F377508

General Info

Members Datasets Scaffolds Average Seq Length
271 168 542 542

Family's Representative Sequence

Representative Sequence 3300005468|Ga0070707_100067379|Ga0070707_1000673793
Length 609
Sequence LDFHSLSYRERARVREKLIRATLTSLLSLQKEGEDVLQRNLEGERSARNMIDRERTASQAYLEVAAAHGVEYVFGLPGTSGQEFIGTIADQEKIRFILALHETCVVSMADGYARVSGKPSLAQLSTLPGTANAIGALYDAYRDRSPVVLTSTNVDTRIVGRDSHTEGKDLVELTKQFTKWSCEVHRSDRIPEILNRAFKVAATPPSGPVYLSLPSNLLGESINIKNPDAERSRLIPRMPGDPEALTEAARMLAEARRPLIVAGSGIAKAGAIEELVKLAETVAAPVVMEPRYSFLSFPTTHPYSFQIAERQPTFDLPVWGEPDLILAIGCRLIREYRYLPEPVIKPETRCIHIEEDPWEIGKVFPVDLGIVADAKSALRTLLETFPVKSDGDRKLERVECLRKAKETVKAELEKRAQNGWDATPINAARLVRTMDKLLDSDVLIVNESPTSKDILMSNLQFTPSRAYFSNSSAGHLGWGLGAAIGAKLASPGRRVVACLGDGSCMFGIQGLWTMAKYRVPLVVIVFNNRAYMAVKNQFRGPEERIKIAAQLGAELVGPELNFARIADSFGIFGQRVEEPGQIEVALKRALEQSGPALVDVVISQNTRKD

Samples

Sample ID Description Type Environment
1 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
2 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
9 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
10 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
11 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
17 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
18 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
19 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
24 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
25 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
26 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
27 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
28 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
29 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
30 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
31 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
32 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
33 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
34 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
35 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
37 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
38 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
41 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
42 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
43 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
44 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
45 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
46 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
47 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
48 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
49 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
50 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300027552 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes) (version 2) Metagenome Rhizosphere
68 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
69 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
72 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
73 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
74 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
75 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
76 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
77 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
78 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
79 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
80 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
81 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
82 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
83 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
84 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
85 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
86 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
87 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
88 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
89 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
90 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
91 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
92 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
93 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
94 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
95 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
96 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
97 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
98 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
99 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
100 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
101 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
102 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
103 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
104 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
105 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
106 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
107 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
108 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
109 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
110 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
111 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
112 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
113 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
114 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
115 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
116 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
117 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
118 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
119 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
120 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
121 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
122 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
123 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
124 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
125 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
126 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
127 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
128 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
129 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
130 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
144 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
145 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
146 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
147 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
148 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
149 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
150 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
151 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
152 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
153 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
156 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
157 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
158 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
159 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
160 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
161 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
162 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
163 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
164 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
165 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
166 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
167 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
168 2836160341 Unclassified Planctomycetes Bin 134 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.63
Metatranscriptomes 0
Isolates 0.37

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.11
Nodule 0
Rhizoplane 6.64
Rhizosphere 91.14
Stem 0
Stem Tuber 0
Unclassified 5.9

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070707_100067379 3300005468 Unclassified 3443
2 JGI25153J46596_10002227 3300003215 Bacteria 11319
3 Ga0065712_10001110 3300005290 Bacteria 8475
4 Ga0065715_10120112 3300005293 Bacteria 2252
5 Ga0065707_10087526 3300005295 Unclassified 4990
6 Ga0070670_100001770 3300005331 Bacteria 17579
7 Ga0070670_100001910 3300005331 Bacteria 17062
8 Ga0070680_100002705 3300005336 Bacteria 13149
9 Ga0070671_100069850 3300005355 Bacteria 2930
10 Ga0070705_100002818 3300005440 Bacteria 8669
11 Ga0070708_100022044 3300005445 Bacteria 5399
12 Ga0070678_100137439 3300005456 Bacteria 1951
13 Ga0070681_10011667 3300005458 Bacteria 8701
14 Ga0070706_100119075 3300005467 Bacteria 2461
15 Ga0070707_100001371 3300005468 Bacteria 23925
16 Ga0070698_100036096 3300005471 Bacteria 5109
17 Ga0070698_100132730 3300005471 Bacteria 2445
18 Ga0070679_100036237 3300005530 Bacteria 4895
19 Ga0070697_100001341 3300005536 Bacteria 18617
20 Ga0070686_100090756 3300005544 Unclassified 2043
21 Ga0070696_100023150 3300005546 Unclassified 4222
22 Ga0070696_100050700 3300005546 Bacteria 2885
23 Ga0070693_100052376 3300005547 Bacteria 2340
24 Ga0070665_100000297 3300005548 Bacteria 77862
25 Ga0070665_100131698 3300005548 Unclassified 2503
26 Ga0070664_100000345 3300005564 Bacteria 34003
27 Ga0068859_100061577 3300005617 Bacteria 3781
28 Ga0068864_100083370 3300005618 Bacteria 2807
29 Ga0068858_100102010 3300005842 Bacteria 2676
30 Ga0081455_10002988 3300005937 Bacteria 19735
31 Ga0081455_10098377 3300005937 Bacteria 2355
32 Ga0081538_10002535 3300005981 Bacteria 17782
33 Ga0081538_10003283 3300005981 Bacteria 15354
34 Ga0081540_1011963 3300005983 Bacteria 5754
35 Ga0081539_10003948 3300005985 Bacteria 17183
36 Ga0075428_100016850 3300006844 Bacteria 8071
37 Ga0075428_100026721 3300006844 Bacteria 6391
38 Ga0075431_100000081 3300006847 Bacteria 56763
39 Ga0075431_100042659 3300006847 Bacteria 4680
40 Ga0075431_100215831 3300006847 Bacteria 1958
41 Ga0075433_10000140 3300006852 Bacteria 37816
42 Ga0075433_10001968 3300006852 Bacteria 15443
43 Ga0075433_10003971 3300006852 Bacteria 11458
44 Ga0075433_10138125 3300006852 Bacteria 2166
45 Ga0075434_100006096 3300006871 Bacteria 11035
46 Ga0075434_100044822 3300006871 Bacteria 4387
47 Ga0075434_100067493 3300006871 Bacteria 3562
48 Ga0075434_100072807 3300006871 Bacteria 3428
49 Ga0075434_100075908 3300006871 Bacteria 3355
50 Ga0075434_100078124 3300006871 Unclassified 3305
51 Ga0075434_100087685 3300006871 Bacteria 3113
52 Ga0075429_100000874 3300006880 Bacteria 23769
53 Ga0075429_100117746 3300006880 Bacteria 2322
54 Ga0075436_100001897 3300006914 Bacteria 14369
55 Ga0075436_100027154 3300006914 Bacteria 3941
56 Ga0097620_100061579 3300006931 Bacteria 3781
57 Ga0075435_100001591 3300007076 Bacteria 14646
58 Ga0075435_100004329 3300007076 Bacteria 9763
59 Ga0099794_10004263 3300007265 Bacteria 5589
60 Ga0099794_10017994 3300007265 Archaea 3160
61 Ga0099794_10039435 3300007265 Bacteria 2242
62 Ga0111539_10058713 3300009094 Bacteria 4563
63 Ga0111539_10059423 3300009094 Bacteria 4534
64 Ga0114129_10000123 3300009147 Bacteria 78131
65 Ga0114129_10000605 3300009147 Bacteria 44376
66 Ga0114129_10070320 3300009147 Bacteria 4880
67 Ga0114129_10317252 3300009147 Bacteria 2073
68 Ga0105238_10110419 3300009551 Bacteria 2730
69 Ga0105239_10044883 3300010375 Bacteria 4845
70 Ga0105246_10022503 3300011119 Bacteria 4066
71 Ga0157373_10030221 3300013100 Unclassified 3898
72 Ga0157374_10031657 3300013296 Bacteria 4810
73 Ga0157378_10159907 3300013297 Bacteria 2106
74 Ga0157372_10165772 3300013307 Bacteria 2555
75 Ga0157376_10010485 3300014969 Bacteria 6781
76 Ga0228598_1000587 3300024227 Bacteria 7630
77 Ga0209758_1000438 3300025297 Bacteria 70094
78 Ga0207645_10008169 3300025907 Bacteria 7328
79 Ga0207684_10000468 3300025910 Bacteria 52461
80 Ga0207684_10016331 3300025910 Bacteria 6375
81 Ga0207707_10002922 3300025912 Bacteria 15243
82 Ga0207707_10007910 3300025912 Bacteria 9248
83 Ga0207707_10018790 3300025912 Bacteria 6028
84 Ga0207657_10015639 3300025919 Bacteria 7341
85 Ga0207652_10034029 3300025921 Bacteria 4293
86 Ga0207646_10000497 3300025922 Bacteria 52656
87 Ga0207646_10023112 3300025922 Bacteria 5715
88 Ga0207650_10001359 3300025925 Bacteria 17651
89 Ga0207706_10029579 3300025933 Bacteria 4889
90 Ga0207706_10050598 3300025933 Bacteria 3672
91 Ga0207665_10037325 3300025939 Bacteria 3234
92 Ga0207691_10006522 3300025940 Bacteria 11261
93 Ga0207711_10006571 3300025941 Bacteria 9790
94 Ga0207679_10021063 3300025945 Unclassified 4410
95 Ga0207678_10127365 3300026067 Bacteria 2172
96 Ga0207648_10027595 3300026089 Bacteria 5040
97 Ga0207676_10041592 3300026095 Bacteria 3529
98 Ga0207674_10037269 3300026116 Bacteria 5059
99 Ga0207683_10002675 3300026121 Bacteria 15578
100 Ga0207683_10003914 3300026121 Bacteria 12911
101 Ga0209982_1003419 3300027552 Bacteria 2257
102 Ga0207428_10023521 3300027907 Bacteria 5182
103 Ga0268266_10003388 3300028379 Bacteria 15954
104 Ga0268265_10024874 3300028380 Bacteria 4243
105 Ga0265338_10074603 3300028800 Bacteria 2883
106 Ga0265325_10009809 3300031241 Bacteria 5574
107 Ga0265339_10000064 3300031249 Bacteria 92992
108 Ga0307513_10162942 3300031456 Bacteria 2119
109 Ga0307408_100049038 3300031548 Bacteria 3031
110 Ga0265313_10000020 3300031595 Bacteria 145873
111 Ga0307410_10011178 3300031852 Bacteria 5122
112 Ga0307406_10069343 3300031901 Unclassified 2305
113 Ga0307416_100000705 3300032002 Bacteria 17354
114 Ga0307414_10005197 3300032004 Bacteria 7144
115 Ga0307411_10014493 3300032005 Bacteria 4389
116 Ga0307415_100014504 3300032126 Unclassified 4636
117 Ga0373934_0032839 3300035086 Bacteria 2037
118 Ga0373944_0013275 3300035089 Bacteria 2282
119 Ga0373939_0008025 3300035114 Archaea 2578
120 Ga0373945_0028815 3300035116 Bacteria 1948
121 Ga0373956_0022329 3300035119 Bacteria 2708
122 Ga0373946_0001037 3300035171 Bacteria 9550
123 Ga0373955_0034313 3300035172 Bacteria 2679
124 Ga0316574_0022134 3300035398 Bacteria 3783
125 Ga0373935_0014243 3300035692 Bacteria 4799
126 Ga0373935_0059088 3300035692 Bacteria 2450
127 Ga0373927_0000892 3300035695 Bacteria 22721
128 Ga0373927_0057345 3300035695 Unclassified 2519
129 Ga0373947_0000629 3300035725 Bacteria 20890
130 Ga0373947_0067284 3300035725 Bacteria 2188
131 Ga0373937_0094433 3300036401 Bacteria 2773
132 Ga0373925_0003681 3300037068 Bacteria 11791
133 Ga0436360_0087525 3300039438 Bacteria 2303
134 Ga0436361_0556115 3300039447 Bacteria 2464
135 Ga0451577_0082295 3300042876 Unclassified 2871
136 Ga0453683_0001131 3300044673 Bacteria 24297
137 Ga0451576_0222179 3300045051 Bacteria 1972
138 Ga0495592_0046654 3300046454 Bacteria 3229
139 Ga0495638_0010902 3300046460 Bacteria 6285
140 Ga0495651_0026377 3300046462 Bacteria 4526
141 Ga0495580_0001114 3300046472 Bacteria 23622
142 Ga0495628_0036449 3300046516 Bacteria 3947
143 Ga0495630_0014775 3300046517 Bacteria 5693
144 Ga0495663_0037359 3300046525 Bacteria 1465
145 Ga0495666_0063550 3300046526 Bacteria 1762
146 Ga0495665_0006921 3300046531 Bacteria 6118
147 Ga0495640_0021944 3300046533 Bacteria 4676
148 Ga0495586_0041445 3300046535 Bacteria 2480
149 Ga0495613_0024550 3300046689 Bacteria 4491
150 Ga0495613_0076387 3300046689 Bacteria 2438
151 Ga0495624_0003037 3300046690 Bacteria 12571
152 Ga0495581_0008625 3300047315 Bacteria 5905
153 Ga0495684_0102027 3300047471 Bacteria 2169
154 Ga0496100_0020934 3300048903 Bacteria 3930
155 Ga0496100_0077154 3300048903 Bacteria 2239
156 Ga0496101_0010873 3300048904 Bacteria 6022
157 Ga0496102_0018916 3300048905 Bacteria 6060
158 Ga0496104_0028748 3300048907 Bacteria 5152
159 Ga0496105_0015309 3300048908 Bacteria 6108
160 Ga0496106_0018936 3300048909 Bacteria 5100
161 Ga0496106_0090239 3300048909 Bacteria 2365
162 Ga0496108_0011007 3300048911 Bacteria 7346
163 Ga0496108_0071433 3300048911 Bacteria 2929
164 Ga0496109_0014309 3300048912 Bacteria 6903
165 Ga0496110_0013481 3300048913 Bacteria 6761
166 Ga0496110_0079602 3300048913 Bacteria 2918
167 Ga0496111_0004907 3300048914 Bacteria 8499
168 Ga0496113_0054085 3300048916 Bacteria 3004
169 Ga0496114_0090367 3300048917 Bacteria 2599
170 Ga0496115_0013306 3300048918 Bacteria 6222
171 Ga0496115_0031311 3300048918 Bacteria 4191
172 Ga0496126_0039156 3300048929 Bacteria 4402
173 Ga0501033_0070620 3300049570 Bacteria 2565
174 Ga0501034_0002001 3300049571 Bacteria 25767
175 Ga0501036_0024559 3300049572 Bacteria 5081
176 Ga0501036_0032336 3300049572 Bacteria 4420
177 Ga0501037_0058844 3300049573 Bacteria 2803
178 Ga0501038_0000188 3300049574 Bacteria 53537
179 Ga0501038_0016994 3300049574 Bacteria 6584
180 Ga0501039_0000619 3300049575 Bacteria 25707
181 Ga0501040_0000115 3300049576 Bacteria 42224
182 Ga0501040_0008913 3300049576 Bacteria 6525
183 Ga0501041_0000088 3300049577 Bacteria 36823
184 Ga0501042_0000088 3300049578 Bacteria 35961
185 Ga0501042_0050972 3300049578 Bacteria 2953
186 Ga0501043_0023539 3300049579 Bacteria 4830
187 Ga0501043_0025748 3300049579 Bacteria 4615
188 Ga0501046_0018041 3300049580 Bacteria 5880
189 Ga0501046_0053712 3300049580 Unclassified 3172
190 Ga0501047_0011421 3300049581 Bacteria 8406
191 Ga0501048_0004264 3300049582 Bacteria 10896
192 Ga0501048_0014765 3300049582 Bacteria 5779
193 Ga0501068_0010569 3300049584 Bacteria 5188
194 Ga0501068_0018702 3300049584 Bacteria 4014
195 Ga0501070_0063019 3300049586 Bacteria 3071
196 Ga0501071_0001508 3300049587 Bacteria 13534
197 Ga0501072_0000992 3300049588 Bacteria 20973
198 Ga0501072_0029060 3300049588 Bacteria 4316
199 Ga0501072_0058757 3300049588 Bacteria 3031
200 Ga0501075_0001264 3300049591 Bacteria 16370
201 Ga0501075_0007083 3300049591 Bacteria 7751
202 Ga0501075_0011977 3300049591 Bacteria 6154
203 Ga0501075_0014464 3300049591 Bacteria 5655
204 Ga0501075_0034006 3300049591 Bacteria 3794
205 Ga0501075_0129512 3300049591 Unclassified 1922
206 Ga0501076_0000602 3300049592 Bacteria 23034
207 Ga0501076_0004830 3300049592 Bacteria 9620
208 Ga0501077_0002619 3300049593 Bacteria 10773
209 Ga0501077_0005997 3300049593 Bacteria 7426
210 Ga0501077_0019416 3300049593 Unclassified 4299
211 Ga0501077_0020090 3300049593 Bacteria 4227
212 Ga0501077_0023584 3300049593 Bacteria 3901
213 Ga0501077_0041819 3300049593 Bacteria 2917
214 Ga0501079_0000907 3300049741 Bacteria 20335
215 Ga0501079_0002916 3300049741 Bacteria 12490
216 Ga0501079_0014712 3300049741 Bacteria 5963
217 Ga0501079_0110549 3300049741 Bacteria 2135
218 Ga0501080_0003490 3300049742 Bacteria 13851
219 Ga0501081_0001139 3300049743 Bacteria 16054
220 Ga0501081_0003488 3300049743 Bacteria 10051
221 Ga0501081_0005817 3300049743 Bacteria 7984
222 Ga0501081_0027035 3300049743 Bacteria 3872
223 Ga0501035_0012982 3300049822 Bacteria 7686
224 Ga0501035_0015552 3300049822 Bacteria 7021
225 Ga0501044_0004711 3300049823 Bacteria 15250
226 Ga0501044_0013208 3300049823 Bacteria 8943
227 Ga0501044_0026669 3300049823 Bacteria 6115
228 Ga0501045_0000351 3300049824 Bacteria 27309
229 Ga0501045_0024637 3300049824 Bacteria 4321
230 nmdc:mga0k408_2424_c1 3300050493 Bacteria 9918
231 nmdc:mga05p37_190468_c1 3300050507 Bacteria 2491
232 nmdc:mga05p37_230520_c1 3300050507 Bacteria 2232
233 nmdc:mga05p37_24352_c1 3300050507 Bacteria 7355
234 nmdc:mga05p37_280_c1 3300050507 Bacteria 53286
235 nmdc:mga05p37_37352_c1 3300050507 Bacteria 5955
236 nmdc:mga05p37_38140_c1 3300050507 Bacteria 5893
237 nmdc:mga05p37_39636_c1 3300050507 Bacteria 5785
238 nmdc:mga05p37_64460_c1 3300050507 Bacteria 4508
239 nmdc:mga05p37_78373_c1 3300050507 Bacteria 4068
240 nmdc:mga09592_11118_c1 3300050508 Bacteria 7322
241 nmdc:mga09592_7789_c1 3300050508 Bacteria 8704
242 nmdc:mga06r32_126316_c1 3300050510 Bacteria 1967
243 nmdc:mga06r32_176241_c1 3300050510 Bacteria 2123
244 nmdc:mga06r32_191899_c1 3300050510 Bacteria 2030
245 nmdc:mga06r32_4042_c1 3300050510 Bacteria 13155
246 nmdc:mga06r32_53674_c1 3300050510 Bacteria 3862
247 nmdc:mga08y16_31289_c1 3300050511 Bacteria 5598
248 nmdc:mga0n895_25722_c1 3300050512 Bacteria 5566
249 nmdc:mga0n895_52668_c1 3300050512 Bacteria 3996
250 nmdc:mga0n895_7548_c1 3300050512 Bacteria 9347
251 nmdc:mga0n895_86955_c1 3300050512 Bacteria 3123
252 nmdc:mga0rr50_128148_c1 3300050513 Bacteria 2028
253 nmdc:mga0rr50_174_c1 3300050513 Bacteria 34420
254 nmdc:mga0rr50_18684_c1 3300050513 Unclassified 4662
255 nmdc:mga0a205_117977_c1 3300050515 Bacteria 2552
256 nmdc:mga0a205_15815_c1 3300050515 Bacteria 7055
257 nmdc:mga0a205_162448_c1 3300050515 Bacteria 2130
258 nmdc:mga0a205_182086_c1 3300050515 Bacteria 1995
259 nmdc:mga0a205_19500_c1 3300050515 Bacteria 6395
260 Ga0495619_0009881 3300053085 Bacteria 6013
261 Ga0501084_0000924 3300054114 Bacteria 22698
262 Ga0501084_0004364 3300054114 Bacteria 11526
263 Ga0501084_0010421 3300054114 Bacteria 7686
264 Ga0501084_0110145 3300054114 Bacteria 2314
265 Ga0501082_0002343 3300060353 Bacteria 16578
266 Ga0501082_0002968 3300060353 Bacteria 14808
267 Ga0501082_0005047 3300060353 Bacteria 11512
268 Ga0530510_0000464 3300061734 Bacteria 26163
269 Ga0530510_0019086 3300061734 Bacteria 4863
270 Ga0530510_0030602 3300061734 Bacteria 3867
271 2836160659 2836160341 Unclassified 5867367
272 Ga0070707_100067379
273 JGI25153J46596_10002227
274 Ga0065712_10001110
275 Ga0065715_10120112
276 Ga0065707_10087526
277 Ga0070670_100001770
278 Ga0070670_100001910
279 Ga0070680_100002705
280 Ga0070671_100069850
281 Ga0070705_100002818
282 Ga0070708_100022044
283 Ga0070678_100137439
284 Ga0070681_10011667
285 Ga0070706_100119075
286 Ga0070707_100001371
287 Ga0070698_100036096
288 Ga0070698_100132730
289 Ga0070679_100036237
290 Ga0070697_100001341
291 Ga0070686_100090756
292 Ga0070696_100023150
293 Ga0070696_100050700
294 Ga0070693_100052376
295 Ga0070665_100000297
296 Ga0070665_100131698
297 Ga0070664_100000345
298 Ga0068859_100061577
299 Ga0068864_100083370
300 Ga0068858_100102010
301 Ga0081455_10002988
302 Ga0081455_10098377
303 Ga0081538_10002535
304 Ga0081538_10003283
305 Ga0081540_1011963
306 Ga0081539_10003948
307 Ga0075428_100016850
308 Ga0075428_100026721
309 Ga0075431_100000081
310 Ga0075431_100042659
311 Ga0075431_100215831
312 Ga0075433_10000140
313 Ga0075433_10001968
314 Ga0075433_10003971
315 Ga0075433_10138125
316 Ga0075434_100006096
317 Ga0075434_100044822
318 Ga0075434_100067493
319 Ga0075434_100072807
320 Ga0075434_100075908
321 Ga0075434_100078124
322 Ga0075434_100087685
323 Ga0075429_100000874
324 Ga0075429_100117746
325 Ga0075436_100001897
326 Ga0075436_100027154
327 Ga0097620_100061579
328 Ga0075435_100001591
329 Ga0075435_100004329
330 Ga0099794_10004263
331 Ga0099794_10017994
332 Ga0099794_10039435
333 Ga0111539_10058713
334 Ga0111539_10059423
335 Ga0114129_10000123
336 Ga0114129_10000605
337 Ga0114129_10070320
338 Ga0114129_10317252
339 Ga0105238_10110419
340 Ga0105239_10044883
341 Ga0105246_10022503
342 Ga0157373_10030221
343 Ga0157374_10031657
344 Ga0157378_10159907
345 Ga0157372_10165772
346 Ga0157376_10010485
347 Ga0228598_1000587
348 Ga0209758_1000438
349 Ga0207645_10008169
350 Ga0207684_10000468
351 Ga0207684_10016331
352 Ga0207707_10002922
353 Ga0207707_10007910
354 Ga0207707_10018790
355 Ga0207657_10015639
356 Ga0207652_10034029
357 Ga0207646_10000497
358 Ga0207646_10023112
359 Ga0207650_10001359
360 Ga0207706_10029579
361 Ga0207706_10050598
362 Ga0207665_10037325
363 Ga0207691_10006522
364 Ga0207711_10006571
365 Ga0207679_10021063
366 Ga0207678_10127365
367 Ga0207648_10027595
368 Ga0207676_10041592
369 Ga0207674_10037269
370 Ga0207683_10002675
371 Ga0207683_10003914
372 Ga0209982_1003419
373 Ga0207428_10023521
374 Ga0268266_10003388
375 Ga0268265_10024874
376 Ga0265338_10074603
377 Ga0265325_10009809
378 Ga0265339_10000064
379 Ga0307513_10162942
380 Ga0307408_100049038
381 Ga0265313_10000020
382 Ga0307410_10011178
383 Ga0307406_10069343
384 Ga0307416_100000705
385 Ga0307414_10005197
386 Ga0307411_10014493
387 Ga0307415_100014504
388 Ga0373934_0032839
389 Ga0373944_0013275
390 Ga0373939_0008025
391 Ga0373945_0028815
392 Ga0373956_0022329
393 Ga0373946_0001037
394 Ga0373955_0034313
395 Ga0316574_0022134
396 Ga0373935_0014243
397 Ga0373935_0059088
398 Ga0373927_0000892
399 Ga0373927_0057345
400 Ga0373947_0000629
401 Ga0373947_0067284
402 Ga0373937_0094433
403 Ga0373925_0003681
404 Ga0436360_0087525
405 Ga0436361_0556115
406 Ga0451577_0082295
407 Ga0453683_0001131
408 Ga0451576_0222179
409 Ga0495592_0046654
410 Ga0495638_0010902
411 Ga0495651_0026377
412 Ga0495580_0001114
413 Ga0495628_0036449
414 Ga0495630_0014775
415 Ga0495663_0037359
416 Ga0495666_0063550
417 Ga0495665_0006921
418 Ga0495640_0021944
419 Ga0495586_0041445
420 Ga0495613_0024550
421 Ga0495613_0076387
422 Ga0495624_0003037
423 Ga0495581_0008625
424 Ga0495684_0102027
425 Ga0496100_0020934
426 Ga0496100_0077154
427 Ga0496101_0010873
428 Ga0496102_0018916
429 Ga0496104_0028748
430 Ga0496105_0015309
431 Ga0496106_0018936
432 Ga0496106_0090239
433 Ga0496108_0011007
434 Ga0496108_0071433
435 Ga0496109_0014309
436 Ga0496110_0013481
437 Ga0496110_0079602
438 Ga0496111_0004907
439 Ga0496113_0054085
440 Ga0496114_0090367
441 Ga0496115_0013306
442 Ga0496115_0031311
443 Ga0496126_0039156
444 Ga0501033_0070620
445 Ga0501034_0002001
446 Ga0501036_0024559
447 Ga0501036_0032336
448 Ga0501037_0058844
449 Ga0501038_0000188
450 Ga0501038_0016994
451 Ga0501039_0000619
452 Ga0501040_0000115
453 Ga0501040_0008913
454 Ga0501041_0000088
455 Ga0501042_0000088
456 Ga0501042_0050972
457 Ga0501043_0023539
458 Ga0501043_0025748
459 Ga0501046_0018041
460 Ga0501046_0053712
461 Ga0501047_0011421
462 Ga0501048_0004264
463 Ga0501048_0014765
464 Ga0501068_0010569
465 Ga0501068_0018702
466 Ga0501070_0063019
467 Ga0501071_0001508
468 Ga0501072_0000992
469 Ga0501072_0029060
470 Ga0501072_0058757
471 Ga0501075_0001264
472 Ga0501075_0007083
473 Ga0501075_0011977
474 Ga0501075_0014464
475 Ga0501075_0034006
476 Ga0501075_0129512
477 Ga0501076_0000602
478 Ga0501076_0004830
479 Ga0501077_0002619
480 Ga0501077_0005997
481 Ga0501077_0019416
482 Ga0501077_0020090
483 Ga0501077_0023584
484 Ga0501077_0041819
485 Ga0501079_0000907
486 Ga0501079_0002916
487 Ga0501079_0014712
488 Ga0501079_0110549
489 Ga0501080_0003490
490 Ga0501081_0001139
491 Ga0501081_0003488
492 Ga0501081_0005817
493 Ga0501081_0027035
494 Ga0501035_0012982
495 Ga0501035_0015552
496 Ga0501044_0004711
497 Ga0501044_0013208
498 Ga0501044_0026669
499 Ga0501045_0000351
500 Ga0501045_0024637
501 nmdc:mga0k408_2424_c1
502 nmdc:mga05p37_190468_c1
503 nmdc:mga05p37_230520_c1
504 nmdc:mga05p37_24352_c1
505 nmdc:mga05p37_280_c1
506 nmdc:mga05p37_37352_c1
507 nmdc:mga05p37_38140_c1
508 nmdc:mga05p37_39636_c1
509 nmdc:mga05p37_64460_c1
510 nmdc:mga05p37_78373_c1
511 nmdc:mga09592_11118_c1
512 nmdc:mga09592_7789_c1
513 nmdc:mga06r32_126316_c1
514 nmdc:mga06r32_176241_c1
515 nmdc:mga06r32_191899_c1
516 nmdc:mga06r32_4042_c1
517 nmdc:mga06r32_53674_c1
518 nmdc:mga08y16_31289_c1
519 nmdc:mga0n895_25722_c1
520 nmdc:mga0n895_52668_c1
521 nmdc:mga0n895_7548_c1
522 nmdc:mga0n895_86955_c1
523 nmdc:mga0rr50_128148_c1
524 nmdc:mga0rr50_174_c1
525 nmdc:mga0rr50_18684_c1
526 nmdc:mga0a205_117977_c1
527 nmdc:mga0a205_15815_c1
528 nmdc:mga0a205_162448_c1
529 nmdc:mga0a205_182086_c1
530 nmdc:mga0a205_19500_c1
531 Ga0495619_0009881
532 Ga0501084_0000924
533 Ga0501084_0004364
534 Ga0501084_0010421
535 Ga0501084_0110145
536 Ga0501082_0002343
537 Ga0501082_0002968
538 Ga0501082_0005047
539 Ga0530510_0000464
540 Ga0530510_0019086
541 Ga0530510_0030602
542 2836160659

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02776

TPP_enzyme_N

Thiamine pyrophosphate enzyme, N-terminal TPP binding domain

55

173

0.94

PF02775

TPP_enzyme_C

Thiamine pyrophosphate enzyme, C-terminal TPP binding domain

451

600

0.9

PF00205

TPP_enzyme_M

Thiamine pyrophosphate enzyme, central domain

245

381

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
6m2z-assembly1.cif.gz_A crystal structure of a formolase, bfd variant m3 from pseudomonas putida 0.9222 4 531
6m2z-assembly1.cif.gz_A crystal structure of a formolase, bfd variant m3 from pseudomonas putida 0.9205 4 531
4gm0-assembly1.cif.gz_A crystal structure of benzoylformate decarboxylase mutant l403n 0.9165 4 531
4q9d-assembly1.cif.gz_B-2 x-ray structure of a putative thiamin diphosphate-dependent enzyme isolated from mycobacterium smegmatis 0.9159 2 529
4gm0-assembly1.cif.gz_A crystal structure of benzoylformate decarboxylase mutant l403n 0.9148 4 531
ID Description Score Start End Superfamily
6a50B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9581 5 171 3.40.50.970
af_P0DP89_1_170_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9536 4 173 3.40.50.970
3eyaI01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.943 2 170 3.40.50.970
af_P0DP89_1_170_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9428 4 173 3.40.50.970
af_O53554_1_171_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9424 4 181 3.40.50.970
ID Description Score Start End GO Terms
AF-A0A7C7R5L1-F1-model_v4 Thiamine pyrophosphate-binding protein 0.9703 2 182 GO:0003984
GO:0030976
GO:0050660
AF-A0A3S1IKD7-F1-model_v4 Acetolactate synthase large subunit 0.9691 4 151 GO:0003984
GO:0030976
GO:0050660
AF-A0A7W1NE97-F1-model_v4 Thiamine pyrophosphate-binding protein 0.9668 2 180 GO:0003984
GO:0030976
GO:0050660
AF-A0A3S1IKD7-F1-model_v4 Acetolactate synthase large subunit 0.9628 4 151 GO:0003984
GO:0030976
GO:0050660
AF-A0A4V3GXW3-F1-model_v4 deleted 0.9615 1 347

Map