F377787

General Info

Members Datasets Scaffolds Average Seq Length
271 193 262 372

Family's Representative Sequence

Representative Sequence 3300035398|Ga0316574_0024302|Ga0316574_0024302_2081_3397
Length 433
Sequence MTRRPEVATKIPLWRLLLAAAAKAGPRGMRAARAWPRIAPAGAPLAPLTDPGSAMPNFVRCLTVLAMILAAPAVSAATPIPPPPQLEARSWILMDANSGRVITSHDADEPVEPASLTKMMTAYAVFHALEDGKLTLDTNLPVSERAWRAEGSRMFVEVGNRVRVEDLLQGMIVQSGNDASIVLAEGISGTEESFAALMNAYAGRLGMKHSHFENSTGLPGDRHLVTARDMAILARAIIREFPDYYRWYSQREFTWNNITQPNRNGLLDRDPSVDGMKTGHTDAAGYCLVSSAQRDGMRLIAVVMGTSGFKAREDASLALLSYGFNFFETPRVYPRGTELARPRIFGADGGEAAVGLREEFYATVPRGRAGDIAVSLDFKPGLEAPLTASEPVGRVRARLDGKLVAVQDLYPLADVPEGGFLRRGWDALMSIFD

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2596583598 Ralstonia sp. UNCCL144 Isolate Unclassified
3 2599185178 Ralstonia sp. NFACC01 Isolate Rhizoplane
4 2643221621 Achromobacter sp. Root83 Isolate Unclassified
5 2855730933 Achromobacter sp. HZ28 Isolate Nodule
6 2858950400 Achromobacter sp. K91 Isolate Unclassified
7 2881412998 Achromobacter aloeverae AVA-1 Isolate Unclassified
8 2885266251 Ralstonia sp. SET104 Isolate Nodule
9 2900577576 Ralstonia sp. TCR112 Isolate Rhizosphere
10 2928058823 Ralstonia sp. 1138 Isolate Unclassified
11 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
12 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
13 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
14 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
15 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
16 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
17 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
18 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
19 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
20 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
21 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
22 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
23 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
24 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
25 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
26 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
27 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
28 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
29 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
30 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
31 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
32 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
33 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
34 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
35 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
36 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
37 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
38 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
39 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
40 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
41 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
42 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
43 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
44 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
45 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
46 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
47 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
48 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
49 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
50 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
53 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
54 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
55 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
56 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
57 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
58 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
59 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
60 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
61 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
62 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
63 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
64 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
65 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
66 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
74 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
75 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
78 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
79 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
99 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
100 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
101 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
102 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
103 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
104 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
105 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
106 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
107 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
108 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
109 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
110 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
111 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
112 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
113 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
114 3300033529 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
115 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
116 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
117 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
118 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
119 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
120 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
121 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
122 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
123 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
124 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
125 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
126 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
127 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
128 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
129 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
130 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
131 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
132 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
133 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
134 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
135 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
136 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
137 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
138 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
139 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
140 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
141 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
142 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
143 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
144 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
145 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
146 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
147 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
148 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
149 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
150 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
151 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
152 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
153 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
154 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
160 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
165 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
167 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
168 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
169 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
170 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
171 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
172 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
173 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
174 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
175 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
176 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
177 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
178 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
179 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
180 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
181 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
182 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
183 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
184 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
185 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
186 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
187 3300059508 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 53R_CD_T2_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
188 3300059604 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 63R_AD_T2_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
189 3300059630 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 165R_SD_T3_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
190 3300059643 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 13R_AD_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
191 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
192 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
193 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.25
Metatranscriptomes 4.43
Isolates 3.32

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.07
Nodule 0.74
Rhizoplane 1.11
Rhizosphere 80.81
Stem 0
Stem Tuber 0
Unclassified 6.27

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_775527 2162886007 Bacteria 5418
2 JGI24741J21665_1002801 3300001915 Bacteria 4396
3 JGI24740J21852_10000809 3300001979 Bacteria 13762
4 JGI24740J21852_10000818 3300001979 Bacteria 13706
5 JGI25156J39149_1001244 3300002705 Bacteria 11164
6 rootH2_10129442 3300003320 Bacteria 2901
7 rootH2_10142087 3300003320 Bacteria 2413
8 Ga0006562J51391_1065456 3300003578 Bacteria 2020
9 Ga0055538_1002491 3300003751 Bacteria 2669
10 Ga0055539_1000149 3300003752 Bacteria 70006
11 Ga0055533_1004900 3300003756 Bacteria 2287
12 Ga0055532_1000006 3300003758 Bacteria 451244
13 Ga0055525_1000725 3300003759 Bacteria 11523
14 Ga0055527_1000537 3300003760 Bacteria 12762
15 Ga0055535_1000004 3300003761 Bacteria 451244
16 Ga0055542_1000969 3300003762 Bacteria 18690
17 Ga0055529_1000118 3300003763 Bacteria 117058
18 Ga0055541_1001028 3300003841 Bacteria 6509
19 Ga0055541_1002406 3300003841 Bacteria 3750
20 Ga0065704_10070443 3300005289 Bacteria 24644
21 Ga0065707_10142061 3300005295 Bacteria 1759
22 Ga0070658_10163224 3300005327 Bacteria 1869
23 Ga0068869_100026284 3300005334 Bacteria 4051
24 Ga0070689_100188819 3300005340 Bacteria 1677
25 Ga0070661_100000059 3300005344 Bacteria 87006
26 Ga0070675_100019319 3300005354 Bacteria 5428
27 Ga0070673_100223731 3300005364 Bacteria 1630
28 Ga0070659_100000602 3300005366 Bacteria 26408
29 Ga0070714_100000850 3300005435 Bacteria 21651
30 Ga0070694_100137727 3300005444 Bacteria 1770
31 Ga0070663_100000003 3300005455 Bacteria 260492
32 Ga0070704_100025978 3300005549 Bacteria 3863
33 Ga0070664_100000050 3300005564 Bacteria 71168
34 Ga0068857_100005843 3300005577 Bacteria 10508
35 Ga0068854_100000020 3300005578 Bacteria 132163
36 Ga0068856_100000507 3300005614 Bacteria 43131
37 Ga0068852_100038851 3300005616 Bacteria 4004
38 Ga0075364_10021127 3300006051 Bacteria 4100
39 Ga0075428_100086488 3300006844 Bacteria 3419
40 Ga0075433_10003546 3300006852 Bacteria 12045
41 Ga0075433_10181349 3300006852 Bacteria 1874
42 Ga0075434_100000099 3300006871 Bacteria 48394
43 Ga0075435_100018186 3300007076 Bacteria 5337
44 Ga0105240_10088296 3300009093 Bacteria 3794
45 Ga0111539_10008890 3300009094 Bacteria 12717
46 Ga0111539_10039251 3300009094 Bacteria 5708
47 Ga0114129_10014658 3300009147 Bacteria 11167
48 Ga0114129_10229925 3300009147 Bacteria 2498
49 Ga0105241_10165795 3300009174 Bacteria 1820
50 Ga0157371_10000160 3300013102 Bacteria 98616
51 Ga0157370_10000031 3300013104 Bacteria 139879
52 Ga0157369_10056796 3300013105 Bacteria 4223
53 Ga0157372_10000104 3300013307 Bacteria 88067
54 Ga0157375_10357694 3300013308 Bacteria 1626
55 Ga0157380_10004910 3300014326 Bacteria 9321
56 Ga0157380_10031727 3300014326 Bacteria 4058
57 Ga0157380_10039554 3300014326 Bacteria 3668
58 Ga0182008_10014089 3300014497 Bacteria 4193
59 Ga0182006_1001106 3300015261 Bacteria 17189
60 Ga0182006_1060844 3300015261 Bacteria 1425
61 Ga0182007_10010871 3300015262 Bacteria 3572
62 Ga0206349_1338694 3300020075 Bacteria 2068
63 Ga0206351_10022823 3300020077 Bacteria 2839
64 Ga0154015_1111438 3300020610 Bacteria 15056
65 Ga0224712_10045860 3300022467 Bacteria 1675
66 Ga0209784_100006 3300025224 Bacteria 930704
67 Ga0209784_100946 3300025224 Bacteria 5613
68 Ga0209566_100002 3300025225 Bacteria 2614868
69 Ga0209566_100369 3300025225 Bacteria 37555
70 Ga0209566_100916 3300025225 Bacteria 13783
71 Ga0209674_100010 3300025226 Bacteria 1038638
72 Ga0209674_100136 3300025226 Bacteria 113513
73 Ga0209672_100424 3300025228 Bacteria 24735
74 Ga0209147_100015 3300025229 Bacteria 565073
75 Ga0209563_100004 3300025230 Bacteria 1814108
76 Ga0209258_100021 3300025242 Bacteria 565073
77 Ga0209646_1000055 3300025246 Bacteria 271793
78 Ga0209026_1001295 3300025250 Bacteria 11325
79 Ga0209677_100007 3300025253 Bacteria 1021332
80 Ga0209677_103774 3300025253 Bacteria 4714
81 Ga0209148_1000151 3300025254 Bacteria 156553
82 Ga0209148_1005219 3300025254 Bacteria 3020
83 Ga0209759_1004102 3300025256 Bacteria 5566
84 Ga0209455_1000028 3300025272 Bacteria 565073
85 Ga0209050_1021998 3300025298 Bacteria 2301
86 Ga0207705_10235060 3300025909 Bacteria 1395
87 Ga0207695_10002616 3300025913 Bacteria 26349
88 Ga0207649_10000258 3300025920 Bacteria 42222
89 Ga0207681_10273932 3300025923 Bacteria 1326
90 Ga0207659_10080213 3300025926 Bacteria 2410
91 Ga0207664_10008706 3300025929 Bacteria 7094
92 Ga0207690_10004327 3300025932 Bacteria 8386
93 Ga0207670_10158328 3300025936 Bacteria 1688
94 Ga0207669_10164454 3300025937 Bacteria 1572
95 Ga0207689_10039909 3300025942 Bacteria 3886
96 Ga0207679_10000007 3300025945 Bacteria 460140
97 Ga0207640_10000194 3300025981 Bacteria 43410
98 Ga0207678_10000029 3300026067 Bacteria 112885
99 Ga0207702_10000018 3300026078 Bacteria 212617
100 Ga0207648_10114332 3300026089 Bacteria 2371
101 Ga0207674_10009098 3300026116 Bacteria 11398
102 Ga0207698_10023668 3300026142 Bacteria 4295
103 Ga0209998_10009219 3300027717 Bacteria 2047
104 Ga0265334_10000008 3300028573 Bacteria 200602
105 Ga0265334_10000513 3300028573 Bacteria 19853
106 Ga0265338_10025323 3300028800 Bacteria 6027
107 Ga0265324_10031653 3300029957 Bacteria 1851
108 Ga0265316_10097345 3300031344 Bacteria 2240
109 Ga0265313_10000076 3300031595 Bacteria 96542
110 Ga0316575_10023535 3300031665 Bacteria 2381
111 Ga0316579_10000484 3300031691 Bacteria 12944
112 Ga0316576_10000969 3300031727 Bacteria 14721
113 Ga0316576_10001630 3300031727 Bacteria 12265
114 Ga0316576_10005928 3300031727 Bacteria 7542
115 Ga0316578_10035387 3300031728 Bacteria 2871
116 Ga0316578_10113701 3300031728 Bacteria 1626
117 Ga0307406_10051295 3300031901 Bacteria 2619
118 Ga0307412_10173936 3300031911 Bacteria 1612
119 Ga0307415_100025056 3300032126 Bacteria 3737
120 Ga0316583_10007675 3300032133 Bacteria 3888
121 Ga0316583_10043788 3300032133 Bacteria 1582
122 Ga0316585_10000109 3300032137 Bacteria 15064
123 Ga0316580_10015056 3300032139 Bacteria 2363
124 Ga0316592_1002427 3300033524 Bacteria 3221
125 Ga0316587_1012124 3300033529 Bacteria 1399
126 Ga0316596_1000186 3300033541 Bacteria 8964
127 Ga0316574_0005673 3300035398 Bacteria 6676
128 Ga0316574_0024302 3300035398 Bacteria 3625
129 Ga0373927_0000001 3300035695 Bacteria 1082160
130 Ga0316582_0077174 3300036647 Bacteria 2168
131 Ga0316584_0005762 3300036712 Bacteria 8348
132 Ga0316584_0074248 3300036712 Bacteria 2550
133 Ga0316584_0094129 3300036712 Bacteria 2243
134 Ga0395900_0054524 3300037418 Bacteria 4116
135 Ga0316581_0026192 3300037588 Bacteria 1738
136 Ga0395901_0029156 3300038443 Bacteria 5680
137 Ga0400483_075161 3300039062 Bacteria 103046
138 Ga0400483_098478 3300039062 Bacteria 11916
139 Ga0400487_49068 3300039110 Bacteria 27556
140 Ga0450923_003093 3300042125 Bacteria 2469
141 Ga0450894_008783 3300042131 Bacteria 1307
142 Ga0450896_000139 3300042133 Bacteria 5609
143 Ga0450898_000273 3300042134 Bacteria 5768
144 Ga0439446_0000497 3300042156 Bacteria 7860
145 Ga0439446_0004389 3300042156 Bacteria 3577
146 Ga0450908_000407 3300042184 Bacteria 8271
147 Ga0439434_0026465 3300042435 Bacteria 1752
148 Ga0439434_0032676 3300042435 Bacteria 1584
149 Ga0439435_0001148 3300042436 Bacteria 4743
150 Ga0439444_0000332 3300042437 Bacteria 4960
151 Ga0439460_0016120 3300042461 Bacteria 1987
152 Ga0450918_000482 3300042531 Bacteria 8508
153 Ga0451577_0015116 3300042876 Bacteria 7182
154 Ga0466972_0012878 3300044658 Bacteria 4199
155 Ga0466965_0012208 3300044683 Bacteria 4037
156 Ga0466961_0008820 3300044693 Bacteria 6431
157 Ga0466964_0008047 3300044706 Bacteria 3952
158 Ga0453684_0123285 3300044712 Unclassified 3125
159 Ga0466968_0058666 3300044735 Bacteria 1656
160 Ga0466970_0016919 3300044765 Bacteria 3764
161 Ga0466957_0020080 3300044842 Bacteria 3932
162 Ga0466959_0024356 3300045049 Bacteria 4483
163 Ga0451576_0000247 3300045051 Bacteria 132668
164 Ga0451576_0068791 3300045051 Bacteria 3684
165 Ga0466967_0045698 3300045976 Bacteria 3806
166 Ga0495607_0011856 3300046501 Bacteria 5777
167 Ga0495630_0300981 3300046517 Bacteria 1225
168 Ga0495597_0093617 3300046542 Bacteria 1273
169 Ga0496103_0059164 3300048906 Bacteria 2381
170 Ga0496106_0040929 3300048909 Bacteria 3472
171 Ga0496122_0000504 3300048925 Bacteria 80683
172 Ga0496122_0177679 3300048925 Bacteria 1274
173 Ga0501031_0013251 3300049568 Bacteria 5381
174 Ga0501033_0081828 3300049570 Bacteria 2368
175 Ga0501036_0013893 3300049572 Bacteria 6696
176 Ga0501036_0043934 3300049572 Bacteria 3784
177 Ga0501037_0029165 3300049573 Bacteria 4076
178 Ga0501038_0030470 3300049574 Bacteria 4774
179 Ga0501039_0025199 3300049575 Bacteria 4569
180 Ga0501039_0033156 3300049575 Bacteria 3984
181 Ga0501039_0089244 3300049575 Bacteria 2402
182 Ga0501039_0246445 3300049575 Bacteria 1405
183 Ga0501040_0007859 3300049576 Bacteria 6911
184 Ga0501040_0039153 3300049576 Bacteria 3224
185 Ga0501040_0121868 3300049576 Bacteria 1830
186 Ga0501040_0321242 3300049576 Bacteria 1107
187 Ga0501041_0002091 3300049577 Bacteria 11238
188 Ga0501041_0004039 3300049577 Bacteria 8475
189 Ga0501041_0076135 3300049577 Bacteria 2064
190 Ga0501042_0003161 3300049578 Bacteria 10269
191 Ga0501042_0049912 3300049578 Bacteria 2985
192 Ga0501043_0041457 3300049579 Bacteria 3617
193 Ga0501046_0179752 3300049580 Bacteria 1583
194 Ga0501047_0075289 3300049581 Bacteria 3248
195 Ga0501048_0017674 3300049582 Bacteria 5250
196 Ga0501048_0052499 3300049582 Bacteria 2901
197 Ga0501067_0004298 3300049583 Bacteria 7850
198 Ga0501068_0011709 3300049584 Bacteria 4959
199 Ga0501068_0056262 3300049584 Bacteria 2385
200 Ga0501068_0070899 3300049584 Bacteria 2127
201 Ga0501071_0009601 3300049587 Bacteria 6455
202 Ga0501071_0017879 3300049587 Bacteria 4900
203 Ga0501071_0018662 3300049587 Bacteria 4807
204 Ga0501071_0070800 3300049587 Bacteria 2541
205 Ga0501071_0237429 3300049587 Bacteria 1374
206 Ga0501072_0018856 3300049588 Bacteria 5323
207 Ga0501072_0066638 3300049588 Bacteria 2840
208 Ga0501072_0122914 3300049588 Bacteria 2068
209 Ga0501073_0002437 3300049589 Bacteria 13899
210 Ga0501074_0071429 3300049590 Bacteria 2495
211 Ga0501075_0001881 3300049591 Bacteria 13851
212 Ga0501075_0002909 3300049591 Bacteria 11490
213 Ga0501075_0011267 3300049591 Bacteria 6326
214 Ga0501075_0053524 3300049591 Bacteria 3036
215 Ga0501075_0085316 3300049591 Bacteria 2392
216 Ga0501076_0001539 3300049592 Bacteria 15442
217 Ga0501076_0001641 3300049592 Bacteria 15091
218 Ga0501076_0125768 3300049592 Bacteria 2077
219 Ga0501076_0151882 3300049592 Bacteria 1884
220 Ga0501077_0003038 3300049593 Bacteria 10068
221 Ga0501077_0004313 3300049593 Bacteria 8612
222 Ga0501077_0094781 3300049593 Bacteria 1892
223 Ga0501079_0000473 3300049741 Bacteria 26450
224 Ga0501079_0001869 3300049741 Bacteria 15100
225 Ga0501079_0059049 3300049741 Bacteria 2959
226 Ga0501079_0120012 3300049741 Bacteria 2044
227 Ga0501079_0170843 3300049741 Bacteria 1695
228 Ga0501080_0013820 3300049742 Bacteria 7432
229 Ga0501080_0076711 3300049742 Bacteria 3108
230 Ga0501080_0102123 3300049742 Bacteria 2660
231 Ga0501081_0000824 3300049743 Bacteria 18337
232 Ga0501081_0002221 3300049743 Bacteria 12214
233 Ga0501081_0021923 3300049743 Bacteria 4268
234 Ga0501035_0047308 3300049822 Bacteria 3862
235 Ga0501035_0051478 3300049822 Bacteria 3687
236 Ga0501035_0085452 3300049822 Bacteria 2781
237 Ga0501045_0009082 3300049824 Bacteria 6944
238 Ga0501045_0155938 3300049824 Bacteria 1699
239 Ga0501045_0190529 3300049824 Bacteria 1528
240 nmdc:mga05p37_304144_c1 3300050507 Bacteria 1893
241 nmdc:mga08y16_52869_c1 3300050511 Bacteria 4248
242 nmdc:mga0n895_2337_c1 3300050512 Bacteria 14779
243 nmdc:mga0a205_15703_c1 3300050515 Bacteria 7077
244 nmdc:mga0a205_177614_c1 3300050515 Bacteria 2024
245 Ga0500559_0036953 3300053136 Bacteria 2115
246 Ga0501084_0008334 3300054114 Bacteria 8554
247 Ga0501084_0077205 3300054114 Bacteria 2792
248 Ga0587088_001302 3300059508 Bacteria 2546
249 Ga0587098_000787 3300059604 Bacteria 2151
250 Ga0587128_005661 3300059630 Bacteria 1505
251 Ga0587072_001911 3300059643 Bacteria 2696
252 Ga0501082_0004594 3300060353 Bacteria 12060
253 Ga0501082_0009686 3300060353 Bacteria 8296
254 Ga0501082_0014891 3300060353 Bacteria 6699
255 Ga0501082_0040078 3300060353 Bacteria 4041
256 Ga0501082_0064424 3300060353 Bacteria 3157
257 Ga0501082_0112482 3300060353 Bacteria 2357
258 Ga0466962_0006891 3300061719 Bacteria 5449
259 Ga0530510_0001803 3300061734 Bacteria 14606
260 Ga0530510_0010542 3300061734 Bacteria 6479
261 Ga0530510_0075803 3300061734 Bacteria 2443
262 Ga0530510_0227684 3300061734 Bacteria 1386

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300015262 Ga0182007_10010871 Ga0182007_100108715 342
2 3300046517 Ga0495630_0300981 Ga0495630_0300981_19_1155 342
3 3300049570 Ga0501033_0081828 Ga0501033_0081828_645_1784 347
4 3300049572 Ga0501036_0013893 Ga0501036_0013893_618_1757 347
5 3300049573 Ga0501037_0029165 Ga0501037_0029165_2071_3210 347
6 3300049574 Ga0501038_0030470 Ga0501038_0030470_2820_3959 347
7 3300049575 Ga0501039_0089244 Ga0501039_0089244_165_1304 347
8 3300049576 Ga0501040_0007859 Ga0501040_0007859_5245_6384 347
9 3300049577 Ga0501041_0004039 Ga0501041_0004039_2947_4086 347
10 3300049578 Ga0501042_0049912 Ga0501042_0049912_867_2006 347
11 3300049579 Ga0501043_0041457 Ga0501043_0041457_2314_3453 347
12 3300049582 Ga0501048_0052499 Ga0501048_0052499_821_1960 347
13 3300049584 Ga0501068_0070899 Ga0501068_0070899_103_1242 347
14 3300049587 Ga0501071_0018662 Ga0501071_0018662_2785_3924 347
15 3300049588 Ga0501072_0066638 Ga0501072_0066638_1095_2234 347
16 3300049590 Ga0501074_0071429 Ga0501074_0071429_321_1460 347
17 3300049591 Ga0501075_0001881 Ga0501075_0001881_9638_10777 347
18 3300049592 Ga0501076_0001641 Ga0501076_0001641_2519_3658 347
19 3300049593 Ga0501077_0004313 Ga0501077_0004313_6554_7693 347
20 3300049741 Ga0501079_0000473 Ga0501079_0000473_10983_12122 347
21 3300049742 Ga0501080_0102123 Ga0501080_0102123_917_2056 347
22 3300049743 Ga0501081_0002221 Ga0501081_0002221_9020_10159 347
23 3300049822 Ga0501035_0051478 Ga0501035_0051478_843_1982 347
24 3300049824 Ga0501045_0009082 Ga0501045_0009082_912_2051 347
25 3300054114 Ga0501084_0077205 Ga0501084_0077205_751_1890 347
26 3300060353 Ga0501082_0112482 Ga0501082_0112482_867_2006 347
27 3300061734 Ga0530510_0001803 Ga0530510_0001803_5031_6170 347
28 3300027717 Ga0209998_10009219 Ga0209998_100092192 349
29 3300031901 Ga0307406_10051295 Ga0307406_100512952 349
30 3300049587 Ga0501071_0070800 Ga0501071_0070800_253_1392 349
31 3300049591 Ga0501075_0011267 Ga0501075_0011267_1806_2945 349
32 3300049593 Ga0501077_0094781 Ga0501077_0094781_181_1320 349
33 3300049822 Ga0501035_0047308 Ga0501035_0047308_35_1174 349
34 3300060353 Ga0501082_0009686 Ga0501082_0009686_4902_6041 349
35 3300061734 Ga0530510_0227684 Ga0530510_0227684_204_1343 349
36 3300031911 Ga0307412_10173936 Ga0307412_101739362 350
37 3300032126 Ga0307415_100025056 Ga0307415_1000250562 350
38 3300042133 Ga0450896_000139 Ga0450896_000139_2801_3931 350
39 3300042436 Ga0439435_0001148 Ga0439435_0001148_3331_4461 350
40 3300042437 Ga0439444_0000332 Ga0439444_0000332_2171_3301 350
41 3300042461 Ga0439460_0016120 Ga0439460_0016120_298_1428 350
42 3300042131 Ga0450894_008783 Ga0450894_008783_18_1148 352
43 3300003578 Ga0006562J51391_1065456 Ga0006562J51391_10654561 353
44 3300007076 Ga0075435_100018186 Ga0075435_1000181866 353
45 3300049583 Ga0501067_0004298 Ga0501067_0004298_6615_7739 353
46 3300049584 Ga0501068_0011709 Ga0501068_0011709_498_1628 353
47 3300049584 Ga0501068_0056262 Ga0501068_0056262_452_1576 353
48 3300049589 Ga0501073_0002437 Ga0501073_0002437_75_1199 353
49 3300049593 Ga0501077_0003038 Ga0501077_0003038_2382_3506 353
50 3300049742 Ga0501080_0013820 Ga0501080_0013820_3502_4626 353
51 3300050511 nmdc:mga08y16_52869_c1 nmdc:mga08y16_52869_c1_33_1163 353
52 3300050515 nmdc:mga0a205_15703_c1 nmdc:mga0a205_15703_c1_36_1166 353
53 3300060353 Ga0501082_0004594 Ga0501082_0004594_7528_8652 353
54 3300049575 Ga0501039_0246445 Ga0501039_0246445_22_1164 354
55 3300049576 Ga0501040_0039153 Ga0501040_0039153_1296_2432 354
56 3300049576 Ga0501040_0321242 Ga0501040_0321242_31_1095 354
57 3300049587 Ga0501071_0009601 Ga0501071_0009601_1737_2867 354
58 3300049592 Ga0501076_0125768 Ga0501076_0125768_134_1264 354
59 3300049741 Ga0501079_0170843 Ga0501079_0170843_339_1481 354
60 3300049824 Ga0501045_0155938 Ga0501045_0155938_40_1176 354
61 3300005295 Ga0065707_10142061 Ga0065707_101420612 355
62 3300005354 Ga0070675_100019319 Ga0070675_1000193192 355
63 3300005364 Ga0070673_100223731 Ga0070673_1002237312 355
64 3300014326 Ga0157380_10004910 Ga0157380_1000491010 355
65 3300014326 Ga0157380_10039554 Ga0157380_100395544 355
66 3300025923 Ga0207681_10273932 Ga0207681_102739322 355
67 3300025926 Ga0207659_10080213 Ga0207659_100802132 355
68 3300048925 Ga0496122_0177679 Ga0496122_0177679_144_1229 355
69 3300049580 Ga0501046_0179752 Ga0501046_0179752_312_1472 355
70 3300002705 JGI25156J39149_1001244 JGI25156J39149_10012444 356
71 3300003762 Ga0055542_1000969 Ga0055542_10009694 356
72 3300003841 Ga0055541_1001028 Ga0055541_10010287 356
73 3300005334 Ga0068869_100026284 Ga0068869_1000262844 356
74 3300005549 Ga0070704_100025978 Ga0070704_1000259784 356
75 3300006844 Ga0075428_100086488 Ga0075428_1000864882 356
76 3300006852 Ga0075433_10003546 Ga0075433_100035468 356
77 3300006871 Ga0075434_100000099 Ga0075434_10000009940 356
78 3300009094 Ga0111539_10008890 Ga0111539_100088904 356
79 3300009094 Ga0111539_10039251 Ga0111539_100392513 356
80 3300009147 Ga0114129_10229925 Ga0114129_102299252 356
81 3300014326 Ga0157380_10031727 Ga0157380_100317273 356
82 3300025224 Ga0209784_100946 Ga0209784_1009465 356
83 3300025225 Ga0209566_100369 Ga0209566_10036920 356
84 3300025226 Ga0209674_100136 Ga0209674_10013658 356
85 3300025246 Ga0209646_1000055 Ga0209646_100005563 356
86 3300025250 Ga0209026_1001295 Ga0209026_10012956 356
87 3300025253 Ga0209677_103774 Ga0209677_1037744 356
88 3300025254 Ga0209148_1000151 Ga0209148_100015149 356
89 3300025937 Ga0207669_10164454 Ga0207669_101644542 356
90 3300025942 Ga0207689_10039909 Ga0207689_100399094 356
91 3300026089 Ga0207648_10114332 Ga0207648_101143322 356
92 3300050507 nmdc:mga05p37_304144_c1 nmdc:mga05p37_304144_c1_334_1464 356
93 3300050512 nmdc:mga0n895_2337_c1 nmdc:mga0n895_2337_c1_6733_7863 356
94 3300025298 Ga0209050_1021998 Ga0209050_10219982 357
95 3300042156 Ga0439446_0004389 Ga0439446_0004389_1280_2440 357
96 3300042435 Ga0439434_0032676 Ga0439434_0032676_105_1265 357
97 3300060353 Ga0501082_0064424 Ga0501082_0064424_1745_2875 357
98 3300005444 Ga0070694_100137727 Ga0070694_1001377272 358
99 3300049575 Ga0501039_0033156 Ga0501039_0033156_277_1407 358
100 3300049576 Ga0501040_0121868 Ga0501040_0121868_173_1303 358
101 3300049577 Ga0501041_0002091 Ga0501041_0002091_1879_3009 358
102 3300049578 Ga0501042_0003161 Ga0501042_0003161_2310_3440 358
103 3300049588 Ga0501072_0122914 Ga0501072_0122914_422_1552 358
104 3300049591 Ga0501075_0002909 Ga0501075_0002909_8222_9352 358
105 3300049741 Ga0501079_0001869 Ga0501079_0001869_11517_12647 358
106 3300049742 Ga0501080_0076711 Ga0501080_0076711_179_1309 358
107 3300049743 Ga0501081_0000824 Ga0501081_0000824_12896_14026 358
108 3300054114 Ga0501084_0008334 Ga0501084_0008334_7026_8156 358
109 3300060353 Ga0501082_0014891 Ga0501082_0014891_3130_4260 358
110 3300061734 Ga0530510_0010542 Ga0530510_0010542_5040_6170 358
111 3300003320 rootH2_10129442 rootH2_101294423 359
112 3300005366 Ga0070659_100000602 Ga0070659_10000060223 359
113 3300014497 Ga0182008_10014089 Ga0182008_100140894 359
114 3300015261 Ga0182006_1060844 Ga0182006_10608441 359
115 3300025932 Ga0207690_10004327 Ga0207690_100043276 359
116 3300031344 Ga0265316_10097345 Ga0265316_100973451 359
117 3300001915 JGI24741J21665_1002801 JGI24741J21665_10028014 360
118 3300001979 JGI24740J21852_10000818 JGI24740J21852_1000081811 360
119 3300003751 Ga0055538_1002491 Ga0055538_10024913 360
120 3300003752 Ga0055539_1000149 Ga0055539_100014928 360
121 3300003756 Ga0055533_1004900 Ga0055533_10049001 360
122 3300003758 Ga0055532_1000006 Ga0055532_1000006328 360
123 3300003759 Ga0055525_1000725 Ga0055525_10007256 360
124 3300003760 Ga0055527_1000537 Ga0055527_100053710 360
125 3300003761 Ga0055535_1000004 Ga0055535_1000004328 360
126 3300003763 Ga0055529_1000118 Ga0055529_100011870 360
127 3300003841 Ga0055541_1002406 Ga0055541_10024065 360
128 3300005344 Ga0070661_100000059 Ga0070661_10000005926 360
129 3300005455 Ga0070663_100000003 Ga0070663_10000000365 360
130 3300005564 Ga0070664_100000050 Ga0070664_1000000509 360
131 3300005577 Ga0068857_100005843 Ga0068857_1000058436 360
132 3300005578 Ga0068854_100000020 Ga0068854_100000020145 360
133 3300005614 Ga0068856_100000507 Ga0068856_10000050728 360
134 3300005616 Ga0068852_100038851 Ga0068852_1000388512 360
135 3300009093 Ga0105240_10088296 Ga0105240_100882961 360
136 3300009174 Ga0105241_10165795 Ga0105241_101657952 360
137 3300013102 Ga0157371_10000160 Ga0157371_1000016042 360
138 3300013104 Ga0157370_10000031 Ga0157370_10000031119 360
139 3300013105 Ga0157369_10056796 Ga0157369_100567963 360
140 3300015261 Ga0182006_1001106 Ga0182006_100110612 360
141 3300020075 Ga0206349_1338694 Ga0206349_13386942 360
142 3300020077 Ga0206351_10022823 Ga0206351_100228233 360
143 3300020610 Ga0154015_1111438 Ga0154015_11114389 360
144 3300022467 Ga0224712_10045860 Ga0224712_100458601 360
145 3300025224 Ga0209784_100006 Ga0209784_100006727 360
146 3300025225 Ga0209566_100002 Ga0209566_100002727 360
147 3300025225 Ga0209566_100916 Ga0209566_1009166 360
148 3300025226 Ga0209674_100010 Ga0209674_100010409 360
149 3300025228 Ga0209672_100424 Ga0209672_10042417 360
150 3300025229 Ga0209147_100015 Ga0209147_100015222 360
151 3300025230 Ga0209563_100004 Ga0209563_100004138 360
152 3300025242 Ga0209258_100021 Ga0209258_100021222 360
153 3300025253 Ga0209677_100007 Ga0209677_100007727 360
154 3300025254 Ga0209148_1005219 Ga0209148_10052193 360
155 3300025256 Ga0209759_1004102 Ga0209759_10041025 360
156 3300025272 Ga0209455_1000028 Ga0209455_1000028222 360
157 3300025913 Ga0207695_10002616 Ga0207695_1000261623 360
158 3300025920 Ga0207649_10000258 Ga0207649_1000025828 360
159 3300025945 Ga0207679_10000007 Ga0207679_10000007222 360
160 3300025981 Ga0207640_10000194 Ga0207640_1000019416 360
161 3300026067 Ga0207678_10000029 Ga0207678_1000002955 360
162 3300026078 Ga0207702_10000018 Ga0207702_10000018165 360
163 3300026116 Ga0207674_10009098 Ga0207674_100090986 360
164 3300026142 Ga0207698_10023668 Ga0207698_100236684 360
165 3300037418 Ga0395900_0054524 Ga0395900_0054524_476_1678 360
166 3300042125 Ga0450923_003093 Ga0450923_003093_978_2108 360
167 3300042184 Ga0450908_000407 Ga0450908_000407_2149_3279 360
168 3300042531 Ga0450918_000482 Ga0450918_000482_392_1522 360
169 3300044658 Ga0466972_0012878 Ga0466972_0012878_2746_3939 360
170 3300044683 Ga0466965_0012208 Ga0466965_0012208_903_2096 360
171 3300044693 Ga0466961_0008820 Ga0466961_0008820_2152_3345 360
172 3300044706 Ga0466964_0008047 Ga0466964_0008047_614_1807 360
173 3300044735 Ga0466968_0058666 Ga0466968_0058666_203_1396 360
174 3300044765 Ga0466970_0016919 Ga0466970_0016919_1911_3104 360
175 3300044842 Ga0466957_0020080 Ga0466957_0020080_880_2073 360
176 3300045049 Ga0466959_0024356 Ga0466959_0024356_1203_2396 360
177 3300045976 Ga0466967_0045698 Ga0466967_0045698_1968_3161 360
178 3300059508 Ga0587088_001302 Ga0587088_001302_332_1534 360
179 3300059604 Ga0587098_000787 Ga0587098_000787_311_1513 360
180 3300059643 Ga0587072_001911 Ga0587072_001911_336_1538 360
181 3300061719 Ga0466962_0006891 Ga0466962_0006891_1625_2818 360
182 3300001979 JGI24740J21852_10000809 JGI24740J21852_100008094 361
183 3300042134 Ga0450898_000273 Ga0450898_000273_3043_4173 362
184 3300042156 Ga0439446_0000497 Ga0439446_0000497_5268_6398 362
185 3300013307 Ga0157372_10000104 Ga0157372_1000010427 364
186 3300042876 Ga0451577_0015116 Ga0451577_0015116_1523_2770 364
187 3300049591 Ga0501075_0085316 Ga0501075_0085316_988_2190 365
188 3300049592 Ga0501076_0151882 Ga0501076_0151882_538_1740 365
189 3300006051 Ga0075364_10021127 Ga0075364_100211273 366
190 3300049741 Ga0501079_0120012 Ga0501079_0120012_652_1782 366
191 3300028573 Ga0265334_10000513 Ga0265334_100005136 367
192 3300029957 Ga0265324_10031653 Ga0265324_100316532 367
193 3300059630 Ga0587128_005661 Ga0587128_005661_243_1445 367
194 iso_pu_bacteria 2596583598 2597031325 367
195 iso_pu_bacteria 2599185178 2599447203 367
196 iso_pu_bacteria 2885266251 2885270131 367
197 iso_pu_bacteria 2900577576 2900577828 367
198 iso_pu_bacteria 2928058823 2928061093 367
199 3300005327 Ga0070658_10163224 Ga0070658_101632242 368
200 3300025909 Ga0207705_10235060 Ga0207705_102350601 368
201 3300038443 Ga0395901_0029156 Ga0395901_0029156_553_1716 368
202 3300049581 Ga0501047_0075289 Ga0501047_0075289_53_1201 368
203 3300046542 Ga0495597_0093617 Ga0495597_0093617_52_1209 369
204 3300048925 Ga0496122_0000504 Ga0496122_0000504_1779_2936 369
205 3300049741 Ga0501079_0059049 Ga0501079_0059049_1599_2738 369
206 3300053136 Ga0500559_0036953 Ga0500559_0036953_916_2073 369
207 3300005340 Ga0070689_100188819 Ga0070689_1001888191 370
208 3300006852 Ga0075433_10181349 Ga0075433_101813492 370
209 3300009147 Ga0114129_10014658 Ga0114129_100146584 370
210 3300013308 Ga0157375_10357694 Ga0157375_103576941 370
211 3300025936 Ga0207670_10158328 Ga0207670_101583282 370
212 3300031691 Ga0316579_10000484 Ga0316579_100004845 370
213 3300031727 Ga0316576_10000969 Ga0316576_100009699 370
214 3300031727 Ga0316576_10001630 Ga0316576_100016305 370
215 3300032133 Ga0316583_10007675 Ga0316583_100076752 370
216 3300032137 Ga0316585_10000109 Ga0316585_1000010913 370
217 3300032139 Ga0316580_10015056 Ga0316580_100150563 370
218 3300033524 Ga0316592_1002427 Ga0316592_10024272 370
219 3300033529 Ga0316587_1012124 Ga0316587_10121241 370
220 3300033541 Ga0316596_1000186 Ga0316596_10001869 370
221 3300035398 Ga0316574_0005673 Ga0316574_0005673_812_1969 370
222 3300036712 Ga0316584_0005762 Ga0316584_0005762_3397_4554 370
223 3300036712 Ga0316584_0074248 Ga0316584_0074248_81_1244 370
224 3300036712 Ga0316584_0094129 Ga0316584_0094129_585_1742 370
225 3300037588 Ga0316581_0026192 Ga0316581_0026192_214_1371 370
226 3300039062 Ga0400483_075161 Ga0400483_075161_10328_11518 370
227 3300042435 Ga0439434_0026465 Ga0439434_0026465_240_1436 370
228 3300044712 Ga0453684_0123285 Ga0453684_0123285_1671_2867 370
229 3300045051 Ga0451576_0000247 Ga0451576_0000247_65908_67074 370
230 3300045051 Ga0451576_0068791 Ga0451576_0068791_1651_2847 370
231 3300048906 Ga0496103_0059164 Ga0496103_0059164_1149_2291 370
232 3300048909 Ga0496106_0040929 Ga0496106_0040929_1273_2415 370
233 3300049587 Ga0501071_0237429 Ga0501071_0237429_217_1341 370
234 3300050515 nmdc:mga0a205_177614_c1 nmdc:mga0a205_177614_c1_713_1855 370
235 3300003320 rootH2_10142087 rootH2_101420871 371
236 3300032133 Ga0316583_10043788 Ga0316583_100437882 371
237 3300046501 Ga0495607_0011856 Ga0495607_0011856_1273_2448 371
238 3300005435 Ga0070714_100000850 Ga0070714_1000008502 372
239 3300025929 Ga0207664_10008706 Ga0207664_100087063 372
240 3300028573 Ga0265334_10000008 Ga0265334_10000008157 372
241 3300028800 Ga0265338_10025323 Ga0265338_100253237 372
242 3300031595 Ga0265313_10000076 Ga0265313_1000007642 372
243 3300035695 Ga0373927_0000001 Ga0373927_0000001_997281_998420 372
244 3300031665 Ga0316575_10023535 Ga0316575_100235352 373
245 3300031727 Ga0316576_10005928 Ga0316576_100059282 373
246 3300031728 Ga0316578_10035387 Ga0316578_100353872 373
247 3300031728 Ga0316578_10113701 Ga0316578_101137012 373
248 3300035398 Ga0316574_0024302 Ga0316574_0024302_2081_3397 373
249 3300036647 Ga0316582_0077174 Ga0316582_0077174_616_1932 373
250 3300039062 Ga0400483_098478 Ga0400483_098478_7423_8622 373
251 3300039110 Ga0400487_49068 Ga0400487_49068_14445_15593 373
252 iso_pu_bacteria 2643221621 2644123256 373
253 iso_pu_bacteria 2858950400 2858954213 373
254 iso_pu_bacteria 2881412998 2881416912 374
255 iso_pu_bacteria 2855730933 2855735430 375
256 2162886007 SwRhRL2b_contig_775527 SwRhRL2b_0042.00000840 376
257 3300005289 Ga0065704_10070443 Ga0065704_1007044320 376
258 3300049568 Ga0501031_0013251 Ga0501031_0013251_2877_4007 376
259 3300049572 Ga0501036_0043934 Ga0501036_0043934_921_2051 376
260 3300049575 Ga0501039_0025199 Ga0501039_0025199_2845_3975 376
261 3300049577 Ga0501041_0076135 Ga0501041_0076135_572_1702 376
262 3300049582 Ga0501048_0017674 Ga0501048_0017674_1160_2290 376
263 3300049587 Ga0501071_0017879 Ga0501071_0017879_1213_2343 376
264 3300049588 Ga0501072_0018856 Ga0501072_0018856_2493_3623 376
265 3300049591 Ga0501075_0053524 Ga0501075_0053524_389_1519 376
266 3300049592 Ga0501076_0001539 Ga0501076_0001539_13081_14211 376
267 3300049743 Ga0501081_0021923 Ga0501081_0021923_1735_2865 376
268 3300049822 Ga0501035_0085452 Ga0501035_0085452_696_1826 376
269 3300049824 Ga0501045_0190529 Ga0501045_0190529_196_1326 376
270 3300060353 Ga0501082_0040078 Ga0501082_0040078_1828_2958 376
271 3300061734 Ga0530510_0075803 Ga0530510_0075803_380_1510 376

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07943

PBP5_C

Penicillin-binding protein 5, C-terminal domain

327

417

0.99

PF00768

Peptidase_S11

D-alanyl-D-alanine carboxypeptidase

75

308

0.98

PF13354

Beta-lactamase2

Beta-lactamase enzyme family

90

273

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
5tr7-assembly2.cif.gz_B crystal structure of a putative d-alanyl-d-alanine carboxypeptidase from vibrio cholerae o1 biovar eltor str. n16961 0.9775 27 268
4k91-assembly2.cif.gz_B crystal structure of penicillin-binding protein 5 (pbp5) from pseudomonas aeruginosa in apo state 0.9549 21 362
4k91-assembly2.cif.gz_B crystal structure of penicillin-binding protein 5 (pbp5) from pseudomonas aeruginosa in apo state 0.9522 21 362
5tr7-assembly2.cif.gz_B crystal structure of a putative d-alanyl-d-alanine carboxypeptidase from vibrio cholerae o1 biovar eltor str. n16961 0.9467 27 268
1es2-assembly1.cif.gz_A s96a mutant of streptomyces k15 dd-transpeptidase 0.939 26 268
ID Description Score Start End Superfamily
1nj4A01 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.9481 21 269 3.40.710.10
1esiA00 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.9304 26 268 3.40.710.10
3mfdB01 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.9302 29 268 3.40.710.10
1nj4A01 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.9297 21 269 3.40.710.10
3mfdB01 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.9222 29 268 3.40.710.10
ID Description Score Start End GO Terms
AF-A0A0Q6EZD8-F1-model_v4 D-alanyl-D-alanine carboxypeptidase 0.9916 37 265 GO:0006508
GO:0008360
GO:0009002
GO:0009252
GO:0042834
GO:0071555
AF-A0A0P6VW20-F1-model_v4 SPOR domain-containing protein 0.9895 33 265 GO:0006508
GO:0008360
GO:0009002
GO:0009252
GO:0042834
GO:0071555
AF-A0A6L5FJG7-F1-model_v4 Peptidase M15 0.9882 35 268 GO:0006508
GO:0008360
GO:0009002
GO:0009252
GO:0071555
AF-A0A081BEA3-F1-model_v4 Serine-type D-Ala-D-Ala carboxypeptidase 0.9879 33 268 GO:0006508
GO:0008360
GO:0009002
GO:0009252
GO:0042834
GO:0071555
AF-A0A839SQC0-F1-model_v4 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) 0.9876 37 268 GO:0006508
GO:0008360
GO:0009002
GO:0009252
GO:0071555

Feature Viewer

pLDDT pTM Quality
89 0.84 High
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Predicted Structure (AlphaFold2)

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