria 1753105
85 Ga0209784_100004 3300025224 Bacteria 1378156
86 Ga0209566_100003 3300025225 Bacteria 1753105
87 Ga0209566_100004 3300025225 Bacteria 1531866
88 Ga0209674_100004 3300025226 Bacteria 1753105
89 Ga0209674_100006 3300025226 Bacteria 1531866
90 Ga0209672_103759 3300025228 Bacteria 3022
91 Ga0209147_100004 3300025229 Bacteria 1371850
92 Ga0209563_100006 3300025230 Bacteria 1753105
93 Ga0209563_100009 3300025230 Bacteria 1378156
94 Ga0207427_100238 3300025231 Bacteria 44888
95 Ga0209437_100004 3300025233 Bacteria 1378156
96 Ga0209437_100053 3300025233 Bacteria 375580
97 Ga0209258_100398 3300025242 Bacteria 54737
98 Ga0209646_1000021 3300025246 Bacteria 461083
99 Ga0209646_1000095 3300025246 Bacteria 182520
100 Ga0209026_1000110 3300025250 Bacteria 141989
101 Ga0209026_1004457 3300025250 Bacteria 4140
102 Ga0209677_100003 3300025253 Bacteria 1753105
103 Ga0209677_100005 3300025253 Bacteria 1378156
104 Ga0209759_1000080 3300025256 Bacteria 171186
105 Ga0209759_1000115 3300025256 Bacteria 141877
106 Ga0209233_1000005 3300025261 Bacteria 1531866
107 Ga0209565_1000066 3300025263 Bacteria 173062
108 Ga0209455_1002736 3300025272 Bacteria 6618
109 Ga0209675_1002442 3300025291 Bacteria 9550
110 Ga0209025_1003952 3300025294 Bacteria 13303
111 Ga0209564_1000096 3300025295 Bacteria 232165
112 Ga0209564_1001787 3300025295 Bacteria 19890
113 Ga0209256_1001560 3300025299 Bacteria 22629
114 Ga0207695_10002864 3300025913 Bacteria 25056
115 Ga0207695_10061818 3300025913 Bacteria 3869
116 Ga0207671_10248969 3300025914 Bacteria 1397
117 Ga0207657_10004895 3300025919 Bacteria 14085
118 Ga0207649_10012078 3300025920 Bacteria 4779
119 Ga0207694_10001090 3300025924 Bacteria 23543
120 Ga0207659_10009813 3300025926 Bacteria 5993
121 Ga0207644_10035921 3300025931 Bacteria 3476
122 Ga0207644_10167482 3300025931 Bacteria 1713
123 Ga0207690_10004042 3300025932 Bacteria 8663
124 Ga0207691_10001319 3300025940 Bacteria 24755
125 Ga0207679_10030512 3300025945 Bacteria 3765
126 Ga0207679_10078018 3300025945 Bacteria 2522
127 Ga0207679_10471345 3300025945 Bacteria 1116
128 Ga0207667_10000032 3300025949 Bacteria 322253
129 Ga0207667_10030868 3300025949 Bacteria 5791
130 Ga0207640_10019551 3300025981 Bacteria 4004
131 Ga0207658_10423514 3300025986 Bacteria 1174
132 Ga0207639_10366584 3300026041 Bacteria 1290
133 Ga0207641_10039250 3300026088 Bacteria 3959
134 Ga0207676_10284599 3300026095 Bacteria 1502
135 Ga0207674_10273516 3300026116 Bacteria 1637
136 Ga0207683_10007307 3300026121 Bacteria 9466
137 Ga0207698_10016943 3300026142 Bacteria 4929
138 Ga0209281_1007025 3300027111 Bacteria 2856
139 Ga0373955_0202436 3300035172 Bacteria 1182
140 Ga0373961_0074669 3300035241 Bacteria 1055
141 Ga0395899_0000929 3300037312 Bacteria 27587
142 Ga0395899_0003941 3300037312 Bacteria 11694
143 Ga0395899_0012374 3300037312 Bacteria 6532
144 Ga0395900_0001967 3300037418 Bacteria 23210
145 Ga0395900_0069841 3300037418 Bacteria 3611
146 Ga0395900_0248638 3300037418 Bacteria 1780
147 Ga0395905_0007236 3300037471 Bacteria 11057
148 Ga0395905_0007255 3300037471 Bacteria 11044
149 Ga0395905_0412447 3300037471 Bacteria 1246
150 Ga0395901_0035877 3300038443 Bacteria 5124
151 Ga0395901_0148027 3300038443 Bacteria 2467
152 Ga0436361_0210537 3300039447 Bacteria 10892
153 Ga0436361_0502923 3300039447 Bacteria 23220
154 Ga0451577_0001685 3300042876 Bacteria 28537
155 Ga0466972_0000094 3300044658 Bacteria 78156
156 Ga0466972_0032465 3300044658 Bacteria 2563
157 Ga0466965_0001767 3300044683 Bacteria 8933
158 Ga0466965_0078001 3300044683 Bacteria 1673
159 Ga0466966_0005038 3300044684 Bacteria 8685
160 Ga0466964_0016810 3300044706 Bacteria 2796
161 Ga0466964_0018476 3300044706 Bacteria 2676
162 Ga0453684_0005726 3300044712 Bacteria 24318
163 Ga0466968_0017673 3300044735 Bacteria 2854
164 Ga0466970_0038703 3300044765 Bacteria 2530
165 Ga0466959_0015010 3300045049 Bacteria 5644
166 Ga0495617_000001 3300046452 Bacteria 877032
167 Ga0495629_0091999 3300046459 Bacteria 2117
168 Ga0495638_0013687 3300046460 Bacteria 5512
169 Ga0495650_0000932 3300046471 Bacteria 33965
170 Ga0495605_0000073 3300046474 Bacteria 131765
171 Ga0495584_0014128 3300046491 Bacteria 4069
172 Ga0495584_0014842 3300046491 Bacteria 3970
173 Ga0495607_0076589 3300046501 Bacteria 1850
174 Ga0495606_0000049 3300046507 Bacteria 204038
175 Ga0495606_0005026 3300046507 Bacteria 12882
176 Ga0495606_0020091 3300046507 Bacteria 4938
177 Ga0495608_0010355 3300046511 Bacteria 6507
178 Ga0495610_0000999 3300046512 Bacteria 26087
179 Ga0495618_0008945 3300046514 Bacteria 6043
180 Ga0495628_0002678 3300046516 Bacteria 15936
181 Ga0495628_0100292 3300046516 Bacteria 2235
182 Ga0495643_0030673 3300046522 Bacteria 3000
183 Ga0495652_0052033 3300046529 Bacteria 3494
184 Ga0495609_0003888 3300046538 Bacteria 8384
185 Ga0495597_0000637 3300046542 Bacteria 28628
186 Ga0495645_0002160 3300046543 Bacteria 13350
187 Ga0495645_0328515 3300046543 Bacteria 991
188 Ga0495622_0067011 3300046557 Bacteria 1659
189 Ga0495633_0014564 3300046558 Bacteria 4106
190 Ga0495633_0026454 3300046558 Bacteria 2847
191 Ga0495633_0058534 3300046558 Bacteria 1808
192 Ga0495668_0000077 3300046616 Bacteria 159120
193 Ga0495625_0005097 3300046660 Bacteria 12155
194 Ga0495625_0040404 3300046660 Bacteria 3402
195 Ga0495635_0063167 3300046663 Bacteria 2543
196 Ga0495661_0041954 3300046665 Bacteria 2825
197 Ga0495599_0052046 3300046678 Bacteria 2565
198 Ga0495646_0009478 3300046680 Bacteria 6179
199 Ga0495646_0037654 3300046680 Bacteria 2990
200 Ga0495647_0013176 3300046681 Bacteria 2861
201 Ga0495658_0061175 3300046683 Bacteria 2161
202 Ga0495624_0092847 3300046690 Bacteria 1861
203 Ga0495600_0004495 3300046809 Bacteria 8357
204 Ga0495604_0026722 3300047317 Bacteria 4594
205 Ga0495674_0168267 3300047319 Bacteria 1830
206 Ga0495672_0000304 3300047320 Bacteria 66316
207 Ga0495673_0000003 3300047469 Bacteria 1491337
208 Ga0495684_0085505 3300047471 Bacteria 2392
209 Ga0495686_0000593 3300047472 Bacteria 50448
210 Ga0495686_0074949 3300047472 Bacteria 2075
211 Ga0495626_0000018 3300048091 Bacteria 230153
212 Ga0496102_0016174 3300048905 Bacteria 6517
213 Ga0496108_0035275 3300048911 Bacteria 4157
214 Ga0496108_0224502 3300048911 Bacteria 1632
215 Ga0496109_0068671 3300048912 Bacteria 3248
216 Ga0496110_0054044 3300048913 Bacteria 3532
217 Ga0496110_0170950 3300048913 Bacteria 1972
218 Ga0496114_0017325 3300048917 Bacteria 5814
219 Ga0496116_0019445 3300048919 Bacteria 5200
220 Ga0496116_0042380 3300048919 Bacteria 3112
221 Ga0496118_0130543 3300048921 Bacteria 1614
222 Ga0496121_0010164 3300048924 Bacteria 10657
223 Ga0496121_0088911 3300048924 Bacteria 2420
224 Ga0496121_0137786 3300048924 Bacteria 1815
225 Ga0496122_0000686 3300048925 Bacteria 67419
226 Ga0496123_0000646 3300048926 Bacteria 58096
227 Ga0496124_0047660 3300048927 Bacteria 3665
228 Ga0496124_0253680 3300048927 Bacteria 1299
229 Ga0496125_0000470 3300048928 Bacteria 71884
230 Ga0496125_0000717 3300048928 Bacteria 54887
231 Ga0496125_0057412 3300048928 Bacteria 3152
232 Ga0496126_0093091 3300048929 Bacteria 2647
233 Ga0495682_0030707 3300049460 Bacteria 1987
234 Ga0501044_0423602 3300049823 Bacteria 1241
235 Ga0495601_0004728 3300053077 Bacteria 7892
236 Ga0495601_0039821 3300053077 Bacteria 2943
237 Ga0500595_004903 3300053119 Bacteria 5920
238 Ga0500607_016101 3300053121 Bacteria 4295
239 Ga0500618_000450 3300053125 Bacteria 26807
240 Ga0500618_001783 3300053125 Bacteria 9089
241 Ga0500586_000161 3300053145 Bacteria 12443
242 Ga0500619_001616 3300053154 Bacteria 4052
243 Ga0500636_0003340 3300053177 Bacteria 9018
244 Ga0500637_0004422 3300053178 Bacteria 6668
245 Ga0587111_0014730 3300060346 Bacteria 1418
246 2511248651 2511231003 Bacteria 5606035
247 2511384635 2511231026 Bacteria 5225445
248 2521558605 2521172590 Bacteria 5047645
249 2553004328 2551306416 Bacteria 6152985
250 2644030096 2643221603 Bacteria 6147767
251 2765569714 2765235838 Bacteria 5445269
252 2808981908 2808606386 Bacteria 4471946
253 2809131531 2808606415 Bacteria 4576710
254 2809151153 2808606419 Bacteria 4576925
255 2819540922 2818991436 Bacteria 5376622
256 2819593084 2818991445 Bacteria 4955017
257 2819614168 2818991449 Bacteria 5518009
258 2839097364 2839094727 Bacteria 5534556
259 2842713527 2842711865 Bacteria 7155354
260 2852622565 2852618963 Bacteria 4577824
261 2884812518 2884811622 Bacteria 5552861
262 2884838046 2884836552 Bacteria 5219991
263 2884854339 2884852848 Bacteria 5221161
264 2885084972 2885080285 Bacteria 6355622
265 2896154545 2896154374 Bacteria 5221518
266 2904444119 2904439833 Bacteria 5931679
267 2904534340 2904530477 Bacteria 5876334
268 2904584231 2904584206 Bacteria 6028872
269 2904590700 2904589729 Bacteria 6113573
270 2904603461 2904601388 Bacteria 5884906
271 2919047034 2919046199 Bacteria 5567169
272 2919080535 2919079590 Bacteria 5946433
273 2923512166 2923510766 Bacteria 5926163
274 2928131829 2928130867 Bacteria 5467269
275 Ga0007409J51694_1052290
276 JGI25156J39149_1000398
277 JGI25162J39368_1000015
278 JGI25154J39366_1000349
279 JGI25154J39366_1000405
280 JGI25157J39369_1000105
281 JGI25151J46595_10001553
282 JGI25165J46597_1000001
283 Ga0007416J51690_1054340
284 Ga0032354_1079836
285 Ga0055538_1000001
286 Ga0055538_1000020
287 Ga0055539_1000001
288 Ga0055539_1000025
289 Ga0055533_1000003
290 Ga0055533_1000034
291 Ga0055532_1000051
292 Ga0055525_1000003
293 Ga0055525_1000044
294 Ga0055526_1000040
295 Ga0055524_1000647
296 Ga0055534_1001284
297 Ga0055541_1000001
298 Ga0055541_1000019
299 Ga0070676_10032497
300 Ga0070683_100015906
301 Ga0070683_100077714
302 Ga0070683_100088599
303 Ga0070670_100003396
304 Ga0070677_10024686
305 Ga0070661_100020528
306 Ga0070661_100106142
307 Ga0070675_100090348
308 Ga0070671_100230949
309 Ga0070673_100036781
310 Ga0070659_100006121
311 Ga0070667_100482669
312 Ga0070678_100004923
313 Ga0068853_100119592
314 Ga0070672_100002387
315 Ga0070665_100133654
316 Ga0068855_100000396
317 Ga0068855_100555247
318 Ga0068855_100682053
319 Ga0070664_100153842
320 Ga0070664_100154299
321 Ga0070664_100372533
322 Ga0068857_100269440
323 Ga0068854_100009954
324 Ga0068864_100007343
325 Ga0068863_100047596
326 Ga0068863_100107237
327 Ga0068860_100038019
328 Ga0075362_10001761
329 Ga0075369_10005827
330 Ga0075366_10089537
331 Ga0097621_100005695
332 Ga0079104_1011449
333 Ga0105240_10000729
334 Ga0105240_10215914
335 Ga0105241_10453337
336 Ga0105237_10025798
337 Ga0105238_10000104
338 Ga0105238_10045828
339 Ga0105239_10031244
340 Ga0157373_10035211
341 Ga0157369_10043540
342 Ga0157374_10006078
343 Ga0157374_10015753
344 Ga0157374_10041943
345 Ga0163162_10301654
346 Ga0157372_10004940
347 Ga0182008_10032700
348 Ga0182006_1001096
349 Ga0182006_1019434
350 Ga0182007_10007924
351 Ga0182007_10041417
352 Ga0182005_1001541
353 Ga0163161_10232690
354 Ga0213872_10021017
355 Ga0209435_100028
356 Ga0209435_100037
357 Ga0209435_100153
358 Ga0209784_100002
359 Ga0209784_100004
360 Ga0209566_100003
361 Ga0209566_100004
362 Ga0209674_100004
363 Ga0209674_100006
364 Ga0209672_103759
365 Ga0209147_100004
366 Ga0209563_100006
367 Ga0209563_100009
368 Ga0207427_100238
369 Ga0209437_100004
370 Ga0209437_100053
371 Ga0209258_100398
372 Ga0209646_1000021
373 Ga0209646_1000095
374 Ga0209026_1000110
375 Ga0209026_1004457
376 Ga0209677_100003
377 Ga0209677_100005
378 Ga0209759_1000080
379 Ga0209759_1000115
380 Ga0209233_1000005
381 Ga0209565_1000066
382 Ga0209455_1002736
383 Ga0209675_1002442
384 Ga0209025_1003952
385 Ga0209564_1000096
386 Ga0209564_1001787
387 Ga0209256_1001560
388 Ga0207695_10002864
389 Ga0207695_10061818
390 Ga0207671_10248969
391 Ga0207657_10004895
392 Ga0207649_10012078
393 Ga0207694_10001090
394 Ga0207659_10009813
395 Ga0207644_10035921
396 Ga0207644_10167482
397 Ga0207690_10004042
398 Ga0207691_10001319
399 Ga0207679_10030512
400 Ga0207679_10078018
401 Ga0207679_10471345
402 Ga0207667_10000032
403 Ga0207667_10030868
404 Ga0207640_10019551
405 Ga0207658_10423514
406 Ga0207639_10366584
407 Ga0207641_10039250
408 Ga0207676_10284599
409 Ga0207674_10273516
410 Ga0207683_10007307
411 Ga0207698_10016943
412 Ga0209281_1007025
413 Ga0373955_0202436
414 Ga0373961_0074669
415 Ga0395899_0000929
416 Ga0395899_0003941
417 Ga0395899_0012374
418 Ga0395900_0001967
419 Ga0395900_0069841
420 Ga0395900_0248638
421 Ga0395905_0007236
422 Ga0395905_0007255
423 Ga0395905_0412447
424 Ga0395901_0035877
425 Ga0395901_0148027
426 Ga0436361_0210537
427 Ga0436361_0502923
428 Ga0451577_0001685
429 Ga0466972_0000094
430 Ga0466972_0032465
431 Ga0466965_0001767
432 Ga0466965_0078001
433 Ga0466966_0005038
434 Ga0466964_0016810
435 Ga0466964_0018476
436 Ga0453684_0005726
437 Ga0466968_0017673
438 Ga0466970_0038703
439 Ga0466959_0015010
440 Ga0495617_000001
441 Ga0495629_0091999
442 Ga0495638_0013687
443 Ga0495650_0000932
444 Ga0495605_0000073
445 Ga0495584_0014128
446 Ga0495584_0014842
447 Ga0495607_0076589
448 Ga0495606_0000049
449 Ga0495606_0005026
450 Ga0495606_0020091
451 Ga0495608_0010355
452 Ga0495610_0000999
453 Ga0495618_0008945
454 Ga0495628_0002678
455 Ga0495628_0100292
456 Ga0495643_0030673
457 Ga0495652_0052033
458 Ga0495609_0003888
459 Ga0495597_0000637
460 Ga0495645_0002160
461 Ga0495645_0328515
462 Ga0495622_0067011
463 Ga0495633_0014564
464 Ga0495633_0026454
465 Ga0495633_0058534
466 Ga0495668_0000077
467 Ga0495625_0005097
468 Ga0495625_0040404
469 Ga0495635_0063167
470 Ga0495661_0041954
471 Ga0495599_0052046
472 Ga0495646_0009478
473 Ga0495646_0037654
474 Ga0495647_0013176
475 Ga0495658_0061175
476 Ga0495624_0092847
477 Ga0495600_0004495
478 Ga0495604_0026722
479 Ga0495674_0168267
480 Ga0495672_0000304
481 Ga0495673_0000003
482 Ga0495684_0085505
483 Ga0495686_0000593
484 Ga0495686_0074949
485 Ga0495626_0000018
486 Ga0496102_0016174
487 Ga0496108_0035275
488 Ga0496108_0224502
489 Ga0496109_0068671
490 Ga0496110_0054044
491 Ga0496110_0170950
492 Ga0496114_0017325
493 Ga0496116_0019445
494 Ga0496116_0042380
495 Ga0496118_0130543
496 Ga0496121_0010164
497 Ga0496121_0088911
498 Ga0496121_0137786
499 Ga0496122_0000686
500 Ga0496123_0000646
501 Ga0496124_0047660
502 Ga0496124_0253680
503 Ga0496125_0000470
504 Ga0496125_0000717
505 Ga0496125_0057412
506 Ga0496126_0093091
507 Ga0495682_0030707
508 Ga0501044_0423602
509 Ga0495601_0004728
510 Ga0495601_0039821
511 Ga0500595_004903
512 Ga0500607_016101
513 Ga0500618_000450
514 Ga0500618_001783
515 Ga0500586_000161
516 Ga0500619_001616
517 Ga0500636_0003340
518 Ga0500637_0004422
519 Ga0587111_0014730
520 2511248651
521 2511384635
522 2521558605
523 2553004328
524 2644030096
525 2765569714
526 2808981908
527 2809131531
528 2809151153
529 2819540922
530 2819593084
531 2819614168
532 2839097364
533 2842713527
534 2852622565
535 2884812518
536 2884838046
537 2884854339
538 2885084972
539 2896154545
540 2904444119
541 2904534340
542 2904584231
543 2904590700
544 2904603461
545 2919047034
546 2919080535
547 2923512166
548 2928131829

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01571

GCV_T

Aminomethyltransferase folate-binding domain

68

268

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
1vly-assembly1.cif.gz_A crystal structure of a putative aminomethyltransferase (ygfz) from escherichia coli at 1.30 a resolution 0.9019 27 341
1vly-assembly1.cif.gz_A crystal structure of a putative aminomethyltransferase (ygfz) from escherichia coli at 1.30 a resolution 0.8701 27 341
1yx2-assembly1.cif.gz_A crystal structure of the probable aminomethyltransferase from bacillus subtilis 0.8383 32 338
7z3h-assembly4.cif.gz_D crystal structure of iba57 from chaetomium thermophilum 0.7837 29 337
3ttg-assembly1.cif.gz_A crystal structure of putative aminomethyltransferase from leptospirillum rubarum 0.7834 8 339
ID Description Score Start End Superfamily
1vlyA02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Aminomethyltransferase beta-barrel domains 0.9538 42 125 3.30.70.1400
3girA02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Aminomethyltransferase beta-barrel domains 0.9456 43 123 3.30.70.1400
af_G5EE11_2_112_3.30.70.1400 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Aminomethyltransferase beta-barrel domains 0.9344 35 125 3.30.70.1400
1wosA02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Aminomethyltransferase beta-barrel domains 0.9335 41 124 3.30.70.1400
1wsvB02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Aminomethyltransferase beta-barrel domains 0.914 43 123 3.30.70.1400
ID Description Score Start End GO Terms
AF-A0A2N2S560-F1-model_v4 Folate-binding protein 0.9816 38 114 GO:0016226
AF-A0A1F4DS49-F1-model_v4 Aminomethyltransferase folate-binding domain-containing protein 0.9668 32 340 GO:0016226
AF-A0A426QED8-F1-model_v4 Folate-binding protein 0.9581 52 344 GO:0016226
AF-A0A847HZ31-F1-model_v4 Aminomethyltransferase folate-binding domain-containing protein 0.9572 33 138 GO:0016226
AF-A0A1F4DS49-F1-model_v4 Aminomethyltransferase folate-binding domain-containing protein 0.9545 32 340 GO:0016226

Map