F376312

General Info

Members Datasets Scaffolds Average Seq Length
269 157 256 146

Family's Representative Sequence

Representative Sequence 3300031727|Ga0316576_10038477|Ga0316576_100384772
Length 156
Sequence MNKTGKFLIRVYGLVVNKKNEILLSDEFELNMKMTKFPGGGLEFGEGLIDGLRREFREECNNQEIKNIRHFYTTDFFQAAKFFENTQLISVYYLVALKDPIRFKISDKAFNFKVGGPITQSFRWEKINTLKEDDITFPIDKFVLKKLKKTLDVKNH

Samples

Sample ID Description Type Environment
1 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
2 2721755487 Sphingobacterium sp. B29 Isolate Rhizosphere
3 2887375801 Parapusillimonas sp. SGNA-6 Isolate Rhizosphere
4 2890737413 Parapedobacter sp. SGR-10 Isolate Rhizosphere
5 2896317667 Sphingobacterium sp. SGR-19 Isolate Rhizosphere
6 2896344016 Sphingobacterium sp. SGL-16 Isolate Rhizosphere
7 2898713307 Sphingobacterium sp. SGG-5 Isolate Rhizosphere
8 2904780799 Sphingobacterium sp. 1304 Isolate Rhizosphere
9 2919177583 Sphingobacterium sp. 2149 Isolate Rhizosphere
10 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
11 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
12 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
13 3003233435 Sphingobacterium shayense CrR18 Isolate Unclassified
14 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
15 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
16 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
17 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
18 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
19 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
20 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
21 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
22 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
23 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
24 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
25 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
26 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
27 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
28 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
29 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
30 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
31 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
32 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
33 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
34 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
35 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
36 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
37 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
38 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
39 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
40 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
41 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
42 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
43 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
44 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
45 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
46 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
47 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
48 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
49 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
50 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
51 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
52 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
53 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
54 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
55 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
56 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
57 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
58 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
59 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
60 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
61 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
62 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
63 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
64 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
65 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
66 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
67 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
68 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
69 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
70 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
71 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
72 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
73 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
74 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
75 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
76 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
77 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
78 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
79 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
80 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
82 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
83 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
84 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
85 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
117 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
118 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
119 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
120 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
121 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
122 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
123 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
124 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
125 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
126 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
127 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
128 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
129 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
130 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
131 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
132 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
133 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
134 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
135 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
136 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
137 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
138 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
139 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
140 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
141 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
142 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
143 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
144 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
145 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
146 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
147 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
148 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
149 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
150 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
151 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
152 3300049514 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A25_B_5_drought Metagenome Rhizosphere
153 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
154 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
155 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
156 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
157 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.17
Metatranscriptomes 0
Isolates 4.83

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.58
Nodule 0
Rhizoplane 0.74
Rhizosphere 84.39
Stem 0
Stem Tuber 0
Unclassified 9.29

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10044881 3300001979 Bacteria 1308
2 JGI24739J22299_10027672 3300001989 Bacteria 1980
3 JGI24737J22298_10015638 3300001990 Bacteria 2454
4 JGI24735J21928_10012978 3300002067 Bacteria 2627
5 JGI24744J21845_10030690 3300002077 Bacteria 1030
6 JGI25162J39368_1000770 3300002737 Bacteria 21661
7 JGI25164J39214_1000956 3300002772 Bacteria 9287
8 JGI25165J46597_1001819 3300003214 Bacteria 8952
9 JGI25165J46597_1001911 3300003214 Bacteria 8331
10 rootH2_10001334 3300003320 Bacteria 238709
11 rootH2_10014175 3300003320 Bacteria 16968
12 rootH2_10063092 3300003320 Bacteria 5681
13 rootH2_10145072 3300003320 Bacteria 3140
14 rootH2_10255934 3300003320 Unclassified 2464
15 rootL2_10040821 3300003322 Bacteria 6860
16 rootL2_10213699 3300003322 Bacteria 1711
17 rootH1_10007801 3300003323 Bacteria 12464
18 rootH1_10078897 3300003323 Bacteria 4298
19 rootH1_10098973 3300003323 Bacteria 1433
20 rootH1_10146856 3300003323 Bacteria 1316
21 rootH1_10216355 3300003323 Bacteria 1811
22 rootH1_10308969 3300003323 Bacteria 1678
23 Ga0065714_10113833 3300005288 Bacteria 1436
24 Ga0065714_10297027 3300005288 Bacteria 678
25 Ga0065704_10003545 3300005289 Bacteria 3978
26 Ga0070658_10053573 3300005327 Bacteria 3275
27 Ga0070658_10071286 3300005327 Bacteria 2846
28 Ga0070658_11277738 3300005327 Bacteria 638
29 Ga0070676_10000038 3300005328 Bacteria 39143
30 Ga0070683_100026336 3300005329 Bacteria 5235
31 Ga0068869_100079547 3300005334 Bacteria 2443
32 Ga0070680_100003410 3300005336 Bacteria 11861
33 Ga0068868_100060939 3300005338 Bacteria 2989
34 Ga0068868_100328250 3300005338 Bacteria 1305
35 Ga0070660_100024112 3300005339 Bacteria 4513
36 Ga0070660_100045819 3300005339 Bacteria 3350
37 Ga0070671_100017327 3300005355 Bacteria 5834
38 Ga0070674_100432673 3300005356 Bacteria 1082
39 Ga0070674_100793128 3300005356 Bacteria 817
40 Ga0070673_100023605 3300005364 Bacteria 4495
41 Ga0070688_101005727 3300005365 Bacteria 662
42 Ga0070659_100000148 3300005366 Bacteria 53569
43 Ga0070659_100017092 3300005366 Bacteria 5453
44 Ga0070659_100319445 3300005366 Bacteria 1298
45 Ga0070713_102060838 3300005436 Unclassified 553
46 Ga0070678_100019729 3300005456 Bacteria 4405
47 Ga0070662_100000185 3300005457 Bacteria 36147
48 Ga0070662_100192652 3300005457 Bacteria 1613
49 Ga0070681_10506716 3300005458 Bacteria 1120
50 Ga0068867_100000255 3300005459 Bacteria 35036
51 Ga0070679_100072193 3300005530 Bacteria 3443
52 Ga0070684_100009903 3300005535 Bacteria 7532
53 Ga0068853_100007862 3300005539 Bacteria 8551
54 Ga0068853_101388350 3300005539 Bacteria 679
55 Ga0068853_101825066 3300005539 Bacteria 589
56 Ga0070672_100622451 3300005543 Bacteria 941
57 Ga0070665_100000003 3300005548 Bacteria 811857
58 Ga0068855_100000073 3300005563 Bacteria 121126
59 Ga0068855_100002269 3300005563 Bacteria 23738
60 Ga0068855_100012779 3300005563 Bacteria 10128
61 Ga0068855_100044499 3300005563 Bacteria 5253
62 Ga0068855_100094743 3300005563 Bacteria 3442
63 Ga0068855_100440170 3300005563 Bacteria 1424
64 Ga0068855_100598784 3300005563 Bacteria 1189
65 Ga0068855_101044928 3300005563 Bacteria 856
66 Ga0068857_100054974 3300005577 Bacteria 3533
67 Ga0068857_100696419 3300005577 Bacteria 965
68 Ga0068854_100095521 3300005578 Bacteria 2219
69 Ga0068854_100935566 3300005578 Bacteria 764
70 Ga0068856_100000262 3300005614 Bacteria 57470
71 Ga0068856_100061558 3300005614 Bacteria 3708
72 Ga0068856_100675844 3300005614 Bacteria 1053
73 Ga0068852_100000372 3300005616 Bacteria 30292
74 Ga0068858_100089560 3300005842 Bacteria 2863
75 Ga0068858_100147938 3300005842 Bacteria 2207
76 Ga0075366_10010897 3300006195 Bacteria 5116
77 Ga0097621_100000054 3300006237 Bacteria 59756
78 Ga0068871_100000499 3300006358 Bacteria 26769
79 Ga0068865_100000051 3300006881 Bacteria 65346
80 Ga0105240_10004450 3300009093 Bacteria 21374
81 Ga0105240_10038418 3300009093 Bacteria 6141
82 Ga0105240_10075212 3300009093 Bacteria 4166
83 Ga0105240_11453586 3300009093 Bacteria 720
84 Ga0105245_10702596 3300009098 Bacteria 1044
85 Ga0105243_10000141 3300009148 Bacteria 82657
86 Ga0105243_10359832 3300009148 Bacteria 1339
87 Ga0105241_10005699 3300009174 Bacteria 9194
88 Ga0105241_10030534 3300009174 Bacteria 4028
89 Ga0105241_10212935 3300009174 Bacteria 1620
90 Ga0105241_12666288 3300009174 Bacteria 503
91 Ga0105242_10095620 3300009176 Bacteria 2508
92 Ga0105237_10003021 3300009545 Bacteria 20301
93 Ga0105237_10003676 3300009545 Bacteria 18072
94 Ga0105237_10009150 3300009545 Bacteria 10641
95 Ga0105237_11929836 3300009545 Unclassified 599
96 Ga0105238_10115342 3300009551 Bacteria 2665
97 Ga0105238_11410567 3300009551 Bacteria 724
98 Ga0105239_10000005 3300010375 Bacteria 496066
99 Ga0105239_10027211 3300010375 Bacteria 6295
100 Ga0105239_10069346 3300010375 Bacteria 3874
101 Ga0105239_10092637 3300010375 Bacteria 3336
102 Ga0105239_10131850 3300010375 Bacteria 2780
103 Ga0105246_10303482 3300011119 Bacteria 1290
104 Ga0105246_10415064 3300011119 Bacteria 1122
105 Ga0157373_10000234 3300013100 Bacteria 45210
106 Ga0157373_10000661 3300013100 Bacteria 27028
107 Ga0157373_10019741 3300013100 Bacteria 4901
108 Ga0157371_10000622 3300013102 Bacteria 42231
109 Ga0157371_10003610 3300013102 Bacteria 13942
110 Ga0157371_10065902 3300013102 Bacteria 2565
111 Ga0157370_10046721 3300013104 Bacteria 4151
112 Ga0157370_10144857 3300013104 Bacteria 2212
113 Ga0157370_10278667 3300013104 Bacteria 1545
114 Ga0157370_10301829 3300013104 Bacteria 1478
115 Ga0157370_10566263 3300013104 Bacteria 1041
116 Ga0157369_10000165 3300013105 Bacteria 93924
117 Ga0157369_10049450 3300013105 Bacteria 4558
118 Ga0157369_10067403 3300013105 Bacteria 3848
119 Ga0157369_11041310 3300013105 Unclassified 837
120 Ga0157374_10000130 3300013296 Bacteria 68718
121 Ga0157374_10002771 3300013296 Bacteria 14713
122 Ga0157374_10428208 3300013296 Bacteria 1323
123 Ga0157378_10036132 3300013297 Bacteria 4372
124 Ga0157378_10067887 3300013297 Bacteria 3196
125 Ga0157378_10108680 3300013297 Bacteria 2540
126 Ga0157378_10936082 3300013297 Unclassified 898
127 Ga0157378_10940578 3300013297 Bacteria 896
128 Ga0163162_10000064 3300013306 Bacteria 103542
129 Ga0163162_10443170 3300013306 Bacteria 1431
130 Ga0157372_10000021 3300013307 Bacteria 207801
131 Ga0157372_10001219 3300013307 Bacteria 27839
132 Ga0157372_10001775 3300013307 Bacteria 23401
133 Ga0157372_10024606 3300013307 Bacteria 6544
134 Ga0157372_10302881 3300013307 Bacteria 1859
135 Ga0157375_10011143 3300013308 Bacteria 7930
136 Ga0157375_10095131 3300013308 Bacteria 3049
137 Ga0157377_10043457 3300014745 Bacteria 2501
138 Ga0182006_1017081 3300015261 Unclassified 3089
139 Ga0182006_1169815 3300015261 Bacteria 731
140 Ga0213872_10006312 3300021361 Bacteria 5972
141 Ga0209563_110851 3300025230 Unclassified 1310
142 Ga0207427_100171 3300025231 Bacteria 71988
143 Ga0209437_100052 3300025233 Bacteria 380548
144 Ga0209026_1000222 3300025250 Bacteria 77765
145 Ga0209026_1025062 3300025250 Bacteria 901
146 Ga0209233_1000067 3300025261 Bacteria 380554
147 Ga0209455_1015401 3300025272 Bacteria 1682
148 Ga0207647_10000093 3300025904 Bacteria 68094
149 Ga0207647_10000492 3300025904 Bacteria 31644
150 Ga0207647_10057025 3300025904 Bacteria 2395
151 Ga0207645_10000585 3300025907 Bacteria 30250
152 Ga0207705_10164955 3300025909 Bacteria 1666
153 Ga0207705_10324540 3300025909 Bacteria 1183
154 Ga0207654_10021519 3300025911 Bacteria 3430
155 Ga0207654_10062086 3300025911 Bacteria 2188
156 Ga0207654_10341858 3300025911 Bacteria 1028
157 Ga0207695_10008590 3300025913 Bacteria 12762
158 Ga0207695_10100686 3300025913 Bacteria 2885
159 Ga0207671_10004292 3300025914 Bacteria 13710
160 Ga0207671_10017792 3300025914 Bacteria 5470
161 Ga0207671_10090078 3300025914 Bacteria 2310
162 Ga0207657_10067738 3300025919 Bacteria 3034
163 Ga0207657_10206688 3300025919 Bacteria 1577
164 Ga0207694_10061167 3300025924 Bacteria 2931
165 Ga0207687_10291573 3300025927 Bacteria 1311
166 Ga0207644_10007054 3300025931 Bacteria 7320
167 Ga0207690_10000228 3300025932 Bacteria 41941
168 Ga0207690_10007061 3300025932 Bacteria 6667
169 Ga0207706_10000243 3300025933 Bacteria 59842
170 Ga0207706_10300366 3300025933 Bacteria 1399
171 Ga0207686_10054411 3300025934 Bacteria 2507
172 Ga0207709_10000072 3300025935 Bacteria 178084
173 Ga0207669_10431616 3300025937 Bacteria 1039
174 Ga0207704_10000046 3300025938 Bacteria 86187
175 Ga0207689_10356147 3300025942 Bacteria 1217
176 Ga0207661_10038916 3300025944 Bacteria 3730
177 Ga0207667_10000009 3300025949 Bacteria 603135
178 Ga0207667_10007839 3300025949 Bacteria 12752
179 Ga0207667_10009151 3300025949 Bacteria 11698
180 Ga0207667_10018695 3300025949 Bacteria 7764
181 Ga0207667_10897459 3300025949 Bacteria 878
182 Ga0207667_11011475 3300025949 Bacteria 818
183 Ga0207667_11521754 3300025949 Bacteria 640
184 Ga0207651_10010972 3300025960 Bacteria 5047
185 Ga0207640_10210819 3300025981 Bacteria 1480
186 Ga0207677_10039458 3300026023 Bacteria 3105
187 Ga0207677_10311349 3300026023 Bacteria 1305
188 Ga0207703_10471376 3300026035 Bacteria 1175
189 Ga0207639_10059615 3300026041 Bacteria 2941
190 Ga0207702_10000492 3300026078 Bacteria 44456
191 Ga0207702_10679523 3300026078 Bacteria 1014
192 Ga0207648_10001014 3300026089 Bacteria 31612
193 Ga0207674_10083329 3300026116 Bacteria 3197
194 Ga0207674_10339285 3300026116 Bacteria 1453
195 Ga0207683_10022446 3300026121 Bacteria 5418
196 Ga0207698_10001731 3300026142 Bacteria 12733
197 Ga0268266_10000078 3300028379 Bacteria 213632
198 Ga0307515_10299415 3300028794 Unclassified 1295
199 Ga0307408_100000666 3300031548 Bacteria 28607
200 Ga0307408_100001084 3300031548 Bacteria 20809
201 Ga0307408_100024838 3300031548 Bacteria 4097
202 Ga0316576_10038477 3300031727 Bacteria 3430
203 Ga0316576_10336381 3300031727 Bacteria 1125
204 Ga0307405_10009153 3300031731 Bacteria 5065
205 Ga0307412_10001320 3300031911 Bacteria 13874
206 Ga0307412_10126504 3300031911 Bacteria 1849
207 Ga0307412_10647339 3300031911 Unclassified 901
208 Ga0307409_100836945 3300031995 Bacteria 930
209 Ga0307414_10017111 3300032004 Bacteria 4429
210 Ga0307414_10104338 3300032004 Unclassified 2141
211 Ga0307414_10146360 3300032004 Bacteria 1857
212 Ga0307414_10803361 3300032004 Bacteria 858
213 Ga0307411_10046368 3300032005 Unclassified 2801
214 Ga0307415_101427462 3300032126 Unclassified 660
215 Ga0373941_0013345 3300035115 Bacteria 2170
216 Ga0395899_0000121 3300037312 Bacteria 125324
217 Ga0395899_0000159 3300037312 Bacteria 102831
218 Ga0395899_0000883 3300037312 Bacteria 28485
219 Ga0395899_0001041 3300037312 Bacteria 25172
220 Ga0395900_0000014 3300037418 Bacteria 386513
221 Ga0395900_0077008 3300037418 Bacteria 3427
222 Ga0395900_0526086 3300037418 Unclassified 1130
223 Ga0395900_1547094 3300037418 Unclassified 575
224 Ga0395898_0009590 3300037466 Bacteria 10167
225 Ga0395905_0000037 3300037471 Bacteria 261808
226 Ga0395901_0000117 3300038443 Bacteria 105071
227 Ga0395901_0066693 3300038443 Bacteria 3749
228 Ga0436361_0942786 3300039447 Bacteria 10731
229 Ga0451789_0733304 3300041443 Bacteria 529
230 Ga0451577_1212395 3300042876 Unclassified 673
231 Ga0466969_0025832 3300044656 Bacteria 3016
232 Ga0466966_0096064 3300044684 Bacteria 1836
233 Ga0466961_0077939 3300044693 Bacteria 2099
234 Ga0453684_0024357 3300044712 Bacteria 8849
235 Ga0451576_0270096 3300045051 Unclassified 1778
236 Ga0466958_0027343 3300045836 Bacteria 3377
237 Ga0495651_0700085 3300046462 Unclassified 631
238 Ga0495606_0015246 3300046507 Bacteria 5934
239 Ga0495606_0033159 3300046507 Bacteria 3566
240 Ga0495625_0489998 3300046660 Bacteria 753
241 Ga0495661_0008089 3300046665 Bacteria 7294
242 Ga0495660_0017081 3300046810 Bacteria 4179
243 Ga0495687_014499 3300047443 Bacteria 4054
244 Ga0496116_0002887 3300048919 Bacteria 17585
245 Ga0496117_0000407 3300048920 Bacteria 72427
246 Ga0496118_0226672 3300048921 Bacteria 1082
247 Ga0496122_0222193 3300048925 Bacteria 1082
248 Ga0496123_0125122 3300048926 Bacteria 1437
249 Ga0496125_0162166 3300048928 Bacteria 1517
250 Ga0501291_055221 3300049514 Bacteria 733
251 Ga0501223_002068 3300049663 Bacteria 4504
252 nmdc:mga0k408_2783_c1 3300050493 Bacteria 9293
253 nmdc:mga0k408_771752_c1 3300050493 Bacteria 561
254 Ga0500578_0532554 3300053086 Bacteria 656
255 Ga0500618_000124 3300053125 Bacteria 63455
256 Ga0500616_0331784 3300053153 Bacteria 623

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025981 Ga0207640_10210819 Ga0207640_102108192 119
2 3300048925 Ga0496122_0222193 Ga0496122_0222193_12_410 127
3 3300005336 Ga0070680_100003410 Ga0070680_1000034102 131
4 3300005458 Ga0070681_10506716 Ga0070681_105067162 131
5 3300005530 Ga0070679_100072193 Ga0070679_1000721933 131
6 iso_pu_bacteria 2887375801 2887377159 131
7 3300003323 rootH1_10146856 rootH1_101468562 133
8 3300044684 Ga0466966_0096064 Ga0466966_0096064_153_563 136
9 3300009174 Ga0105241_12666288 Ga0105241_126662881 138
10 3300001989 JGI24739J22299_10027672 JGI24739J22299_100276723 139
11 3300003323 rootH1_10308969 rootH1_103089691 139
12 3300005563 Ga0068855_100012779 Ga0068855_1000127793 139
13 3300006195 Ga0075366_10010897 Ga0075366_100108974 139
14 3300013105 Ga0157369_10067403 Ga0157369_100674033 139
15 3300025949 Ga0207667_10009151 Ga0207667_100091514 139
16 3300050493 nmdc:mga0k408_2783_c1 nmdc:mga0k408_2783_c1_5698_6138 139
17 3300003320 rootH2_10014175 rootH2_100141756 140
18 3300009093 Ga0105240_11453586 Ga0105240_114535862 140
19 iso_pu_bacteria 2896317667 2896319949 141
20 iso_pu_bacteria 2599185184 2599478227 142
21 iso_pu_bacteria 2721755487 2722730230 142
22 iso_pu_bacteria 2890737413 2890738352 142
23 iso_pu_bacteria 2896344016 2896345779 142
24 iso_pu_bacteria 2898713307 2898714940 142
25 iso_pu_bacteria 2904780799 2904783875 142
26 iso_pu_bacteria 2919177583 2919181813 142
27 iso_pu_bacteria 2928078545 2928080723 142
28 iso_pu_bacteria 2928147474 2928150948 142
29 iso_pu_bacteria 2932082852 2932082896 142
30 iso_pu_bacteria 3003233435 3003234549 142
31 3300003320 rootH2_10255934 rootH2_102559343 144
32 3300015261 Ga0182006_1017081 Ga0182006_10170813 144
33 3300031548 Ga0307408_100000666 Ga0307408_1000006664 144
34 3300037418 Ga0395900_1547094 Ga0395900_1547094_34_483 144
35 3300003322 rootL2_10040821 rootL2_100408212 145
36 3300003323 rootH1_10098973 rootH1_100989732 145
37 3300005614 Ga0068856_100000262 Ga0068856_10000026240 145
38 3300013297 Ga0157378_10036132 Ga0157378_100361324 145
39 3300026078 Ga0207702_10000492 Ga0207702_1000049223 145
40 3300037312 Ga0395899_0000121 Ga0395899_0000121_112913_113350 145
41 3300037312 Ga0395899_0000159 Ga0395899_0000159_68876_69331 145
42 3300037418 Ga0395900_0077008 Ga0395900_0077008_426_881 145
43 3300001979 JGI24740J21852_10044881 JGI24740J21852_100448812 146
44 3300001990 JGI24737J22298_10015638 JGI24737J22298_100156382 146
45 3300002067 JGI24735J21928_10012978 JGI24735J21928_100129782 146
46 3300002077 JGI24744J21845_10030690 JGI24744J21845_100306901 146
47 3300002737 JGI25162J39368_1000770 JGI25162J39368_100077012 146
48 3300002772 JGI25164J39214_1000956 JGI25164J39214_10009567 146
49 3300003214 JGI25165J46597_1001819 JGI25165J46597_10018192 146
50 3300003214 JGI25165J46597_1001911 JGI25165J46597_10019113 146
51 3300003320 rootH2_10001334 rootH2_10001334175 146
52 3300003320 rootH2_10063092 rootH2_100630923 146
53 3300003320 rootH2_10145072 rootH2_101450722 146
54 3300003322 rootL2_10213699 rootL2_102136992 146
55 3300003323 rootH1_10007801 rootH1_100078014 146
56 3300003323 rootH1_10078897 rootH1_100788972 146
57 3300003323 rootH1_10216355 rootH1_102163551 146
58 3300005288 Ga0065714_10113833 Ga0065714_101138332 146
59 3300005288 Ga0065714_10297027 Ga0065714_102970272 146
60 3300005289 Ga0065704_10003545 Ga0065704_100035454 146
61 3300005327 Ga0070658_10053573 Ga0070658_100535733 146
62 3300005327 Ga0070658_10071286 Ga0070658_100712862 146
63 3300005327 Ga0070658_11277738 Ga0070658_112777381 146
64 3300005328 Ga0070676_10000038 Ga0070676_100000385 146
65 3300005329 Ga0070683_100026336 Ga0070683_1000263364 146
66 3300005334 Ga0068869_100079547 Ga0068869_1000795472 146
67 3300005338 Ga0068868_100060939 Ga0068868_1000609392 146
68 3300005338 Ga0068868_100328250 Ga0068868_1003282502 146
69 3300005339 Ga0070660_100024112 Ga0070660_1000241122 146
70 3300005339 Ga0070660_100045819 Ga0070660_1000458191 146
71 3300005355 Ga0070671_100017327 Ga0070671_1000173274 146
72 3300005356 Ga0070674_100432673 Ga0070674_1004326732 146
73 3300005356 Ga0070674_100793128 Ga0070674_1007931282 146
74 3300005364 Ga0070673_100023605 Ga0070673_1000236055 146
75 3300005365 Ga0070688_101005727 Ga0070688_1010057271 146
76 3300005366 Ga0070659_100000148 Ga0070659_1000001484 146
77 3300005366 Ga0070659_100017092 Ga0070659_1000170923 146
78 3300005366 Ga0070659_100319445 Ga0070659_1003194452 146
79 3300005436 Ga0070713_102060838 Ga0070713_1020608381 146
80 3300005456 Ga0070678_100019729 Ga0070678_1000197295 146
81 3300005457 Ga0070662_100000185 Ga0070662_1000001853 146
82 3300005457 Ga0070662_100192652 Ga0070662_1001926522 146
83 3300005459 Ga0068867_100000255 Ga0068867_1000002559 146
84 3300005535 Ga0070684_100009903 Ga0070684_1000099033 146
85 3300005539 Ga0068853_100007862 Ga0068853_1000078621 146
86 3300005539 Ga0068853_101388350 Ga0068853_1013883501 146
87 3300005539 Ga0068853_101825066 Ga0068853_1018250661 146
88 3300005543 Ga0070672_100622451 Ga0070672_1006224512 146
89 3300005548 Ga0070665_100000003 Ga0070665_100000003320 146
90 3300005563 Ga0068855_100000073 Ga0068855_10000007334 146
91 3300005563 Ga0068855_100002269 Ga0068855_10000226913 146
92 3300005563 Ga0068855_100044499 Ga0068855_1000444993 146
93 3300005563 Ga0068855_100094743 Ga0068855_1000947433 146
94 3300005563 Ga0068855_100440170 Ga0068855_1004401702 146
95 3300005563 Ga0068855_100598784 Ga0068855_1005987842 146
96 3300005563 Ga0068855_101044928 Ga0068855_1010449281 146
97 3300005577 Ga0068857_100054974 Ga0068857_1000549744 146
98 3300005577 Ga0068857_100696419 Ga0068857_1006964192 146
99 3300005578 Ga0068854_100095521 Ga0068854_1000955213 146
100 3300005578 Ga0068854_100935566 Ga0068854_1009355662 146
101 3300005614 Ga0068856_100061558 Ga0068856_1000615584 146
102 3300005614 Ga0068856_100675844 Ga0068856_1006758441 146
103 3300005616 Ga0068852_100000372 Ga0068852_1000003723 146
104 3300005842 Ga0068858_100089560 Ga0068858_1000895603 146
105 3300005842 Ga0068858_100147938 Ga0068858_1001479382 146
106 3300006237 Ga0097621_100000054 Ga0097621_10000005451 146
107 3300006358 Ga0068871_100000499 Ga0068871_10000049920 146
108 3300006881 Ga0068865_100000051 Ga0068865_1000000515 146
109 3300009093 Ga0105240_10004450 Ga0105240_1000445015 146
110 3300009093 Ga0105240_10038418 Ga0105240_100384186 146
111 3300009093 Ga0105240_10075212 Ga0105240_100752123 146
112 3300009098 Ga0105245_10702596 Ga0105245_107025962 146
113 3300009148 Ga0105243_10000141 Ga0105243_1000014128 146
114 3300009148 Ga0105243_10359832 Ga0105243_103598322 146
115 3300009174 Ga0105241_10005699 Ga0105241_100056998 146
116 3300009174 Ga0105241_10030534 Ga0105241_100305344 146
117 3300009174 Ga0105241_10212935 Ga0105241_102129351 146
118 3300009176 Ga0105242_10095620 Ga0105242_100956202 146
119 3300009545 Ga0105237_10003021 Ga0105237_1000302112 146
120 3300009545 Ga0105237_10003676 Ga0105237_100036763 146
121 3300009545 Ga0105237_10009150 Ga0105237_100091505 146
122 3300009545 Ga0105237_11929836 Ga0105237_119298361 146
123 3300009551 Ga0105238_10115342 Ga0105238_101153423 146
124 3300009551 Ga0105238_11410567 Ga0105238_114105672 146
125 3300010375 Ga0105239_10000005 Ga0105239_10000005203 146
126 3300010375 Ga0105239_10027211 Ga0105239_100272113 146
127 3300010375 Ga0105239_10069346 Ga0105239_100693462 146
128 3300010375 Ga0105239_10092637 Ga0105239_100926373 146
129 3300010375 Ga0105239_10131850 Ga0105239_101318503 146
130 3300011119 Ga0105246_10303482 Ga0105246_103034821 146
131 3300011119 Ga0105246_10415064 Ga0105246_104150642 146
132 3300013100 Ga0157373_10000234 Ga0157373_1000023421 146
133 3300013100 Ga0157373_10000661 Ga0157373_1000066114 146
134 3300013100 Ga0157373_10019741 Ga0157373_100197412 146
135 3300013102 Ga0157371_10000622 Ga0157371_1000062239 146
136 3300013102 Ga0157371_10003610 Ga0157371_100036105 146
137 3300013102 Ga0157371_10065902 Ga0157371_100659022 146
138 3300013104 Ga0157370_10046721 Ga0157370_100467214 146
139 3300013104 Ga0157370_10144857 Ga0157370_101448572 146
140 3300013104 Ga0157370_10278667 Ga0157370_102786672 146
141 3300013104 Ga0157370_10301829 Ga0157370_103018292 146
142 3300013104 Ga0157370_10566263 Ga0157370_105662632 146
143 3300013105 Ga0157369_10000165 Ga0157369_1000016528 146
144 3300013105 Ga0157369_10049450 Ga0157369_100494503 146
145 3300013105 Ga0157369_11041310 Ga0157369_110413102 146
146 3300013296 Ga0157374_10000130 Ga0157374_100001308 146
147 3300013296 Ga0157374_10002771 Ga0157374_100027714 146
148 3300013296 Ga0157374_10428208 Ga0157374_104282082 146
149 3300013297 Ga0157378_10067887 Ga0157378_100678873 146
150 3300013297 Ga0157378_10108680 Ga0157378_101086802 146
151 3300013297 Ga0157378_10936082 Ga0157378_109360822 146
152 3300013297 Ga0157378_10940578 Ga0157378_109405782 146
153 3300013306 Ga0163162_10000064 Ga0163162_1000006432 146
154 3300013306 Ga0163162_10443170 Ga0163162_104431702 146
155 3300013307 Ga0157372_10000021 Ga0157372_1000002148 146
156 3300013307 Ga0157372_10001219 Ga0157372_100012198 146
157 3300013307 Ga0157372_10001775 Ga0157372_1000177513 146
158 3300013307 Ga0157372_10024606 Ga0157372_100246066 146
159 3300013307 Ga0157372_10302881 Ga0157372_103028812 146
160 3300013308 Ga0157375_10011143 Ga0157375_100111433 146
161 3300013308 Ga0157375_10095131 Ga0157375_100951313 146
162 3300014745 Ga0157377_10043457 Ga0157377_100434573 146
163 3300015261 Ga0182006_1169815 Ga0182006_11698151 146
164 3300021361 Ga0213872_10006312 Ga0213872_100063125 146
165 3300025230 Ga0209563_110851 Ga0209563_1108512 146
166 3300025231 Ga0207427_100171 Ga0207427_10017149 146
167 3300025233 Ga0209437_100052 Ga0209437_10005256 146
168 3300025250 Ga0209026_1000222 Ga0209026_100022222 146
169 3300025250 Ga0209026_1025062 Ga0209026_10250621 146
170 3300025261 Ga0209233_1000067 Ga0209233_100006756 146
171 3300025272 Ga0209455_1015401 Ga0209455_10154012 146
172 3300025904 Ga0207647_10000093 Ga0207647_1000009336 146
173 3300025904 Ga0207647_10000492 Ga0207647_100004926 146
174 3300025904 Ga0207647_10057025 Ga0207647_100570252 146
175 3300025907 Ga0207645_10000585 Ga0207645_1000058511 146
176 3300025909 Ga0207705_10164955 Ga0207705_101649552 146
177 3300025909 Ga0207705_10324540 Ga0207705_103245402 146
178 3300025911 Ga0207654_10021519 Ga0207654_100215192 146
179 3300025911 Ga0207654_10062086 Ga0207654_100620862 146
180 3300025911 Ga0207654_10341858 Ga0207654_103418582 146
181 3300025913 Ga0207695_10008590 Ga0207695_100085906 146
182 3300025913 Ga0207695_10100686 Ga0207695_101006863 146
183 3300025914 Ga0207671_10004292 Ga0207671_1000429212 146
184 3300025914 Ga0207671_10017792 Ga0207671_100177924 146
185 3300025914 Ga0207671_10090078 Ga0207671_100900783 146
186 3300025919 Ga0207657_10067738 Ga0207657_100677382 146
187 3300025919 Ga0207657_10206688 Ga0207657_102066882 146
188 3300025924 Ga0207694_10061167 Ga0207694_100611672 146
189 3300025927 Ga0207687_10291573 Ga0207687_102915732 146
190 3300025931 Ga0207644_10007054 Ga0207644_100070545 146
191 3300025932 Ga0207690_10000228 Ga0207690_100002283 146
192 3300025932 Ga0207690_10007061 Ga0207690_100070616 146
193 3300025933 Ga0207706_10000243 Ga0207706_1000024332 146
194 3300025933 Ga0207706_10300366 Ga0207706_103003662 146
195 3300025934 Ga0207686_10054411 Ga0207686_100544112 146
196 3300025935 Ga0207709_10000072 Ga0207709_10000072117 146
197 3300025937 Ga0207669_10431616 Ga0207669_104316162 146
198 3300025938 Ga0207704_10000046 Ga0207704_100000464 146
199 3300025942 Ga0207689_10356147 Ga0207689_103561472 146
200 3300025944 Ga0207661_10038916 Ga0207661_100389164 146
201 3300025949 Ga0207667_10000009 Ga0207667_10000009176 146
202 3300025949 Ga0207667_10007839 Ga0207667_100078397 146
203 3300025949 Ga0207667_10018695 Ga0207667_100186954 146
204 3300025949 Ga0207667_10897459 Ga0207667_108974592 146
205 3300025949 Ga0207667_11011475 Ga0207667_110114752 146
206 3300025949 Ga0207667_11521754 Ga0207667_115217541 146
207 3300025960 Ga0207651_10010972 Ga0207651_100109723 146
208 3300026023 Ga0207677_10039458 Ga0207677_100394583 146
209 3300026023 Ga0207677_10311349 Ga0207677_103113492 146
210 3300026035 Ga0207703_10471376 Ga0207703_104713762 146
211 3300026041 Ga0207639_10059615 Ga0207639_100596153 146
212 3300026078 Ga0207702_10679523 Ga0207702_106795232 146
213 3300026089 Ga0207648_10001014 Ga0207648_1000101422 146
214 3300026116 Ga0207674_10083329 Ga0207674_100833292 146
215 3300026116 Ga0207674_10339285 Ga0207674_103392852 146
216 3300026121 Ga0207683_10022446 Ga0207683_100224463 146
217 3300026142 Ga0207698_10001731 Ga0207698_100017316 146
218 3300028379 Ga0268266_10000078 Ga0268266_10000078110 146
219 3300028794 Ga0307515_10299415 Ga0307515_102994152 146
220 3300031548 Ga0307408_100001084 Ga0307408_10000108412 146
221 3300031548 Ga0307408_100024838 Ga0307408_1000248382 146
222 3300031727 Ga0316576_10038477 Ga0316576_100384772 146
223 3300031727 Ga0316576_10336381 Ga0316576_103363812 146
224 3300031731 Ga0307405_10009153 Ga0307405_100091532 146
225 3300031911 Ga0307412_10001320 Ga0307412_100013203 146
226 3300031911 Ga0307412_10126504 Ga0307412_101265042 146
227 3300031911 Ga0307412_10647339 Ga0307412_106473392 146
228 3300031995 Ga0307409_100836945 Ga0307409_1008369451 146
229 3300032004 Ga0307414_10017111 Ga0307414_100171112 146
230 3300032004 Ga0307414_10104338 Ga0307414_101043383 146
231 3300032004 Ga0307414_10146360 Ga0307414_101463603 146
232 3300032004 Ga0307414_10803361 Ga0307414_108033612 146
233 3300032005 Ga0307411_10046368 Ga0307411_100463683 146
234 3300032126 Ga0307415_101427462 Ga0307415_1014274622 146
235 3300035115 Ga0373941_0013345 Ga0373941_0013345_432_872 146
236 3300037312 Ga0395899_0000883 Ga0395899_0000883_10139_10579 146
237 3300037312 Ga0395899_0001041 Ga0395899_0001041_6078_6518 146
238 3300037418 Ga0395900_0000014 Ga0395900_0000014_151402_151842 146
239 3300037418 Ga0395900_0526086 Ga0395900_0526086_13_453 146
240 3300037466 Ga0395898_0009590 Ga0395898_0009590_218_658 146
241 3300037471 Ga0395905_0000037 Ga0395905_0000037_151392_151832 146
242 3300038443 Ga0395901_0000117 Ga0395901_0000117_65049_65489 146
243 3300038443 Ga0395901_0066693 Ga0395901_0066693_134_574 146
244 3300039447 Ga0436361_0942786 Ga0436361_0942786_8963_9403 146
245 3300041443 Ga0451789_0733304 Ga0451789_0733304_69_509 146
246 3300042876 Ga0451577_1212395 Ga0451577_1212395_50_511 146
247 3300044656 Ga0466969_0025832 Ga0466969_0025832_811_1251 146
248 3300044693 Ga0466961_0077939 Ga0466961_0077939_289_729 146
249 3300044712 Ga0453684_0024357 Ga0453684_0024357_7438_7899 146
250 3300045051 Ga0451576_0270096 Ga0451576_0270096_1103_1564 146
251 3300045836 Ga0466958_0027343 Ga0466958_0027343_697_1137 146
252 3300046462 Ga0495651_0700085 Ga0495651_0700085_86_526 146
253 3300046507 Ga0495606_0015246 Ga0495606_0015246_4222_4662 146
254 3300046507 Ga0495606_0033159 Ga0495606_0033159_2062_2502 146
255 3300046660 Ga0495625_0489998 Ga0495625_0489998_158_598 146
256 3300046665 Ga0495661_0008089 Ga0495661_0008089_4576_5022 146
257 3300046810 Ga0495660_0017081 Ga0495660_0017081_3313_3753 146
258 3300047443 Ga0495687_014499 Ga0495687_014499_545_985 146
259 3300048919 Ga0496116_0002887 Ga0496116_0002887_14406_14861 146
260 3300048920 Ga0496117_0000407 Ga0496117_0000407_39906_40361 146
261 3300048921 Ga0496118_0226672 Ga0496118_0226672_150_605 146
262 3300048926 Ga0496123_0125122 Ga0496123_0125122_673_1128 146
263 3300048928 Ga0496125_0162166 Ga0496125_0162166_1024_1479 146
264 3300049514 Ga0501291_055221 Ga0501291_055221_46_498 146
265 3300049663 Ga0501223_002068 Ga0501223_002068_995_1444 146
266 3300050493 nmdc:mga0k408_771752_c1 nmdc:mga0k408_771752_c1_74_514 146
267 3300053086 Ga0500578_0532554 Ga0500578_0532554_134_583 146
268 3300053125 Ga0500618_000124 Ga0500618_000124_60533_60973 146
269 3300053153 Ga0500616_0331784 Ga0500616_0331784_143_583 146

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00293

NUDIX

NUDIX domain

6

145

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
5gg7-assembly1.cif.gz_A crystal structure of mycobacterium smegmatis mutt1 in complex with 8-oxo-dgtp, 8-oxo-dgmp and pyrophosphate (i) 0.7991 4 146
5ggc-assembly1.cif.gz_A crystal structure of mycobacterium smegmatis mutt1 in complex with phosphate and magnesium ions (excess magnesium, i) 0.7935 4 146
6m72-assembly1.cif.gz_A crystal structure of mycobacterium smegmatis mutt1 in complex with 8-oxo-dgdp 0.788 4 146
5xd4-assembly1.cif.gz_A crystal structure of mycobacterium smegmatis mutt1 in complex with atp (ii) 0.787 4 143
1sjy-assembly1.cif.gz_A-2 crystal structure of nudix hydrolase dr1025 from deinococcus radiodurans 0.7861 5 122
ID Description Score Start End Superfamily
3id9A00 Alpha Beta;Alpha-Beta Complex;Nucleoside Triphosphate Pyrophosphohydrolase;Nucleoside Triphosphate Pyrophosphohydrolase 0.8195 6 96 3.90.79.10
af_Q54U83_212_345_3.90.79.10 Alpha Beta;Alpha-Beta Complex;Nucleoside Triphosphate Pyrophosphohydrolase;Nucleoside Triphosphate Pyrophosphohydrolase 0.788 6 145 3.90.79.10
3gwyA00 Alpha Beta;Alpha-Beta Complex;Nucleoside Triphosphate Pyrophosphohydrolase;Nucleoside Triphosphate Pyrophosphohydrolase 0.7823 1 143 3.90.79.10
af_P77788_1_135_3.90.79.10 Alpha Beta;Alpha-Beta Complex;Nucleoside Triphosphate Pyrophosphohydrolase;Nucleoside Triphosphate Pyrophosphohydrolase 0.7822 3 145 3.90.79.10
2b0vA00 Alpha Beta;Alpha-Beta Complex;Nucleoside Triphosphate Pyrophosphohydrolase;Nucleoside Triphosphate Pyrophosphohydrolase 0.7795 3 145 3.90.79.10
ID Description Score Start End GO Terms
AF-A0A2T5JEU4-F1-model_v4 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) (7,8-diamino-pelargonic acid aminotransferase) (DAPA AT) (DAPA aminotransferase) (7,8-diaminononanoate synthase) (DANS) (Diaminopelargonic acid synthase) 0.9902 1 142 GO:0004015
GO:0004141
GO:0005737
GO:0009102
GO:0016787
GO:0030170
GO:0051537
AF-A0A563UIC3-F1-model_v4 NUDIX domain-containing protein 0.9725 4 145
AF-A0A3E0QD31-F1-model_v4 NUDIX hydrolase 0.9653 2 145 GO:0016787
AF-A0A2E4EHD1-F1-model_v4 NUDIX hydrolase 0.9628 1 145 GO:0016787
AF-A0A1F3QBP4-F1-model_v4 deleted 0.9623 4 145

Feature Viewer

pLDDT pTM Quality
94.25 0.89 High
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Predicted Structure (AlphaFold2)

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