F378921

General Info

Members Datasets Scaffolds Average Seq Length
273 203 546 261

Family's Representative Sequence

Representative Sequence 3300005563|Ga0068855_100000006|Ga0068855_100000006257
Length 293
Sequence MTTWRDRHTSRKAISMNWPRDLLLGTSMKGVTMSQRLLNKVAVITGAASGIGREIALAFAKEGARVVIADLDADAALSTAAEIDPAFEHALPIAMDVSDEAQVERGMAQVIETFGQVDILVSNAGVQIVAPLVDFEFEKWKKLLAIHLDGAFLTTRAALRQMYRQQGGSIIYIGSVHSKEASPLKAPYVAAKHGLIGLAKVVAKEGAPHGVRANVICPGFVRTALVEKQIPEQARALGISEAEVVRNVMLKETVDGEFTTVEDVAEAAVFLAAFPSNALTGQSLVVSHGWYMQ

Samples

Sample ID Description Type Environment
1 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
2 3300000043 Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 young rhizosphere Metagenome Rhizosphere
3 3300000044 Arabidopsis rhizosphere microbial communities from the University of North Carolina, USA - sample from Arabidopsis soil old Metagenome Rhizosphere
4 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
16 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
17 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
18 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
19 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
20 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
21 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
26 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
27 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
28 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
29 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
30 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
31 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
32 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
33 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
34 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
35 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
36 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
37 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
38 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
39 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
40 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
41 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
42 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
43 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
44 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
45 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
46 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
47 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
48 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
49 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
50 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
51 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
53 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
55 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
56 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
57 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
58 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
59 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
60 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
61 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
62 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
63 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
64 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
65 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
66 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
67 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
68 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
69 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
70 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
71 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
72 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
73 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
74 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
75 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
76 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
77 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
78 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
79 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300027360 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 PM (SPAdes) (version 2) Metagenome Rhizosphere
107 3300027364 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co AM (SPAdes) (version 2) Metagenome Rhizosphere
108 3300027395 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 PM (SPAdes) (version 2) Metagenome Rhizosphere
109 3300027462 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes) (version 2) Metagenome Rhizosphere
110 3300027471 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
114 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
115 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
116 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
117 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
118 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
119 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
120 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
121 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
122 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
123 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
124 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
125 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
126 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
127 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
128 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
129 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
130 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
131 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
132 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
133 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
134 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
135 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
136 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
137 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
138 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
139 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
140 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
141 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
142 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
143 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
144 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
145 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
146 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
147 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
148 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
149 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
150 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
151 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
152 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
153 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
154 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
155 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
156 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
157 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
158 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
159 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
160 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
161 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
162 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
163 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
164 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
165 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
166 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
167 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
168 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
169 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
170 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
171 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
172 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
173 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
174 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
175 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
176 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
177 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
178 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
179 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
180 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
181 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
182 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
183 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
184 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
185 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
186 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
187 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
188 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
189 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
190 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
191 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
192 3300059624 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 146R_CW_T3_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
193 2508501114 Microvirga lotononidis WSM3557 Isolate Nodule
194 2600255292 Janthinobacterium lividum NFR18 Isolate Rhizoplane
195 2617270735 Bradyrhizobium shewense ERR11 Isolate Nodule
196 2721755755 Bradyrhizobium icense LMTR 13 Isolate Nodule
197 2765235838 Herbaspirillum robiniae AA6 Isolate Unclassified
198 2775506901 Microvirga ossetica V5/3m Isolate Unclassified
199 2839094727 Herbaspirillum robiniae HZ10 Isolate Nodule
200 2857547612 Janthinobacterium sp. R-74502 Isolate Unclassified
201 2885080285 Janthinobacterium sp. AD80 Isolate Rhizosphere
202 2932410948 Janthinobacterium lividum 2829 Isolate Rhizosphere
203 2932416698 Janthinobacterium lividum 2830 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.6
Metatranscriptomes 0.37
Isolates 4.03

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.3
Nodule 1.83
Rhizoplane 5.49
Rhizosphere 83.88
Stem 0
Stem Tuber 0
Unclassified 0.73

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068855_100000006 3300005563 Bacteria 298092
2 ARcpr5yngRDRAFT_c004091 3300000043 Bacteria 1394
3 ARSoilOldRDRAFT_c001726 3300000044 Bacteria 2004
4 Ga0065714_10190310 3300005288 Bacteria 930
5 Ga0070658_10034787 3300005327 Bacteria 4054
6 Ga0070658_10056016 3300005327 Bacteria 3203
7 Ga0070666_10001366 3300005335 Bacteria 14823
8 Ga0070680_100256909 3300005336 Bacteria 1478
9 Ga0070682_100402080 3300005337 Bacteria 1036
10 Ga0068868_100000635 3300005338 Bacteria 23648
11 Ga0070660_100002748 3300005339 Bacteria 12094
12 Ga0070691_10002284 3300005341 Bacteria 8489
13 Ga0070691_10020716 3300005341 Bacteria 3039
14 Ga0070668_100015477 3300005347 Bacteria 5702
15 Ga0070668_100281493 3300005347 Bacteria 1389
16 Ga0070668_100679806 3300005347 Bacteria 906
17 Ga0070671_100007160 3300005355 Bacteria 8918
18 Ga0070671_100188952 3300005355 Bacteria 1746
19 Ga0070671_100209030 3300005355 Bacteria 1655
20 Ga0070671_100430457 3300005355 Bacteria 1131
21 Ga0070673_100004693 3300005364 Bacteria 8674
22 Ga0070688_100174484 3300005365 Bacteria 1486
23 Ga0070667_100001121 3300005367 Bacteria 24448
24 Ga0070713_100291914 3300005436 Bacteria 1499
25 Ga0070710_10030622 3300005437 Bacteria 2897
26 Ga0070710_10299668 3300005437 Bacteria 1049
27 Ga0070700_100019810 3300005441 Bacteria 3888
28 Ga0070708_100000245 3300005445 Bacteria 40443
29 Ga0070708_100155500 3300005445 Unclassified 2129
30 Ga0070663_100270919 3300005455 Bacteria 1350
31 Ga0070662_100305717 3300005457 Bacteria 1293
32 Ga0070681_10101983 3300005458 Bacteria 2815
33 Ga0068867_100112631 3300005459 Bacteria 2092
34 Ga0070684_100252442 3300005535 Bacteria 1612
35 Ga0068853_100145356 3300005539 Bacteria 2131
36 Ga0070686_100037139 3300005544 Bacteria 3020
37 Ga0070695_100010948 3300005545 Bacteria 5421
38 Ga0070695_100076651 3300005545 Bacteria 2202
39 Ga0068855_100000899 3300005563 Bacteria 36852
40 Ga0068855_100022575 3300005563 Bacteria 7540
41 Ga0068857_100451434 3300005577 Bacteria 1202
42 Ga0068856_100003185 3300005614 Bacteria 16706
43 Ga0068852_100020557 3300005616 Bacteria 5251
44 Ga0068864_100079024 3300005618 Bacteria 2880
45 Ga0068866_10029962 3300005718 Bacteria 2607
46 Ga0068863_100192168 3300005841 Bacteria 1962
47 Ga0068863_100277158 3300005841 Bacteria 1624
48 Ga0068858_100000438 3300005842 Bacteria 43458
49 Ga0068858_100340600 3300005842 Bacteria 1435
50 Ga0068860_100116190 3300005843 Bacteria 2560
51 Ga0068860_100156379 3300005843 Bacteria 2197
52 Ga0068862_100007454 3300005844 Bacteria 9070
53 Ga0081540_1008920 3300005983 Bacteria 6948
54 Ga0070717_10281157 3300006028 Bacteria 1476
55 Ga0070712_100000374 3300006175 Bacteria 25351
56 Ga0075362_10015110 3300006177 Bacteria 3134
57 Ga0075369_10064827 3300006186 Bacteria 1600
58 Ga0075366_10030575 3300006195 Bacteria 3166
59 Ga0075370_10010954 3300006353 Bacteria 4755
60 Ga0075428_100030991 3300006844 Bacteria 5914
61 Ga0075434_100292617 3300006871 Bacteria 1648
62 Ga0075434_100426340 3300006871 Bacteria 1348
63 Ga0075434_100541382 3300006871 Bacteria 1184
64 Ga0075434_101070013 3300006871 Bacteria 820
65 Ga0068865_100371911 3300006881 Bacteria 1163
66 Ga0075436_100014089 3300006914 Bacteria 5473
67 Ga0075436_100133813 3300006914 Bacteria 1740
68 Ga0079104_1009366 3300006946 Bacteria 3324
69 Ga0105240_10009234 3300009093 Bacteria 13989
70 Ga0105240_10220819 3300009093 Bacteria 2208
71 Ga0105240_10354117 3300009093 Bacteria 1665
72 Ga0105240_10404960 3300009093 Bacteria 1536
73 Ga0111539_10721577 3300009094 Bacteria 1160
74 Ga0105245_10000584 3300009098 Bacteria 33110
75 Ga0105245_10245153 3300009098 Bacteria 1739
76 Ga0105245_10462074 3300009098 Bacteria 1280
77 Ga0114129_10047197 3300009147 Bacteria 6053
78 Ga0105241_10062680 3300009174 Bacteria 2867
79 Ga0105242_10386828 3300009176 Bacteria 1302
80 Ga0105248_10000119 3300009177 Bacteria 89987
81 Ga0105248_10754846 3300009177 Bacteria 1098
82 Ga0105237_10000915 3300009545 Bacteria 39667
83 Ga0105237_10460696 3300009545 Bacteria 1277
84 Ga0105238_10003841 3300009551 Bacteria 14925
85 Ga0105238_10027411 3300009551 Bacteria 5805
86 Ga0105249_10217769 3300009553 Bacteria 1877
87 Ga0105239_10027635 3300010375 Bacteria 6243
88 Ga0105239_10299464 3300010375 Bacteria 1811
89 Ga0105246_10068357 3300011119 Bacteria 2491
90 Ga0105246_10101240 3300011119 Bacteria 2098
91 Ga0157373_10001433 3300013100 Bacteria 18195
92 Ga0157369_10030815 3300013105 Bacteria 5913
93 Ga0157374_10000737 3300013296 Bacteria 28573
94 Ga0157378_10161432 3300013297 Bacteria 2096
95 Ga0157378_10378709 3300013297 Bacteria 1389
96 Ga0163162_10267427 3300013306 Bacteria 1841
97 Ga0157372_10007187 3300013307 Bacteria 11852
98 Ga0157375_10066468 3300013308 Bacteria 3600
99 Ga0157375_10138374 3300013308 Bacteria 2560
100 Ga0163163_10012078 3300014325 Bacteria 7857
101 Ga0182008_10001243 3300014497 Bacteria 17491
102 Ga0157379_10010447 3300014968 Bacteria 8092
103 Ga0157379_10171838 3300014968 Bacteria 1957
104 Ga0182006_1000097 3300015261 Bacteria 102186
105 Ga0182007_10000227 3300015262 Bacteria 37880
106 Ga0182005_1000038 3300015265 Bacteria 160030
107 Ga0163161_10050266 3300017792 Bacteria 3017
108 Ga0163161_10170150 3300017792 Bacteria 1665
109 Ga0163161_10255039 3300017792 Bacteria 1368
110 Ga0213872_10002934 3300021361 Bacteria 9683
111 Ga0213872_10011227 3300021361 Bacteria 4242
112 Ga0213872_10026923 3300021361 Bacteria 2641
113 Ga0213871_10036134 3300021441 Unclassified 1310
114 Ga0209026_1002428 3300025250 Bacteria 7007
115 Ga0207642_10117272 3300025899 Bacteria 1367
116 Ga0207680_10001167 3300025903 Bacteria 12391
117 Ga0207647_10000447 3300025904 Bacteria 33519
118 Ga0207695_10015602 3300025913 Bacteria 8935
119 Ga0207695_10125679 3300025913 Bacteria 2527
120 Ga0207671_10012577 3300025914 Bacteria 6797
121 Ga0207693_10000857 3300025915 Bacteria 27144
122 Ga0207663_10071539 3300025916 Bacteria 2238
123 Ga0207660_10346544 3300025917 Bacteria 1190
124 Ga0207657_10001992 3300025919 Bacteria 22069
125 Ga0207694_10000623 3300025924 Bacteria 32207
126 Ga0207694_10027047 3300025924 Bacteria 4367
127 Ga0207694_10190899 3300025924 Bacteria 1664
128 Ga0207687_10002258 3300025927 Bacteria 13132
129 Ga0207644_10009316 3300025931 Bacteria 6446
130 Ga0207644_10046731 3300025931 Bacteria 3086
131 Ga0207644_10101393 3300025931 Bacteria 2163
132 Ga0207644_10142321 3300025931 Bacteria 1848
133 Ga0207644_10201865 3300025931 Bacteria 1569
134 Ga0207706_10097110 3300025933 Bacteria 2591
135 Ga0207711_10000047 3300025941 Bacteria 150849
136 Ga0207711_10043770 3300025941 Bacteria 3820
137 Ga0207689_10268214 3300025942 Bacteria 1413
138 Ga0207667_10000053 3300025949 Bacteria 226712
139 Ga0207667_10000202 3300025949 Bacteria 86408
140 Ga0207667_10005173 3300025949 Bacteria 15937
141 Ga0207651_10019166 3300025960 Bacteria 4092
142 Ga0207712_10270712 3300025961 Bacteria 1381
143 Ga0207668_10009222 3300025972 Bacteria 5904
144 Ga0207668_10288420 3300025972 Bacteria 1349
145 Ga0207658_10001387 3300025986 Bacteria 18876
146 Ga0207677_10001032 3300026023 Bacteria 15333
147 Ga0207703_10000276 3300026035 Bacteria 56786
148 Ga0207703_10313283 3300026035 Bacteria 1435
149 Ga0207708_10009197 3300026075 Bacteria 7312
150 Ga0207648_10179255 3300026089 Bacteria 1875
151 Ga0207674_10470211 3300026116 Bacteria 1215
152 Ga0207675_100037475 3300026118 Bacteria 4522
153 Ga0207698_10171616 3300026142 Bacteria 1910
154 Ga0209969_1002737 3300027360 Bacteria 2442
155 Ga0209967_1016818 3300027364 Bacteria 1052
156 Ga0209996_1004686 3300027395 Bacteria 1743
157 Ga0210000_1000385 3300027462 Bacteria 6217
158 Ga0209995_1003173 3300027471 Bacteria 2613
159 Ga0268265_10012550 3300028380 Bacteria 5743
160 Ga0268264_10096735 3300028381 Bacteria 2558
161 Ga0268264_10135744 3300028381 Bacteria 2187
162 Ga0265327_10011782 3300031251 Bacteria 5983
163 Ga0265316_10075561 3300031344 Bacteria 2591
164 Ga0307513_10147817 3300031456 Bacteria 2265
165 Ga0307414_10064956 3300032004 Bacteria 2601
166 Ga0373928_0037439 3300035084 Bacteria 1101
167 Ga0373952_0002856 3300035092 Bacteria 3121
168 Ga0373923_0092086 3300035111 Bacteria 1327
169 Ga0373939_0110803 3300035114 Bacteria 955
170 Ga0373960_0116348 3300035121 Bacteria 883
171 Ga0373943_0107316 3300035170 Bacteria 1468
172 Ga0373946_0004147 3300035171 Bacteria 5160
173 Ga0373955_0272635 3300035172 Bacteria 1017
174 Ga0373931_0041352 3300035691 Bacteria 2421
175 Ga0373947_0005323 3300035725 Bacteria 7521
176 Ga0373937_0012555 3300036401 Bacteria 7452
177 Ga0373937_0253410 3300036401 Bacteria 1659
178 Ga0373925_0010886 3300037068 Bacteria 6598
179 Ga0395899_0000355 3300037312 Bacteria 56049
180 Ga0395900_0053404 3300037418 Bacteria 4159
181 Ga0395898_0019492 3300037466 Bacteria 6901
182 Ga0395905_0079742 3300037471 Bacteria 3068
183 Ga0395905_0611626 3300037471 Bacteria 992
184 Ga0436364_0047121 3300037853 Bacteria 2605
185 Ga0395901_0007935 3300038443 Bacteria 10709
186 Ga0436365_0028582 3300039437 Bacteria 2730
187 Ga0436365_0151785 3300039437 Bacteria 3389
188 Ga0436360_0036835 3300039438 Bacteria 1531
189 Ga0436360_0376975 3300039438 Bacteria 5593
190 Ga0436360_0850652 3300039438 Bacteria 2206
191 Ga0436361_0301549 3300039447 Bacteria 10946
192 Ga0436361_0561412 3300039447 Bacteria 1303
193 Ga0436361_0755574 3300039447 Bacteria 2362
194 Ga0436361_0870435 3300039447 Bacteria 10998
195 Ga0436361_1081799 3300039447 Bacteria 2058
196 Ga0436361_1216842 3300039447 Bacteria 1890
197 Ga0439455_0001573 3300042012 Bacteria 3877
198 Ga0439434_0021467 3300042435 Bacteria 1940
199 Ga0451577_0055562 3300042876 Bacteria 3532
200 Ga0466964_0002619 3300044706 Bacteria 6435
201 Ga0451576_0153851 3300045051 Bacteria 2399
202 Ga0466958_0000855 3300045836 Bacteria 13547
203 Ga0466967_0247746 3300045976 Bacteria 1701
204 Ga0495592_0034159 3300046454 Bacteria 3834
205 Ga0495603_0128675 3300046455 Bacteria 1475
206 Ga0495629_0004167 3300046459 Bacteria 10851
207 Ga0495582_0008025 3300046473 Bacteria 5827
208 Ga0495605_0001269 3300046474 Bacteria 16723
209 Ga0495605_0002220 3300046474 Bacteria 12125
210 Ga0495631_0054171 3300046518 Bacteria 1750
211 Ga0495632_0024432 3300046519 Bacteria 3209
212 Ga0495643_0009641 3300046522 Bacteria 5984
213 Ga0495597_0085782 3300046542 Bacteria 1341
214 Ga0495622_0054378 3300046557 Bacteria 1857
215 Ga0495622_0166613 3300046557 Bacteria 992
216 Ga0495633_0001667 3300046558 Bacteria 16758
217 Ga0495647_0011776 3300046681 Bacteria 3001
218 Ga0495647_0195720 3300046681 Bacteria 885
219 Ga0495658_0029920 3300046683 Bacteria 2952
220 Ga0495613_0033396 3300046689 Bacteria 3824
221 Ga0495581_0159491 3300047315 Bacteria 1318
222 Ga0495676_0080556 3300047321 Bacteria 2472
223 Ga0495680_0040717 3300047322 Bacteria 3700
224 Ga0495679_018932 3300047446 Bacteria 2432
225 Ga0495593_0058710 3300047673 Bacteria 2017
226 Ga0495626_0002361 3300048091 Bacteria 13240
227 Ga0495626_0002442 3300048091 Bacteria 12899
228 Ga0496101_0124138 3300048904 Bacteria 1955
229 Ga0496102_0071555 3300048905 Bacteria 3184
230 Ga0496104_0014708 3300048907 Bacteria 7071
231 Ga0496104_0289869 3300048907 Bacteria 1549
232 Ga0496106_0019131 3300048909 Bacteria 5077
233 Ga0496106_0087685 3300048909 Bacteria 2398
234 Ga0496106_0945695 3300048909 Bacteria 679
235 Ga0496107_0256094 3300048910 Bacteria 1302
236 Ga0496108_0053995 3300048911 Bacteria 3371
237 Ga0496109_0048271 3300048912 Bacteria 3873
238 Ga0496111_0051828 3300048914 Bacteria 2963
239 Ga0496112_0079515 3300048915 Bacteria 3243
240 Ga0496112_0103328 3300048915 Bacteria 2819
241 Ga0496115_0078182 3300048918 Bacteria 2691
242 Ga0496116_0207402 3300048919 Bacteria 1019
243 Ga0496117_0000132 3300048920 Bacteria 162117
244 Ga0496118_0000099 3300048921 Bacteria 160412
245 Ga0496121_0004917 3300048924 Bacteria 17534
246 Ga0496122_0003476 3300048925 Bacteria 20726
247 Ga0496123_0003509 3300048926 Bacteria 17468
248 Ga0496124_0031244 3300048927 Bacteria 4717
249 Ga0501047_0168490 3300049581 Bacteria 2060
250 nmdc:mga03683_25804_c1 3300050489 Bacteria 2312
251 nmdc:mga07m45_6661_c1 3300050496 Bacteria 2083
252 nmdc:mga05p37_34384_c1 3300050507 Bacteria 6208
253 nmdc:mga08y16_341199_c1 3300050511 Bacteria 1540
254 nmdc:mga0n895_320846_c1 3300050512 Bacteria 1570
255 nmdc:mga0n895_407465_c1 3300050512 Bacteria 1375
256 nmdc:mga08x19_2825_c1 3300050514 Bacteria 10474
257 nmdc:mga08x19_9797_c1 3300050514 Bacteria 5740
258 nmdc:mga0sz30_40889_c2 3300050516 Bacteria 1447
259 nmdc:mga0sz30_77916_c1 3300050516 Bacteria 1432
260 Ga0495619_0000335 3300053085 Bacteria 33006
261 Ga0500583_0138201 3300053092 Bacteria 1210
262 Ga0587109_022160 3300059624 Bacteria 1141
263 2509074766 2508501114 Bacteria 7082538
264 2601670190 2600255292 Bacteria 6300551
265 2617352349 2617270735 Bacteria 9163226
266 2723845826 2721755755 Bacteria 8322773
267 2765568309 2765235838 Bacteria 5445269
268 2776266298 2775506901 Bacteria 9631051
269 2839094831 2839094727 Bacteria 5534556
270 2857553080 2857547612 Bacteria 6179999
271 2885084272 2885080285 Bacteria 6355622
272 2932413697 2932410948 Bacteria 6312192
273 2932417757 2932416698 Bacteria 6315112
274 Ga0068855_100000006
275 ARcpr5yngRDRAFT_c004091
276 ARSoilOldRDRAFT_c001726
277 Ga0065714_10190310
278 Ga0070658_10034787
279 Ga0070658_10056016
280 Ga0070666_10001366
281 Ga0070680_100256909
282 Ga0070682_100402080
283 Ga0068868_100000635
284 Ga0070660_100002748
285 Ga0070691_10002284
286 Ga0070691_10020716
287 Ga0070668_100015477
288 Ga0070668_100281493
289 Ga0070668_100679806
290 Ga0070671_100007160
291 Ga0070671_100188952
292 Ga0070671_100209030
293 Ga0070671_100430457
294 Ga0070673_100004693
295 Ga0070688_100174484
296 Ga0070667_100001121
297 Ga0070713_100291914
298 Ga0070710_10030622
299 Ga0070710_10299668
300 Ga0070700_100019810
301 Ga0070708_100000245
302 Ga0070708_100155500
303 Ga0070663_100270919
304 Ga0070662_100305717
305 Ga0070681_10101983
306 Ga0068867_100112631
307 Ga0070684_100252442
308 Ga0068853_100145356
309 Ga0070686_100037139
310 Ga0070695_100010948
311 Ga0070695_100076651
312 Ga0068855_100000899
313 Ga0068855_100022575
314 Ga0068857_100451434
315 Ga0068856_100003185
316 Ga0068852_100020557
317 Ga0068864_100079024
318 Ga0068866_10029962
319 Ga0068863_100192168
320 Ga0068863_100277158
321 Ga0068858_100000438
322 Ga0068858_100340600
323 Ga0068860_100116190
324 Ga0068860_100156379
325 Ga0068862_100007454
326 Ga0081540_1008920
327 Ga0070717_10281157
328 Ga0070712_100000374
329 Ga0075362_10015110
330 Ga0075369_10064827
331 Ga0075366_10030575
332 Ga0075370_10010954
333 Ga0075428_100030991
334 Ga0075434_100292617
335 Ga0075434_100426340
336 Ga0075434_100541382
337 Ga0075434_101070013
338 Ga0068865_100371911
339 Ga0075436_100014089
340 Ga0075436_100133813
341 Ga0079104_1009366
342 Ga0105240_10009234
343 Ga0105240_10220819
344 Ga0105240_10354117
345 Ga0105240_10404960
346 Ga0111539_10721577
347 Ga0105245_10000584
348 Ga0105245_10245153
349 Ga0105245_10462074
350 Ga0114129_10047197
351 Ga0105241_10062680
352 Ga0105242_10386828
353 Ga0105248_10000119
354 Ga0105248_10754846
355 Ga0105237_10000915
356 Ga0105237_10460696
357 Ga0105238_10003841
358 Ga0105238_10027411
359 Ga0105249_10217769
360 Ga0105239_10027635
361 Ga0105239_10299464
362 Ga0105246_10068357
363 Ga0105246_10101240
364 Ga0157373_10001433
365 Ga0157369_10030815
366 Ga0157374_10000737
367 Ga0157378_10161432
368 Ga0157378_10378709
369 Ga0163162_10267427
370 Ga0157372_10007187
371 Ga0157375_10066468
372 Ga0157375_10138374
373 Ga0163163_10012078
374 Ga0182008_10001243
375 Ga0157379_10010447
376 Ga0157379_10171838
377 Ga0182006_1000097
378 Ga0182007_10000227
379 Ga0182005_1000038
380 Ga0163161_10050266
381 Ga0163161_10170150
382 Ga0163161_10255039
383 Ga0213872_10002934
384 Ga0213872_10011227
385 Ga0213872_10026923
386 Ga0213871_10036134
387 Ga0209026_1002428
388 Ga0207642_10117272
389 Ga0207680_10001167
390 Ga0207647_10000447
391 Ga0207695_10015602
392 Ga0207695_10125679
393 Ga0207671_10012577
394 Ga0207693_10000857
395 Ga0207663_10071539
396 Ga0207660_10346544
397 Ga0207657_10001992
398 Ga0207694_10000623
399 Ga0207694_10027047
400 Ga0207694_10190899
401 Ga0207687_10002258
402 Ga0207644_10009316
403 Ga0207644_10046731
404 Ga0207644_10101393
405 Ga0207644_10142321
406 Ga0207644_10201865
407 Ga0207706_10097110
408 Ga0207711_10000047
409 Ga0207711_10043770
410 Ga0207689_10268214
411 Ga0207667_10000053
412 Ga0207667_10000202
413 Ga0207667_10005173
414 Ga0207651_10019166
415 Ga0207712_10270712
416 Ga0207668_10009222
417 Ga0207668_10288420
418 Ga0207658_10001387
419 Ga0207677_10001032
420 Ga0207703_10000276
421 Ga0207703_10313283
422 Ga0207708_10009197
423 Ga0207648_10179255
424 Ga0207674_10470211
425 Ga0207675_100037475
426 Ga0207698_10171616
427 Ga0209969_1002737
428 Ga0209967_1016818
429 Ga0209996_1004686
430 Ga0210000_1000385
431 Ga0209995_1003173
432 Ga0268265_10012550
433 Ga0268264_10096735
434 Ga0268264_10135744
435 Ga0265327_10011782
436 Ga0265316_10075561
437 Ga0307513_10147817
438 Ga0307414_10064956
439 Ga0373928_0037439
440 Ga0373952_0002856
441 Ga0373923_0092086
442 Ga0373939_0110803
443 Ga0373960_0116348
444 Ga0373943_0107316
445 Ga0373946_0004147
446 Ga0373955_0272635
447 Ga0373931_0041352
448 Ga0373947_0005323
449 Ga0373937_0012555
450 Ga0373937_0253410
451 Ga0373925_0010886
452 Ga0395899_0000355
453 Ga0395900_0053404
454 Ga0395898_0019492
455 Ga0395905_0079742
456 Ga0395905_0611626
457 Ga0436364_0047121
458 Ga0395901_0007935
459 Ga0436365_0028582
460 Ga0436365_0151785
461 Ga0436360_0036835
462 Ga0436360_0376975
463 Ga0436360_0850652
464 Ga0436361_0301549
465 Ga0436361_0561412
466 Ga0436361_0755574
467 Ga0436361_0870435
468 Ga0436361_1081799
469 Ga0436361_1216842
470 Ga0439455_0001573
471 Ga0439434_0021467
472 Ga0451577_0055562
473 Ga0466964_0002619
474 Ga0451576_0153851
475 Ga0466958_0000855
476 Ga0466967_0247746
477 Ga0495592_0034159
478 Ga0495603_0128675
479 Ga0495629_0004167
480 Ga0495582_0008025
481 Ga0495605_0001269
482 Ga0495605_0002220
483 Ga0495631_0054171
484 Ga0495632_0024432
485 Ga0495643_0009641
486 Ga0495597_0085782
487 Ga0495622_0054378
488 Ga0495622_0166613
489 Ga0495633_0001667
490 Ga0495647_0011776
491 Ga0495647_0195720
492 Ga0495658_0029920
493 Ga0495613_0033396
494 Ga0495581_0159491
495 Ga0495676_0080556
496 Ga0495680_0040717
497 Ga0495679_018932
498 Ga0495593_0058710
499 Ga0495626_0002361
500 Ga0495626_0002442
501 Ga0496101_0124138
502 Ga0496102_0071555
503 Ga0496104_0014708
504 Ga0496104_0289869
505 Ga0496106_0019131
506 Ga0496106_0087685
507 Ga0496106_0945695
508 Ga0496107_0256094
509 Ga0496108_0053995
510 Ga0496109_0048271
511 Ga0496111_0051828
512 Ga0496112_0079515
513 Ga0496112_0103328
514 Ga0496115_0078182
515 Ga0496116_0207402
516 Ga0496117_0000132
517 Ga0496118_0000099
518 Ga0496121_0004917
519 Ga0496122_0003476
520 Ga0496123_0003509
521 Ga0496124_0031244
522 Ga0501047_0168490
523 nmdc:mga03683_25804_c1
524 nmdc:mga07m45_6661_c1
525 nmdc:mga05p37_34384_c1
526 nmdc:mga08y16_341199_c1
527 nmdc:mga0n895_320846_c1
528 nmdc:mga0n895_407465_c1
529 nmdc:mga08x19_2825_c1
530 nmdc:mga08x19_9797_c1
531 nmdc:mga0sz30_40889_c2
532 nmdc:mga0sz30_77916_c1
533 Ga0495619_0000335
534 Ga0500583_0138201
535 Ga0587109_022160
536 2509074766
537 2601670190
538 2617352349
539 2723845826
540 2765568309
541 2776266298
542 2839094831
543 2857553080
544 2885084272
545 2932413697
546 2932417757

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

40

234

0.98

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

46

291

0.91

PF08659

KR

KR domain

41

217

0.87

PF23441

33

292

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
8dt1-assembly1.cif.gz_C crystal structure of a putative d-beta-hydroxybutyrate dehydrogenase from burkholderia cenocepacia j2315 in complex with nad 0.9784 3 259
4trr-assembly2.cif.gz_E crystal structure of a putative putative d-beta-hydroxybutyrate dehydrogenase from burkholderia cenocepacia j2315 0.9779 3 259
8dt1-assembly1.cif.gz_A crystal structure of a putative d-beta-hydroxybutyrate dehydrogenase from burkholderia cenocepacia j2315 in complex with nad 0.9767 3 259
8dt1-assembly1.cif.gz_D crystal structure of a putative d-beta-hydroxybutyrate dehydrogenase from burkholderia cenocepacia j2315 in complex with nad 0.9751 3 259
4trr-assembly1.cif.gz_D crystal structure of a putative putative d-beta-hydroxybutyrate dehydrogenase from burkholderia cenocepacia j2315 0.9742 3 259
ID Description Score Start End Superfamily
4trrG00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9784 4 259 3.40.50.720
4trrG00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9741 4 259 3.40.50.720
4trrC00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9703 1 259 3.40.50.720
af_A0A1D6ED38_49_231_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9672 3 181 3.40.50.720
4trrC00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9665 1 259 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A504F657-F1-model_v4 deleted 0.9922 2 259
AF-T0YFG4-F1-model_v4 D-beta-hydroxybutyrate dehydrogenase 0.9872 6 237 GO:0016491
AF-A0A504F657-F1-model_v4 deleted 0.9846 2 259
AF-A0A6I3GGR1-F1-model_v4 SDR family NAD(P)-dependent oxidoreductase 0.9838 2 184 GO:0005829
GO:0009688
GO:0010301
AF-Q0G318-F1-model_v4 D-beta-hydroxybutyrate dehydrogenase 0.9832 2 259 GO:0003858

Map