F378817

General Info

Members Datasets Scaffolds Average Seq Length
273 174 252 733

Family's Representative Sequence

Representative Sequence 3300005329|Ga0070683_100001663|Ga0070683_10000166313
Length 798
Sequence MPRVSRDTRGSFEIIQITLNPDGVLFLPVTSARHNLFLALLLSKEGMGRLIIISNRLPFSLDKEGDKVSIRQSSGGLVSAIKSYFENTAAQKGEITEKMWMGVADFPQEDWDQAAASHAAEQDFGILPVFVDKDLYHNYYNGFSNSVLWPLFHYFTSLADYQNEYFDAYVKVNQQFAETLLPQLRQDDQVWIHDYQLMILPHLLRSKRPEATIGFFLHIPFPSYEIFRLMPTEWKKTLLHGVMGADLIGFHTYDYVQHFLQSVRMLMGSENHFHTLQYMNRLIRIDLFPIGIDYNKFHDAGGDPEVEEYRNKLRASLEDKKIIFSVDRLDYTKGVMQRLNGFEYFLERYPEWREKMVFILNIVPSRDTIPAYNERKKQIEEKVGTINGRFSTIGWQPFIYRYNHLSFPELIALYQAADVALITPLRDGMNLVAKEYVAASLGRGVLILSELAGAAAELSEAILVNPTDITDVASSITRALAMPLYEQRNRISLMQRRLQEYDVFKWVNDFMDQLVQVKQEQRKQAVKLLDDKTISSVRRHYQRAKNRCLLLDYDGTLVPFTRLPSEAAPDNAVRDLLTRLSADARNHVVVISGRDLSSLDRWLGELPITLVAEHGASFKMRNSTWQQMVSVSDLWKDEIRRIMQLFVLRCAGSFIEEKTNTIAWHYRNTQAGLGFSRSRELLNTLSQLTQNTTLQVIDGNKVVEVRIAGFDKGATALRIVGEMDPDFALCIGDDTTDEDMFKALDGEAYTIKVNNGATAAQYTILSQQEVLPLLNTITQSAPTGSPAEGHILDEYAGS

Samples

Sample ID Description Type Environment
1 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
2 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
3 2721755487 Sphingobacterium sp. B29 Isolate Rhizosphere
4 2738543023 Pedobacter sp. OK628 Isolate Unclassified
5 2739367651 Pedobacter sp. OK291 Isolate Unclassified
6 2739367656 Pedobacter sp. CF523 Isolate Unclassified
7 2739367866 Hymenobacter sp. YR204 Isolate Unclassified
8 2818991444 Filimonas endophytica 3197 Isolate Unclassified
9 2839989709 Pontibacter arcticus 2b14 Isolate Unclassified
10 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
11 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
12 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
13 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
14 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
15 2904780799 Sphingobacterium sp. 1304 Isolate Rhizosphere
16 2910245624 Adhaeribacter radiodurans KUDC8001 Isolate Rhizosphere
17 2919177583 Sphingobacterium sp. 2149 Isolate Rhizosphere
18 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
19 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
20 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
21 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
22 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
23 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
24 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
25 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
26 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
27 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
28 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
29 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
30 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
31 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
32 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
33 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
34 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
35 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
36 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
37 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
38 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
39 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
40 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
41 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
42 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
43 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
44 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
45 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
46 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
47 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
48 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
49 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
50 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
51 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
52 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
53 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
54 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
55 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
56 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
57 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
58 3300009979 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_126 metaG Metagenome Rhizosphere
59 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
60 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
61 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
62 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
63 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
64 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
65 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
66 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
67 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
68 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
69 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
70 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
71 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
72 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
73 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
74 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
75 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
76 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
77 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
79 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
106 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
107 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
108 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
109 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
110 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
111 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
112 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
113 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
114 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
115 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
116 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
117 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
118 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
119 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
120 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
121 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
122 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
123 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
124 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
125 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
126 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
127 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
128 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
129 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
130 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
131 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
132 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
133 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
134 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
135 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
136 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
137 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
138 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
139 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
140 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
141 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
142 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
143 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
149 3300049651 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F3_A_0_drought Metagenome Rhizosphere
150 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
151 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
152 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
153 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
154 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
155 3300049670 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought Metagenome Rhizosphere
156 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
157 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
158 3300049689 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A15_A_4_drought Metagenome Rhizosphere
159 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
160 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
161 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049851 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_B_0_drought Metagenome Rhizosphere
164 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
165 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
166 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
167 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
168 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
169 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
170 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
171 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
172 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
173 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
174 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.94
Metatranscriptomes 0.37
Isolates 7.69

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.69
Nodule 0
Rhizoplane 0
Rhizosphere 82.78
Stem 0
Stem Tuber 0
Unclassified 9.52

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25162J39368_1000020 3300002737 Bacteria 254723
2 rootH2_10001886 3300003320 Bacteria 115156
3 rootH2_10004334 3300003320 Bacteria 85448
4 rootH2_10017223 3300003320 Bacteria 29468
5 rootH2_10019867 3300003320 Bacteria 13396
6 rootH2_10059243 3300003320 Bacteria 9365
7 rootL2_10025762 3300003322 Bacteria 5254
8 rootL2_10036871 3300003322 Bacteria 7980
9 rootH1_10060519 3300003323 Bacteria 24841
10 rootH1_10084010 3300003323 Bacteria 8758
11 rootH1_10085060 3300003323 Bacteria 5460
12 Ga0055536_1000001 3300003781 Bacteria 630663
13 Ga0065165_1000169 3300005262 Bacteria 115398
14 Ga0065165_1001546 3300005262 Bacteria 24022
15 Ga0065714_10002401 3300005288 Bacteria 37191
16 Ga0065714_10064548 3300005288 Bacteria 37532
17 Ga0065714_10068187 3300005288 Bacteria 4908
18 Ga0065714_10080492 3300005288 Bacteria 2431
19 Ga0070683_100001663 3300005329 Bacteria 17244
20 Ga0070683_100004953 3300005329 Bacteria 11048
21 Ga0070683_100043016 3300005329 Unclassified 4161
22 Ga0070670_100035717 3300005331 Bacteria 4278
23 Ga0070670_100043264 3300005331 Bacteria 3872
24 Ga0070670_100048796 3300005331 Bacteria 3643
25 Ga0068868_100040466 3300005338 Bacteria 3628
26 Ga0070660_100068097 3300005339 Bacteria 2774
27 Ga0070689_100061155 3300005340 Unclassified 2929
28 Ga0070675_100005524 3300005354 Bacteria 9676
29 Ga0070671_100048538 3300005355 Unclassified 3530
30 Ga0070688_100015605 3300005365 Bacteria 4328
31 Ga0070667_100000001 3300005367 Bacteria 1108638
32 Ga0070663_100004474 3300005455 Bacteria 8226
33 Ga0070662_100009312 3300005457 Bacteria 6418
34 Ga0070681_10021792 3300005458 Bacteria 6425
35 Ga0068867_100041074 3300005459 Unclassified 3380
36 Ga0068853_100003277 3300005539 Bacteria 12381
37 Ga0068853_100015166 3300005539 Bacteria 6336
38 Ga0070665_100000009 3300005548 Bacteria 562640
39 Ga0068855_100000001 3300005563 Bacteria 818777
40 Ga0068855_100000501 3300005563 Bacteria 48446
41 Ga0068855_100000652 3300005563 Bacteria 42351
42 Ga0068855_100004139 3300005563 Bacteria 17695
43 Ga0068855_100049034 3300005563 Bacteria 4983
44 Ga0068855_100060026 3300005563 Unclassified 4448
45 Ga0070664_100000624 3300005564 Bacteria 27096
46 Ga0070664_100017184 3300005564 Bacteria 5939
47 Ga0068857_100003395 3300005577 Bacteria 13260
48 Ga0068857_100025269 3300005577 Bacteria 5231
49 Ga0068856_100000259 3300005614 Bacteria 57810
50 Ga0068852_100007803 3300005616 Bacteria 7837
51 Ga0068852_100010949 3300005616 Bacteria 6798
52 Ga0068864_100001293 3300005618 Bacteria 20857
53 Ga0068860_100000033 3300005843 Bacteria 245461
54 Ga0068860_100002835 3300005843 Bacteria 18021
55 Ga0068860_100070929 3300005843 Unclassified 3312
56 Ga0075365_10035727 3300006038 Bacteria 3217
57 Ga0075366_10003891 3300006195 Bacteria 7960
58 Ga0105240_10000143 3300009093 Bacteria 146858
59 Ga0105240_10000551 3300009093 Bacteria 69267
60 Ga0105240_10001019 3300009093 Bacteria 49967
61 Ga0105240_10002786 3300009093 Bacteria 27633
62 Ga0105243_10000008 3300009148 Bacteria 390270
63 Ga0105241_10000003 3300009174 Bacteria 839043
64 Ga0105241_10007632 3300009174 Bacteria 7951
65 Ga0105241_10035962 3300009174 Unclassified 3726
66 Ga0105237_10000860 3300009545 Bacteria 41294
67 Ga0105237_10001907 3300009545 Bacteria 26596
68 Ga0105237_10001926 3300009545 Bacteria 26486
69 Ga0105237_10006247 3300009545 Bacteria 13266
70 Ga0105237_10015047 3300009545 Bacteria 8063
71 Ga0105237_10021884 3300009545 Bacteria 6567
72 Ga0105237_10025802 3300009545 Bacteria 6009
73 Ga0105237_10028425 3300009545 Bacteria 5696
74 Ga0105238_10091830 3300009551 Bacteria 3023
75 Ga0105032_100009 3300009979 Bacteria 86569
76 Ga0105239_10000013 3300010375 Bacteria 327371
77 Ga0105239_10000081 3300010375 Bacteria 133686
78 Ga0105239_10000259 3300010375 Bacteria 78760
79 Ga0105239_10001123 3300010375 Bacteria 36883
80 Ga0105239_10001173 3300010375 Bacteria 36001
81 Ga0105239_10002015 3300010375 Bacteria 26351
82 Ga0105239_10026101 3300010375 Bacteria 6431
83 Ga0105239_10075071 3300010375 Bacteria 3717
84 Ga0157373_10002056 3300013100 Bacteria 15248
85 Ga0157371_10000021 3300013102 Bacteria 301017
86 Ga0157371_10003712 3300013102 Bacteria 13693
87 Ga0157371_10012231 3300013102 Bacteria 6571
88 Ga0157370_10004199 3300013104 Bacteria 16664
89 Ga0157370_10057825 3300013104 Bacteria 3686
90 Ga0157370_10080617 3300013104 Bacteria 3064
91 Ga0157369_10000008 3300013105 Bacteria 309315
92 Ga0157374_10000002 3300013296 Bacteria 1054226
93 Ga0157374_10003511 3300013296 Bacteria 13185
94 Ga0157374_10005215 3300013296 Bacteria 10896
95 Ga0163162_10001586 3300013306 Bacteria 21251
96 Ga0157372_10001318 3300013307 Bacteria 26876
97 Ga0157372_10008199 3300013307 Bacteria 11101
98 Ga0163163_10000291 3300014325 Bacteria 49869
99 Ga0163163_10001289 3300014325 Bacteria 21169
100 Ga0157380_10016450 3300014326 Bacteria 5456
101 Ga0182008_10004697 3300014497 Bacteria 7926
102 Ga0157376_10003825 3300014969 Bacteria 10411
103 Ga0182006_1000412 3300015261 Bacteria 34522
104 Ga0182006_1000558 3300015261 Bacteria 27941
105 Ga0182007_10000003 3300015262 Bacteria 548244
106 Ga0183373_1001 3300015682 Bacteria 1410374
107 Ga0163161_10000453 3300017792 Bacteria 34026
108 Ga0163161_10001234 3300017792 Bacteria 19173
109 Ga0224712_10010423 3300022467 Bacteria 2843
110 Ga0209437_100085 3300025233 Bacteria 254790
111 Ga0209676_1000008 3300025292 Bacteria 991778
112 Ga0209676_1000658 3300025292 Bacteria 49529
113 Ga0209050_1000045 3300025298 Bacteria 388022
114 Ga0209050_1013904 3300025298 Bacteria 3524
115 Ga0207647_10000167 3300025904 Bacteria 52189
116 Ga0207647_10000282 3300025904 Bacteria 41535
117 Ga0207647_10013648 3300025904 Bacteria 5625
118 Ga0207654_10000002 3300025911 Bacteria 1460142
119 Ga0207654_10004750 3300025911 Bacteria 6881
120 Ga0207707_10020199 3300025912 Bacteria 5815
121 Ga0207695_10000016 3300025913 Bacteria 771991
122 Ga0207695_10000390 3300025913 Bacteria 99095
123 Ga0207695_10000758 3300025913 Bacteria 62084
124 Ga0207695_10001564 3300025913 Bacteria 37432
125 Ga0207695_10011306 3300025913 Bacteria 10820
126 Ga0207695_10071633 3300025913 Bacteria 3539
127 Ga0207671_10000103 3300025914 Bacteria 129408
128 Ga0207671_10001539 3300025914 Bacteria 26435
129 Ga0207671_10001803 3300025914 Bacteria 23938
130 Ga0207671_10004036 3300025914 Bacteria 14246
131 Ga0207671_10005060 3300025914 Bacteria 12313
132 Ga0207671_10010090 3300025914 Bacteria 7829
133 Ga0207671_10014952 3300025914 Bacteria 6100
134 Ga0207649_10016299 3300025920 Bacteria 4187
135 Ga0207650_10055099 3300025925 Bacteria 2951
136 Ga0207706_10024899 3300025933 Bacteria 5365
137 Ga0207709_10000006 3300025935 Bacteria 800946
138 Ga0207670_10008020 3300025936 Bacteria 5936
139 Ga0207691_10010012 3300025940 Bacteria 9099
140 Ga0207689_10002368 3300025942 Bacteria 17602
141 Ga0207661_10010748 3300025944 Bacteria 6599
142 Ga0207679_10003368 3300025945 Bacteria 9865
143 Ga0207667_10000003 3300025949 Bacteria 822935
144 Ga0207667_10000754 3300025949 Bacteria 42027
145 Ga0207667_10001001 3300025949 Bacteria 36044
146 Ga0207667_10004657 3300025949 Bacteria 16809
147 Ga0207667_10010592 3300025949 Bacteria 10769
148 Ga0207658_10000003 3300025986 Bacteria 1151934
149 Ga0207677_10047751 3300026023 Bacteria 2877
150 Ga0207639_10017741 3300026041 Bacteria 5047
151 Ga0207639_10021721 3300026041 Bacteria 4613
152 Ga0207639_10051316 3300026041 Bacteria 3137
153 Ga0207678_10009117 3300026067 Bacteria 8737
154 Ga0207702_10001400 3300026078 Bacteria 24060
155 Ga0207676_10009966 3300026095 Bacteria 6759
156 Ga0207674_10022754 3300026116 Bacteria 6725
157 Ga0207674_10035141 3300026116 Bacteria 5232
158 Ga0207698_10007520 3300026142 Bacteria 6828
159 Ga0209974_10002111 3300027876 Bacteria 7276
160 Ga0268266_10000014 3300028379 Bacteria 644033
161 Ga0268264_10000013 3300028381 Bacteria 513859
162 Ga0268264_10005678 3300028381 Bacteria 10577
163 Ga0268264_10054615 3300028381 Unclassified 3336
164 Ga0307517_10001332 3300028786 Bacteria 41501
165 Ga0307515_10002415 3300028794 Bacteria 40755
166 Ga0265338_10065395 3300028800 Bacteria 3155
167 Ga0307511_10000783 3300030521 Bacteria 33900
168 Ga0316183_1071799 3300030742 Unclassified 2603
169 Ga0316183_1110699 3300030742 Bacteria 2699
170 Ga0316181_1123581 3300030744 Bacteria 76132
171 Ga0316182_1306572 3300030745 Bacteria 15928
172 Ga0265339_10004637 3300031249 Bacteria 9344
173 Ga0307408_100039722 3300031548 Unclassified 3329
174 Ga0307516_10005412 3300031730 Bacteria 15304
175 Ga0307405_10000069 3300031731 Bacteria 47710
176 Ga0307407_10000022 3300031903 Bacteria 120355
177 Ga0307416_100000047 3300032002 Bacteria 120385
178 Ga0307414_10010269 3300032004 Bacteria 5423
179 Ga0307507_10000217 3300033179 Bacteria 109884
180 Ga0439449_0000190 3300042007 Bacteria 21531
181 Ga0450918_000192 3300042531 Bacteria 13713
182 Ga0451577_0000006 3300042876 Bacteria 709265
183 Ga0451577_0017166 3300042876 Bacteria 6690
184 Ga0451577_0087594 3300042876 Bacteria 2778
185 Ga0466972_0012893 3300044658 Bacteria 4197
186 Ga0453683_0000117 3300044673 Bacteria 117510
187 Ga0453683_0010458 3300044673 Bacteria 6146
188 Ga0453683_0073602 3300044673 Bacteria 2139
189 Ga0466965_0019338 3300044683 Bacteria 3270
190 Ga0453684_0000037 3300044712 Bacteria 709327
191 Ga0453684_0001421 3300044712 Bacteria 68890
192 Ga0453684_0005343 3300044712 Bacteria 25589
193 Ga0453684_0006388 3300044712 Bacteria 22454
194 Ga0453684_0010348 3300044712 Bacteria 15964
195 Ga0453684_0010652 3300044712 Bacteria 15657
196 Ga0453684_0018697 3300044712 Bacteria 10617
197 Ga0453684_0093150 3300044712 Unclassified 3712
198 Ga0451576_0041141 3300045051 Bacteria 4887
199 Ga0451576_0044098 3300045051 Bacteria 4703
200 Ga0451576_0047907 3300045051 Bacteria 4492
201 Ga0495638_0000004 3300046460 Bacteria 700795
202 Ga0495638_0017827 3300046460 Bacteria 4726
203 Ga0495585_0003908 3300046492 Bacteria 9881
204 Ga0495606_0003908 3300046507 Bacteria 15341
205 Ga0495610_0000066 3300046512 Bacteria 124205
206 Ga0495610_0001118 3300046512 Bacteria 24451
207 Ga0495630_0043137 3300046517 Bacteria 3369
208 Ga0495648_0009542 3300046524 Bacteria 7494
209 Ga0495609_0003523 3300046538 Bacteria 8921
210 Ga0495668_0000003 3300046616 Bacteria 695023
211 Ga0495611_0000057 3300046648 Bacteria 80239
212 Ga0495625_0005138 3300046660 Bacteria 12082
213 Ga0495672_0000694 3300047320 Bacteria 37308
214 Ga0495687_000118 3300047443 Bacteria 121601
215 Ga0495686_0000016 3300047472 Bacteria 443701
216 Ga0495686_0001067 3300047472 Bacteria 32642
217 Ga0496117_0018041 3300048920 Bacteria 5869
218 Ga0496122_0032039 3300048925 Bacteria 4356
219 Ga0501031_0026194 3300049568 Bacteria 3803
220 Ga0501036_0001958 3300049572 Bacteria 15990
221 Ga0501037_0033758 3300049573 Bacteria 3778
222 Ga0501038_0033813 3300049574 Bacteria 4499
223 Ga0501043_0035269 3300049579 Bacteria 3934
224 Ga0501198_000192 3300049649 Bacteria 7992
225 Ga0501201_000600 3300049651 Bacteria 3340
226 Ga0501202_000553 3300049652 Bacteria 5434
227 Ga0501217_000707 3300049661 Bacteria 5727
228 Ga0501223_000467 3300049663 Bacteria 9760
229 Ga0501233_000837 3300049668 Bacteria 5172
230 Ga0501235_001204 3300049669 Bacteria 5437
231 Ga0501236_000135 3300049670 Bacteria 7309
232 Ga0501257_000656 3300049686 Bacteria 6896
233 Ga0501259_000252 3300049688 Bacteria 8439
234 Ga0501260_000491 3300049689 Bacteria 3069
235 Ga0501225_0000661 3300049705 Bacteria 10742
236 Ga0501269_001377 3300049766 Bacteria 3187
237 Ga0501035_0030754 3300049822 Bacteria 4894
238 Ga0501044_0072703 3300049823 Bacteria 3496
239 Ga0501212_001410 3300049851 Bacteria 2699
240 nmdc:mga0yw44_28605_c2 3300050492 Bacteria 2673
241 nmdc:mga06r32_30600_c1 3300050510 Bacteria 5051
242 nmdc:mga08y16_14314_c1 3300050511 Bacteria 8349
243 Ga0500643_000034 3300053087 Bacteria 185705
244 Ga0500583_0004013 3300053092 Bacteria 4731
245 Ga0500555_000001 3300053103 Bacteria 1353713
246 Ga0500568_0004629 3300053139 Bacteria 7324
247 Ga0500604_0001563 3300053151 Bacteria 6412
248 Ga0500622_0000182 3300053156 Bacteria 67645
249 Ga0500622_0000271 3300053156 Bacteria 53232
250 Ga0500622_0002256 3300053156 Bacteria 14178
251 Ga0500624_000656 3300053157 Bacteria 8993
252 Ga0590071_002541 3300059421 Bacteria 4591

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300013102 Ga0157371_10003712 Ga0157371_100037129 598
2 3300044673 Ga0453683_0073602 Ga0453683_0073602_156_2024 609
3 3300003322 rootL2_10036871 rootL2_100368716 627
4 3300013307 Ga0157372_10008199 Ga0157372_100081991 668
5 3300046507 Ga0495606_0003908 Ga0495606_0003908_7206_9275 668
6 3300044712 Ga0453684_0006388 Ga0453684_0006388_2718_4988 679
7 3300046648 Ga0495611_0000057 Ga0495611_0000057_67208_69346 683
8 3300009545 Ga0105237_10025802 Ga0105237_100258025 685
9 3300025914 Ga0207671_10000103 Ga0207671_1000010333 685
10 3300005262 Ga0065165_1000169 Ga0065165_100016980 691
11 3300005331 Ga0070670_100048796 Ga0070670_1000487962 691
12 3300005338 Ga0068868_100040466 Ga0068868_1000404662 691
13 3300005354 Ga0070675_100005524 Ga0070675_1000055245 691
14 3300005355 Ga0070671_100048538 Ga0070671_1000485382 691
15 3300005365 Ga0070688_100015605 Ga0070688_1000156052 691
16 3300005459 Ga0068867_100041074 Ga0068867_1000410742 691
17 3300005564 Ga0070664_100017184 Ga0070664_1000171842 691
18 3300005577 Ga0068857_100025269 Ga0068857_1000252694 691
19 3300005618 Ga0068864_100001293 Ga0068864_1000012938 691
20 3300013296 Ga0157374_10005215 Ga0157374_100052155 691
21 3300014325 Ga0163163_10000291 Ga0163163_1000029144 691
22 3300025292 Ga0209676_1000658 Ga0209676_100065833 691
23 3300025904 Ga0207647_10013648 Ga0207647_100136482 691
24 3300025920 Ga0207649_10016299 Ga0207649_100162992 691
25 3300025925 Ga0207650_10055099 Ga0207650_100550992 691
26 3300025933 Ga0207706_10024899 Ga0207706_100248992 691
27 3300025936 Ga0207670_10008020 Ga0207670_100080201 691
28 3300025940 Ga0207691_10010012 Ga0207691_100100123 691
29 3300025942 Ga0207689_10002368 Ga0207689_1000236810 691
30 3300025945 Ga0207679_10003368 Ga0207679_100033682 691
31 3300026023 Ga0207677_10047751 Ga0207677_100477511 691
32 3300026041 Ga0207639_10051316 Ga0207639_100513162 691
33 3300026095 Ga0207676_10009966 Ga0207676_100099661 691
34 3300026116 Ga0207674_10035141 Ga0207674_100351412 691
35 3300003322 rootL2_10025762 rootL2_100257622 693
36 3300003781 Ga0055536_1000001 Ga0055536_1000001157 693
37 3300025292 Ga0209676_1000008 Ga0209676_1000008702 693
38 3300025298 Ga0209050_1000045 Ga0209050_100004583 693
39 3300025904 Ga0207647_10000167 Ga0207647_1000016722 693
40 3300013104 Ga0157370_10080617 Ga0157370_100806171 694
41 3300013306 Ga0163162_10001586 Ga0163162_1000158615 694
42 3300014497 Ga0182008_10004697 Ga0182008_100046972 694
43 3300013104 Ga0157370_10004199 Ga0157370_100041998 695
44 3300046512 Ga0495610_0000066 Ga0495610_0000066_55153_57348 696
45 3300010375 Ga0105239_10002015 Ga0105239_1000201520 697
46 3300013102 Ga0157371_10000021 Ga0157371_10000021241 697
47 3300013104 Ga0157370_10057825 Ga0157370_100578252 697
48 3300013105 Ga0157369_10000008 Ga0157369_10000008116 697
49 3300015262 Ga0182007_10000003 Ga0182007_10000003147 697
50 3300005288 Ga0065714_10080492 Ga0065714_100804921 698
51 3300017792 Ga0163161_10000453 Ga0163161_100004533 698
52 3300015261 Ga0182006_1000558 Ga0182006_10005582 699
53 3300015682 Ga0183373_1001 Ga0183373_1001824 699
54 3300042007 Ga0439449_0000190 Ga0439449_0000190_13520_15760 699
55 3300044683 Ga0466965_0019338 Ga0466965_0019338_939_3158 699
56 3300017792 Ga0163161_10001234 Ga0163161_100012348 700
57 3300031903 Ga0307407_10000022 Ga0307407_1000002248 700
58 3300032002 Ga0307416_100000047 Ga0307416_10000004748 700
59 3300046512 Ga0495610_0001118 Ga0495610_0001118_15412_17601 700
60 3300005331 Ga0070670_100043264 Ga0070670_1000432643 701
61 3300009093 Ga0105240_10000143 Ga0105240_10000143116 701
62 3300025913 Ga0207695_10000016 Ga0207695_10000016405 701
63 3300050511 nmdc:mga08y16_14314_c1 nmdc:mga08y16_14314_c1_526_2754 703
64 3300044712 Ga0453684_0010348 Ga0453684_0010348_5094_7307 705
65 3300009093 Ga0105240_10000551 Ga0105240_1000055131 706
66 3300010375 Ga0105239_10075071 Ga0105239_100750713 706
67 3300025298 Ga0209050_1013904 Ga0209050_10139042 706
68 3300025913 Ga0207695_10000758 Ga0207695_1000075826 706
69 3300053156 Ga0500622_0000271 Ga0500622_0000271_17767_19968 706
70 3300014326 Ga0157380_10016450 Ga0157380_100164506 708
71 3300042876 Ga0451577_0087594 Ga0451577_0087594_325_2544 708
72 3300044712 Ga0453684_0010652 Ga0453684_0010652_2550_4748 708
73 3300044712 Ga0453684_0018697 Ga0453684_0018697_6954_9164 708
74 3300003320 rootH2_10017223 rootH2_1001722320 709
75 3300003320 rootH2_10019867 rootH2_100198677 709
76 3300009545 Ga0105237_10001926 Ga0105237_1000192615 709
77 3300025914 Ga0207671_10001539 Ga0207671_1000153915 709
78 3300044673 Ga0453683_0010458 Ga0453683_0010458_584_2806 709
79 3300044712 Ga0453684_0093150 Ga0453684_0093150_1014_3230 709
80 iso_pu_bacteria 2522125168 2522551180 709
81 iso_pu_bacteria 2739367866 2740032608 709
82 3300030742 Ga0316183_1110699 Ga0316183_11106991 710
83 3300032004 Ga0307414_10010269 Ga0307414_100102697 710
84 3300049568 Ga0501031_0026194 Ga0501031_0026194_526_2745 711
85 3300049572 Ga0501036_0001958 Ga0501036_0001958_1675_3894 711
86 3300049573 Ga0501037_0033758 Ga0501037_0033758_38_2257 711
87 3300049574 Ga0501038_0033813 Ga0501038_0033813_1032_3251 711
88 3300049579 Ga0501043_0035269 Ga0501043_0035269_1317_3536 711
89 3300049686 Ga0501257_000656 Ga0501257_000656_962_3178 711
90 3300049822 Ga0501035_0030754 Ga0501035_0030754_2419_4638 711
91 3300049823 Ga0501044_0072703 Ga0501044_0072703_1177_3396 711
92 iso_pu_bacteria 2852627209 2852631642 711
93 3300003320 rootH2_10001886 rootH2_1000188696 712
94 3300003323 rootH1_10060519 rootH1_100605192 712
95 3300005262 Ga0065165_1001546 Ga0065165_100154619 712
96 3300005329 Ga0070683_100004953 Ga0070683_1000049534 712
97 3300005329 Ga0070683_100043016 Ga0070683_1000430162 712
98 3300005340 Ga0070689_100061155 Ga0070689_1000611552 712
99 3300005455 Ga0070663_100004474 Ga0070663_1000044744 712
100 3300005457 Ga0070662_100009312 Ga0070662_1000093122 712
101 3300005563 Ga0068855_100004139 Ga0068855_1000041392 712
102 3300005564 Ga0070664_100000624 Ga0070664_10000062413 712
103 3300005616 Ga0068852_100010949 Ga0068852_1000109492 712
104 3300005843 Ga0068860_100070929 Ga0068860_1000709292 712
105 3300009545 Ga0105237_10021884 Ga0105237_100218843 712
106 3300010375 Ga0105239_10001123 Ga0105239_1000112329 712
107 3300013296 Ga0157374_10000002 Ga0157374_10000002408 712
108 3300013296 Ga0157374_10003511 Ga0157374_100035112 712
109 3300014325 Ga0163163_10001289 Ga0163163_100012899 712
110 3300014969 Ga0157376_10003825 Ga0157376_100038257 712
111 3300026067 Ga0207678_10009117 Ga0207678_100091175 712
112 3300028381 Ga0268264_10054615 Ga0268264_100546152 712
113 3300030521 Ga0307511_10000783 Ga0307511_1000078329 712
114 3300031249 Ga0265339_10004637 Ga0265339_100046379 712
115 3300046460 Ga0495638_0000004 Ga0495638_0000004_589041_591254 712
116 3300046517 Ga0495630_0043137 Ga0495630_0043137_682_2925 712
117 3300049670 Ga0501236_000135 Ga0501236_000135_2791_5004 712
118 3300053087 Ga0500643_000034 Ga0500643_000034_110068_112257 712
119 3300053103 Ga0500555_000001 Ga0500555_000001_713418_715607 712
120 3300053151 Ga0500604_0001563 Ga0500604_0001563_2670_4871 712
121 3300053156 Ga0500622_0000182 Ga0500622_0000182_32140_34341 712
122 iso_pu_bacteria 2721755487 2722728578 712
123 iso_pu_bacteria 2904780799 2904784393 712
124 iso_pu_bacteria 2919177583 2919178983 712
125 3300005288 Ga0065714_10002401 Ga0065714_1000240119 713
126 3300005339 Ga0070660_100068097 Ga0070660_1000680971 713
127 3300005539 Ga0068853_100015166 Ga0068853_1000151663 713
128 3300005548 Ga0070665_100000009 Ga0070665_100000009183 713
129 3300005563 Ga0068855_100000001 Ga0068855_10000000132 713
130 3300005563 Ga0068855_100060026 Ga0068855_1000600263 713
131 3300005577 Ga0068857_100003395 Ga0068857_1000033958 713
132 3300005843 Ga0068860_100000033 Ga0068860_100000033155 713
133 3300005843 Ga0068860_100002835 Ga0068860_1000028357 713
134 3300006038 Ga0075365_10035727 Ga0075365_100357272 713
135 3300009093 Ga0105240_10001019 Ga0105240_1000101918 713
136 3300009174 Ga0105241_10000003 Ga0105241_10000003328 713
137 3300009174 Ga0105241_10007632 Ga0105241_100076323 713
138 3300009174 Ga0105241_10035962 Ga0105241_100359622 713
139 3300009545 Ga0105237_10000860 Ga0105237_1000086016 713
140 3300009545 Ga0105237_10006247 Ga0105237_100062475 713
141 3300009545 Ga0105237_10015047 Ga0105237_100150472 713
142 3300009551 Ga0105238_10091830 Ga0105238_100918302 713
143 3300010375 Ga0105239_10001173 Ga0105239_100011733 713
144 3300013307 Ga0157372_10001318 Ga0157372_1000131819 713
145 3300025911 Ga0207654_10000002 Ga0207654_10000002878 713
146 3300025911 Ga0207654_10004750 Ga0207654_100047503 713
147 3300025913 Ga0207695_10001564 Ga0207695_100015643 713
148 3300025914 Ga0207671_10004036 Ga0207671_100040368 713
149 3300025914 Ga0207671_10005060 Ga0207671_100050603 713
150 3300025914 Ga0207671_10010090 Ga0207671_100100909 713
151 3300025914 Ga0207671_10014952 Ga0207671_100149525 713
152 3300025949 Ga0207667_10000003 Ga0207667_1000000332 713
153 3300025949 Ga0207667_10004657 Ga0207667_100046572 713
154 3300026041 Ga0207639_10021721 Ga0207639_100217212 713
155 3300026116 Ga0207674_10022754 Ga0207674_100227543 713
156 3300028379 Ga0268266_10000014 Ga0268266_10000014487 713
157 3300028381 Ga0268264_10000013 Ga0268264_10000013154 713
158 3300028381 Ga0268264_10005678 Ga0268264_100056787 713
159 3300042876 Ga0451577_0017166 Ga0451577_0017166_1245_3476 713
160 3300044712 Ga0453684_0001421 Ga0453684_0001421_23510_25741 713
161 3300044712 Ga0453684_0005343 Ga0453684_0005343_22365_24602 713
162 3300045051 Ga0451576_0044098 Ga0451576_0044098_1688_3919 713
163 3300046460 Ga0495638_0017827 Ga0495638_0017827_1976_4210 713
164 3300046524 Ga0495648_0009542 Ga0495648_0009542_180_2414 713
165 3300047443 Ga0495687_000118 Ga0495687_000118_2223_4457 713
166 3300050492 nmdc:mga0yw44_28605_c2 nmdc:mga0yw44_28605_c2_394_2586 713
167 3300053092 Ga0500583_0004013 Ga0500583_0004013_956_3190 713
168 3300053139 Ga0500568_0004629 Ga0500568_0004629_1630_3822 713
169 3300053156 Ga0500622_0002256 Ga0500622_0002256_2760_4994 713
170 iso_pu_bacteria 2738543023 2739305453 713
171 iso_pu_bacteria 2857627736 2857630203 713
172 3300005331 Ga0070670_100035717 Ga0070670_1000357172 714
173 3300005367 Ga0070667_100000001 Ga0070667_100000001631 714
174 3300025986 Ga0207658_10000003 Ga0207658_10000003750 714
175 3300031548 Ga0307408_100039722 Ga0307408_1000397222 714
176 3300048920 Ga0496117_0018041 Ga0496117_0018041_3648_5831 714
177 3300048925 Ga0496122_0032039 Ga0496122_0032039_77_2260 714
178 iso_pu_bacteria 2739367651 2739590567 714
179 iso_pu_bacteria 2842722452 2842724873 714
180 iso_pu_bacteria 2849281842 2849284647 714
181 iso_pu_bacteria 2904445276 2904449349 714
182 iso_pu_bacteria 2945997725 2946001852 714
183 3300003320 rootH2_10004334 rootH2_1000433485 715
184 3300005329 Ga0070683_100001663 Ga0070683_10000166313 715
185 3300005563 Ga0068855_100000501 Ga0068855_10000050120 715
186 3300009093 Ga0105240_10002786 Ga0105240_1000278614 715
187 3300009979 Ga0105032_100009 Ga0105032_10000913 715
188 3300025913 Ga0207695_10000390 Ga0207695_1000039056 715
189 3300025944 Ga0207661_10010748 Ga0207661_100107482 715
190 3300025949 Ga0207667_10000754 Ga0207667_1000075410 715
191 3300030742 Ga0316183_1071799 Ga0316183_10717991 715
192 3300030744 Ga0316181_1123581 Ga0316181_112358173 715
193 3300030745 Ga0316182_1306572 Ga0316182_130657213 715
194 3300042531 Ga0450918_000192 Ga0450918_000192_7087_9303 715
195 iso_pu_bacteria 2977232053 2977232858 715
196 3300005458 Ga0070681_10021792 Ga0070681_100217923 716
197 3300005539 Ga0068853_100003277 Ga0068853_1000032777 716
198 3300025912 Ga0207707_10020199 Ga0207707_100201992 716
199 3300026041 Ga0207639_10017741 Ga0207639_100177413 716
200 3300031730 Ga0307516_10005412 Ga0307516_1000541211 716
201 3300047472 Ga0495686_0000016 Ga0495686_0000016_343265_345517 716
202 iso_pu_bacteria 2818991444 2819588324 716
203 3300028786 Ga0307517_10001332 Ga0307517_1000133213 717
204 iso_pu_bacteria 2839989709 2839990822 717
205 iso_pu_bacteria 2910245624 2910245737 717
206 3300005288 Ga0065714_10064548 Ga0065714_100645484 718
207 3300005616 Ga0068852_100007803 Ga0068852_1000078032 718
208 3300009148 Ga0105243_10000008 Ga0105243_10000008244 718
209 3300009545 Ga0105237_10028425 Ga0105237_100284252 718
210 3300013102 Ga0157371_10012231 Ga0157371_100122314 718
211 3300015261 Ga0182006_1000412 Ga0182006_10004122 718
212 3300022467 Ga0224712_10010423 Ga0224712_100104231 718
213 3300025904 Ga0207647_10000282 Ga0207647_100002825 718
214 3300025935 Ga0207709_10000006 Ga0207709_10000006234 718
215 3300026142 Ga0207698_10007520 Ga0207698_100075202 718
216 3300049649 Ga0501198_000192 Ga0501198_000192_2244_4475 718
217 3300049651 Ga0501201_000600 Ga0501201_000600_794_3025 718
218 3300049652 Ga0501202_000553 Ga0501202_000553_138_2369 718
219 3300049661 Ga0501217_000707 Ga0501217_000707_1315_3546 718
220 3300049663 Ga0501223_000467 Ga0501223_000467_2081_4312 718
221 3300049668 Ga0501233_000837 Ga0501233_000837_21_2252 718
222 3300049669 Ga0501235_001204 Ga0501235_001204_2935_5166 718
223 3300049688 Ga0501259_000252 Ga0501259_000252_1679_3910 718
224 3300049689 Ga0501260_000491 Ga0501260_000491_190_2421 718
225 3300049705 Ga0501225_0000661 Ga0501225_0000661_4936_7167 718
226 3300049766 Ga0501269_001377 Ga0501269_001377_467_2698 718
227 3300049851 Ga0501212_001410 Ga0501212_001410_436_2667 718
228 iso_pu_bacteria 2919437846 2919441106 718
229 3300027876 Ga0209974_10002111 Ga0209974_100021115 719
230 3300031731 Ga0307405_10000069 Ga0307405_1000006924 719
231 3300042876 Ga0451577_0000006 Ga0451577_0000006_659233_661434 719
232 3300044658 Ga0466972_0012893 Ga0466972_0012893_561_2858 719
233 3300044673 Ga0453683_0000117 Ga0453683_0000117_66423_68624 719
234 3300044712 Ga0453684_0000037 Ga0453684_0000037_659228_661429 719
235 3300045051 Ga0451576_0047907 Ga0451576_0047907_310_2511 719
236 3300050510 nmdc:mga06r32_30600_c1 nmdc:mga06r32_30600_c1_331_2601 719
237 3300059421 Ga0590071_002541 Ga0590071_002541_2275_4557 719
238 iso_pu_bacteria 2585427687 2586207308 719
239 iso_pu_bacteria 2739367656 2739617211 719
240 iso_pu_bacteria 2954016120 2954018698 719
241 3300003323 rootH1_10084010 rootH1_100840102 720
242 3300005563 Ga0068855_100000652 Ga0068855_10000065237 720
243 3300005614 Ga0068856_100000259 Ga0068856_10000025920 720
244 3300009545 Ga0105237_10001907 Ga0105237_1000190711 720
245 3300010375 Ga0105239_10000013 Ga0105239_1000001342 720
246 3300010375 Ga0105239_10026101 Ga0105239_100261013 720
247 3300013100 Ga0157373_10002056 Ga0157373_1000205610 720
248 3300025913 Ga0207695_10011306 Ga0207695_100113068 720
249 3300025913 Ga0207695_10071633 Ga0207695_100716332 720
250 3300025914 Ga0207671_10001803 Ga0207671_1000180311 720
251 3300025949 Ga0207667_10001001 Ga0207667_1000100113 720
252 3300026078 Ga0207702_10001400 Ga0207702_1000140019 720
253 3300045051 Ga0451576_0041141 Ga0451576_0041141_308_2602 720
254 3300046538 Ga0495609_0003523 Ga0495609_0003523_1502_3700 720
255 3300047320 Ga0495672_0000694 Ga0495672_0000694_21751_23982 720
256 3300003323 rootH1_10085060 rootH1_100850604 721
257 3300002737 JGI25162J39368_1000020 JGI25162J39368_1000020183 722
258 3300003320 rootH2_10059243 rootH2_100592433 722
259 3300005288 Ga0065714_10068187 Ga0065714_100681873 722
260 3300005563 Ga0068855_100049034 Ga0068855_1000490342 722
261 3300006195 Ga0075366_10003891 Ga0075366_100038912 722
262 3300010375 Ga0105239_10000081 Ga0105239_1000008150 722
263 3300010375 Ga0105239_10000259 Ga0105239_1000025955 722
264 3300025233 Ga0209437_100085 Ga0209437_10008526 722
265 3300025949 Ga0207667_10010592 Ga0207667_100105926 722
266 3300028794 Ga0307515_10002415 Ga0307515_1000241522 722
267 3300028800 Ga0265338_10065395 Ga0265338_100653952 722
268 3300033179 Ga0307507_10000217 Ga0307507_1000021725 722
269 3300046492 Ga0495585_0003908 Ga0495585_0003908_1174_3387 722
270 3300046616 Ga0495668_0000003 Ga0495668_0000003_445979_448192 722
271 3300046660 Ga0495625_0005138 Ga0495625_0005138_1194_3407 722
272 3300047472 Ga0495686_0001067 Ga0495686_0001067_29804_32011 722
273 3300053157 Ga0500624_000656 Ga0500624_000656_1347_3545 722

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00982

Glyco_transf_20

Glycosyltransferase family 20

48

516

0.97

PF02358

Trehalose_PPase

Trehalose-phosphatase

550

767

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
5huv-assembly1.cif.gz_A structure of candida albicans trehalose-6-phosphate synthase e341r/e346r in complex with udp-glucose 0.968 3 462
5hut-assembly1.cif.gz_A structure of candida albicans trehalose-6-phosphate synthase in complex with udp-glucose 0.9665 3 463
8fhw-assembly1.cif.gz_A cryo-em structure of cryptococcus neoformans trehalose-6-phosphate synthase homotetramer in complex with uridine diphosphate and glucose-6-phosphate 0.9638 6 461
8fhw-assembly1.cif.gz_A cryo-em structure of cryptococcus neoformans trehalose-6-phosphate synthase homotetramer in complex with uridine diphosphate and glucose-6-phosphate 0.9551 6 461
5hvm-assembly1.cif.gz_B structure of aspergillus fumigatus trehalose-6-phosphate synthase a in complex with udp and validoxylamine a 0.955 3 464
ID Description Score Start End Superfamily
af_I1KSJ3_331_534_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9862 245 445 3.40.50.2000
af_Q9Y119_299_464_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9829 265 428 3.40.50.2000
af_Q54NU9_301_505_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9783 245 444 3.40.50.2000
af_I1KSJ3_331_534_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9671 245 445 3.40.50.2000
af_Q9Y119_299_464_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9655 265 428 3.40.50.2000
ID Description Score Start End GO Terms
AF-A0A287GAY4-F1-model_v4 deleted 0.9859 269 457
AF-A0A7S3EV04-F1-model_v4 Trehalose-6-phosphate synthase 0.9857 226 368 GO:0003825
GO:0004805
GO:0005829
GO:0005992
GO:0070413
AF-A0A4V1SXM2-F1-model_v4 Bifunctional alpha,alpha-trehalose-phosphate synthase (UDP-forming)/trehalose-phosphatase 0.9843 2 462 GO:0003825
GO:0004805
GO:0005829
GO:0005992
GO:0070413
AF-E2LFW7-F1-model_v4 deleted 0.9818 326 462
AF-A0A7S2G6T8-F1-model_v4 Alpha,alpha-trehalose-phosphate synthase (UDP-forming) 0.9815 228 420 GO:0003825
GO:0004805
GO:0005829
GO:0005992
GO:0070413

Feature Viewer

pLDDT pTM Quality
87.46 0.71 High
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Predicted Structure (AlphaFold2)

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