F377278

General Info

Members Datasets Scaffolds Average Seq Length
270 178 540 467

Family's Representative Sequence

Representative Sequence 3300050513|nmdc:mga0rr50_21227_c1|nmdc:mga0rr50_21227_c1_1084_2595
Length 503
Sequence MASALPRLVPQHGGHDRPLRGLCGRGEEEINELMTPSDLVERLAAHRTLGAAPREELAWLASHGTFRHVNPGEVVAQKGQPVEELWVVLSGRLAIFVDRGTGVHKTVEWRTGDVTGLLPYSRLTTPPGYSTAQEPTEILALHRDHLPGMIQSCQAITTILVHSMLDRARMFTSNDLHDEKMLSLGRLSAGLAHELNNPASAIERSATLLEDRLDDGEQATRLFAGARLTEAQLAAVDTFRQSCHVRVHGVPSPIEQAEREEEIADWLAAHAVETRIADAIAETPTTIDALDRLSTAIEGPALEAVLRWTAAACSVRSLASEIQDAATRISGLVLAVKGFTHMDQATVAEPVDLLQSVGNTVAVLRSKARQKAASIAVDVEPDLPPVRGFAGELNQIWVNLIDNALDAVGKDGRIEVLAARDGARVLVRIVDNGPGIPSDVRDRIFDPFFTTKPMGLGTGLGLDIVRRLVRHNEGEIAVESRPGRTEFRVELPIAESDAAGVSS

Samples

Sample ID Description Type Environment
1 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
2 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
19 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
20 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
21 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
22 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
23 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
24 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
25 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
26 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
27 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
28 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
29 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
30 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
31 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
36 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
37 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
38 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
39 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
40 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
41 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
42 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
43 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
44 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
45 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
46 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
47 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
49 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
50 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
51 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
52 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
53 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
54 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
56 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
57 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
60 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
61 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
62 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
63 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
64 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
65 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
66 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
67 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
68 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
69 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
70 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
71 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
72 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
106 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
110 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
111 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
112 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
113 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
114 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
115 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
116 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
117 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
118 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
119 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
120 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
121 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
122 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
123 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
124 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
125 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
126 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
127 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
128 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
129 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
130 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
131 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
132 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
133 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
134 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
135 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
136 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
137 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
138 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
139 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
140 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
141 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
142 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
143 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
153 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
154 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
155 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
156 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
157 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
158 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
159 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
160 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
161 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
162 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
163 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
165 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
166 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
167 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
168 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
169 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
170 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
171 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
172 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
173 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
174 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
175 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
176 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
177 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
178 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.37
Nodule 0
Rhizoplane 2.96
Rhizosphere 95.93
Stem 0
Stem Tuber 0
Unclassified 1.11

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga0rr50_21227_c1 3300050513 Bacteria 4429
2 Ga0065704_10081535 3300005289 Bacteria 3744
3 Ga0065707_10002527 3300005295 Bacteria 9384
4 Ga0070683_100000260 3300005329 Bacteria 36410
5 Ga0070690_100037808 3300005330 Bacteria 3043
6 Ga0070670_100006597 3300005331 Bacteria 9836
7 Ga0070670_100069785 3300005331 Bacteria 3017
8 Ga0070677_10011368 3300005333 Bacteria 3069
9 Ga0070666_10002366 3300005335 Bacteria 11394
10 Ga0070680_100135092 3300005336 Bacteria 2066
11 Ga0070660_100112594 3300005339 Bacteria 2166
12 Ga0070687_100011805 3300005343 Bacteria 3836
13 Ga0070661_100006116 3300005344 Bacteria 8288
14 Ga0070669_100001755 3300005353 Bacteria 15637
15 Ga0070669_100001918 3300005353 Bacteria 15018
16 Ga0070669_100019728 3300005353 Bacteria 4816
17 Ga0070675_100014397 3300005354 Bacteria 6237
18 Ga0070675_100117118 3300005354 Bacteria 2260
19 Ga0070671_100059994 3300005355 Bacteria 3167
20 Ga0070674_100033915 3300005356 Bacteria 3403
21 Ga0070673_100128229 3300005364 Bacteria 2125
22 Ga0070673_100210678 3300005364 Bacteria 1678
23 Ga0070659_100207008 3300005366 Bacteria 1616
24 Ga0070667_100001111 3300005367 Bacteria 24543
25 Ga0070714_100176018 3300005435 Bacteria 1944
26 Ga0070713_100120494 3300005436 Unclassified 2300
27 Ga0070700_100063998 3300005441 Bacteria 2328
28 Ga0070700_100086346 3300005441 Bacteria 2037
29 Ga0070694_100030641 3300005444 Bacteria 3521
30 Ga0070678_100002433 3300005456 Bacteria 10199
31 Ga0070678_100069269 3300005456 Bacteria 2634
32 Ga0070681_10033269 3300005458 Bacteria 5175
33 Ga0070681_10176646 3300005458 Bacteria 2057
34 Ga0068867_100003548 3300005459 Bacteria 10967
35 Ga0070699_100014713 3300005518 Bacteria 6728
36 Ga0070679_100024455 3300005530 Bacteria 5918
37 Ga0070679_100112384 3300005530 Bacteria 2710
38 Ga0070684_100006802 3300005535 Bacteria 8868
39 Ga0070672_100028841 3300005543 Bacteria 4156
40 Ga0070686_100018410 3300005544 Bacteria 4099
41 Ga0070665_100044093 3300005548 Bacteria 4480
42 Ga0070665_100069993 3300005548 Bacteria 3515
43 Ga0070704_100019156 3300005549 Bacteria 4393
44 Ga0068855_100065393 3300005563 Bacteria 4240
45 Ga0070664_100003232 3300005564 Bacteria 13170
46 Ga0070664_100152872 3300005564 Bacteria 2038
47 Ga0068857_100003496 3300005577 Bacteria 13116
48 Ga0068852_100204281 3300005616 Bacteria 1871
49 Ga0068859_100012662 3300005617 Bacteria 8480
50 Ga0068864_100028163 3300005618 Bacteria 4748
51 Ga0068864_100041375 3300005618 Bacteria 3942
52 Ga0068864_100043654 3300005618 Bacteria 3839
53 Ga0068861_100002180 3300005719 Bacteria 12714
54 Ga0068870_10019567 3300005840 Bacteria 3285
55 Ga0068858_100141613 3300005842 Bacteria 2258
56 Ga0068858_100167696 3300005842 Bacteria 2069
57 Ga0068860_100002778 3300005843 Bacteria 18198
58 Ga0068860_100052999 3300005843 Bacteria 3857
59 Ga0068862_100002600 3300005844 Bacteria 15917
60 Ga0068862_100005888 3300005844 Bacteria 10211
61 Ga0068862_100007797 3300005844 Bacteria 8854
62 Ga0070717_10003548 3300006028 Bacteria 11181
63 Ga0070712_100020835 3300006175 Bacteria 4296
64 Ga0097621_100071206 3300006237 Bacteria 2873
65 Ga0097621_100100640 3300006237 Bacteria 2431
66 Ga0075428_100029571 3300006844 Bacteria 6061
67 Ga0075428_100066743 3300006844 Bacteria 3939
68 Ga0075428_100198923 3300006844 Bacteria 2167
69 Ga0075430_100022795 3300006846 Bacteria 5324
70 Ga0075430_100035179 3300006846 Bacteria 4251
71 Ga0075430_100076217 3300006846 Bacteria 2811
72 Ga0075431_100016669 3300006847 Bacteria 7459
73 Ga0075431_100038040 3300006847 Bacteria 4954
74 Ga0075433_10066782 3300006852 Bacteria 3156
75 Ga0075434_100105003 3300006871 Bacteria 2835
76 Ga0075434_100146175 3300006871 Bacteria 2385
77 Ga0075434_100241388 3300006871 Bacteria 1827
78 Ga0075429_100007717 3300006880 Bacteria 9339
79 Ga0075429_100025559 3300006880 Bacteria 5125
80 Ga0075429_100059752 3300006880 Bacteria 3321
81 Ga0097620_100012662 3300006931 Bacteria 8480
82 Ga0075435_100007991 3300007076 Bacteria 7572
83 Ga0075435_100225242 3300007076 Bacteria 1593
84 Ga0105240_10000001 3300009093 Bacteria 2887840
85 Ga0111539_10008178 3300009094 Bacteria 13323
86 Ga0111539_10023281 3300009094 Bacteria 7609
87 Ga0111539_10099957 3300009094 Bacteria 3406
88 Ga0111539_10109880 3300009094 Bacteria 3235
89 Ga0111539_10367462 3300009094 Bacteria 1675
90 Ga0114129_10027028 3300009147 Bacteria 8125
91 Ga0114129_10065089 3300009147 Bacteria 5088
92 Ga0114129_10081193 3300009147 Bacteria 4507
93 Ga0114129_10165039 3300009147 Bacteria 3023
94 Ga0114129_10232719 3300009147 Bacteria 2481
95 Ga0105248_10006587 3300009177 Bacteria 12734
96 Ga0105248_10016748 3300009177 Bacteria 8070
97 Ga0105248_10020043 3300009177 Bacteria 7405
98 Ga0105238_10149041 3300009551 Bacteria 2315
99 Ga0105249_10005802 3300009553 Bacteria 10678
100 Ga0105249_10021378 3300009553 Bacteria 5793
101 Ga0157371_10013237 3300013102 Bacteria 6278
102 Ga0157369_10092893 3300013105 Bacteria 3221
103 Ga0157369_10127085 3300013105 Bacteria 2702
104 Ga0157374_10013062 3300013296 Bacteria 7243
105 Ga0157374_10027125 3300013296 Bacteria 5162
106 Ga0157374_10106886 3300013296 Bacteria 2689
107 Ga0163162_10032969 3300013306 Bacteria 5144
108 Ga0163162_10200609 3300013306 Bacteria 2124
109 Ga0163162_10288150 3300013306 Bacteria 1774
110 Ga0157372_10019494 3300013307 Bacteria 7313
111 Ga0157375_10002289 3300013308 Bacteria 16555
112 Ga0163163_10002332 3300014325 Bacteria 16040
113 Ga0157379_10018364 3300014968 Bacteria 6165
114 Ga0157379_10108683 3300014968 Bacteria 2490
115 Ga0163161_10108556 3300017792 Bacteria 2072
116 Ga0213876_10059583 3300021384 Bacteria 2015
117 Ga0207682_10011413 3300025893 Bacteria 3469
118 Ga0207680_10088152 3300025903 Bacteria 1966
119 Ga0207643_10005384 3300025908 Bacteria 6850
120 Ga0207707_10039347 3300025912 Bacteria 4134
121 Ga0207707_10179455 3300025912 Bacteria 1849
122 Ga0207695_10000001 3300025913 Bacteria 2888630
123 Ga0207693_10032581 3300025915 Bacteria 4112
124 Ga0207662_10023252 3300025918 Bacteria 3559
125 Ga0207649_10007635 3300025920 Bacteria 5881
126 Ga0207681_10006855 3300025923 Bacteria 6985
127 Ga0207694_10031713 3300025924 Bacteria 4040
128 Ga0207650_10052023 3300025925 Bacteria 3033
129 Ga0207650_10170332 3300025925 Unclassified 1730
130 Ga0207659_10117605 3300025926 Bacteria 2032
131 Ga0207644_10028348 3300025931 Bacteria 3876
132 Ga0207644_10134824 3300025931 Bacteria 1895
133 Ga0207706_10019148 3300025933 Bacteria 6157
134 Ga0207706_10245127 3300025933 Bacteria 1566
135 Ga0207691_10004148 3300025940 Bacteria 14079
136 Ga0207691_10007325 3300025940 Bacteria 10643
137 Ga0207691_10079534 3300025940 Bacteria 2950
138 Ga0207691_10115642 3300025940 Bacteria 2382
139 Ga0207711_10012468 3300025941 Bacteria 7065
140 Ga0207711_10036311 3300025941 Bacteria 4181
141 Ga0207661_10004467 3300025944 Bacteria 9825
142 Ga0207679_10015871 3300025945 Bacteria 4991
143 Ga0207679_10019927 3300025945 Bacteria 4518
144 Ga0207667_10015185 3300025949 Bacteria 8755
145 Ga0207667_10136569 3300025949 Bacteria 2525
146 Ga0207651_10030330 3300025960 Bacteria 3442
147 Ga0207651_10224765 3300025960 Bacteria 1520
148 Ga0207712_10016453 3300025961 Bacteria 4790
149 Ga0207668_10025469 3300025972 Bacteria 3829
150 Ga0207658_10003584 3300025986 Bacteria 10965
151 Ga0207703_10046033 3300026035 Bacteria 3512
152 Ga0207703_10046098 3300026035 Bacteria 3510
153 Ga0207678_10102357 3300026067 Bacteria 2445
154 Ga0207708_10085864 3300026075 Bacteria 2421
155 Ga0207641_10005952 3300026088 Bacteria 10336
156 Ga0207641_10084371 3300026088 Bacteria 2765
157 Ga0207648_10000721 3300026089 Bacteria 37072
158 Ga0207676_10082596 3300026095 Bacteria 2614
159 Ga0207674_10004013 3300026116 Bacteria 17875
160 Ga0207675_100000674 3300026118 Bacteria 33661
161 Ga0207675_100051776 3300026118 Bacteria 3831
162 Ga0207675_100123684 3300026118 Bacteria 2449
163 Ga0207683_10003539 3300026121 Bacteria 13622
164 Ga0207683_10004055 3300026121 Bacteria 12658
165 Ga0207698_10094461 3300026142 Bacteria 2459
166 Ga0207428_10000609 3300027907 Bacteria 42361
167 Ga0268266_10066160 3300028379 Unclassified 3125
168 Ga0268265_10000674 3300028380 Bacteria 33736
169 Ga0268265_10022512 3300028380 Bacteria 4429
170 Ga0268264_10045231 3300028381 Bacteria 3654
171 Ga0268264_10067012 3300028381 Bacteria 3029
172 Ga0265338_10073554 3300028800 Bacteria 2912
173 Ga0265316_10014948 3300031344 Bacteria 6807
174 Ga0265313_10023573 3300031595 Bacteria 3313
175 Ga0373956_0033249 3300035119 Bacteria 2267
176 Ga0373943_0005089 3300035170 Bacteria 5926
177 Ga0373946_0009877 3300035171 Bacteria 3526
178 Ga0373955_0034565 3300035172 Bacteria 2671
179 Ga0373924_0004164 3300035410 Bacteria 5035
180 Ga0373935_0022817 3300035692 Bacteria 3841
181 Ga0373947_0015194 3300035725 Bacteria 4420
182 Ga0373937_0006993 3300036401 Bacteria 9737
183 Ga0373937_0131756 3300036401 Bacteria 2335
184 Ga0436365_0717200 3300039437 Bacteria 2230
185 Ga0453684_0024983 3300044712 Bacteria 8693
186 Ga0451576_0010957 3300045051 Bacteria 10361
187 Ga0451576_0022037 3300045051 Bacteria 6913
188 Ga0495603_0044925 3300046455 Bacteria 2636
189 Ga0495580_0006892 3300046472 Bacteria 9180
190 Ga0495594_0012695 3300046499 Bacteria 4394
191 Ga0495608_0006306 3300046511 Bacteria 8412
192 Ga0495630_0002330 3300046517 Bacteria 13211
193 Ga0495665_0017162 3300046531 Bacteria 3894
194 Ga0495667_0002035 3300046559 Bacteria 13405
195 Ga0495667_0023593 3300046559 Bacteria 4143
196 Ga0495659_0003543 3300046664 Bacteria 4970
197 Ga0495613_0001497 3300046689 Bacteria 17775
198 Ga0495680_0057120 3300047322 Bacteria 3020
199 Ga0495684_0005119 3300047471 Bacteria 10227
200 Ga0495684_0016915 3300047471 Bacteria 5618
201 Ga0495686_0001223 3300047472 Bacteria 29387
202 Ga0495686_0004892 3300047472 Bacteria 10801
203 Ga0495602_0133438 3300048088 Bacteria 1976
204 Ga0496104_0002024 3300048907 Bacteria 17607
205 Ga0496105_0009858 3300048908 Bacteria 7489
206 Ga0496108_0029227 3300048911 Bacteria 4563
207 Ga0496109_0011191 3300048912 Bacteria 7700
208 Ga0496110_0007049 3300048913 Bacteria 8942
209 Ga0496112_0000729 3300048915 Bacteria 22860
210 Ga0496112_0215226 3300048915 Bacteria 1878
211 Ga0496115_0030551 3300048918 Bacteria 4239
212 Ga0501032_0003188 3300049569 Bacteria 12624
213 Ga0501036_0007019 3300049572 Bacteria 9167
214 Ga0501036_0220883 3300049572 Bacteria 1591
215 Ga0501037_0037262 3300049573 Bacteria 3584
216 Ga0501038_0002217 3300049574 Bacteria 18080
217 Ga0501039_0000730 3300049575 Bacteria 23721
218 Ga0501042_0025670 3300049578 Bacteria 4140
219 Ga0501042_0076802 3300049578 Bacteria 2391
220 Ga0501043_0020158 3300049579 Bacteria 5234
221 Ga0501046_0004816 3300049580 Bacteria 12163
222 Ga0501048_0035518 3300049582 Bacteria 3588
223 Ga0501048_0087182 3300049582 Bacteria 2202
224 Ga0501067_0009891 3300049583 Bacteria 5281
225 Ga0501068_0000067 3300049584 Bacteria 40810
226 Ga0501069_0005062 3300049585 Bacteria 6833
227 Ga0501070_0094762 3300049586 Bacteria 2470
228 Ga0501071_0054646 3300049587 Bacteria 2881
229 Ga0501072_0001144 3300049588 Bacteria 19710
230 Ga0501072_0024108 3300049588 Bacteria 4731
231 Ga0501074_0032225 3300049590 Bacteria 3797
232 Ga0501075_0033001 3300049591 Bacteria 3850
233 Ga0501076_0046657 3300049592 Bacteria 3423
234 Ga0501076_0192587 3300049592 Bacteria 1664
235 Ga0501080_0000129 3300049742 Bacteria 53483
236 Ga0501081_0002134 3300049743 Bacteria 12381
237 Ga0501044_0041952 3300049823 Bacteria 4762
238 Ga0501045_0001255 3300049824 Bacteria 16834
239 nmdc:mga05p37_116182_c1 3300050507 Bacteria 3288
240 nmdc:mga05p37_154143_c1 3300050507 Bacteria 2809
241 nmdc:mga05p37_20487_c1 3300050507 Bacteria 8000
242 nmdc:mga09592_13949_c1 3300050508 Bacteria 6563
243 nmdc:mga09592_187656_c1 3300050508 Bacteria 1789
244 nmdc:mga09592_51365_c1 3300050508 Bacteria 3478
245 nmdc:mga0qj67_56104_c1 3300050509 Bacteria 3122
246 nmdc:mga0qj67_69458_c1 3300050509 Bacteria 2810
247 nmdc:mga06r32_106327_c1 3300050510 Bacteria 2757
248 nmdc:mga06r32_19091_c1 3300050510 Bacteria 6288
249 nmdc:mga06r32_98425_c1 3300050510 Bacteria 2867
250 nmdc:mga08y16_11047_c1 3300050511 Bacteria 9482
251 nmdc:mga08y16_12612_c1 3300050511 Bacteria 8891
252 nmdc:mga08y16_238072_c1 3300050511 Bacteria 1882
253 nmdc:mga08y16_84664_c1 3300050511 Bacteria 3305
254 nmdc:mga08y16_909_c1 3300050511 Bacteria 28652
255 nmdc:mga0n895_152636_c1 3300050512 Bacteria 2340
256 nmdc:mga0n895_25661_c1 3300050512 Bacteria 5571
257 nmdc:mga0n895_50279_c1 3300050512 Bacteria 4086
258 nmdc:mga0a205_48268_c1 3300050515 Bacteria 4109
259 Ga0495601_0044876 3300053077 Bacteria 2778
260 Ga0495595_0022284 3300053084 Bacteria 2779
261 Ga0495619_0021923 3300053085 Bacteria 4083
262 Ga0500595_000004 3300053119 Bacteria 410922
263 Ga0501084_0003862 3300054114 Bacteria 12197
264 Ga0501084_0027452 3300054114 Bacteria 4756
265 Ga0501084_0039025 3300054114 Bacteria 3972
266 Ga0501082_0000692 3300060353 Bacteria 29748
267 Ga0501082_0005324 3300060353 Bacteria 11184
268 Ga0501082_0086175 3300060353 Bacteria 2709
269 Ga0530510_0011012 3300061734 Bacteria 6344
270 Ga0530510_0143695 3300061734 Bacteria 1759
271 nmdc:mga0rr50_21227_c1
272 Ga0065704_10081535
273 Ga0065707_10002527
274 Ga0070683_100000260
275 Ga0070690_100037808
276 Ga0070670_100006597
277 Ga0070670_100069785
278 Ga0070677_10011368
279 Ga0070666_10002366
280 Ga0070680_100135092
281 Ga0070660_100112594
282 Ga0070687_100011805
283 Ga0070661_100006116
284 Ga0070669_100001755
285 Ga0070669_100001918
286 Ga0070669_100019728
287 Ga0070675_100014397
288 Ga0070675_100117118
289 Ga0070671_100059994
290 Ga0070674_100033915
291 Ga0070673_100128229
292 Ga0070673_100210678
293 Ga0070659_100207008
294 Ga0070667_100001111
295 Ga0070714_100176018
296 Ga0070713_100120494
297 Ga0070700_100063998
298 Ga0070700_100086346
299 Ga0070694_100030641
300 Ga0070678_100002433
301 Ga0070678_100069269
302 Ga0070681_10033269
303 Ga0070681_10176646
304 Ga0068867_100003548
305 Ga0070699_100014713
306 Ga0070679_100024455
307 Ga0070679_100112384
308 Ga0070684_100006802
309 Ga0070672_100028841
310 Ga0070686_100018410
311 Ga0070665_100044093
312 Ga0070665_100069993
313 Ga0070704_100019156
314 Ga0068855_100065393
315 Ga0070664_100003232
316 Ga0070664_100152872
317 Ga0068857_100003496
318 Ga0068852_100204281
319 Ga0068859_100012662
320 Ga0068864_100028163
321 Ga0068864_100041375
322 Ga0068864_100043654
323 Ga0068861_100002180
324 Ga0068870_10019567
325 Ga0068858_100141613
326 Ga0068858_100167696
327 Ga0068860_100002778
328 Ga0068860_100052999
329 Ga0068862_100002600
330 Ga0068862_100005888
331 Ga0068862_100007797
332 Ga0070717_10003548
333 Ga0070712_100020835
334 Ga0097621_100071206
335 Ga0097621_100100640
336 Ga0075428_100029571
337 Ga0075428_100066743
338 Ga0075428_100198923
339 Ga0075430_100022795
340 Ga0075430_100035179
341 Ga0075430_100076217
342 Ga0075431_100016669
343 Ga0075431_100038040
344 Ga0075433_10066782
345 Ga0075434_100105003
346 Ga0075434_100146175
347 Ga0075434_100241388
348 Ga0075429_100007717
349 Ga0075429_100025559
350 Ga0075429_100059752
351 Ga0097620_100012662
352 Ga0075435_100007991
353 Ga0075435_100225242
354 Ga0105240_10000001
355 Ga0111539_10008178
356 Ga0111539_10023281
357 Ga0111539_10099957
358 Ga0111539_10109880
359 Ga0111539_10367462
360 Ga0114129_10027028
361 Ga0114129_10065089
362 Ga0114129_10081193
363 Ga0114129_10165039
364 Ga0114129_10232719
365 Ga0105248_10006587
366 Ga0105248_10016748
367 Ga0105248_10020043
368 Ga0105238_10149041
369 Ga0105249_10005802
370 Ga0105249_10021378
371 Ga0157371_10013237
372 Ga0157369_10092893
373 Ga0157369_10127085
374 Ga0157374_10013062
375 Ga0157374_10027125
376 Ga0157374_10106886
377 Ga0163162_10032969
378 Ga0163162_10200609
379 Ga0163162_10288150
380 Ga0157372_10019494
381 Ga0157375_10002289
382 Ga0163163_10002332
383 Ga0157379_10018364
384 Ga0157379_10108683
385 Ga0163161_10108556
386 Ga0213876_10059583
387 Ga0207682_10011413
388 Ga0207680_10088152
389 Ga0207643_10005384
390 Ga0207707_10039347
391 Ga0207707_10179455
392 Ga0207695_10000001
393 Ga0207693_10032581
394 Ga0207662_10023252
395 Ga0207649_10007635
396 Ga0207681_10006855
397 Ga0207694_10031713
398 Ga0207650_10052023
399 Ga0207650_10170332
400 Ga0207659_10117605
401 Ga0207644_10028348
402 Ga0207644_10134824
403 Ga0207706_10019148
404 Ga0207706_10245127
405 Ga0207691_10004148
406 Ga0207691_10007325
407 Ga0207691_10079534
408 Ga0207691_10115642
409 Ga0207711_10012468
410 Ga0207711_10036311
411 Ga0207661_10004467
412 Ga0207679_10015871
413 Ga0207679_10019927
414 Ga0207667_10015185
415 Ga0207667_10136569
416 Ga0207651_10030330
417 Ga0207651_10224765
418 Ga0207712_10016453
419 Ga0207668_10025469
420 Ga0207658_10003584
421 Ga0207703_10046033
422 Ga0207703_10046098
423 Ga0207678_10102357
424 Ga0207708_10085864
425 Ga0207641_10005952
426 Ga0207641_10084371
427 Ga0207648_10000721
428 Ga0207676_10082596
429 Ga0207674_10004013
430 Ga0207675_100000674
431 Ga0207675_100051776
432 Ga0207675_100123684
433 Ga0207683_10003539
434 Ga0207683_10004055
435 Ga0207698_10094461
436 Ga0207428_10000609
437 Ga0268266_10066160
438 Ga0268265_10000674
439 Ga0268265_10022512
440 Ga0268264_10045231
441 Ga0268264_10067012
442 Ga0265338_10073554
443 Ga0265316_10014948
444 Ga0265313_10023573
445 Ga0373956_0033249
446 Ga0373943_0005089
447 Ga0373946_0009877
448 Ga0373955_0034565
449 Ga0373924_0004164
450 Ga0373935_0022817
451 Ga0373947_0015194
452 Ga0373937_0006993
453 Ga0373937_0131756
454 Ga0436365_0717200
455 Ga0453684_0024983
456 Ga0451576_0010957
457 Ga0451576_0022037
458 Ga0495603_0044925
459 Ga0495580_0006892
460 Ga0495594_0012695
461 Ga0495608_0006306
462 Ga0495630_0002330
463 Ga0495665_0017162
464 Ga0495667_0002035
465 Ga0495667_0023593
466 Ga0495659_0003543
467 Ga0495613_0001497
468 Ga0495680_0057120
469 Ga0495684_0005119
470 Ga0495684_0016915
471 Ga0495686_0001223
472 Ga0495686_0004892
473 Ga0495602_0133438
474 Ga0496104_0002024
475 Ga0496105_0009858
476 Ga0496108_0029227
477 Ga0496109_0011191
478 Ga0496110_0007049
479 Ga0496112_0000729
480 Ga0496112_0215226
481 Ga0496115_0030551
482 Ga0501032_0003188
483 Ga0501036_0007019
484 Ga0501036_0220883
485 Ga0501037_0037262
486 Ga0501038_0002217
487 Ga0501039_0000730
488 Ga0501042_0025670
489 Ga0501042_0076802
490 Ga0501043_0020158
491 Ga0501046_0004816
492 Ga0501048_0035518
493 Ga0501048_0087182
494 Ga0501067_0009891
495 Ga0501068_0000067
496 Ga0501069_0005062
497 Ga0501070_0094762
498 Ga0501071_0054646
499 Ga0501072_0001144
500 Ga0501072_0024108
501 Ga0501074_0032225
502 Ga0501075_0033001
503 Ga0501076_0046657
504 Ga0501076_0192587
505 Ga0501080_0000129
506 Ga0501081_0002134
507 Ga0501044_0041952
508 Ga0501045_0001255
509 nmdc:mga05p37_116182_c1
510 nmdc:mga05p37_154143_c1
511 nmdc:mga05p37_20487_c1
512 nmdc:mga09592_13949_c1
513 nmdc:mga09592_187656_c1
514 nmdc:mga09592_51365_c1
515 nmdc:mga0qj67_56104_c1
516 nmdc:mga0qj67_69458_c1
517 nmdc:mga06r32_106327_c1
518 nmdc:mga06r32_19091_c1
519 nmdc:mga06r32_98425_c1
520 nmdc:mga08y16_11047_c1
521 nmdc:mga08y16_12612_c1
522 nmdc:mga08y16_238072_c1
523 nmdc:mga08y16_84664_c1
524 nmdc:mga08y16_909_c1
525 nmdc:mga0n895_152636_c1
526 nmdc:mga0n895_25661_c1
527 nmdc:mga0n895_50279_c1
528 nmdc:mga0a205_48268_c1
529 Ga0495601_0044876
530 Ga0495595_0022284
531 Ga0495619_0021923
532 Ga0500595_000004
533 Ga0501084_0003862
534 Ga0501084_0027452
535 Ga0501084_0039025
536 Ga0501082_0000692
537 Ga0501082_0005324
538 Ga0501082_0086175
539 Ga0530510_0011012
540 Ga0530510_0143695

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02518

HATPase_c

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase

389

495

0.93

PF00027

cNMP_binding

Cyclic nucleotide-binding domain

66

153

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
8dwz-assembly1.cif.gz_A ca domain of vansa histidine kinase, 7 kev data 0.9414 303 448
8dwz-assembly1.cif.gz_A ca domain of vansa histidine kinase, 7 kev data 0.9345 303 448
3a0z-assembly1.cif.gz_A catalytic domain of histidine kinase thka (tm1359) (nucleotide free form 4: isopropanol, orthorombic) 0.9296 302 447
3a0y-assembly1.cif.gz_A catalytic domain of histidine kinase thka (tm1359) (nucleotide free form 3: 1,2-propanediol, orthorombic) 0.9195 302 447
3a0w-assembly1.cif.gz_A catalytic domain of histidine kinase thka (tm1359) for mad phasing (nucleotide free form 2, orthorombic) 0.9123 302 447
ID Description Score Start End Superfamily
af_Q06067_453_606_3.30.565.10 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.9408 302 447 3.30.565.10
af_Q2FXN7_398_551_3.30.565.10 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.9254 302 447 3.30.565.10
af_P14377_310_462_3.30.565.10 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.9238 302 452 3.30.565.10
af_Q2FVQ8_303_454_3.30.565.10 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.9203 299 447 3.30.565.10
af_P0AFB5_191_349_3.30.565.10 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.9198 299 447 3.30.565.10
ID Description Score Start End GO Terms
AF-A0A3D4B1U8-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.9539 353 446 GO:0016772
AF-A0A0S8CD35-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.9504 328 450 GO:0016301
AF-A0A7V0S1H7-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.949 350 449 GO:0016772
AF-A0A1W9VQD8-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.9371 305 450 GO:0016772
AF-K2CRB4-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.9368 350 450 GO:0016301

Map