F374984

General Info

Members Datasets Scaffolds Average Seq Length
267 177 264 475

Family's Representative Sequence

Representative Sequence 3300045051|Ga0451576_0013714|Ga0451576_0013714_6463_8130
Length 555
Sequence MTGDFRGDYRFEMSCTALNAVFAFMKIAKCLAKNAEGLWYLKMFLQPNRANFDHCRPTTAWGKRWDEHEPNCGQTEANMSRSAEKPCLGVIYGNRDFFPDALVAEARADIAQVFGQTGIRAVQLSEQETKLGGVETHADARKCAELFRRHADELDGVLVVLPNFGDEKGVADTLKMARLNVPVLIQGYPDDLKQLNPARRRDAYCGKISVCNNLVQADIKFSLPSKHVCHPASERFGRDLADFLGVCRVVNGLRGARLGAVGARPGAFNTVRYSEKLLERHGIGVTTVDLSEILGRAGKLDAEAKSVKNKLAEIKGYAPAPGVPADKLVQMARMGVVLTEWMETNSLDATAIQCWTSVQENFGCNVCTLMSMMSEKFLPSACEVDVTGVLTMYAMQLAGQSPAALVDWNNNYSDDDNKCVLFHCGNWAKSFLPDIKIANAPILGSILGVENTYGALEGRTPAGPLTFGRITTADPDGAIRAYVGEGELTNDPLDTFGNRAVARIPELQQLMRYVCRKGFEHHVVMTCSKTASILAEAFGNYLGWDVHCHAQNSWS

Samples

Sample ID Description Type Environment
1 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
2 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
3 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
4 2896317667 Sphingobacterium sp. SGR-19 Isolate Rhizosphere
5 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
6 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
7 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
8 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
9 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
10 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
11 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
12 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
13 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
14 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
15 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
16 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
17 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
18 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
19 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
20 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
21 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
22 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
23 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
24 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
25 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
26 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
27 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
28 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
29 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
30 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
31 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
32 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
33 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
34 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
35 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
36 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
37 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
38 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
39 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
40 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
41 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
42 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
43 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
44 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
46 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
47 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
48 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
49 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
50 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
51 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
52 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
53 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
54 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
55 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
56 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
57 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
58 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
59 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
60 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
61 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
95 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
98 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
99 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
100 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
101 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
102 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
103 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
104 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
105 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
106 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
107 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
108 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
109 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
110 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
111 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
112 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
113 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
114 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
115 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
116 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
117 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
118 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
119 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
120 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
121 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
122 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
123 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
124 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
125 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
126 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
127 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
128 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
129 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
130 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
131 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
132 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
133 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
134 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
135 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
136 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
137 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
138 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
139 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
140 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
141 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
142 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
143 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
144 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
145 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
146 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
147 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
148 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
149 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
150 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
151 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
152 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
162 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
163 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
164 3300049673 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I13_A_3_drought Metagenome Rhizosphere
165 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
166 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
167 3300049708 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D14_A_3_control Metagenome Rhizosphere
168 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
169 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
170 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
171 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
172 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
173 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
174 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
175 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
176 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
177 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.5
Metatranscriptomes 0
Isolates 1.5

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.37
Nodule 0
Rhizoplane 0
Rhizosphere 92.88
Stem 0
Stem Tuber 0
Unclassified 3.75

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootL2_10097153 3300003322 Bacteria 8154
2 rootH1_10001274 3300003316 Bacteria 18007
3 rootH1_10001274 3300003323 Bacteria 14899
4 Ga0065712_10001843 3300005290 Bacteria 5973
5 Ga0065712_10011162 3300005290 Unclassified 2542
6 Ga0065707_10096026 3300005295 Bacteria 3311
7 Ga0070658_10043673 3300005327 Bacteria 3620
8 Ga0070658_10082361 3300005327 Bacteria 2644
9 Ga0070676_10058567 3300005328 Bacteria 2283
10 Ga0070683_100089311 3300005329 Bacteria 2892
11 Ga0068869_100115374 3300005334 Unclassified 2048
12 Ga0068869_100120605 3300005334 Bacteria 2005
13 Ga0068869_100148007 3300005334 Bacteria 1819
14 Ga0070666_10109180 3300005335 Bacteria 1912
15 Ga0070689_100007881 3300005340 Bacteria 7469
16 Ga0070691_10008758 3300005341 Bacteria 4631
17 Ga0070669_100011834 3300005353 Bacteria 6189
18 Ga0070669_100086652 3300005353 Bacteria 2340
19 Ga0070675_100028347 3300005354 Bacteria 4507
20 Ga0070675_100029823 3300005354 Bacteria 4400
21 Ga0070675_100042211 3300005354 Bacteria 3726
22 Ga0070675_100110695 3300005354 Bacteria 2323
23 Ga0070671_100179899 3300005355 Bacteria 1790
24 Ga0070674_100033575 3300005356 Bacteria 3417
25 Ga0070674_100049310 3300005356 Bacteria 2894
26 Ga0070673_100131634 3300005364 Bacteria 2099
27 Ga0070688_100038449 3300005365 Unclassified 2922
28 Ga0070667_100006965 3300005367 Bacteria 9393
29 Ga0070667_100082571 3300005367 Bacteria 2751
30 Ga0070714_100005859 3300005435 Bacteria 9427
31 Ga0070700_100010880 3300005441 Bacteria 5030
32 Ga0070663_100057716 3300005455 Bacteria 2786
33 Ga0070678_100088334 3300005456 Bacteria 2369
34 Ga0070662_100037282 3300005457 Unclassified 3447
35 Ga0070662_100087744 3300005457 Bacteria 2330
36 Ga0070681_10012850 3300005458 Bacteria 8314
37 Ga0070681_10023255 3300005458 Bacteria 6232
38 Ga0070685_10001083 3300005466 Bacteria 14560
39 Ga0070685_10004433 3300005466 Bacteria 7095
40 Ga0070684_100053144 3300005535 Bacteria 3525
41 Ga0070672_100104863 3300005543 Bacteria 2298
42 Ga0068855_100017913 3300005563 Bacteria 8510
43 Ga0068855_100037888 3300005563 Bacteria 5730
44 Ga0070664_100016847 3300005564 Bacteria 5999
45 Ga0068857_100021529 3300005577 Bacteria 5673
46 Ga0068857_100075892 3300005577 Bacteria 2997
47 Ga0068856_100000696 3300005614 Bacteria 36434
48 Ga0068856_100024635 3300005614 Bacteria 5859
49 Ga0068856_100044839 3300005614 Bacteria 4352
50 Ga0068859_100003461 3300005617 Bacteria 16049
51 Ga0068859_100006947 3300005617 Bacteria 11497
52 Ga0068859_100033142 3300005617 Bacteria 5188
53 Ga0068859_100073134 3300005617 Bacteria 3466
54 Ga0068859_100116430 3300005617 Unclassified 2737
55 Ga0068863_100124138 3300005841 Bacteria 2463
56 Ga0068860_100003144 3300005843 Bacteria 17057
57 Ga0068860_100153708 3300005843 Bacteria 2217
58 Ga0081539_10086133 3300005985 Bacteria 1636
59 Ga0075366_10002957 3300006195 Bacteria 8849
60 Ga0075430_100009549 3300006846 Bacteria 8197
61 Ga0075431_100014983 3300006847 Bacteria 7848
62 Ga0068865_100040089 3300006881 Bacteria 3180
63 Ga0097620_100003461 3300006931 Bacteria 16049
64 Ga0097620_100006947 3300006931 Bacteria 11497
65 Ga0097620_100033145 3300006931 Bacteria 5188
66 Ga0097620_100073132 3300006931 Bacteria 3466
67 Ga0097620_100116437 3300006931 Unclassified 2737
68 Ga0105240_10000592 3300009093 Bacteria 67301
69 Ga0105240_10076609 3300009093 Bacteria 4123
70 Ga0105241_10014828 3300009174 Bacteria 5706
71 Ga0105241_10196807 3300009174 Bacteria 1681
72 Ga0105242_10032080 3300009176 Unclassified 4200
73 Ga0105242_10061774 3300009176 Bacteria 3082
74 Ga0105237_10000956 3300009545 Bacteria 38876
75 Ga0105237_10003831 3300009545 Bacteria 17683
76 Ga0105249_10006160 3300009553 Bacteria 10407
77 Ga0105249_10017506 3300009553 Bacteria 6363
78 Ga0105249_10250169 3300009553 Bacteria 1757
79 Ga0105239_10001332 3300010375 Bacteria 33262
80 Ga0157373_10000181 3300013100 Bacteria 51804
81 Ga0157373_10079863 3300013100 Bacteria 2307
82 Ga0157374_10001290 3300013296 Bacteria 21307
83 Ga0157374_10018796 3300013296 Bacteria 6108
84 Ga0157374_10047192 3300013296 Bacteria 3992
85 Ga0157378_10143704 3300013297 Bacteria 2218
86 Ga0157378_10173153 3300013297 Bacteria 2026
87 Ga0157378_10202419 3300013297 Bacteria 1878
88 Ga0163162_10007364 3300013306 Bacteria 10698
89 Ga0157372_10000021 3300013307 Bacteria 207801
90 Ga0157372_10007746 3300013307 Bacteria 11410
91 Ga0157372_10009340 3300013307 Bacteria 10435
92 Ga0157372_10050225 3300013307 Bacteria 4640
93 Ga0157375_10003971 3300013308 Bacteria 12829
94 Ga0157375_10116429 3300013308 Bacteria 2777
95 Ga0157375_10277309 3300013308 Bacteria 1839
96 Ga0163163_10000688 3300014325 Bacteria 28732
97 Ga0163163_10002343 3300014325 Bacteria 16027
98 Ga0157380_10000353 3300014326 Bacteria 27534
99 Ga0157380_10068739 3300014326 Unclassified 2856
100 Ga0157377_10002310 3300014745 Bacteria 8387
101 Ga0157376_10047299 3300014969 Bacteria 3551
102 Ga0209676_1000232 3300025292 Bacteria 120363
103 Ga0207697_10014838 3300025315 Bacteria 3227
104 Ga0207682_10033435 3300025893 Bacteria 2070
105 Ga0207647_10028616 3300025904 Bacteria 3617
106 Ga0207645_10001468 3300025907 Bacteria 19262
107 Ga0207705_10064028 3300025909 Bacteria 2657
108 Ga0207654_10042203 3300025911 Bacteria 2580
109 Ga0207707_10031975 3300025912 Bacteria 4607
110 Ga0207695_10000048 3300025913 Bacteria 421800
111 Ga0207695_10053940 3300025913 Bacteria 4201
112 Ga0207671_10001509 3300025914 Bacteria 26781
113 Ga0207671_10013244 3300025914 Bacteria 6578
114 Ga0207681_10037202 3300025923 Bacteria 3215
115 Ga0207650_10124801 3300025925 Bacteria 2008
116 Ga0207664_10003630 3300025929 Bacteria 10332
117 Ga0207706_10035155 3300025933 Bacteria 4457
118 Ga0207706_10130785 3300025933 Bacteria 2208
119 Ga0207670_10010505 3300025936 Bacteria 5339
120 Ga0207670_10089511 3300025936 Bacteria 2172
121 Ga0207704_10100637 3300025938 Bacteria 1926
122 Ga0207691_10045585 3300025940 Bacteria 4029
123 Ga0207689_10013053 3300025942 Bacteria 7094
124 Ga0207689_10026235 3300025942 Bacteria 4879
125 Ga0207689_10138441 3300025942 Bacteria 2005
126 Ga0207689_10195104 3300025942 Bacteria 1671
127 Ga0207661_10070500 3300025944 Bacteria 2854
128 Ga0207679_10010561 3300025945 Bacteria 5951
129 Ga0207667_10029133 3300025949 Bacteria 5989
130 Ga0207667_10063368 3300025949 Bacteria 3862
131 Ga0207712_10009283 3300025961 Bacteria 6223
132 Ga0207712_10111584 3300025961 Unclassified 2052
133 Ga0207668_10059506 3300025972 Bacteria 2677
134 Ga0207658_10005020 3300025986 Bacteria 9119
135 Ga0207703_10054583 3300026035 Bacteria 3250
136 Ga0207639_10028773 3300026041 Bacteria 4061
137 Ga0207678_10006599 3300026067 Bacteria 10291
138 Ga0207702_10004831 3300026078 Bacteria 11871
139 Ga0207702_10024526 3300026078 Bacteria 5004
140 Ga0207648_10027620 3300026089 Bacteria 5038
141 Ga0207676_10001241 3300026095 Bacteria 18980
142 Ga0207674_10014932 3300026116 Bacteria 8558
143 Ga0207674_10043765 3300026116 Bacteria 4615
144 Ga0207674_10144939 3300026116 Bacteria 2333
145 Ga0207675_100000139 3300026118 Bacteria 62161
146 Ga0207683_10003547 3300026121 Bacteria 13606
147 Ga0207428_10072884 3300027907 Unclassified 2695
148 Ga0268266_10000030 3300028379 Bacteria 417120
149 Ga0268264_10005286 3300028381 Bacteria 10933
150 Ga0265337_1007885 3300028556 Unclassified 3939
151 Ga0265326_10005170 3300028558 Bacteria 4123
152 Ga0265336_10003461 3300028666 Bacteria 6185
153 Ga0307515_10000002 3300028794 Bacteria 1231751
154 Ga0307515_10000092 3300028794 Bacteria 212425
155 Ga0265338_10000025 3300028800 Bacteria 296972
156 Ga0265338_10000198 3300028800 Bacteria 113584
157 Ga0265338_10000463 3300028800 Bacteria 72298
158 Ga0265338_10000699 3300028800 Bacteria 57627
159 Ga0265338_10001330 3300028800 Bacteria 40311
160 Ga0265338_10001683 3300028800 Bacteria 35130
161 Ga0265338_10002707 3300028800 Bacteria 26041
162 Ga0265338_10063054 3300028800 Bacteria 3235
163 Ga0265324_10000417 3300029957 Bacteria 30508
164 Ga0316183_1148322 3300030742 Bacteria 26985
165 Ga0316181_1068791 3300030744 Bacteria 41630
166 Ga0265320_10000344 3300031240 Bacteria 37824
167 Ga0265327_10000245 3300031251 Bacteria 108670
168 Ga0265327_10000538 3300031251 Bacteria 64869
169 Ga0265327_10044197 3300031251 Bacteria 2378
170 Ga0307513_10237808 3300031456 Bacteria 1629
171 Ga0307509_10037575 3300031507 Bacteria 5292
172 Ga0307408_100000836 3300031548 Bacteria 24310
173 Ga0307408_100002688 3300031548 Bacteria 12340
174 Ga0307508_10002576 3300031616 Bacteria 19073
175 Ga0316575_10045226 3300031665 Bacteria 1748
176 Ga0316576_10010767 3300031727 Bacteria 5957
177 Ga0307412_10005494 3300031911 Bacteria 7118
178 Ga0373930_0002439 3300034816 Bacteria 2875
179 Ga0373928_0000265 3300035084 Bacteria 10361
180 Ga0373944_0000118 3300035089 Bacteria 14818
181 Ga0373949_0000651 3300035090 Bacteria 11332
182 Ga0373951_0008655 3300035091 Unclassified 2293
183 Ga0373932_0000003 3300035112 Bacteria 459351
184 Ga0373945_0008894 3300035116 Bacteria 3282
185 Ga0373954_0003171 3300035118 Bacteria 6947
186 Ga0373962_0000037 3300035242 Bacteria 32416
187 Ga0373931_0000063 3300035691 Bacteria 54303
188 Ga0373935_0037280 3300035692 Bacteria 3042
189 Ga0373927_0005791 3300035695 Bacteria 8481
190 Ga0373927_0025786 3300035695 Bacteria 3843
191 Ga0373947_0030335 3300035725 Bacteria 3177
192 Ga0373925_0000434 3300037068 Bacteria 42244
193 Ga0395899_0001857 3300037312 Bacteria 17464
194 Ga0395900_0000048 3300037418 Bacteria 227760
195 Ga0395905_0250320 3300037471 Bacteria 1655
196 Ga0400489_51681 3300039093 Bacteria 5222
197 Ga0436365_1432952 3300039437 Bacteria 2968
198 Ga0451577_0001527 3300042876 Bacteria 30403
199 Ga0451577_0010154 3300042876 Bacteria 9018
200 Ga0466969_0000364 3300044656 Bacteria 24803
201 Ga0466966_0000540 3300044684 Bacteria 24078
202 Ga0466966_0029199 3300044684 Bacteria 3589
203 Ga0453684_0007860 3300044712 Bacteria 19402
204 Ga0453684_0029281 3300044712 Bacteria 7829
205 Ga0453684_0029563 3300044712 Bacteria 7776
206 Ga0466957_0000346 3300044842 Bacteria 22659
207 Ga0451576_0013714 3300045051 Bacteria 9055
208 Ga0451576_0113385 3300045051 Bacteria 2822
209 Ga0451576_0150552 3300045051 Bacteria 2427
210 Ga0451576_0175245 3300045051 Bacteria 2239
211 Ga0495638_0110677 3300046460 Bacteria 1632
212 Ga0495662_0044156 3300046476 Bacteria 2152
213 Ga0495628_0068824 3300046516 Bacteria 2761
214 Ga0495630_0004272 3300046517 Bacteria 10020
215 Ga0495630_0017954 3300046517 Bacteria 5191
216 Ga0495666_0075905 3300046526 Bacteria 1593
217 Ga0495652_0144357 3300046529 Unclassified 1868
218 Ga0495640_0028087 3300046533 Bacteria 4053
219 Ga0495586_0044655 3300046535 Bacteria 2387
220 Ga0495645_0034514 3300046543 Bacteria 3690
221 Ga0495634_0012931 3300046642 Bacteria 6039
222 Ga0495599_0116505 3300046678 Bacteria 1662
223 Ga0495658_0009304 3300046683 Bacteria 4891
224 Ga0495686_0007964 3300047472 Bacteria 7861
225 Ga0495686_0066807 3300047472 Bacteria 2221
226 Ga0501031_0004494 3300049568 Bacteria 9045
227 Ga0501032_0002007 3300049569 Bacteria 16032
228 Ga0501032_0019303 3300049569 Bacteria 4770
229 Ga0501034_0009606 3300049571 Bacteria 10120
230 Ga0501036_0057275 3300049572 Bacteria 3301
231 Ga0501036_0062340 3300049572 Bacteria 3158
232 Ga0501037_0027459 3300049573 Bacteria 4205
233 Ga0501040_0141707 3300049576 Bacteria 1694
234 Ga0501043_0000247 3300049579 Bacteria 48981
235 Ga0501043_0027878 3300049579 Bacteria 4433
236 Ga0501046_0000007 3300049580 Bacteria 356002
237 Ga0501046_0024824 3300049580 Bacteria 4912
238 Ga0501047_0006254 3300049581 Bacteria 11193
239 Ga0501047_0014051 3300049581 Bacteria 7608
240 Ga0501048_0024122 3300049582 Bacteria 4441
241 Ga0501202_007577 3300049652 Bacteria 1966
242 Ga0501235_012147 3300049669 Bacteria 1893
243 Ga0501240_000107 3300049673 Bacteria 5371
244 Ga0501243_001284 3300049675 Bacteria 3580
245 Ga0501249_013137 3300049679 Bacteria 1757
246 Ga0501245_004265 3300049708 Bacteria 1961
247 Ga0501083_0000048 3300049744 Bacteria 87560
248 Ga0501035_0000455 3300049822 Bacteria 45804
249 Ga0501035_0029065 3300049822 Bacteria 5041
250 Ga0501035_0055452 3300049822 Bacteria 3538
251 Ga0501035_0059830 3300049822 Bacteria 3393
252 Ga0501044_0000164 3300049823 Bacteria 82524
253 Ga0501044_0011990 3300049823 Bacteria 9391
254 Ga0501044_0016348 3300049823 Bacteria 7966
255 Ga0501044_0036571 3300049823 Bacteria 5137
256 Ga0501044_0064654 3300049823 Bacteria 3734
257 nmdc:mga09592_25444_c1 3300050508 Bacteria 4899
258 Ga0500644_0012523 3300053088 Bacteria 2348
259 Ga0500556_0006618 3300053104 Bacteria 3294
260 Ga0500562_000047 3300053108 Bacteria 62430
261 Ga0500568_0000384 3300053139 Bacteria 33842
262 Ga0500616_0013963 3300053153 Bacteria 4634
263 Ga0500616_0031224 3300053153 Bacteria 2920
264 Ga0500622_0004289 3300053156 Bacteria 9036

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300031456 Ga0307513_10237808 Ga0307513_102378081 451
2 3300045051 Ga0451576_0175245 Ga0451576_0175245_143_1567 454
3 3300031251 Ga0265327_10000245 Ga0265327_1000024557 463
4 3300037471 Ga0395905_0250320 Ga0395905_0250320_19_1410 463
5 3300046476 Ga0495662_0044156 Ga0495662_0044156_102_1529 464
6 3300046526 Ga0495666_0075905 Ga0495666_0075905_25_1452 464
7 3300046533 Ga0495640_0028087 Ga0495640_0028087_1216_2643 464
8 3300046535 Ga0495586_0044655 Ga0495586_0044655_99_1526 464
9 3300046642 Ga0495634_0012931 Ga0495634_0012931_3098_4525 464
10 3300046683 Ga0495658_0009304 Ga0495658_0009304_1515_2942 464
11 iso_pu_bacteria 2852627209 2852628667 464
12 iso_pu_bacteria 2896317667 2896319158 465
13 iso_pu_bacteria 2522125168 2522548734 466
14 iso_pu_bacteria 2842903701 2842905671 466
15 3300044712 Ga0453684_0029563 Ga0453684_0029563_6246_7649 467
16 3300031665 Ga0316575_10045226 Ga0316575_100452261 468
17 3300031727 Ga0316576_10010767 Ga0316576_100107673 468
18 3300039093 Ga0400489_51681 Ga0400489_51681_864_2270 468
19 3300003323 rootH1_10001274 rootH1_1000127413 469
20 3300005327 Ga0070658_10082361 Ga0070658_100823613 469
21 3300005535 Ga0070684_100053144 Ga0070684_1000531443 469
22 3300005563 Ga0068855_100037888 Ga0068855_1000378883 469
23 3300005577 Ga0068857_100021529 Ga0068857_1000215293 469
24 3300005614 Ga0068856_100024635 Ga0068856_1000246354 469
25 3300009093 Ga0105240_10000592 Ga0105240_1000059244 469
26 3300009174 Ga0105241_10014828 Ga0105241_100148282 469
27 3300009545 Ga0105237_10003831 Ga0105237_100038315 469
28 3300010375 Ga0105239_10001332 Ga0105239_1000133222 469
29 3300013100 Ga0157373_10000181 Ga0157373_1000018155 469
30 3300013307 Ga0157372_10007746 Ga0157372_100077461 469
31 3300025292 Ga0209676_1000232 Ga0209676_100023272 469
32 3300025909 Ga0207705_10064028 Ga0207705_100640281 469
33 3300025911 Ga0207654_10042203 Ga0207654_100422032 469
34 3300025913 Ga0207695_10000048 Ga0207695_10000048181 469
35 3300025914 Ga0207671_10013244 Ga0207671_100132445 469
36 3300025949 Ga0207667_10029133 Ga0207667_100291333 469
37 3300026116 Ga0207674_10043765 Ga0207674_100437652 469
38 3300044656 Ga0466969_0000364 Ga0466969_0000364_2169_3578 469
39 3300044684 Ga0466966_0000540 Ga0466966_0000540_13795_15204 469
40 3300049679 Ga0501249_013137 Ga0501249_013137_281_1747 469
41 3300005290 Ga0065712_10001843 Ga0065712_100018433 470
42 3300005341 Ga0070691_10008758 Ga0070691_100087584 470
43 3300005367 Ga0070667_100006965 Ga0070667_1000069657 470
44 3300005458 Ga0070681_10012850 Ga0070681_100128503 470
45 3300005466 Ga0070685_10001083 Ga0070685_100010837 470
46 3300005614 Ga0068856_100044839 Ga0068856_1000448391 470
47 3300005617 Ga0068859_100003461 Ga0068859_10000346112 470
48 3300005617 Ga0068859_100006947 Ga0068859_1000069477 470
49 3300005843 Ga0068860_100003144 Ga0068860_10000314410 470
50 3300005985 Ga0081539_10086133 Ga0081539_100861331 470
51 3300006931 Ga0097620_100003461 Ga0097620_10000346112 470
52 3300006931 Ga0097620_100006947 Ga0097620_1000069477 470
53 3300009174 Ga0105241_10196807 Ga0105241_101968072 470
54 3300009545 Ga0105237_10000956 Ga0105237_1000095615 470
55 3300009553 Ga0105249_10006160 Ga0105249_100061607 470
56 3300013306 Ga0163162_10007364 Ga0163162_100073647 470
57 3300013307 Ga0157372_10000021 Ga0157372_10000021132 470
58 3300013308 Ga0157375_10003971 Ga0157375_100039712 470
59 3300014969 Ga0157376_10047299 Ga0157376_100472992 470
60 3300025914 Ga0207671_10001509 Ga0207671_1000150913 470
61 3300025936 Ga0207670_10089511 Ga0207670_100895112 470
62 3300025961 Ga0207712_10009283 Ga0207712_100092833 470
63 3300025986 Ga0207658_10005020 Ga0207658_100050202 470
64 3300026078 Ga0207702_10024526 Ga0207702_100245264 470
65 3300028381 Ga0268264_10005286 Ga0268264_100052866 470
66 3300028794 Ga0307515_10000002 Ga0307515_10000002141 470
67 3300030742 Ga0316183_1148322 Ga0316183_11483226 470
68 3300030744 Ga0316181_1068791 Ga0316181_10687915 470
69 3300031548 Ga0307408_100000836 Ga0307408_10000083610 470
70 3300031548 Ga0307408_100002688 Ga0307408_1000026883 470
71 3300031911 Ga0307412_10005494 Ga0307412_100054945 470
72 3300037312 Ga0395899_0001857 Ga0395899_0001857_8659_10071 470
73 3300037418 Ga0395900_0000048 Ga0395900_0000048_94087_95499 470
74 3300042876 Ga0451577_0010154 Ga0451577_0010154_4446_5858 470
75 3300044684 Ga0466966_0029199 Ga0466966_0029199_1863_3275 470
76 3300044842 Ga0466957_0000346 Ga0466957_0000346_8297_9715 470
77 3300045051 Ga0451576_0113385 Ga0451576_0113385_96_1508 470
78 3300049652 Ga0501202_007577 Ga0501202_007577_437_1849 470
79 3300049673 Ga0501240_000107 Ga0501240_000107_23_1435 470
80 3300049675 Ga0501243_001284 Ga0501243_001284_1958_3370 470
81 3300049708 Ga0501245_004265 Ga0501245_004265_523_1935 470
82 3300005290 Ga0065712_10011162 Ga0065712_100111621 471
83 3300005295 Ga0065707_10096026 Ga0065707_100960262 471
84 3300005334 Ga0068869_100115374 Ga0068869_1001153742 471
85 3300005340 Ga0070689_100007881 Ga0070689_1000078815 471
86 3300005353 Ga0070669_100011834 Ga0070669_1000118342 471
87 3300005354 Ga0070675_100042211 Ga0070675_1000422112 471
88 3300005356 Ga0070674_100049310 Ga0070674_1000493102 471
89 3300005365 Ga0070688_100038449 Ga0070688_1000384492 471
90 3300005441 Ga0070700_100010880 Ga0070700_1000108801 471
91 3300005457 Ga0070662_100037282 Ga0070662_1000372821 471
92 3300005617 Ga0068859_100116430 Ga0068859_1001164302 471
93 3300006195 Ga0075366_10002957 Ga0075366_100029572 471
94 3300006931 Ga0097620_100116437 Ga0097620_1001164372 471
95 3300009093 Ga0105240_10076609 Ga0105240_100766092 471
96 3300009553 Ga0105249_10017506 Ga0105249_100175066 471
97 3300014326 Ga0157380_10000353 Ga0157380_100003537 471
98 3300014326 Ga0157380_10068739 Ga0157380_100687392 471
99 3300014745 Ga0157377_10002310 Ga0157377_100023107 471
100 3300025315 Ga0207697_10014838 Ga0207697_100148382 471
101 3300025913 Ga0207695_10053940 Ga0207695_100539403 471
102 3300025923 Ga0207681_10037202 Ga0207681_100372022 471
103 3300025933 Ga0207706_10035155 Ga0207706_100351552 471
104 3300025942 Ga0207689_10026235 Ga0207689_100262354 471
105 3300025961 Ga0207712_10111584 Ga0207712_101115842 471
106 3300026116 Ga0207674_10014932 Ga0207674_100149327 471
107 3300026118 Ga0207675_100000139 Ga0207675_1000001392 471
108 3300027907 Ga0207428_10072884 Ga0207428_100728842 471
109 3300031251 Ga0265327_10000538 Ga0265327_1000053840 471
110 3300031507 Ga0307509_10037575 Ga0307509_100375751 471
111 3300044712 Ga0453684_0007860 Ga0453684_0007860_4236_5660 471
112 3300044712 Ga0453684_0029281 Ga0453684_0029281_669_2093 471
113 3300045051 Ga0451576_0150552 Ga0451576_0150552_793_2217 471
114 3300046516 Ga0495628_0068824 Ga0495628_0068824_726_2150 471
115 3300046517 Ga0495630_0004272 Ga0495630_0004272_1432_2856 471
116 3300046529 Ga0495652_0144357 Ga0495652_0144357_368_1792 471
117 3300046543 Ga0495645_0034514 Ga0495645_0034514_903_2327 471
118 3300047472 Ga0495686_0007964 Ga0495686_0007964_6195_7610 471
119 3300047472 Ga0495686_0066807 Ga0495686_0066807_101_1516 471
120 3300049568 Ga0501031_0004494 Ga0501031_0004494_4940_6361 471
121 3300049569 Ga0501032_0002007 Ga0501032_0002007_13525_14949 471
122 3300049569 Ga0501032_0019303 Ga0501032_0019303_1285_2706 471
123 3300049572 Ga0501036_0057275 Ga0501036_0057275_731_2155 471
124 3300049579 Ga0501043_0027878 Ga0501043_0027878_855_2279 471
125 3300049669 Ga0501235_012147 Ga0501235_012147_374_1798 471
126 3300049822 Ga0501035_0000455 Ga0501035_0000455_1150_2574 471
127 3300049822 Ga0501035_0055452 Ga0501035_0055452_1447_2871 471
128 3300049823 Ga0501044_0000164 Ga0501044_0000164_43246_44670 471
129 3300049823 Ga0501044_0016348 Ga0501044_0016348_2044_3465 471
130 3300053088 Ga0500644_0012523 Ga0500644_0012523_601_2016 471
131 3300053104 Ga0500556_0006618 Ga0500556_0006618_252_1670 471
132 3300053153 Ga0500616_0031224 Ga0500616_0031224_1031_2446 471
133 3300005328 Ga0070676_10058567 Ga0070676_100585672 472
134 3300005329 Ga0070683_100089311 Ga0070683_1000893112 472
135 3300005334 Ga0068869_100120605 Ga0068869_1001206052 472
136 3300005334 Ga0068869_100148007 Ga0068869_1001480072 472
137 3300005335 Ga0070666_10109180 Ga0070666_101091801 472
138 3300005353 Ga0070669_100086652 Ga0070669_1000866522 472
139 3300005354 Ga0070675_100028347 Ga0070675_1000283473 472
140 3300005354 Ga0070675_100029823 Ga0070675_1000298233 472
141 3300005354 Ga0070675_100110695 Ga0070675_1001106952 472
142 3300005355 Ga0070671_100179899 Ga0070671_1001798992 472
143 3300005356 Ga0070674_100033575 Ga0070674_1000335753 472
144 3300005364 Ga0070673_100131634 Ga0070673_1001316342 472
145 3300005367 Ga0070667_100082571 Ga0070667_1000825712 472
146 3300005456 Ga0070678_100088334 Ga0070678_1000883342 472
147 3300005457 Ga0070662_100087744 Ga0070662_1000877442 472
148 3300005466 Ga0070685_10004433 Ga0070685_100044332 472
149 3300005543 Ga0070672_100104863 Ga0070672_1001048632 472
150 3300005564 Ga0070664_100016847 Ga0070664_1000168473 472
151 3300005577 Ga0068857_100075892 Ga0068857_1000758921 472
152 3300005617 Ga0068859_100033142 Ga0068859_1000331423 472
153 3300005617 Ga0068859_100073134 Ga0068859_1000731342 472
154 3300005841 Ga0068863_100124138 Ga0068863_1001241382 472
155 3300005843 Ga0068860_100153708 Ga0068860_1001537081 472
156 3300006846 Ga0075430_100009549 Ga0075430_1000095495 472
157 3300006847 Ga0075431_100014983 Ga0075431_1000149832 472
158 3300006881 Ga0068865_100040089 Ga0068865_1000400892 472
159 3300006931 Ga0097620_100033145 Ga0097620_1000331454 472
160 3300006931 Ga0097620_100073132 Ga0097620_1000731322 472
161 3300009176 Ga0105242_10032080 Ga0105242_100320802 472
162 3300009176 Ga0105242_10061774 Ga0105242_100617742 472
163 3300013100 Ga0157373_10079863 Ga0157373_100798632 472
164 3300013296 Ga0157374_10001290 Ga0157374_1000129018 472
165 3300013296 Ga0157374_10018796 Ga0157374_100187964 472
166 3300013296 Ga0157374_10047192 Ga0157374_100471922 472
167 3300013297 Ga0157378_10143704 Ga0157378_101437041 472
168 3300013297 Ga0157378_10173153 Ga0157378_101731532 472
169 3300013297 Ga0157378_10202419 Ga0157378_102024192 472
170 3300013307 Ga0157372_10009340 Ga0157372_100093403 472
171 3300013307 Ga0157372_10050225 Ga0157372_100502254 472
172 3300013308 Ga0157375_10116429 Ga0157375_101164292 472
173 3300013308 Ga0157375_10277309 Ga0157375_102773092 472
174 3300014325 Ga0163163_10000688 Ga0163163_1000068819 472
175 3300025893 Ga0207682_10033435 Ga0207682_100334352 472
176 3300025907 Ga0207645_10001468 Ga0207645_1000146810 472
177 3300025925 Ga0207650_10124801 Ga0207650_101248012 472
178 3300025933 Ga0207706_10130785 Ga0207706_101307852 472
179 3300025936 Ga0207670_10010505 Ga0207670_100105052 472
180 3300025940 Ga0207691_10045585 Ga0207691_100455853 472
181 3300025942 Ga0207689_10013053 Ga0207689_100130533 472
182 3300025942 Ga0207689_10138441 Ga0207689_101384412 472
183 3300025942 Ga0207689_10195104 Ga0207689_101951041 472
184 3300025945 Ga0207679_10010561 Ga0207679_100105614 472
185 3300025972 Ga0207668_10059506 Ga0207668_100595062 472
186 3300026035 Ga0207703_10054583 Ga0207703_100545834 472
187 3300026041 Ga0207639_10028773 Ga0207639_100287731 472
188 3300026089 Ga0207648_10027620 Ga0207648_100276204 472
189 3300026095 Ga0207676_10001241 Ga0207676_100012416 472
190 3300026116 Ga0207674_10144939 Ga0207674_101449392 472
191 3300026121 Ga0207683_10003547 Ga0207683_100035475 472
192 3300028379 Ga0268266_10000030 Ga0268266_10000030333 472
193 3300028800 Ga0265338_10063054 Ga0265338_100630543 472
194 3300039437 Ga0436365_1432952 Ga0436365_1432952_945_2411 472
195 3300042876 Ga0451577_0001527 Ga0451577_0001527_28651_30096 472
196 3300049579 Ga0501043_0000247 Ga0501043_0000247_35695_37113 472
197 3300049580 Ga0501046_0000007 Ga0501046_0000007_322855_324273 472
198 3300049581 Ga0501047_0006254 Ga0501047_0006254_8717_10135 472
199 3300049582 Ga0501048_0024122 Ga0501048_0024122_1967_3385 472
200 3300049744 Ga0501083_0000048 Ga0501083_0000048_57447_58865 472
201 3300049822 Ga0501035_0029065 Ga0501035_0029065_2713_4131 472
202 3300049823 Ga0501044_0064654 Ga0501044_0064654_105_1523 472
203 3300050508 nmdc:mga09592_25444_c1 nmdc:mga09592_25444_c1_1283_2701 472
204 3300053139 Ga0500568_0000384 Ga0500568_0000384_26041_27462 472
205 3300053156 Ga0500622_0004289 Ga0500622_0004289_1602_3023 472
206 3300003322 rootL2_10097153 rootL2_100971538 473
207 3300005327 Ga0070658_10043673 Ga0070658_100436732 473
208 3300005435 Ga0070714_100005859 Ga0070714_1000058596 473
209 3300005455 Ga0070663_100057716 Ga0070663_1000577162 473
210 3300005458 Ga0070681_10023255 Ga0070681_100232552 473
211 3300005563 Ga0068855_100017913 Ga0068855_1000179132 473
212 3300005614 Ga0068856_100000696 Ga0068856_10000069616 473
213 3300009553 Ga0105249_10250169 Ga0105249_102501692 473
214 3300014325 Ga0163163_10002343 Ga0163163_1000234311 473
215 3300025904 Ga0207647_10028616 Ga0207647_100286161 473
216 3300025912 Ga0207707_10031975 Ga0207707_100319753 473
217 3300025929 Ga0207664_10003630 Ga0207664_100036306 473
218 3300025938 Ga0207704_10100637 Ga0207704_101006372 473
219 3300025944 Ga0207661_10070500 Ga0207661_100705003 473
220 3300025949 Ga0207667_10063368 Ga0207667_100633682 473
221 3300026067 Ga0207678_10006599 Ga0207678_100065996 473
222 3300026078 Ga0207702_10004831 Ga0207702_100048318 473
223 3300028556 Ga0265337_1007885 Ga0265337_10078853 473
224 3300028558 Ga0265326_10005170 Ga0265326_100051703 473
225 3300028666 Ga0265336_10003461 Ga0265336_100034613 473
226 3300028794 Ga0307515_10000092 Ga0307515_10000092118 473
227 3300028800 Ga0265338_10000025 Ga0265338_10000025157 473
228 3300028800 Ga0265338_10000198 Ga0265338_100001983 473
229 3300028800 Ga0265338_10000463 Ga0265338_1000046337 473
230 3300028800 Ga0265338_10000699 Ga0265338_1000069934 473
231 3300028800 Ga0265338_10001330 Ga0265338_1000133015 473
232 3300028800 Ga0265338_10001683 Ga0265338_1000168312 473
233 3300028800 Ga0265338_10002707 Ga0265338_1000270711 473
234 3300029957 Ga0265324_10000417 Ga0265324_1000041719 473
235 3300031240 Ga0265320_10000344 Ga0265320_1000034423 473
236 3300031251 Ga0265327_10044197 Ga0265327_100441972 473
237 3300031616 Ga0307508_10002576 Ga0307508_100025769 473
238 3300034816 Ga0373930_0002439 Ga0373930_0002439_1246_2778 473
239 3300035084 Ga0373928_0000265 Ga0373928_0000265_6151_7683 473
240 3300035089 Ga0373944_0000118 Ga0373944_0000118_6859_8391 473
241 3300035090 Ga0373949_0000651 Ga0373949_0000651_4423_5955 473
242 3300035091 Ga0373951_0008655 Ga0373951_0008655_736_2160 473
243 3300035112 Ga0373932_0000003 Ga0373932_0000003_303575_305107 473
244 3300035116 Ga0373945_0008894 Ga0373945_0008894_938_2470 473
245 3300035118 Ga0373954_0003171 Ga0373954_0003171_2410_3843 473
246 3300035242 Ga0373962_0000037 Ga0373962_0000037_5458_6990 473
247 3300035691 Ga0373931_0000063 Ga0373931_0000063_33747_35279 473
248 3300035692 Ga0373935_0037280 Ga0373935_0037280_1037_2578 473
249 3300035695 Ga0373927_0005791 Ga0373927_0005791_2447_3979 473
250 3300035695 Ga0373927_0025786 Ga0373927_0025786_586_2010 473
251 3300035725 Ga0373947_0030335 Ga0373947_0030335_729_2261 473
252 3300037068 Ga0373925_0000434 Ga0373925_0000434_4182_5714 473
253 3300045051 Ga0451576_0013714 Ga0451576_0013714_6463_8130 473
254 3300046460 Ga0495638_0110677 Ga0495638_0110677_79_1512 473
255 3300046517 Ga0495630_0017954 Ga0495630_0017954_2058_3482 473
256 3300046678 Ga0495599_0116505 Ga0495599_0116505_20_1453 473
257 3300049571 Ga0501034_0009606 Ga0501034_0009606_3128_4558 473
258 3300049572 Ga0501036_0062340 Ga0501036_0062340_1489_2919 473
259 3300049573 Ga0501037_0027459 Ga0501037_0027459_649_2079 473
260 3300049576 Ga0501040_0141707 Ga0501040_0141707_168_1631 473
261 3300049580 Ga0501046_0024824 Ga0501046_0024824_581_2011 473
262 3300049581 Ga0501047_0014051 Ga0501047_0014051_3244_4674 473
263 3300049822 Ga0501035_0059830 Ga0501035_0059830_487_1917 473
264 3300049823 Ga0501044_0011990 Ga0501044_0011990_4718_6148 473
265 3300049823 Ga0501044_0036571 Ga0501044_0036571_1642_3072 473
266 3300053108 Ga0500562_000047 Ga0500562_000047_58336_59760 473
267 3300053153 Ga0500616_0013963 Ga0500616_0013963_2780_4204 473

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02952

Fucose_iso_C

L-fucose isomerase, C-terminal domain

421

549

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
7cyy-assembly1.cif.gz_F-2 crystal structure of arabinose isomerase from hybrid ai8 with adonitol 0.8222 8 473
7cx7-assembly1.cif.gz_C-2 crystal structure of arabinose isomerase from hybrid ai8 0.8218 5 473
4r1p-assembly1.cif.gz_C crystal structure of thermophilic geobacillus kaustophilus l-arabinose isomerase with mn2+ 0.8187 4 473
7cwv-assembly1.cif.gz_A crystal structure of arabinose isomerase from hyper thermophilic bacterium thermotoga maritima (tmai) wt 0.8154 8 470
7cx7-assembly1.cif.gz_F-2 crystal structure of arabinose isomerase from hybrid ai8 0.815 8 473
ID Description Score Start End Superfamily
af_Q10427_16_385_3.20.20.80 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.6981 57 113 3.20.20.80
4lqlD01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.683 8 169 3.40.50.10940
4f2dC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.6825 8 169 3.40.50.10940
1fuiF03 Alpha Beta;Alpha-Beta Barrel;L-fucose Isomerase; Chain A, domain 3;L-fucose/L-arabinose isomerase, C-terminal 0.6803 310 451 3.20.14.10
af_K7LF59_536_907_3.80.10.10 Alpha Beta;Alpha-Beta Horseshoe;Leucine-rich repeat, LRR (right-handed beta-alpha superhelix);Ribonuclease Inhibitor 0.6757 60 108 3.80.10.10
ID Description Score Start End GO Terms
AF-A0A143PIW3-F1-model_v4 L-fucose isomerase 0.9735 388 472 GO:0005737
GO:0006004
GO:0008736
AF-A0A660QAI3-F1-model_v4 Fucose isomerase 0.9712 7 178 GO:0005737
GO:0005996
GO:0016861
AF-X1HSX6-F1-model_v4 Fucose isomerase 0.9711 7 165 GO:0005737
GO:0005996
GO:0016861
AF-A0A2E9G1X6-F1-model_v4 deleted 0.9705 7 473
AF-A0A3N5LTB8-F1-model_v4 Fucose isomerase 0.9673 8 472 GO:0005737
GO:0006004
GO:0008736

Feature Viewer

pLDDT pTM Quality
86.17 0.9 High
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Predicted Structure (AlphaFold2)

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