F379390

General Info

Members Datasets Scaffolds Average Seq Length
273 169 546 338

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2870628048|2870629335
Length 373
Sequence SCPVTVLPILQPGPGSTSRPGNGEERMNSLTDLLDVVIGVDTHVLTHTAAIVDAGTGGVIAQLTVDATATGYAELVDFADEHSTLRAWAIEGTGGHGAGLARHLERSSEVVVELDRPERAQRRHGAKSDPLDAIRAAREALSRPRLGTPRSPGDRQALSVLLAARRSAVASSTDAQRQVFSLVIAAPEPIRVKFRGMKLPAMLRTAAKLRLSPSWDLETRTTVTVLRSLARRALELTAEAAAHEKEILRIVRTMRPDLLDQPGIGPIVAATVLCAWSHPGRIHSEAAFAMLGGVAPIPATSGQVTHRHRLNRHGDRQLNRALHVIALSRLRYDERTRAYADRRTSQGRSRREIIRCLKRYIARDLYRLLEHPA

Samples

Sample ID Description Type Environment
1 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
4 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
5 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
8 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
13 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
17 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
18 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
19 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
20 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
21 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
22 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
23 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
24 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
25 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
26 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
27 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
28 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
29 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
30 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
31 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
32 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
33 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
34 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
35 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
36 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
37 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
38 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
60 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
61 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
62 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
63 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
64 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
65 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
66 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
67 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
68 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
69 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
70 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
71 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
72 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
73 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
74 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
75 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
76 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
77 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
78 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
79 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
80 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
81 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
82 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
83 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
84 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
85 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
86 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
87 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
88 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
89 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
90 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
91 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
92 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
93 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
94 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
95 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
96 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
97 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
98 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
99 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
100 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
101 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
102 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
103 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
104 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
105 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
106 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
107 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
108 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
109 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
110 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
111 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
112 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
113 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
114 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
115 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
116 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
117 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
118 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
119 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
120 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
121 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
122 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
123 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
139 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
140 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
141 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
142 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
143 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
144 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
145 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
146 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
147 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
148 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
149 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
150 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
151 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
152 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
153 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
156 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
157 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
158 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
159 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
160 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
161 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
162 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
163 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
164 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
165 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
166 2870628048 Microbacterium thalassium DSM 12511 Isolate Rhizosphere
167 2643221604 Nocardioides sp. Root190 Isolate Unclassified
168 2643221641 Nocardioides sp. Root122 Isolate Unclassified
169 2738541272 Promicromonospora sp. AC04 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.8
Metatranscriptomes 0
Isolates 2.2

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.59
Nodule 0
Rhizoplane 6.59
Rhizosphere 84.25
Stem 0
Stem Tuber 0
Unclassified 1.1

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24741J21665_1015283 3300001915 Bacteria 1269
2 JGI24740J21852_10014120 3300001979 Bacteria 2957
3 JGI24735J21928_10036777 3300002067 Bacteria 1436
4 rootH1_10051502 3300003316 Bacteria 1219
5 JGI25407J50210_10026538 3300003373 Bacteria 1503
6 Ga0070658_10027909 3300005327 Bacteria 4530
7 Ga0070659_100157297 3300005366 Bacteria 1857
8 Ga0070659_100187555 3300005366 Bacteria 1699
9 Ga0070709_10101377 3300005434 Bacteria 1918
10 Ga0070709_10118788 3300005434 Bacteria 1788
11 Ga0070713_100268874 3300005436 Bacteria 1560
12 Ga0070710_10003710 3300005437 Bacteria 7223
13 Ga0070710_10139062 3300005437 Bacteria 1487
14 Ga0070711_100012703 3300005439 Bacteria 5269
15 Ga0070663_100267174 3300005455 Bacteria 1359
16 Ga0070678_100334174 3300005456 Bacteria 1298
17 Ga0070681_10212076 3300005458 Bacteria 1852
18 Ga0070679_100315702 3300005530 Bacteria 1512
19 Ga0070684_100402214 3300005535 Bacteria 1262
20 Ga0068852_100430770 3300005616 Bacteria 1302
21 Ga0068851_10091981 3300005834 Bacteria 1598
22 Ga0081538_10000892 3300005981 Bacteria 32289
23 Ga0081538_10010435 3300005981 Bacteria 7616
24 Ga0081538_10013257 3300005981 Bacteria 6539
25 Ga0081538_10052961 3300005981 Bacteria 2419
26 Ga0081538_10053889 3300005981 Bacteria 2386
27 Ga0070717_10068433 3300006028 Bacteria 2955
28 Ga0075365_10009273 3300006038 Bacteria 5646
29 Ga0075365_10050467 3300006038 Bacteria 2744
30 Ga0075365_10059678 3300006038 Bacteria 2543
31 Ga0075365_10166971 3300006038 Bacteria 1535
32 Ga0075365_10199277 3300006038 Bacteria 1402
33 Ga0075368_10014410 3300006042 Bacteria 2920
34 Ga0075363_100071292 3300006048 Bacteria 1888
35 Ga0075364_10135394 3300006051 Bacteria 1655
36 Ga0070715_10051374 3300006163 Bacteria 1774
37 Ga0070712_100201305 3300006175 Bacteria 1564
38 Ga0075370_10048434 3300006353 Bacteria 2408
39 Ga0105245_10442010 3300009098 Bacteria 1307
40 Ga0105243_10405194 3300009148 Bacteria 1268
41 Ga0105242_10158026 3300009176 Bacteria 1982
42 Ga0105249_10416305 3300009553 Bacteria 1377
43 Ga0157372_10350548 3300013307 Bacteria 1720
44 Ga0157375_10167404 3300013308 Bacteria 2343
45 Ga0163163_10214139 3300014325 Bacteria 1975
46 Ga0157380_10331512 3300014326 Bacteria 1415
47 Ga0157376_10313366 3300014969 Bacteria 1489
48 Ga0163161_10265308 3300017792 Bacteria 1342
49 Ga0207682_10080819 3300025893 Bacteria 1393
50 Ga0207692_10072460 3300025898 Bacteria 1820
51 Ga0207692_10140116 3300025898 Bacteria 1375
52 Ga0207688_10066060 3300025901 Bacteria 2045
53 Ga0207647_10004906 3300025904 Bacteria 9871
54 Ga0207699_10105949 3300025906 Bacteria 1794
55 Ga0207705_10209587 3300025909 Bacteria 1478
56 Ga0207707_10170817 3300025912 Bacteria 1900
57 Ga0207693_10224282 3300025915 Bacteria 1476
58 Ga0207663_10006903 3300025916 Bacteria 5851
59 Ga0207660_10249432 3300025917 Bacteria 1401
60 Ga0207652_10314219 3300025921 Bacteria 1414
61 Ga0207687_10130712 3300025927 Bacteria 1892
62 Ga0207700_10097180 3300025928 Bacteria 2340
63 Ga0207664_10272789 3300025929 Bacteria 1482
64 Ga0207690_10118664 3300025932 Bacteria 1918
65 Ga0207690_10178967 3300025932 Bacteria 1595
66 Ga0207709_10296930 3300025935 Bacteria 1200
67 Ga0207709_10298522 3300025935 Bacteria 1197
68 Ga0207665_10011856 3300025939 Bacteria 5724
69 Ga0207661_10388802 3300025944 Bacteria 1263
70 Ga0207712_10094014 3300025961 Bacteria 2213
71 Ga0207675_100269423 3300026118 Bacteria 1652
72 Ga0207683_10619402 3300026121 Bacteria 1002
73 Ga0265336_10016739 3300028666 Bacteria 2396
74 Ga0316181_1126807 3300030744 Bacteria 1912
75 Ga0316182_1339849 3300030745 Bacteria 1739
76 Ga0307514_10167650 3300031649 Bacteria 1441
77 Ga0316575_10016847 3300031665 Bacteria 2769
78 Ga0316576_10046098 3300031727 Bacteria 3154
79 Ga0316578_10121770 3300031728 Bacteria 1568
80 Ga0307405_10004497 3300031731 Bacteria 6598
81 Ga0316577_10132538 3300031733 Bacteria 1402
82 Ga0307406_10218821 3300031901 Bacteria 1414
83 Ga0307409_100396666 3300031995 Bacteria 1316
84 Ga0307416_100243629 3300032002 Bacteria 1744
85 Ga0307416_100413453 3300032002 Bacteria 1390
86 Ga0307416_100427020 3300032002 Bacteria 1371
87 Ga0307416_100481646 3300032002 Bacteria 1301
88 Ga0307414_10057800 3300032004 Bacteria 2729
89 Ga0307411_10243267 3300032005 Bacteria 1410
90 Ga0307415_100036923 3300032126 Bacteria 3207
91 Ga0307415_100184637 3300032126 Bacteria 1640
92 Ga0307415_100224608 3300032126 Bacteria 1508
93 Ga0316583_10008511 3300032133 Bacteria 3699
94 Ga0316585_10024270 3300032137 Bacteria 1875
95 Ga0373946_0073359 3300035171 Bacteria 1483
96 Ga0316574_0006228 3300035398 Bacteria 6428
97 Ga0316574_0108807 3300035398 Bacteria 1776
98 Ga0373935_0184125 3300035692 Bacteria 1435
99 Ga0373947_0124149 3300035725 Bacteria 1642
100 Ga0316582_0004353 3300036647 Bacteria 7133
101 Ga0316584_0216271 3300036712 Bacteria 1409
102 Ga0373925_0190912 3300037068 Unclassified 1625
103 Ga0395899_0105373 3300037312 Bacteria 2031
104 Ga0395900_0300210 3300037418 Bacteria 1592
105 Ga0395900_0382303 3300037418 Bacteria 1375
106 Ga0395898_0059421 3300037466 Bacteria 3719
107 Ga0395898_0167293 3300037466 Bacteria 2102
108 Ga0395898_0288203 3300037466 Bacteria 1566
109 Ga0395905_0093047 3300037471 Bacteria 2827
110 Ga0395905_0120786 3300037471 Bacteria 2463
111 Ga0395905_0169866 3300037471 Bacteria 2048
112 Ga0395901_0077365 3300038443 Bacteria 3472
113 Ga0395901_0248839 3300038443 Bacteria 1852
114 Ga0395901_0304506 3300038443 Bacteria 1652
115 Ga0395901_0338974 3300038443 Bacteria 1553
116 Ga0395901_0470569 3300038443 Unclassified 1283
117 Ga0439438_021976 3300041405 Bacteria 1774
118 Ga0439465_0036561 3300041413 Bacteria 1577
119 Ga0451853_1627689 3300041512 Bacteria 1641
120 Ga0439442_017517 3300042002 Bacteria 1479
121 Ga0439442_024638 3300042002 Bacteria 1252
122 Ga0439455_0032971 3300042012 Bacteria 1297
123 Ga0439457_021998 3300042014 Bacteria 1412
124 Ga0450906_024977 3300042145 Bacteria 1062
125 Ga0439434_0038956 3300042435 Bacteria 1457
126 Ga0439464_0023963 3300042439 Bacteria 1687
127 Ga0439464_0037957 3300042439 Bacteria 1368
128 Ga0466961_0152861 3300044693 Bacteria 1440
129 Ga0466963_0140121 3300044694 Bacteria 1675
130 Ga0466963_0181732 3300044694 Bacteria 1468
131 Ga0466970_0148364 3300044765 Bacteria 1294
132 Ga0466957_0071393 3300044842 Bacteria 2147
133 Ga0466960_0055123 3300044901 Bacteria 1932
134 Ga0466960_0097519 3300044901 Bacteria 1508
135 Ga0466960_0103792 3300044901 Bacteria 1468
136 Ga0466958_0106677 3300045836 Bacteria 1747
137 Ga0495629_0105754 3300046459 Bacteria 1963
138 Ga0495641_0094491 3300046461 Bacteria 1335
139 Ga0495582_0052840 3300046473 Bacteria 2240
140 Ga0495594_0171383 3300046499 Bacteria 1235
141 Ga0495666_0073990 3300046526 Bacteria 1616
142 Ga0495635_0179874 3300046663 Bacteria 1438
143 Ga0495647_0056698 3300046681 Bacteria 1536
144 Ga0495624_0151903 3300046690 Bacteria 1416
145 Ga0495581_0040915 3300047315 Bacteria 2681
146 Ga0495676_0082189 3300047321 Bacteria 2438
147 Ga0495614_0046859 3300048089 Unclassified 1853
148 Ga0496101_0259623 3300048904 Bacteria 1355
149 Ga0496102_0008486 3300048905 Bacteria 8806
150 Ga0496104_0284445 3300048907 Bacteria 1566
151 Ga0496104_0305520 3300048907 Bacteria 1503
152 Ga0496105_0255564 3300048908 Bacteria 1418
153 Ga0496105_0315501 3300048908 Bacteria 1254
154 Ga0496108_0393531 3300048911 Bacteria 1210
155 Ga0496109_0373214 3300048912 Bacteria 1347
156 Ga0496109_0396161 3300048912 Bacteria 1304
157 Ga0496111_0039422 3300048914 Bacteria 3386
158 Ga0496111_0132954 3300048914 Bacteria 1842
159 Ga0496111_0239693 3300048914 Bacteria 1347
160 Ga0496114_0194485 3300048917 Bacteria 1775
161 Ga0496114_0253545 3300048917 Bacteria 1548
162 Ga0496114_0256745 3300048917 Bacteria 1538
163 Ga0496114_0278806 3300048917 Bacteria 1473
164 Ga0496114_0398053 3300048917 Bacteria 1219
165 Ga0496115_0246625 3300048918 Bacteria 1471
166 Ga0501031_0001788 3300049568 Bacteria 13497
167 Ga0501031_0163158 3300049568 Bacteria 1456
168 Ga0501031_0245539 3300049568 Bacteria 1164
169 Ga0501032_0092212 3300049569 Bacteria 2009
170 Ga0501032_0176259 3300049569 Bacteria 1400
171 Ga0501033_0032536 3300049570 Bacteria 3916
172 Ga0501033_0056932 3300049570 Bacteria 2889
173 Ga0501034_0207827 3300049571 Bacteria 1913
174 Ga0501034_0323678 3300049571 Bacteria 1474
175 Ga0501036_0000707 3300049572 Bacteria 24649
176 Ga0501036_0250444 3300049572 Bacteria 1484
177 Ga0501036_0296893 3300049572 Bacteria 1351
178 Ga0501037_0097132 3300049573 Bacteria 2128
179 Ga0501037_0178484 3300049573 Bacteria 1507
180 Ga0501038_0002545 3300049574 Bacteria 16995
181 Ga0501038_0207244 3300049574 Bacteria 1570
182 Ga0501038_0344120 3300049574 Bacteria 1162
183 Ga0501039_0005086 3300049575 Bacteria 9962
184 Ga0501039_0039503 3300049575 Bacteria 3645
185 Ga0501039_0182924 3300049575 Bacteria 1648
186 Ga0501039_0214767 3300049575 Bacteria 1512
187 Ga0501040_0004089 3300049576 Bacteria 9484
188 Ga0501040_0055641 3300049576 Bacteria 2713
189 Ga0501041_0000245 3300049577 Bacteria 25342
190 Ga0501041_0118915 3300049577 Bacteria 1641
191 Ga0501041_0219147 3300049577 Bacteria 1194
192 Ga0501042_0003290 3300049578 Bacteria 10109
193 Ga0501042_0060451 3300049578 Bacteria 2706
194 Ga0501042_0170838 3300049578 Bacteria 1568
195 Ga0501043_0020855 3300049579 Bacteria 5140
196 Ga0501043_0124274 3300049579 Bacteria 2023
197 Ga0501043_0158146 3300049579 Bacteria 1771
198 Ga0501046_0001635 3300049580 Bacteria 21456
199 Ga0501046_0005627 3300049580 Bacteria 11184
200 Ga0501046_0083552 3300049580 Bacteria 2464
201 Ga0501047_0005594 3300049581 Bacteria 11834
202 Ga0501047_0285465 3300049581 Bacteria 1494
203 Ga0501048_0000703 3300049582 Bacteria 24386
204 Ga0501048_0005540 3300049582 Bacteria 9602
205 Ga0501048_0162757 3300049582 Bacteria 1579
206 Ga0501048_0212481 3300049582 Bacteria 1372
207 Ga0501048_0218324 3300049582 Bacteria 1352
208 Ga0501067_0011377 3300049583 Bacteria 4928
209 Ga0501067_0109354 3300049583 Bacteria 1537
210 Ga0501068_0042791 3300049584 Bacteria 2723
211 Ga0501068_0057111 3300049584 Bacteria 2366
212 Ga0501069_0058895 3300049585 Bacteria 2143
213 Ga0501069_0095191 3300049585 Bacteria 1686
214 Ga0501069_0148453 3300049585 Bacteria 1346
215 Ga0501070_0079464 3300049586 Bacteria 2714
216 Ga0501070_0116682 3300049586 Bacteria 2205
217 Ga0501070_0150487 3300049586 Bacteria 1920
218 Ga0501070_0169216 3300049586 Bacteria 1800
219 Ga0501070_0184609 3300049586 Bacteria 1715
220 Ga0501071_0000270 3300049587 Bacteria 24478
221 Ga0501071_0271555 3300049587 Bacteria 1282
222 Ga0501072_0003770 3300049588 Bacteria 11449
223 Ga0501072_0056364 3300049588 Bacteria 3097
224 Ga0501072_0234320 3300049588 Bacteria 1462
225 Ga0501073_0023224 3300049589 Bacteria 4456
226 Ga0501073_0108905 3300049589 Bacteria 1922
227 Ga0501074_0026680 3300049590 Bacteria 4188
228 Ga0501074_0032554 3300049590 Bacteria 3777
229 Ga0501074_0121049 3300049590 Bacteria 1872
230 Ga0501075_0000549 3300049591 Bacteria 22780
231 Ga0501076_0000087 3300049592 Bacteria 48819
232 Ga0501076_0317674 3300049592 Bacteria 1277
233 Ga0501077_0003423 3300049593 Bacteria 9540
234 Ga0501077_0139595 3300049593 Bacteria 1537
235 Ga0501079_0001424 3300049741 Bacteria 16891
236 Ga0501080_0011185 3300049742 Bacteria 8213
237 Ga0501080_0037253 3300049742 Bacteria 4541
238 Ga0501080_0411531 3300049742 Bacteria 1216
239 Ga0501081_0003482 3300049743 Bacteria 10057
240 Ga0501081_0142209 3300049743 Bacteria 1720
241 Ga0501083_0010126 3300049744 Bacteria 6644
242 Ga0501035_0019609 3300049822 Bacteria 6214
243 Ga0501035_0025891 3300049822 Bacteria 5375
244 Ga0501035_0213893 3300049822 Bacteria 1648
245 Ga0501044_0083526 3300049823 Bacteria 3229
246 Ga0501044_0134204 3300049823 Bacteria 2467
247 Ga0501044_0171632 3300049823 Bacteria 2140
248 Ga0501045_0000605 3300049824 Bacteria 22640
249 Ga0501045_0137719 3300049824 Bacteria 1815
250 Ga0501045_0233697 3300049824 Bacteria 1369
251 nmdc:mga03n38_64087_c1 3300050490 Bacteria 1681
252 nmdc:mga00v17_141765_c1 3300050491 Bacteria 1541
253 nmdc:mga00v17_155181_c1 3300050491 Bacteria 1472
254 nmdc:mga0yw44_109339_c2 3300050492 Bacteria 1327
255 nmdc:mga0yw44_110859_c1 3300050492 Bacteria 1758
256 nmdc:mga0yw44_132932_c1 3300050492 Bacteria 1612
257 nmdc:mga06z11_110226_c1 3300050494 Bacteria 1523
258 nmdc:mga07m45_61159_c1 3300050496 Bacteria 2133
259 Ga0495655_0035616 3300053083 Bacteria 1240
260 Ga0500593_001072 3300053117 Bacteria 9891
261 Ga0501084_0000831 3300054114 Bacteria 23793
262 Ga0501084_0181350 3300054114 Bacteria 1778
263 Ga0501084_0272886 3300054114 Bacteria 1428
264 Ga0501082_0002444 3300060353 Bacteria 16303
265 Ga0501082_0145026 3300060353 Bacteria 2061
266 Ga0530510_0000659 3300061734 Bacteria 22313
267 Ga0530510_0078831 3300061734 Bacteria 2396
268 2870629335 2870628048 Bacteria 3696012
269 2644033008 2643221604 Bacteria 5014917
270 2644229056 2643221641 Bacteria 4490190
271 2644231103 2643221641 Bacteria 4490190
272 2738695846 2738541272 Bacteria 6848551
273 2870628425 2870628048 Bacteria 3696012
274 JGI24741J21665_1015283
275 JGI24740J21852_10014120
276 JGI24735J21928_10036777
277 rootH1_10051502
278 JGI25407J50210_10026538
279 Ga0070658_10027909
280 Ga0070659_100157297
281 Ga0070659_100187555
282 Ga0070709_10101377
283 Ga0070709_10118788
284 Ga0070713_100268874
285 Ga0070710_10003710
286 Ga0070710_10139062
287 Ga0070711_100012703
288 Ga0070663_100267174
289 Ga0070678_100334174
290 Ga0070681_10212076
291 Ga0070679_100315702
292 Ga0070684_100402214
293 Ga0068852_100430770
294 Ga0068851_10091981
295 Ga0081538_10000892
296 Ga0081538_10010435
297 Ga0081538_10013257
298 Ga0081538_10052961
299 Ga0081538_10053889
300 Ga0070717_10068433
301 Ga0075365_10009273
302 Ga0075365_10050467
303 Ga0075365_10059678
304 Ga0075365_10166971
305 Ga0075365_10199277
306 Ga0075368_10014410
307 Ga0075363_100071292
308 Ga0075364_10135394
309 Ga0070715_10051374
310 Ga0070712_100201305
311 Ga0075370_10048434
312 Ga0105245_10442010
313 Ga0105243_10405194
314 Ga0105242_10158026
315 Ga0105249_10416305
316 Ga0157372_10350548
317 Ga0157375_10167404
318 Ga0163163_10214139
319 Ga0157380_10331512
320 Ga0157376_10313366
321 Ga0163161_10265308
322 Ga0207682_10080819
323 Ga0207692_10072460
324 Ga0207692_10140116
325 Ga0207688_10066060
326 Ga0207647_10004906
327 Ga0207699_10105949
328 Ga0207705_10209587
329 Ga0207707_10170817
330 Ga0207693_10224282
331 Ga0207663_10006903
332 Ga0207660_10249432
333 Ga0207652_10314219
334 Ga0207687_10130712
335 Ga0207700_10097180
336 Ga0207664_10272789
337 Ga0207690_10118664
338 Ga0207690_10178967
339 Ga0207709_10296930
340 Ga0207709_10298522
341 Ga0207665_10011856
342 Ga0207661_10388802
343 Ga0207712_10094014
344 Ga0207675_100269423
345 Ga0207683_10619402
346 Ga0265336_10016739
347 Ga0316181_1126807
348 Ga0316182_1339849
349 Ga0307514_10167650
350 Ga0316575_10016847
351 Ga0316576_10046098
352 Ga0316578_10121770
353 Ga0307405_10004497
354 Ga0316577_10132538
355 Ga0307406_10218821
356 Ga0307409_100396666
357 Ga0307416_100243629
358 Ga0307416_100413453
359 Ga0307416_100427020
360 Ga0307416_100481646
361 Ga0307414_10057800
362 Ga0307411_10243267
363 Ga0307415_100036923
364 Ga0307415_100184637
365 Ga0307415_100224608
366 Ga0316583_10008511
367 Ga0316585_10024270
368 Ga0373946_0073359
369 Ga0316574_0006228
370 Ga0316574_0108807
371 Ga0373935_0184125
372 Ga0373947_0124149
373 Ga0316582_0004353
374 Ga0316584_0216271
375 Ga0373925_0190912
376 Ga0395899_0105373
377 Ga0395900_0300210
378 Ga0395900_0382303
379 Ga0395898_0059421
380 Ga0395898_0167293
381 Ga0395898_0288203
382 Ga0395905_0093047
383 Ga0395905_0120786
384 Ga0395905_0169866
385 Ga0395901_0077365
386 Ga0395901_0248839
387 Ga0395901_0304506
388 Ga0395901_0338974
389 Ga0395901_0470569
390 Ga0439438_021976
391 Ga0439465_0036561
392 Ga0451853_1627689
393 Ga0439442_017517
394 Ga0439442_024638
395 Ga0439455_0032971
396 Ga0439457_021998
397 Ga0450906_024977
398 Ga0439434_0038956
399 Ga0439464_0023963
400 Ga0439464_0037957
401 Ga0466961_0152861
402 Ga0466963_0140121
403 Ga0466963_0181732
404 Ga0466970_0148364
405 Ga0466957_0071393
406 Ga0466960_0055123
407 Ga0466960_0097519
408 Ga0466960_0103792
409 Ga0466958_0106677
410 Ga0495629_0105754
411 Ga0495641_0094491
412 Ga0495582_0052840
413 Ga0495594_0171383
414 Ga0495666_0073990
415 Ga0495635_0179874
416 Ga0495647_0056698
417 Ga0495624_0151903
418 Ga0495581_0040915
419 Ga0495676_0082189
420 Ga0495614_0046859
421 Ga0496101_0259623
422 Ga0496102_0008486
423 Ga0496104_0284445
424 Ga0496104_0305520
425 Ga0496105_0255564
426 Ga0496105_0315501
427 Ga0496108_0393531
428 Ga0496109_0373214
429 Ga0496109_0396161
430 Ga0496111_0039422
431 Ga0496111_0132954
432 Ga0496111_0239693
433 Ga0496114_0194485
434 Ga0496114_0253545
435 Ga0496114_0256745
436 Ga0496114_0278806
437 Ga0496114_0398053
438 Ga0496115_0246625
439 Ga0501031_0001788
440 Ga0501031_0163158
441 Ga0501031_0245539
442 Ga0501032_0092212
443 Ga0501032_0176259
444 Ga0501033_0032536
445 Ga0501033_0056932
446 Ga0501034_0207827
447 Ga0501034_0323678
448 Ga0501036_0000707
449 Ga0501036_0250444
450 Ga0501036_0296893
451 Ga0501037_0097132
452 Ga0501037_0178484
453 Ga0501038_0002545
454 Ga0501038_0207244
455 Ga0501038_0344120
456 Ga0501039_0005086
457 Ga0501039_0039503
458 Ga0501039_0182924
459 Ga0501039_0214767
460 Ga0501040_0004089
461 Ga0501040_0055641
462 Ga0501041_0000245
463 Ga0501041_0118915
464 Ga0501041_0219147
465 Ga0501042_0003290
466 Ga0501042_0060451
467 Ga0501042_0170838
468 Ga0501043_0020855
469 Ga0501043_0124274
470 Ga0501043_0158146
471 Ga0501046_0001635
472 Ga0501046_0005627
473 Ga0501046_0083552
474 Ga0501047_0005594
475 Ga0501047_0285465
476 Ga0501048_0000703
477 Ga0501048_0005540
478 Ga0501048_0162757
479 Ga0501048_0212481
480 Ga0501048_0218324
481 Ga0501067_0011377
482 Ga0501067_0109354
483 Ga0501068_0042791
484 Ga0501068_0057111
485 Ga0501069_0058895
486 Ga0501069_0095191
487 Ga0501069_0148453
488 Ga0501070_0079464
489 Ga0501070_0116682
490 Ga0501070_0150487
491 Ga0501070_0169216
492 Ga0501070_0184609
493 Ga0501071_0000270
494 Ga0501071_0271555
495 Ga0501072_0003770
496 Ga0501072_0056364
497 Ga0501072_0234320
498 Ga0501073_0023224
499 Ga0501073_0108905
500 Ga0501074_0026680
501 Ga0501074_0032554
502 Ga0501074_0121049
503 Ga0501075_0000549
504 Ga0501076_0000087
505 Ga0501076_0317674
506 Ga0501077_0003423
507 Ga0501077_0139595
508 Ga0501079_0001424
509 Ga0501080_0011185
510 Ga0501080_0037253
511 Ga0501080_0411531
512 Ga0501081_0003482
513 Ga0501081_0142209
514 Ga0501083_0010126
515 Ga0501035_0019609
516 Ga0501035_0025891
517 Ga0501035_0213893
518 Ga0501044_0083526
519 Ga0501044_0134204
520 Ga0501044_0171632
521 Ga0501045_0000605
522 Ga0501045_0137719
523 Ga0501045_0233697
524 nmdc:mga03n38_64087_c1
525 nmdc:mga00v17_141765_c1
526 nmdc:mga00v17_155181_c1
527 nmdc:mga0yw44_109339_c2
528 nmdc:mga0yw44_110859_c1
529 nmdc:mga0yw44_132932_c1
530 nmdc:mga06z11_110226_c1
531 nmdc:mga07m45_61159_c1
532 Ga0495655_0035616
533 Ga0500593_001072
534 Ga0501084_0000831
535 Ga0501084_0181350
536 Ga0501084_0272886
537 Ga0501082_0002444
538 Ga0501082_0145026
539 Ga0530510_0000659
540 Ga0530510_0078831
541 2870629335
542 2644033008
543 2644229056
544 2644231103
545 2738695846
546 2870628425

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02371

Transposase_20

Transposase IS116/IS110/IS902 family

256

341

0.96

PF01548

DEDD_Tnp_IS110

Transposase

38

184

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
7fjb-assembly1.cif.gz_A kpacka (pduw) with amppnp, sodium acetate complex structure 0.8571 10 40
3slc-assembly2.cif.gz_C crystal structure of apo form of acetate kinase (acka) from salmonella typhimurium 0.8114 9 38
3hrg-assembly1.cif.gz_A crystal structure of bacteroides thetaiotaomicron bt_3980, protein with actin-like atpase fold and unknown function (np_812891.1) from bacteroides thetaiotaomicron vpi-5482 at 1.85 a resolution 0.7765 9 87
3qdk-assembly2.cif.gz_D structural insight on mechanism and diverse substrate selection strategy of ribulokinase 0.7752 10 40
5m1q-assembly1.cif.gz_A crystal structure of the large terminase nuclease from thermophilic phage g20c with bound zinc 0.7622 10 88
ID Description Score Start End Superfamily
2iirA01 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.8944 10 40 3.30.420.40
af_Q54TC4_302_594_3.60.21.10 Alpha Beta;4-Layer Sandwich;Purple Acid Phosphatase; chain A, domain 2;Metallo-dependent phosphatases 0.8403 12 40 3.60.21.10
3slcC01 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.8114 9 38 3.30.420.40
af_A0A2R8QV90_961_1207_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.7969 9 39 2.130.10.10
af_P96234_14_162_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.7915 13 155 3.30.420.10
ID Description Score Start End GO Terms
AF-A0A2U2YY81-F1-model_v4 IS110 family transposase 0.977 10 88 GO:0003677
GO:0004803
GO:0006313
AF-A0A1H3QGW1-F1-model_v4 Transposase IS116/IS110/IS902 family protein 0.9442 133 342 GO:0003677
GO:0004803
GO:0006313
AF-A0A4R7WCT9-F1-model_v4 deleted 0.9402 127 344
AF-A0A0J6YG50-F1-model_v4 Transposase IS116/IS110/IS902 family protein 0.9378 3 343 GO:0003677
GO:0004803
GO:0006313
AF-A0A7W0M4F9-F1-model_v4 IS110 family transposase 0.9373 64 255

Map