F377238

General Info

Members Datasets Scaffolds Average Seq Length
270 165 268 337

Family's Representative Sequence

Representative Sequence 3300049576|Ga0501040_0039193|Ga0501040_0039193_33_1157
Length 374
Sequence MKIGITIGDPSGIGPEVILKALQEPLDADVQPVIFGSRAVLERVERLLIKAKTDYESLVDRFEPVDALEAAANPEAIGVVEVLPNLDTTHIPFGERNERSAQLQLAAFHRAVTASQRGEIDAIVTAPWTKELFRIIDMPPVGHTEILAEAFHAPDHVMMLAGPRLRVSLVTTHLPIDSVSQHITAERIKAVVRTTAADLKRLFGIAQPDIAVCGLNPHAGEFGVMGSEEQETIGPALQELAEEFGEEVELSGPHSSDTLFARFRDGRRPFDAVVCMYHDQGLIPLKLLHFGNSANITLGLPVVRTSVDHGTAYDIAGWGVADAGSMRYAIEVAIDMARRLPARPSTAEAPESSAPGQSPQSGHLSQAPPRPGAH

Samples

Sample ID Description Type Environment
1 2671180531 Gemmata sp. SH-PL17 Isolate Unclassified
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
17 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
18 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
23 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
26 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
27 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
28 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
29 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
32 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
35 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
36 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
37 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
38 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
40 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
41 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
42 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
43 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
44 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
45 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
46 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
47 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
48 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
51 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
52 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
53 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
54 3300012510 Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.9.old.080610 Metagenome Rhizosphere
55 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
56 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
57 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
58 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
59 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
60 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
61 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
62 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300027424 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S PM (SPAdes) (version 2) Metagenome Rhizosphere
82 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
83 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
84 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
85 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
86 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
88 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
89 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
90 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
91 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
92 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
93 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
94 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
95 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
96 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
97 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
98 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
99 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
100 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
101 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
102 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
103 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
104 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
105 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
106 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
107 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
108 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
109 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
110 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
111 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
112 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
113 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
114 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
115 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
116 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
117 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
118 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
119 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
120 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
121 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
122 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
123 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
124 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
125 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
126 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
127 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
138 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
139 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
140 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
141 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
142 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
143 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
144 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
145 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
146 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
147 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
148 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
151 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
152 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
153 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
154 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
155 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
156 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
157 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
158 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
159 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
160 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
161 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
162 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
163 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
164 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
165 646564506 Arcobacter nitrofigilis DSM 7299 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.26
Metatranscriptomes 0
Isolates 0.74

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.37
Nodule 0
Rhizoplane 2.22
Rhizosphere 96.3
Stem 0
Stem Tuber 0
Unclassified 1.11

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10036194 3300003203 Bacteria 1794
2 JGI25405J52794_10000146 3300003911 Bacteria 8596
3 Ga0065715_10003223 3300005293 Bacteria 8063
4 Ga0065707_10091542 3300005295 Bacteria 3918
5 Ga0070676_10011036 3300005328 Bacteria 4910
6 Ga0070680_100012689 3300005336 Bacteria 6548
7 Ga0068868_100054340 3300005338 Bacteria 3155
8 Ga0070660_100032842 3300005339 Bacteria 3909
9 Ga0070691_10032427 3300005341 Unclassified 2455
10 Ga0070661_100003479 3300005344 Bacteria 10848
11 Ga0070675_100145409 3300005354 Bacteria 2029
12 Ga0070688_100016691 3300005365 Bacteria 4202
13 Ga0070659_100015831 3300005366 Bacteria 5654
14 Ga0070667_100039691 3300005367 Bacteria 3946
15 Ga0070694_100026430 3300005444 Bacteria 3761
16 Ga0070694_100085095 3300005444 Bacteria 2207
17 Ga0070708_100052275 3300005445 Bacteria 3623
18 Ga0070663_100004521 3300005455 Bacteria 8193
19 Ga0070678_100020218 3300005456 Bacteria 4363
20 Ga0070662_100039198 3300005457 Bacteria 3370
21 Ga0070662_100173398 3300005457 Unclassified 1695
22 Ga0070681_10005645 3300005458 Bacteria 12091
23 Ga0070681_10042276 3300005458 Bacteria 4567
24 Ga0070706_100059308 3300005467 Bacteria 3531
25 Ga0070699_100305106 3300005518 Bacteria 1428
26 Ga0070679_100090639 3300005530 Bacteria 3046
27 Ga0070697_100016603 3300005536 Bacteria 5791
28 Ga0068853_100076386 3300005539 Bacteria 2925
29 Ga0070672_100015518 3300005543 Bacteria 5427
30 Ga0070696_100091672 3300005546 Bacteria 2164
31 Ga0070704_100026103 3300005549 Bacteria 3855
32 Ga0068855_100067561 3300005563 Bacteria 4163
33 Ga0068855_100211046 3300005563 Bacteria 2182
34 Ga0070664_100002612 3300005564 Bacteria 14539
35 Ga0070664_100076176 3300005564 Bacteria 2882
36 Ga0068861_100044827 3300005719 Bacteria 3327
37 Ga0068860_100083671 3300005843 Bacteria 3035
38 Ga0068860_100295132 3300005843 Unclassified 1587
39 Ga0081455_10000428 3300005937 Bacteria 55173
40 Ga0081455_10059369 3300005937 Bacteria 3230
41 Ga0081538_10003082 3300005981 Bacteria 15855
42 Ga0081538_10092566 3300005981 Bacteria 1556
43 Ga0081539_10000245 3300005985 Bacteria 127445
44 Ga0070712_100048352 3300006175 Bacteria 2948
45 Ga0097621_100077621 3300006237 Unclassified 2757
46 Ga0075428_100020385 3300006844 Bacteria 7341
47 Ga0075428_100047080 3300006844 Bacteria 4737
48 Ga0075428_100093905 3300006844 Bacteria 3271
49 Ga0075428_100157394 3300006844 Bacteria 2467
50 Ga0075430_100016266 3300006846 Bacteria 6335
51 Ga0075430_100053882 3300006846 Bacteria 3386
52 Ga0075430_100063089 3300006846 Bacteria 3113
53 Ga0075431_100005499 3300006847 Bacteria 12511
54 Ga0075431_100043183 3300006847 Bacteria 4652
55 Ga0075431_100107192 3300006847 Bacteria 2883
56 Ga0075431_100148934 3300006847 Bacteria 2410
57 Ga0075433_10004612 3300006852 Bacteria 10752
58 Ga0075433_10053208 3300006852 Bacteria 3529
59 Ga0075434_100003900 3300006871 Bacteria 13353
60 Ga0075434_100009232 3300006871 Bacteria 9189
61 Ga0075434_100048530 3300006871 Bacteria 4212
62 Ga0075434_100222376 3300006871 Bacteria 1908
63 Ga0075434_100438205 3300006871 Bacteria 1328
64 Ga0075429_100150031 3300006880 Bacteria 2041
65 Ga0068865_100031643 3300006881 Bacteria 3529
66 Ga0075436_100004894 3300006914 Bacteria 9205
67 Ga0075436_100059152 3300006914 Bacteria 2647
68 Ga0075435_100007933 3300007076 Bacteria 7598
69 Ga0075435_100019019 3300007076 Bacteria 5234
70 Ga0075435_100043768 3300007076 Bacteria 3585
71 Ga0075435_100051526 3300007076 Bacteria 3316
72 Ga0111539_10004509 3300009094 Bacteria 18211
73 Ga0111539_10060102 3300009094 Bacteria 4505
74 Ga0111539_10120041 3300009094 Bacteria 3080
75 Ga0114129_10004080 3300009147 Bacteria 20630
76 Ga0114129_10013746 3300009147 Bacteria 11540
77 Ga0114129_10075896 3300009147 Bacteria 4680
78 Ga0114129_10093324 3300009147 Bacteria 4169
79 Ga0114129_10093435 3300009147 Bacteria 4167
80 Ga0114129_10345341 3300009147 Bacteria 1973
81 Ga0105241_10103026 3300009174 Bacteria 2272
82 Ga0105242_10240018 3300009176 Bacteria 1629
83 Ga0105249_10059335 3300009553 Bacteria 3509
84 Ga0105239_10081616 3300010375 Bacteria 3559
85 Ga0157316_1001944 3300012510 Bacteria 1352
86 Ga0157374_10069970 3300013296 Bacteria 3305
87 Ga0157378_10243103 3300013297 Bacteria 1720
88 Ga0157378_10400995 3300013297 Unclassified 1351
89 Ga0163162_10018993 3300013306 Bacteria 6741
90 Ga0157372_10046745 3300013307 Bacteria 4806
91 Ga0163163_10191858 3300014325 Bacteria 2092
92 Ga0157376_10034627 3300014969 Bacteria 4079
93 Ga0163161_10213530 3300017792 Bacteria 1491
94 Ga0207697_10013320 3300025315 Bacteria 3432
95 Ga0207645_10000928 3300025907 Bacteria 24291
96 Ga0207684_10079858 3300025910 Bacteria 2783
97 Ga0207707_10006075 3300025912 Bacteria 10570
98 Ga0207707_10032961 3300025912 Bacteria 4535
99 Ga0207660_10088083 3300025917 Bacteria 2295
100 Ga0207657_10004867 3300025919 Bacteria 14132
101 Ga0207649_10023060 3300025920 Bacteria 3601
102 Ga0207652_10013912 3300025921 Bacteria 6513
103 Ga0207652_10191767 3300025921 Bacteria 1838
104 Ga0207650_10000709 3300025925 Bacteria 25995
105 Ga0207644_10056543 3300025931 Bacteria 2831
106 Ga0207690_10008860 3300025932 Bacteria 5971
107 Ga0207706_10001213 3300025933 Bacteria 26051
108 Ga0207691_10063459 3300025940 Bacteria 3350
109 Ga0207679_10000936 3300025945 Bacteria 18659
110 Ga0207667_10105365 3300025949 Bacteria 2909
111 Ga0207651_10188394 3300025960 Unclassified 1643
112 Ga0207678_10006204 3300026067 Bacteria 10619
113 Ga0207708_10142024 3300026075 Bacteria 1884
114 Ga0207708_10260596 3300026075 Bacteria 1399
115 Ga0207683_10000467 3300026121 Bacteria 37592
116 Ga0209984_1003057 3300027424 Bacteria 1894
117 Ga0209971_1006251 3300027682 Bacteria 2821
118 Ga0209998_10009388 3300027717 Bacteria 2031
119 Ga0209974_10000094 3300027876 Bacteria 24930
120 Ga0209974_10008565 3300027876 Bacteria 3495
121 Ga0207428_10014931 3300027907 Bacteria 6729
122 Ga0207428_10078235 3300027907 Bacteria 2588
123 Ga0268265_10220031 3300028380 Bacteria 1661
124 Ga0265332_10012037 3300031238 Bacteria 3840
125 Ga0265339_10012105 3300031249 Bacteria 5284
126 Ga0265316_10002447 3300031344 Bacteria 19263
127 Ga0265316_10073630 3300031344 Bacteria 2630
128 Ga0307408_100005469 3300031548 Bacteria 8500
129 Ga0265342_10000014 3300031712 Bacteria 200596
130 Ga0307413_10010800 3300031824 Bacteria 4452
131 Ga0307410_10006407 3300031852 Bacteria 6352
132 Ga0307406_10115992 3300031901 Unclassified 1852
133 Ga0307412_10038942 3300031911 Unclassified 3065
134 Ga0307409_100013448 3300031995 Bacteria 5269
135 Ga0307409_100081282 3300031995 Bacteria 2619
136 Ga0307409_100159020 3300031995 Unclassified 1973
137 Ga0307416_100005681 3300032002 Bacteria 7708
138 Ga0307416_100009497 3300032002 Bacteria 6371
139 Ga0307415_100166729 3300032126 Unclassified 1713
140 Ga0316580_10063927 3300032139 Bacteria 1129
141 Ga0373926_0053985 3300035083 Bacteria 1455
142 Ga0373923_0121397 3300035111 Bacteria 1168
143 Ga0373939_0029598 3300035114 Bacteria 1568
144 Ga0373945_0010483 3300035116 Bacteria 3051
145 Ga0316574_0016290 3300035398 Bacteria 4330
146 Ga0316574_0181756 3300035398 Bacteria 1353
147 Ga0373931_0016186 3300035691 Bacteria 3667
148 Ga0373931_0129350 3300035691 Bacteria 1452
149 Ga0373935_0074225 3300035692 Bacteria 2198
150 Ga0373937_0315499 3300036401 Bacteria 1479
151 Ga0395900_0022624 3300037418 Bacteria 6433
152 Ga0395898_0180158 3300037466 Bacteria 2020
153 Ga0395905_0000145 3300037471 Bacteria 116795
154 Ga0395905_0001580 3300037471 Bacteria 27185
155 Ga0395905_0009663 3300037471 Bacteria 9414
156 Ga0395901_0211281 3300038443 Bacteria 2031
157 Ga0451577_0000055 3300042876 Bacteria 276883
158 Ga0451577_0003454 3300042876 Bacteria 17586
159 Ga0451577_0004304 3300042876 Bacteria 15119
160 Ga0451577_0060167 3300042876 Bacteria 3386
161 Ga0453683_0000001 3300044673 Bacteria 1384965
162 Ga0453683_0000009 3300044673 Bacteria 491115
163 Ga0453683_0000577 3300044673 Bacteria 40575
164 Ga0453683_0002668 3300044673 Bacteria 13645
165 Ga0453684_0000183 3300044712 Bacteria 277052
166 Ga0453684_0000231 3300044712 Bacteria 241070
167 Ga0453684_0001373 3300044712 Bacteria 70489
168 Ga0453684_0005824 3300044712 Bacteria 23978
169 Ga0453684_0008165 3300044712 Bacteria 18891
170 Ga0453684_0014526 3300044712 Bacteria 12575
171 Ga0453684_0021787 3300044712 Bacteria 9549
172 Ga0453684_0028591 3300044712 Bacteria 7949
173 Ga0453684_0032396 3300044712 Bacteria 7316
174 Ga0453684_0034264 3300044712 Bacteria 7052
175 Ga0453684_0039171 3300044712 Bacteria 6465
176 Ga0453684_0078035 3300044712 Bacteria 4147
177 Ga0453684_0097735 3300044712 Bacteria 3603
178 Ga0453684_0121433 3300044712 Bacteria 3153
179 Ga0453684_0185546 3300044712 Bacteria 2438
180 Ga0451576_0001078 3300045051 Bacteria 50041
181 Ga0495580_0044230 3300046472 Bacteria 3168
182 Ga0495639_0149343 3300046475 Bacteria 1127
183 Ga0495594_0046309 3300046499 Bacteria 2389
184 Ga0495598_0034634 3300046537 Bacteria 1441
185 Ga0495658_0165980 3300046683 Bacteria 1364
186 Ga0496100_0180907 3300048903 Bacteria 1525
187 Ga0496106_0065467 3300048909 Bacteria 2767
188 Ga0496109_0246059 3300048912 Unclassified 1684
189 Ga0496112_0047105 3300048915 Bacteria 4229
190 Ga0496112_0053971 3300048915 Bacteria 3948
191 Ga0496115_0220353 3300048918 Unclassified 1566
192 Ga0496126_0042555 3300048929 Bacteria 4195
193 Ga0501031_0024101 3300049568 Bacteria 3967
194 Ga0501033_0037002 3300049570 Bacteria 3655
195 Ga0501037_0146550 3300049573 Bacteria 1688
196 Ga0501038_0015590 3300049574 Bacteria 6908
197 Ga0501038_0023793 3300049574 Bacteria 5472
198 Ga0501040_0039193 3300049576 Bacteria 3222
199 Ga0501040_0042535 3300049576 Bacteria 3095
200 Ga0501041_0253732 3300049577 Bacteria 1106
201 Ga0501042_0000928 3300049578 Bacteria 16503
202 Ga0501043_0027510 3300049579 Bacteria 4463
203 Ga0501046_0002250 3300049580 Bacteria 18209
204 Ga0501046_0121607 3300049580 Bacteria 1986
205 Ga0501048_0015809 3300049582 Bacteria 5567
206 Ga0501070_0139114 3300049586 Bacteria 2005
207 Ga0501070_0200842 3300049586 Bacteria 1637
208 Ga0501071_0000518 3300049587 Bacteria 19663
209 Ga0501072_0002815 3300049588 Bacteria 13054
210 Ga0501072_0015688 3300049588 Bacteria 5807
211 Ga0501074_0116468 3300049590 Bacteria 1912
212 Ga0501075_0007429 3300049591 Bacteria 7599
213 Ga0501075_0008624 3300049591 Bacteria 7107
214 Ga0501075_0090181 3300049591 Bacteria 2325
215 Ga0501076_0003383 3300049592 Bacteria 11202
216 Ga0501077_0000169 3300049593 Bacteria 37313
217 Ga0501077_0059064 3300049593 Bacteria 2435
218 Ga0501077_0232568 3300049593 Bacteria 1171
219 Ga0501079_0048219 3300049741 Bacteria 3287
220 Ga0501079_0068720 3300049741 Bacteria 2734
221 Ga0501080_0009157 3300049742 Bacteria 9015
222 Ga0501081_0000045 3300049743 Bacteria 47062
223 Ga0501081_0002076 3300049743 Bacteria 12499
224 Ga0501083_0202249 3300049744 Bacteria 1295
225 Ga0501035_0240316 3300049822 Bacteria 1540
226 Ga0501035_0246508 3300049822 Bacteria 1518
227 Ga0501044_0245815 3300049823 Bacteria 1732
228 Ga0501044_0640039 3300049823 Bacteria 953
229 Ga0501045_0005629 3300049824 Bacteria 8673
230 Ga0501045_0301342 3300049824 Bacteria 1193
231 nmdc:mga05p37_20464_c1 3300050507 Bacteria 8004
232 nmdc:mga05p37_23004_c1 3300050507 Bacteria 7560
233 nmdc:mga05p37_23322_c1 3300050507 Bacteria 7510
234 nmdc:mga05p37_3993_c1 3300050507 Bacteria 17256
235 nmdc:mga05p37_452587_c1 3300050507 Bacteria 1485
236 nmdc:mga05p37_58547_c1 3300050507 Bacteria 4745
237 nmdc:mga09592_49510_c1 3300050508 Bacteria 3542
238 nmdc:mga0qj67_15909_c1 3300050509 Bacteria 5697
239 nmdc:mga0qj67_52706_c1 3300050509 Bacteria 3220
240 nmdc:mga06r32_114856_c1 3300050510 Bacteria 2651
241 nmdc:mga06r32_82242_c1 3300050510 Bacteria 3137
242 nmdc:mga06r32_97424_c1 3300050510 Bacteria 2882
243 nmdc:mga08y16_165183_c1 3300050511 Bacteria 2300
244 nmdc:mga08y16_87827_c1 3300050511 Bacteria 3240
245 nmdc:mga0n895_105780_c1 3300050512 Bacteria 2827
246 nmdc:mga0n895_4014_c1 3300050512 Bacteria 11975
247 nmdc:mga0n895_4508_c1 3300050512 Bacteria 11453
248 nmdc:mga0n895_61314_c1 3300050512 Bacteria 3713
249 nmdc:mga0n895_99770_c1 3300050512 Bacteria 2912
250 nmdc:mga0rr50_13182_c1 3300050513 Bacteria 5373
251 nmdc:mga0rr50_16120_c1 3300050513 Bacteria 4954
252 nmdc:mga0rr50_16149_c1 3300050513 Bacteria 4949
253 nmdc:mga08x19_23113_c1 3300050514 Bacteria 3856
254 nmdc:mga08x19_5536_c1 3300050514 Bacteria 2669
255 nmdc:mga08x19_80726_c1 3300050514 Bacteria 2135
256 nmdc:mga0a205_32053_c1 3300050515 Bacteria 5039
257 nmdc:mga0a205_33057_c1 3300050515 Bacteria 4960
258 nmdc:mga0a205_5940_c1 3300050515 Bacteria 11006
259 nmdc:mga0a205_8876_c2 3300050515 Bacteria 5147
260 Ga0500643_000698 3300053087 Bacteria 22326
261 Ga0501084_0009303 3300054114 Bacteria 8132
262 Ga0590071_002381 3300059421 Bacteria 4739
263 Ga0501082_0007631 3300060353 Bacteria 9331
264 Ga0501082_0027444 3300060353 Bacteria 4901
265 Ga0501082_0095632 3300060353 Bacteria 2567
266 Ga0530510_0056952 3300061734 Bacteria 2824
267 Ga0530510_0076779 3300061734 Bacteria 2427
268 Ga0530510_0082558 3300061734 Unclassified 2340

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049823 Ga0501044_0640039 Ga0501044_0640039_101_922 266
2 iso_pu_bacteria 646564506 646813124 285
3 3300044712 Ga0453684_0005824 Ga0453684_0005824_23055_23948 286
4 3300006844 Ga0075428_100093905 Ga0075428_1000939052 290
5 3300049592 Ga0501076_0003383 Ga0501076_0003383_19_945 290
6 3300031238 Ga0265332_10012037 Ga0265332_100120372 293
7 3300031249 Ga0265339_10012105 Ga0265339_100121056 293
8 3300031344 Ga0265316_10002447 Ga0265316_100024475 293
9 3300031344 Ga0265316_10073630 Ga0265316_100736303 293
10 3300031712 Ga0265342_10000014 Ga0265342_1000001455 293
11 3300044712 Ga0453684_0032396 Ga0453684_0032396_1831_2892 297
12 3300037418 Ga0395900_0022624 Ga0395900_0022624_3697_4806 298
13 3300037466 Ga0395898_0180158 Ga0395898_0180158_716_1825 298
14 3300037471 Ga0395905_0009663 Ga0395905_0009663_4604_5713 298
15 3300053087 Ga0500643_000698 Ga0500643_000698_579_1574 299
16 3300006847 Ga0075431_100005499 Ga0075431_1000054993 300
17 3300044673 Ga0453683_0000001 Ga0453683_0000001_758772_759776 300
18 3300044712 Ga0453684_0014526 Ga0453684_0014526_3436_4440 300
19 3300045051 Ga0451576_0001078 Ga0451576_0001078_42151_43155 300
20 3300005563 Ga0068855_100211046 Ga0068855_1002110462 301
21 3300044712 Ga0453684_0034264 Ga0453684_0034264_3622_4674 302
22 3300044712 Ga0453684_0008165 Ga0453684_0008165_4925_5902 304
23 3300049822 Ga0501035_0240316 Ga0501035_0240316_557_1522 304
24 3300048929 Ga0496126_0042555 Ga0496126_0042555_947_1981 305
25 3300037471 Ga0395905_0000145 Ga0395905_0000145_64232_65281 306
26 3300038443 Ga0395901_0211281 Ga0395901_0211281_370_1404 306
27 3300048903 Ga0496100_0180907 Ga0496100_0180907_145_1179 306
28 3300048918 Ga0496115_0220353 Ga0496115_0220353_427_1458 306
29 3300027424 Ga0209984_1003057 Ga0209984_10030572 307
30 3300027876 Ga0209974_10008565 Ga0209974_100085653 307
31 3300037471 Ga0395905_0001580 Ga0395905_0001580_24110_25144 307
32 3300044673 Ga0453683_0000577 Ga0453683_0000577_19717_20739 307
33 3300049574 Ga0501038_0023793 Ga0501038_0023793_4485_5450 307
34 3300050510 nmdc:mga06r32_114856_c1 nmdc:mga06r32_114856_c1_431_1453 307
35 3300042876 Ga0451577_0060167 Ga0451577_0060167_2235_3203 308
36 3300050513 nmdc:mga0rr50_13182_c1 nmdc:mga0rr50_13182_c1_4385_5359 308
37 3300032139 Ga0316580_10063927 Ga0316580_100639271 311
38 3300042876 Ga0451577_0003454 Ga0451577_0003454_11369_12346 311
39 3300042876 Ga0451577_0004304 Ga0451577_0004304_1198_2172 311
40 3300044673 Ga0453683_0000009 Ga0453683_0000009_313026_314003 311
41 3300044673 Ga0453683_0002668 Ga0453683_0002668_7940_8941 311
42 3300044712 Ga0453684_0039171 Ga0453684_0039171_2045_3019 311
43 3300044712 Ga0453684_0185546 Ga0453684_0185546_111_1142 311
44 3300044712 Ga0453684_0078035 Ga0453684_0078035_941_1942 312
45 iso_pu_bacteria 2671180531 2673162105 312
46 3300044712 Ga0453684_0021787 Ga0453684_0021787_2528_3544 313
47 3300044712 Ga0453684_0097735 Ga0453684_0097735_443_1453 313
48 3300049586 Ga0501070_0139114 Ga0501070_0139114_431_1435 313
49 3300049822 Ga0501035_0246508 Ga0501035_0246508_458_1462 313
50 3300049823 Ga0501044_0245815 Ga0501044_0245815_412_1416 313
51 3300050512 nmdc:mga0n895_99770_c1 nmdc:mga0n895_99770_c1_175_1167 313
52 3300006844 Ga0075428_100020385 Ga0075428_1000203853 314
53 3300006847 Ga0075431_100107192 Ga0075431_1001071922 314
54 3300006871 Ga0075434_100222376 Ga0075434_1002223762 314
55 3300012510 Ga0157316_1001944 Ga0157316_10019441 314
56 3300017792 Ga0163161_10213530 Ga0163161_102135301 314
57 3300049576 Ga0501040_0042535 Ga0501040_0042535_737_1729 314
58 3300049577 Ga0501041_0253732 Ga0501041_0253732_25_1017 314
59 3300049578 Ga0501042_0000928 Ga0501042_0000928_9857_10864 314
60 3300049580 Ga0501046_0002250 Ga0501046_0002250_11341_12348 314
61 3300049580 Ga0501046_0121607 Ga0501046_0121607_339_1331 314
62 3300049587 Ga0501071_0000518 Ga0501071_0000518_13188_14195 314
63 3300049588 Ga0501072_0002815 Ga0501072_0002815_10182_11189 314
64 3300049588 Ga0501072_0015688 Ga0501072_0015688_3568_4560 314
65 3300049590 Ga0501074_0116468 Ga0501074_0116468_623_1630 314
66 3300049591 Ga0501075_0007429 Ga0501075_0007429_2825_3817 314
67 3300049591 Ga0501075_0008624 Ga0501075_0008624_5134_6141 314
68 3300049593 Ga0501077_0000169 Ga0501077_0000169_23005_24012 314
69 3300049741 Ga0501079_0048219 Ga0501079_0048219_660_1652 314
70 3300049741 Ga0501079_0068720 Ga0501079_0068720_1535_2542 314
71 3300049743 Ga0501081_0000045 Ga0501081_0000045_20717_21724 314
72 3300049743 Ga0501081_0002076 Ga0501081_0002076_3479_4471 314
73 3300049744 Ga0501083_0202249 Ga0501083_0202249_98_1105 314
74 3300049824 Ga0501045_0005629 Ga0501045_0005629_6292_7299 314
75 3300049824 Ga0501045_0301342 Ga0501045_0301342_38_1030 314
76 3300054114 Ga0501084_0009303 Ga0501084_0009303_6675_7682 314
77 3300060353 Ga0501082_0007631 Ga0501082_0007631_2934_3926 314
78 3300009147 Ga0114129_10345341 Ga0114129_103453411 315
79 3300009553 Ga0105249_10059335 Ga0105249_100593352 315
80 3300014325 Ga0163163_10191858 Ga0163163_101918582 315
81 3300026075 Ga0207708_10142024 Ga0207708_101420242 315
82 3300006852 Ga0075433_10004612 Ga0075433_100046123 316
83 3300006871 Ga0075434_100003900 Ga0075434_1000039006 316
84 3300006914 Ga0075436_100004894 Ga0075436_1000048942 316
85 3300007076 Ga0075435_100043768 Ga0075435_1000437682 316
86 3300044712 Ga0453684_0001373 Ga0453684_0001373_10427_11488 316
87 3300050512 nmdc:mga0n895_4014_c1 nmdc:mga0n895_4014_c1_4392_5393 316
88 3300050512 nmdc:mga0n895_61314_c1 nmdc:mga0n895_61314_c1_1386_2423 316
89 3300050514 nmdc:mga08x19_23113_c1 nmdc:mga08x19_23113_c1_1707_2744 316
90 3300050515 nmdc:mga0a205_33057_c1 nmdc:mga0a205_33057_c1_1227_2264 316
91 3300050515 nmdc:mga0a205_5940_c1 nmdc:mga0a205_5940_c1_6544_7545 316
92 3300035398 Ga0316574_0016290 Ga0316574_0016290_389_1399 317
93 3300035398 Ga0316574_0181756 Ga0316574_0181756_43_1092 317
94 3300044712 Ga0453684_0121433 Ga0453684_0121433_738_1751 317
95 3300005445 Ga0070708_100052275 Ga0070708_1000522752 319
96 3300005467 Ga0070706_100059308 Ga0070706_1000593083 319
97 3300025910 Ga0207684_10079858 Ga0207684_100798583 319
98 3300036401 Ga0373937_0315499 Ga0373937_0315499_102_1115 319
99 3300042876 Ga0451577_0000055 Ga0451577_0000055_103416_104477 319
100 3300044712 Ga0453684_0000183 Ga0453684_0000183_172690_173751 319
101 3300044712 Ga0453684_0000231 Ga0453684_0000231_151560_152651 319
102 3300006847 Ga0075431_100148934 Ga0075431_1001489342 320
103 3300031548 Ga0307408_100005469 Ga0307408_1000054694 320
104 3300031901 Ga0307406_10115992 Ga0307406_101159922 320
105 3300031911 Ga0307412_10038942 Ga0307412_100389422 320
106 3300031995 Ga0307409_100159020 Ga0307409_1001590202 320
107 3300032002 Ga0307416_100009497 Ga0307416_1000094973 320
108 3300032126 Ga0307415_100166729 Ga0307415_1001667292 320
109 3300044712 Ga0453684_0028591 Ga0453684_0028591_6299_7354 320
110 3300049576 Ga0501040_0039193 Ga0501040_0039193_33_1157 320
111 3300005328 Ga0070676_10011036 Ga0070676_100110363 321
112 3300005336 Ga0070680_100012689 Ga0070680_1000126891 321
113 3300005338 Ga0068868_100054340 Ga0068868_1000543402 321
114 3300005341 Ga0070691_10032427 Ga0070691_100324272 321
115 3300005367 Ga0070667_100039691 Ga0070667_1000396913 321
116 3300005457 Ga0070662_100173398 Ga0070662_1001733982 321
117 3300005536 Ga0070697_100016603 Ga0070697_1000166033 321
118 3300005539 Ga0068853_100076386 Ga0068853_1000763862 321
119 3300005543 Ga0070672_100015518 Ga0070672_1000155183 321
120 3300005563 Ga0068855_100067561 Ga0068855_1000675613 321
121 3300006871 Ga0075434_100438205 Ga0075434_1004382052 321
122 3300007076 Ga0075435_100051526 Ga0075435_1000515262 321
123 3300010375 Ga0105239_10081616 Ga0105239_100816163 321
124 3300013296 Ga0157374_10069970 Ga0157374_100699703 321
125 3300013307 Ga0157372_10046745 Ga0157372_100467453 321
126 3300025907 Ga0207645_10000928 Ga0207645_100009289 321
127 3300025933 Ga0207706_10001213 Ga0207706_100012139 321
128 3300025940 Ga0207691_10063459 Ga0207691_100634592 321
129 3300025949 Ga0207667_10105365 Ga0207667_101053652 321
130 3300048909 Ga0496106_0065467 Ga0496106_0065467_1539_2561 321
131 3300003911 JGI25405J52794_10000146 JGI25405J52794_100001467 322
132 3300005293 Ga0065715_10003223 Ga0065715_100032236 322
133 3300005295 Ga0065707_10091542 Ga0065707_100915423 322
134 3300005339 Ga0070660_100032842 Ga0070660_1000328422 322
135 3300005344 Ga0070661_100003479 Ga0070661_1000034794 322
136 3300005354 Ga0070675_100145409 Ga0070675_1001454091 322
137 3300005366 Ga0070659_100015831 Ga0070659_1000158313 322
138 3300005444 Ga0070694_100026430 Ga0070694_1000264302 322
139 3300005444 Ga0070694_100085095 Ga0070694_1000850951 322
140 3300005455 Ga0070663_100004521 Ga0070663_1000045212 322
141 3300005456 Ga0070678_100020218 Ga0070678_1000202183 322
142 3300005457 Ga0070662_100039198 Ga0070662_1000391982 322
143 3300005458 Ga0070681_10005645 Ga0070681_100056459 322
144 3300005458 Ga0070681_10042276 Ga0070681_100422763 322
145 3300005518 Ga0070699_100305106 Ga0070699_1003051062 322
146 3300005530 Ga0070679_100090639 Ga0070679_1000906392 322
147 3300005546 Ga0070696_100091672 Ga0070696_1000916722 322
148 3300005564 Ga0070664_100002612 Ga0070664_10000261210 322
149 3300005564 Ga0070664_100076176 Ga0070664_1000761762 322
150 3300005843 Ga0068860_100295132 Ga0068860_1002951321 322
151 3300005937 Ga0081455_10000428 Ga0081455_1000042831 322
152 3300005937 Ga0081455_10059369 Ga0081455_100593691 322
153 3300005981 Ga0081538_10003082 Ga0081538_1000308213 322
154 3300005981 Ga0081538_10092566 Ga0081538_100925662 322
155 3300006175 Ga0070712_100048352 Ga0070712_1000483523 322
156 3300006237 Ga0097621_100077621 Ga0097621_1000776212 322
157 3300006844 Ga0075428_100047080 Ga0075428_1000470803 322
158 3300006844 Ga0075428_100157394 Ga0075428_1001573942 322
159 3300006846 Ga0075430_100016266 Ga0075430_1000162664 322
160 3300006846 Ga0075430_100053882 Ga0075430_1000538823 322
161 3300006846 Ga0075430_100063089 Ga0075430_1000630893 322
162 3300006847 Ga0075431_100043183 Ga0075431_1000431833 322
163 3300006852 Ga0075433_10053208 Ga0075433_100532082 322
164 3300006871 Ga0075434_100009232 Ga0075434_1000092325 322
165 3300006871 Ga0075434_100048530 Ga0075434_1000485303 322
166 3300006880 Ga0075429_100150031 Ga0075429_1001500312 322
167 3300006881 Ga0068865_100031643 Ga0068865_1000316432 322
168 3300006914 Ga0075436_100059152 Ga0075436_1000591522 322
169 3300007076 Ga0075435_100007933 Ga0075435_1000079336 322
170 3300007076 Ga0075435_100019019 Ga0075435_1000190193 322
171 3300009094 Ga0111539_10004509 Ga0111539_100045095 322
172 3300009094 Ga0111539_10060102 Ga0111539_100601023 322
173 3300009094 Ga0111539_10120041 Ga0111539_101200411 322
174 3300009147 Ga0114129_10004080 Ga0114129_100040807 322
175 3300009147 Ga0114129_10013746 Ga0114129_100137467 322
176 3300009147 Ga0114129_10075896 Ga0114129_100758962 322
177 3300009147 Ga0114129_10093324 Ga0114129_100933243 322
178 3300009147 Ga0114129_10093435 Ga0114129_100934353 322
179 3300009174 Ga0105241_10103026 Ga0105241_101030262 322
180 3300009176 Ga0105242_10240018 Ga0105242_102400181 322
181 3300013297 Ga0157378_10243103 Ga0157378_102431032 322
182 3300013297 Ga0157378_10400995 Ga0157378_104009952 322
183 3300013306 Ga0163162_10018993 Ga0163162_100189933 322
184 3300014969 Ga0157376_10034627 Ga0157376_100346272 322
185 3300025315 Ga0207697_10013320 Ga0207697_100133203 322
186 3300025912 Ga0207707_10006075 Ga0207707_100060754 322
187 3300025912 Ga0207707_10032961 Ga0207707_100329612 322
188 3300025917 Ga0207660_10088083 Ga0207660_100880832 322
189 3300025919 Ga0207657_10004867 Ga0207657_100048672 322
190 3300025920 Ga0207649_10023060 Ga0207649_100230602 322
191 3300025921 Ga0207652_10013912 Ga0207652_100139124 322
192 3300025921 Ga0207652_10191767 Ga0207652_101917671 322
193 3300025925 Ga0207650_10000709 Ga0207650_1000070914 322
194 3300025931 Ga0207644_10056543 Ga0207644_100565432 322
195 3300025932 Ga0207690_10008860 Ga0207690_100088603 322
196 3300025945 Ga0207679_10000936 Ga0207679_100009367 322
197 3300025960 Ga0207651_10188394 Ga0207651_101883942 322
198 3300026067 Ga0207678_10006204 Ga0207678_100062043 322
199 3300026075 Ga0207708_10260596 Ga0207708_102605961 322
200 3300026121 Ga0207683_10000467 Ga0207683_1000046742 322
201 3300027682 Ga0209971_1006251 Ga0209971_10062512 322
202 3300027717 Ga0209998_10009388 Ga0209998_100093882 322
203 3300027876 Ga0209974_10000094 Ga0209974_100000947 322
204 3300027907 Ga0207428_10014931 Ga0207428_100149313 322
205 3300027907 Ga0207428_10078235 Ga0207428_100782352 322
206 3300031824 Ga0307413_10010800 Ga0307413_100108003 322
207 3300031852 Ga0307410_10006407 Ga0307410_100064074 322
208 3300031995 Ga0307409_100013448 Ga0307409_1000134483 322
209 3300031995 Ga0307409_100081282 Ga0307409_1000812822 322
210 3300032002 Ga0307416_100005681 Ga0307416_1000056813 322
211 3300035083 Ga0373926_0053985 Ga0373926_0053985_105_1124 322
212 3300035111 Ga0373923_0121397 Ga0373923_0121397_121_1140 322
213 3300035114 Ga0373939_0029598 Ga0373939_0029598_14_1039 322
214 3300035116 Ga0373945_0010483 Ga0373945_0010483_1793_2812 322
215 3300035691 Ga0373931_0016186 Ga0373931_0016186_360_1385 322
216 3300035691 Ga0373931_0129350 Ga0373931_0129350_368_1387 322
217 3300035692 Ga0373935_0074225 Ga0373935_0074225_693_1712 322
218 3300046472 Ga0495580_0044230 Ga0495580_0044230_969_1988 322
219 3300046475 Ga0495639_0149343 Ga0495639_0149343_72_1091 322
220 3300046499 Ga0495594_0046309 Ga0495594_0046309_1104_2123 322
221 3300046537 Ga0495598_0034634 Ga0495598_0034634_249_1274 322
222 3300046683 Ga0495658_0165980 Ga0495658_0165980_233_1252 322
223 3300048912 Ga0496109_0246059 Ga0496109_0246059_285_1310 322
224 3300048915 Ga0496112_0047105 Ga0496112_0047105_2665_3690 322
225 3300048915 Ga0496112_0053971 Ga0496112_0053971_1728_2753 322
226 3300049568 Ga0501031_0024101 Ga0501031_0024101_2287_3312 322
227 3300049570 Ga0501033_0037002 Ga0501033_0037002_1159_2235 322
228 3300049573 Ga0501037_0146550 Ga0501037_0146550_109_1134 322
229 3300049574 Ga0501038_0015590 Ga0501038_0015590_248_1324 322
230 3300049579 Ga0501043_0027510 Ga0501043_0027510_775_1851 322
231 3300049582 Ga0501048_0015809 Ga0501048_0015809_3771_4811 322
232 3300049586 Ga0501070_0200842 Ga0501070_0200842_581_1606 322
233 3300049591 Ga0501075_0090181 Ga0501075_0090181_436_1461 322
234 3300049593 Ga0501077_0059064 Ga0501077_0059064_1145_2170 322
235 3300049593 Ga0501077_0232568 Ga0501077_0232568_11_1036 322
236 3300049742 Ga0501080_0009157 Ga0501080_0009157_684_1760 322
237 3300050507 nmdc:mga05p37_20464_c1 nmdc:mga05p37_20464_c1_3589_4614 322
238 3300050507 nmdc:mga05p37_23004_c1 nmdc:mga05p37_23004_c1_5951_6976 322
239 3300050507 nmdc:mga05p37_23322_c1 nmdc:mga05p37_23322_c1_4890_5915 322
240 3300050507 nmdc:mga05p37_3993_c1 nmdc:mga05p37_3993_c1_5935_6960 322
241 3300050507 nmdc:mga05p37_452587_c1 nmdc:mga05p37_452587_c1_305_1333 322
242 3300050507 nmdc:mga05p37_58547_c1 nmdc:mga05p37_58547_c1_487_1512 322
243 3300050508 nmdc:mga09592_49510_c1 nmdc:mga09592_49510_c1_733_1758 322
244 3300050509 nmdc:mga0qj67_15909_c1 nmdc:mga0qj67_15909_c1_135_1160 322
245 3300050509 nmdc:mga0qj67_52706_c1 nmdc:mga0qj67_52706_c1_2126_3151 322
246 3300050510 nmdc:mga06r32_82242_c1 nmdc:mga06r32_82242_c1_1088_2113 322
247 3300050510 nmdc:mga06r32_97424_c1 nmdc:mga06r32_97424_c1_1657_2682 322
248 3300050511 nmdc:mga08y16_165183_c1 nmdc:mga08y16_165183_c1_1249_2274 322
249 3300050511 nmdc:mga08y16_87827_c1 nmdc:mga08y16_87827_c1_1860_2885 322
250 3300050512 nmdc:mga0n895_105780_c1 nmdc:mga0n895_105780_c1_289_1314 322
251 3300050512 nmdc:mga0n895_4508_c1 nmdc:mga0n895_4508_c1_1236_2261 322
252 3300050513 nmdc:mga0rr50_16120_c1 nmdc:mga0rr50_16120_c1_2484_3509 322
253 3300050513 nmdc:mga0rr50_16149_c1 nmdc:mga0rr50_16149_c1_369_1394 322
254 3300050514 nmdc:mga08x19_5536_c1 nmdc:mga08x19_5536_c1_488_1513 322
255 3300050514 nmdc:mga08x19_80726_c1 nmdc:mga08x19_80726_c1_20_1045 322
256 3300050515 nmdc:mga0a205_32053_c1 nmdc:mga0a205_32053_c1_3871_4896 322
257 3300050515 nmdc:mga0a205_8876_c2 nmdc:mga0a205_8876_c2_2244_3269 322
258 3300059421 Ga0590071_002381 Ga0590071_002381_705_1730 322
259 3300060353 Ga0501082_0027444 Ga0501082_0027444_843_1919 322
260 3300060353 Ga0501082_0095632 Ga0501082_0095632_1201_2226 322
261 3300061734 Ga0530510_0056952 Ga0530510_0056952_1487_2512 322
262 3300061734 Ga0530510_0076779 Ga0530510_0076779_89_1114 322
263 3300061734 Ga0530510_0082558 Ga0530510_0082558_88_1113 322
264 3300003203 JGI25406J46586_10036194 JGI25406J46586_100361942 323
265 3300005365 Ga0070688_100016691 Ga0070688_1000166913 323
266 3300005549 Ga0070704_100026103 Ga0070704_1000261032 323
267 3300005719 Ga0068861_100044827 Ga0068861_1000448272 323
268 3300005843 Ga0068860_100083671 Ga0068860_1000836713 323
269 3300005985 Ga0081539_10000245 Ga0081539_1000024599 323
270 3300028380 Ga0268265_10220031 Ga0268265_102200312 323

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04166

PdxA

Pyridoxal phosphate biosynthetic protein PdxA

28

333

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
6xmy-assembly1.cif.gz_A crystal structure of 4-hydroxythreonine-4-phosphate dehydrogenase from legionella pneumophila in complex with nad 0.9158 1 321
1r8k-assembly1.cif.gz_B pdxa protein; nad-dependent dehydrogenase/carboxylase; subunit of pyridoxine phosphate biosynthetic protein pdxj-pdxa [salmonella typhimurium] 0.9083 1 322
1ps6-assembly1.cif.gz_A crystal structure of e.coli pdxa 0.9029 3 322
1r8k-assembly1.cif.gz_B pdxa protein; nad-dependent dehydrogenase/carboxylase; subunit of pyridoxine phosphate biosynthetic protein pdxj-pdxa [salmonella typhimurium] 0.8975 1 322
6xmy-assembly1.cif.gz_A crystal structure of 4-hydroxythreonine-4-phosphate dehydrogenase from legionella pneumophila in complex with nad 0.8913 1 321
ID Description Score Start End Superfamily
1r8kA00 Alpha Beta;3-Layer(aba) Sandwich;Isopropylmalate Dehydrogenase;Isopropylmalate Dehydrogenase 0.9084 1 322 3.40.718.10
1r8kA00 Alpha Beta;3-Layer(aba) Sandwich;Isopropylmalate Dehydrogenase;Isopropylmalate Dehydrogenase 0.8894 1 322 3.40.718.10
2hi1B00 Alpha Beta;3-Layer(aba) Sandwich;Isopropylmalate Dehydrogenase;Isopropylmalate Dehydrogenase 0.8199 3 323 3.40.718.10
2hi1B00 Alpha Beta;3-Layer(aba) Sandwich;Isopropylmalate Dehydrogenase;Isopropylmalate Dehydrogenase 0.8152 3 323 3.40.718.10
4jqpB00 Alpha Beta;3-Layer(aba) Sandwich;Isopropylmalate Dehydrogenase;Isopropylmalate Dehydrogenase 0.7767 1 322 3.40.718.10
ID Description Score Start End GO Terms
AF-A0A0S8CRR1-F1-model_v4 4-hydroxythreonine-4-phosphate dehydrogenase 0.9357 3 192 GO:0016491
GO:0046872
GO:0051287
AF-A0A7R9NE74-F1-model_v4 deleted 0.9318 1 289
AF-A0A0L0KNN6-F1-model_v4 deleted 0.9314 9 186
AF-A0A7X8BKQ6-F1-model_v4 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 0.9303 5 321 GO:0016491
GO:0046872
GO:0051287
AF-A0A661R0L1-F1-model_v4 4-hydroxythreonine-4-phosphate dehydrogenase 0.9288 3 144 GO:0016491
GO:0046872
GO:0051287

Feature Viewer

pLDDT pTM Quality
90.81 0.89 High
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Predicted Structure (AlphaFold2)

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