F374983

General Info

Members Datasets Scaffolds Average Seq Length
267 192 534 310

Family's Representative Sequence

Representative Sequence 3300045049|Ga0466959_0154982|Ga0466959_0154982_370_1437
Length 355
Sequence MAARPRYVTSEQHTPRAAPCLRRSGRLCAMMQRNDGRSERDVMTSTAASERTSIAVIGLGSIGGVIAGLLASLGRYDITACVRRPIDRLIVEHPEGTIDVPIRALTDPNQATPVDWVLLATKTQDTEAAAPWLKRLSGPRTRIVTLQNGIGHAERLAPMTGEAPIVPTIVYYNGERLAADRVRFRRAGQHELAISDDEHARAFVALLEGTGLRVLLSPDFKTLVWRKLVINAMANPITALTLQRQAVFRREDVKALCLDVLREATAVARADGALLRDEEPEQLLATLLTYPPDAGTSMYFDRLAGRTLEIEALTGAVVAAGERHGVATPISRVLLALGRAVSEAPARITMTAASK

Samples

Sample ID Description Type Environment
1 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
4 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
13 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
14 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
17 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
21 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
22 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
23 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
24 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
25 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
26 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
31 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
32 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
33 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
34 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
35 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
36 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
37 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
38 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
39 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
40 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
41 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
42 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
43 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
45 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
46 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
47 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
48 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
49 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
50 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
51 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
52 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
53 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
54 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
56 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
87 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
88 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
89 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
90 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
91 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
92 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
93 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
94 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
95 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
96 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
97 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
98 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
99 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
100 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
101 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
102 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
103 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
104 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
105 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
106 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
107 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
108 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
109 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
110 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
111 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
112 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
113 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
114 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
115 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
116 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
117 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
118 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
119 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
120 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
121 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
122 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
123 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
124 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
125 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
126 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
127 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
128 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
129 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
130 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
131 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
132 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
133 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
134 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
135 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
136 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
137 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
138 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
139 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
140 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
141 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
142 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
143 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
144 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
145 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
146 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
147 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
148 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
149 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
150 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
151 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
159 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
160 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
161 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
162 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
163 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
164 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
167 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
168 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
169 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
170 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
171 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
172 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
173 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
174 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
175 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
176 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
177 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
178 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
179 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
180 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
181 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
182 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere
183 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
184 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
185 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
186 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
187 2513237096 Bradyrhizobium pachyrhizi USDA 3259 Isolate Nodule
188 2513237137 Bradyrhizobium elkanii USDA 94 Isolate Nodule
189 2513237145 Bradyrhizobium elkanii USDA 3254 Isolate Nodule
190 2667528175 Rhizobium tropici NFR14 Isolate Rhizoplane
191 2857576091 Pigmentiphaga sp. R-72090 Isolate Unclassified
192 8054563764 Acuticoccus kalidii M5D2P5 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.75
Metatranscriptomes 0
Isolates 2.25

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.62
Nodule 1.12
Rhizoplane 1.87
Rhizosphere 86.52
Stem 0
Stem Tuber 0
Unclassified 1.5

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466959_0154982 3300045049 Bacteria 1613
2 rootH1_10212746 3300003323 Bacteria 2691
3 JGI25404J52841_10000617 3300003659 Bacteria 5345
4 Ga0055539_1006651 3300003752 Bacteria 1476
5 Ga0070658_10007359 3300005327 Bacteria 8892
6 Ga0070658_10316773 3300005327 Bacteria 1332
7 Ga0070680_100054823 3300005336 Bacteria 3256
8 Ga0070660_100092557 3300005339 Bacteria 2386
9 Ga0070714_100049227 3300005435 Bacteria 3587
10 Ga0070714_100049271 3300005435 Bacteria 3586
11 Ga0070714_100099555 3300005435 Bacteria 2559
12 Ga0070714_100230541 3300005435 Bacteria 1706
13 Ga0070713_100028150 3300005436 Bacteria 4435
14 Ga0070713_100031120 3300005436 Bacteria 4246
15 Ga0070713_100065620 3300005436 Bacteria 3050
16 Ga0070713_100228436 3300005436 Bacteria 1691
17 Ga0070710_10177354 3300005437 Bacteria 1332
18 Ga0070711_100079643 3300005439 Bacteria 2330
19 Ga0070711_100221593 3300005439 Bacteria 1471
20 Ga0070705_100054190 3300005440 Bacteria 2351
21 Ga0070700_100002684 3300005441 Bacteria 9091
22 Ga0070694_100005964 3300005444 Bacteria 7388
23 Ga0070708_100157976 3300005445 Bacteria 2112
24 Ga0070708_100176230 3300005445 Bacteria 1998
25 Ga0070663_100029500 3300005455 Bacteria 3749
26 Ga0070662_100058146 3300005457 Bacteria 2813
27 Ga0070681_10323636 3300005458 Bacteria 1451
28 Ga0070681_10575572 3300005458 Bacteria 1040
29 Ga0070706_100035926 3300005467 Bacteria 4576
30 Ga0070698_100032282 3300005471 Bacteria 5425
31 Ga0070698_100193324 3300005471 Bacteria 1972
32 Ga0070698_100266759 3300005471 Bacteria 1644
33 Ga0070699_100003539 3300005518 Bacteria 13809
34 Ga0070684_100627999 3300005535 Unclassified 999
35 Ga0070697_100055863 3300005536 Bacteria 3211
36 Ga0070697_100267468 3300005536 Bacteria 1465
37 Ga0070695_100001740 3300005545 Bacteria 12251
38 Ga0070696_100006212 3300005546 Bacteria 7992
39 Ga0070704_100005544 3300005549 Bacteria 7360
40 Ga0068855_100039045 3300005563 Bacteria 5637
41 Ga0068855_100045875 3300005563 Bacteria 5167
42 Ga0068855_100073462 3300005563 Bacteria 3973
43 Ga0068855_100138701 3300005563 Bacteria 2773
44 Ga0068855_100226788 3300005563 Bacteria 2093
45 Ga0068857_100011120 3300005577 Bacteria 7829
46 Ga0068857_100496308 3300005577 Bacteria 1145
47 Ga0068856_100157578 3300005614 Bacteria 2280
48 Ga0070702_100213820 3300005615 Bacteria 1285
49 Ga0068852_100644056 3300005616 Bacteria 1067
50 Ga0068859_100019394 3300005617 Bacteria 6832
51 Ga0068861_100055930 3300005719 Bacteria 3010
52 Ga0068863_100159737 3300005841 Bacteria 2159
53 Ga0068860_100014188 3300005843 Bacteria 7812
54 Ga0068862_100006633 3300005844 Bacteria 9602
55 Ga0081540_1000015 3300005983 Bacteria 178704
56 Ga0081540_1022835 3300005983 Bacteria 3682
57 Ga0070717_10005201 3300006028 Bacteria 9478
58 Ga0070717_10036809 3300006028 Bacteria 3971
59 Ga0070716_100110794 3300006173 Bacteria 1701
60 Ga0070712_100013876 3300006175 Bacteria 5158
61 Ga0070712_100030495 3300006175 Bacteria 3624
62 Ga0070712_100217061 3300006175 Bacteria 1512
63 Ga0075428_100067432 3300006844 Bacteria 3917
64 Ga0075431_100004775 3300006847 Bacteria 13320
65 Ga0075431_100008848 3300006847 Bacteria 10088
66 Ga0097620_100019394 3300006931 Bacteria 6832
67 Ga0099794_10080252 3300007265 Bacteria 1608
68 Ga0099795_10003010 3300007788 Bacteria 4099
69 Ga0105237_10046803 3300009545 Bacteria 4350
70 Ga0105238_10114373 3300009551 Bacteria 2678
71 Ga0105249_10177617 3300009553 Bacteria 2069
72 Ga0105239_10003494 3300010375 Bacteria 19232
73 Ga0105246_10049507 3300011119 Bacteria 2878
74 Ga0157370_10062688 3300013104 Bacteria 3525
75 Ga0213871_10020998 3300021441 Bacteria 1624
76 Ga0213871_10034750 3300021441 Bacteria 1330
77 Ga0224572_1002911 3300024225 Bacteria 2830
78 Ga0224572_1024022 3300024225 Bacteria 1171
79 Ga0209677_101842 3300025253 Bacteria 8631
80 Ga0209233_1001815 3300025261 Bacteria 8212
81 Ga0207653_10000608 3300025885 Bacteria 12529
82 Ga0207692_10021081 3300025898 Bacteria 2976
83 Ga0207705_10100167 3300025909 Bacteria 2131
84 Ga0207684_10058939 3300025910 Bacteria 3259
85 Ga0207684_10098816 3300025910 Bacteria 2493
86 Ga0207707_10215587 3300025912 Bacteria 1671
87 Ga0207693_10015228 3300025915 Bacteria 6172
88 Ga0207693_10158496 3300025915 Bacteria 1780
89 Ga0207663_10030678 3300025916 Bacteria 3173
90 Ga0207663_10038833 3300025916 Bacteria 2881
91 Ga0207660_10371574 3300025917 Bacteria 1148
92 Ga0207662_10058529 3300025918 Bacteria 2307
93 Ga0207657_10028010 3300025919 Bacteria 5149
94 Ga0207652_10165922 3300025921 Bacteria 1980
95 Ga0207694_10056123 3300025924 Bacteria 3059
96 Ga0207700_10023359 3300025928 Bacteria 4261
97 Ga0207664_10179962 3300025929 Bacteria 1814
98 Ga0207706_10045834 3300025933 Bacteria 3872
99 Ga0207704_10421950 3300025938 Bacteria 1058
100 Ga0207665_10140809 3300025939 Bacteria 1720
101 Ga0207689_10118432 3300025942 Bacteria 2178
102 Ga0207667_10079720 3300025949 Bacteria 3393
103 Ga0207667_10282668 3300025949 Bacteria 1695
104 Ga0207667_10529407 3300025949 Bacteria 1193
105 Ga0207667_10566182 3300025949 Bacteria 1148
106 Ga0207712_10001652 3300025961 Bacteria 15007
107 Ga0207678_10008000 3300026067 Bacteria 9325
108 Ga0207708_10005821 3300026075 Bacteria 9120
109 Ga0207702_10119772 3300026078 Bacteria 2354
110 Ga0207641_10150256 3300026088 Bacteria 2109
111 Ga0207676_10118838 3300026095 Bacteria 2225
112 Ga0207674_10008069 3300026116 Bacteria 12207
113 Ga0207674_10209102 3300026116 Bacteria 1900
114 Ga0207675_100023909 3300026118 Bacteria 5682
115 Ga0207698_10257095 3300026142 Bacteria 1602
116 Ga0268265_10209479 3300028380 Bacteria 1697
117 Ga0268264_10040965 3300028381 Bacteria 3828
118 Ga0265338_10099226 3300028800 Bacteria 2379
119 Ga0265338_10232395 3300028800 Bacteria 1370
120 Ga0265330_10087637 3300031235 Bacteria 1337
121 Ga0265325_10005052 3300031241 Bacteria 8209
122 Ga0265325_10009111 3300031241 Bacteria 5813
123 Ga0265325_10042477 3300031241 Bacteria 2376
124 Ga0265340_10074862 3300031247 Bacteria 1600
125 Ga0265339_10000085 3300031249 Bacteria 79483
126 Ga0265339_10000450 3300031249 Bacteria 32195
127 Ga0265331_10036692 3300031250 Bacteria 2405
128 Ga0265313_10000152 3300031595 Bacteria 71968
129 Ga0265313_10005637 3300031595 Bacteria 9149
130 Ga0265313_10057730 3300031595 Bacteria 1830
131 Ga0307508_10239354 3300031616 Bacteria 1412
132 Ga0265342_10000211 3300031712 Bacteria 65440
133 Ga0265342_10015086 3300031712 Bacteria 5097
134 Ga0265342_10132039 3300031712 Bacteria 1398
135 Ga0307516_10010832 3300031730 Bacteria 9978
136 Ga0316583_10000457 3300032133 Bacteria 12051
137 Ga0307510_10227090 3300033180 Bacteria 1373
138 Ga0373926_0020988 3300035083 Bacteria 2259
139 Ga0373944_0003111 3300035089 Bacteria 4272
140 Ga0373936_0029230 3300035113 Bacteria 2169
141 Ga0373936_0033749 3300035113 Bacteria 2030
142 Ga0373936_0058549 3300035113 Bacteria 1569
143 Ga0373954_0026697 3300035118 Bacteria 2648
144 Ga0373943_0001974 3300035170 Bacteria 9288
145 Ga0373943_0106661 3300035170 Bacteria 1472
146 Ga0373946_0005210 3300035171 Bacteria 4687
147 Ga0373946_0028965 3300035171 Bacteria 2200
148 Ga0373955_0007915 3300035172 Bacteria 4907
149 Ga0373924_0012602 3300035410 Bacteria 3162
150 Ga0373935_0004646 3300035692 Bacteria 8072
151 Ga0373935_0019136 3300035692 Bacteria 4175
152 Ga0373927_0042043 3300035695 Bacteria 2963
153 Ga0373927_0253857 3300035695 Bacteria 1156
154 Ga0373933_0013919 3300035724 Bacteria 4463
155 Ga0373947_0003860 3300035725 Bacteria 8822
156 Ga0373947_0265149 3300035725 Bacteria 1139
157 Ga0373937_0002971 3300036401 Bacteria 14195
158 Ga0373937_0237935 3300036401 Unclassified 1715
159 Ga0373925_0002003 3300037068 Bacteria 16885
160 Ga0373925_0023747 3300037068 Bacteria 4473
161 Ga0395905_0246366 3300037471 Bacteria 1670
162 Ga0436360_0565907 3300039438 Bacteria 2784
163 Ga0436360_0698621 3300039438 Bacteria 1578
164 Ga0436361_0965343 3300039447 Bacteria 3452
165 Ga0436363_1550642 3300039450 Bacteria 2048
166 Ga0466963_0185657 3300044694 Bacteria 1452
167 Ga0466957_0277010 3300044842 Bacteria 1122
168 Ga0466959_0128518 3300045049 Bacteria 1797
169 Ga0466967_0228273 3300045976 Bacteria 1772
170 Ga0466967_0251403 3300045976 Bacteria 1689
171 Ga0495629_0013185 3300046459 Bacteria 5968
172 Ga0495629_0121132 3300046459 Bacteria 1822
173 Ga0495638_0056524 3300046460 Unclassified 2435
174 Ga0495580_0119915 3300046472 Bacteria 1826
175 Ga0495639_0012920 3300046475 Bacteria 3604
176 Ga0495662_0023574 3300046476 Bacteria 2971
177 Ga0495664_0000327 3300046477 Bacteria 22936
178 Ga0495618_0004177 3300046514 Bacteria 8913
179 Ga0495630_0049463 3300046517 Bacteria 3146
180 Ga0495630_0058115 3300046517 Bacteria 2899
181 Ga0495640_0041795 3300046533 Bacteria 3202
182 Ga0495640_0095186 3300046533 Bacteria 1960
183 Ga0495640_0244006 3300046533 Bacteria 1127
184 Ga0495587_0049012 3300046536 Bacteria 2501
185 Ga0495645_0001032 3300046543 Bacteria 18963
186 Ga0495667_0029443 3300046559 Bacteria 3697
187 Ga0495634_0012496 3300046642 Bacteria 6143
188 Ga0495635_0011993 3300046663 Bacteria 6073
189 Ga0495588_0097853 3300046674 Bacteria 1540
190 Ga0495658_0042950 3300046683 Bacteria 2526
191 Ga0495613_0037037 3300046689 Bacteria 3617
192 Ga0495624_0012662 3300046690 Bacteria 5760
193 Ga0495674_0010178 3300047319 Bacteria 8910
194 Ga0495672_0051484 3300047320 Bacteria 2425
195 Ga0495672_0068534 3300047320 Bacteria 2017
196 Ga0495680_0045929 3300047322 Bacteria 3447
197 Ga0495680_0081381 3300047322 Bacteria 2445
198 Ga0495684_0014462 3300047471 Bacteria 6072
199 Ga0495684_0075350 3300047471 Bacteria 2564
200 Ga0495686_0120826 3300047472 Bacteria 1562
201 Ga0495593_0018765 3300047673 Bacteria 3883
202 Ga0496100_0144128 3300048903 Bacteria 1692
203 Ga0496102_0210061 3300048905 Bacteria 1835
204 Ga0496106_0007360 3300048909 Bacteria 8134
205 Ga0496115_0065389 3300048918 Bacteria 2937
206 Ga0496118_0208984 3300048921 Bacteria 1147
207 Ga0496119_0068745 3300048922 Bacteria 2084
208 Ga0496121_0009868 3300048924 Bacteria 10889
209 Ga0496121_0041038 3300048924 Bacteria 4051
210 Ga0496126_0013761 3300048929 Bacteria 8206
211 Ga0496126_0031690 3300048929 Bacteria 4989
212 Ga0501033_0020915 3300049570 Bacteria 4939
213 Ga0501033_0098134 3300049570 Bacteria 2140
214 Ga0501033_0282023 3300049570 Bacteria 1172
215 Ga0501034_0350440 3300049571 Bacteria 1405
216 Ga0501037_0125956 3300049573 Bacteria 1839
217 Ga0501038_0393378 3300049574 Bacteria 1073
218 Ga0501041_0184006 3300049577 Bacteria 1308
219 Ga0501046_0053266 3300049580 Bacteria 3187
220 Ga0501047_0186205 3300049581 Bacteria 1941
221 Ga0501048_0161267 3300049582 Bacteria 1587
222 Ga0501070_0053185 3300049586 Bacteria 3360
223 Ga0501072_0098622 3300049588 Bacteria 2323
224 Ga0501072_0136751 3300049588 Bacteria 1954
225 Ga0501074_0088058 3300049590 Bacteria 2224
226 Ga0501074_0179124 3300049590 Bacteria 1512
227 Ga0501079_0050031 3300049741 Bacteria 3226
228 Ga0501079_0169845 3300049741 Bacteria 1700
229 Ga0501081_0032483 3300049743 Bacteria 3541
230 Ga0501081_0034328 3300049743 Bacteria 3451
231 Ga0501035_0140598 3300049822 Bacteria 2099
232 Ga0501035_0469968 3300049822 Bacteria 1038
233 Ga0501044_0079627 3300049823 Bacteria 3319
234 Ga0501044_0166996 3300049823 Bacteria 2174
235 Ga0501044_0611169 3300049823 Bacteria 982
236 Ga0501045_0127206 3300049824 Bacteria 1893
237 Ga0501045_0335667 3300049824 Bacteria 1125
238 nmdc:mga05p37_1051346_c1 3300050507 Bacteria 859
239 nmdc:mga09592_121573_c1 3300050508 Bacteria 2243
240 nmdc:mga06r32_27630_c1 3300050510 Bacteria 5304
241 Ga0495612_0003038 3300053078 Bacteria 6964
242 Ga0500635_0075853 3300053080 Unclassified 1200
243 Ga0495595_0031193 3300053084 Bacteria 2394
244 Ga0495619_0013993 3300053085 Bacteria 5062
245 Ga0495619_0056092 3300053085 Bacteria 2611
246 Ga0500641_0010631 3300053096 Bacteria 3330
247 Ga0500572_010649 3300053111 Bacteria 2205
248 Ga0500595_002154 3300053119 Bacteria 10016
249 Ga0500642_0000843 3300053130 Bacteria 8951
250 Ga0500559_0004906 3300053136 Bacteria 6233
251 Ga0500568_0001484 3300053139 Bacteria 15031
252 Ga0500568_0040700 3300053139 Bacteria 1870
253 Ga0500627_0038773 3300053158 Bacteria 2038
254 Ga0500636_0066796 3300053177 Bacteria 2090
255 Ga0500570_074035 3300053724 Bacteria 1573
256 Ga0500645_017463 3300053730 Bacteria 2248
257 Ga0501084_0105484 3300054114 Bacteria 2367
258 Ga0501084_0264805 3300054114 Bacteria 1451
259 Ga0501082_0015995 3300060353 Bacteria 6454
260 Ga0501082_0111943 3300060353 Bacteria 2363
261 Ga0530510_0031310 3300061734 Bacteria 3825
262 2513657397 2513237096 Bacteria 8722461
263 2513857173 2513237137 Bacteria 9558895
264 2513916650 2513237145 Bacteria 8979722
265 2671119416 2667528175 Bacteria 7532676
266 2857577115 2857576091 Bacteria 5465855
267 8054566182 8054563764 Bacteria 5592885
268 Ga0466959_0154982
269 rootH1_10212746
270 JGI25404J52841_10000617
271 Ga0055539_1006651
272 Ga0070658_10007359
273 Ga0070658_10316773
274 Ga0070680_100054823
275 Ga0070660_100092557
276 Ga0070714_100049227
277 Ga0070714_100049271
278 Ga0070714_100099555
279 Ga0070714_100230541
280 Ga0070713_100028150
281 Ga0070713_100031120
282 Ga0070713_100065620
283 Ga0070713_100228436
284 Ga0070710_10177354
285 Ga0070711_100079643
286 Ga0070711_100221593
287 Ga0070705_100054190
288 Ga0070700_100002684
289 Ga0070694_100005964
290 Ga0070708_100157976
291 Ga0070708_100176230
292 Ga0070663_100029500
293 Ga0070662_100058146
294 Ga0070681_10323636
295 Ga0070681_10575572
296 Ga0070706_100035926
297 Ga0070698_100032282
298 Ga0070698_100193324
299 Ga0070698_100266759
300 Ga0070699_100003539
301 Ga0070684_100627999
302 Ga0070697_100055863
303 Ga0070697_100267468
304 Ga0070695_100001740
305 Ga0070696_100006212
306 Ga0070704_100005544
307 Ga0068855_100039045
308 Ga0068855_100045875
309 Ga0068855_100073462
310 Ga0068855_100138701
311 Ga0068855_100226788
312 Ga0068857_100011120
313 Ga0068857_100496308
314 Ga0068856_100157578
315 Ga0070702_100213820
316 Ga0068852_100644056
317 Ga0068859_100019394
318 Ga0068861_100055930
319 Ga0068863_100159737
320 Ga0068860_100014188
321 Ga0068862_100006633
322 Ga0081540_1000015
323 Ga0081540_1022835
324 Ga0070717_10005201
325 Ga0070717_10036809
326 Ga0070716_100110794
327 Ga0070712_100013876
328 Ga0070712_100030495
329 Ga0070712_100217061
330 Ga0075428_100067432
331 Ga0075431_100004775
332 Ga0075431_100008848
333 Ga0097620_100019394
334 Ga0099794_10080252
335 Ga0099795_10003010
336 Ga0105237_10046803
337 Ga0105238_10114373
338 Ga0105249_10177617
339 Ga0105239_10003494
340 Ga0105246_10049507
341 Ga0157370_10062688
342 Ga0213871_10020998
343 Ga0213871_10034750
344 Ga0224572_1002911
345 Ga0224572_1024022
346 Ga0209677_101842
347 Ga0209233_1001815
348 Ga0207653_10000608
349 Ga0207692_10021081
350 Ga0207705_10100167
351 Ga0207684_10058939
352 Ga0207684_10098816
353 Ga0207707_10215587
354 Ga0207693_10015228
355 Ga0207693_10158496
356 Ga0207663_10030678
357 Ga0207663_10038833
358 Ga0207660_10371574
359 Ga0207662_10058529
360 Ga0207657_10028010
361 Ga0207652_10165922
362 Ga0207694_10056123
363 Ga0207700_10023359
364 Ga0207664_10179962
365 Ga0207706_10045834
366 Ga0207704_10421950
367 Ga0207665_10140809
368 Ga0207689_10118432
369 Ga0207667_10079720
370 Ga0207667_10282668
371 Ga0207667_10529407
372 Ga0207667_10566182
373 Ga0207712_10001652
374 Ga0207678_10008000
375 Ga0207708_10005821
376 Ga0207702_10119772
377 Ga0207641_10150256
378 Ga0207676_10118838
379 Ga0207674_10008069
380 Ga0207674_10209102
381 Ga0207675_100023909
382 Ga0207698_10257095
383 Ga0268265_10209479
384 Ga0268264_10040965
385 Ga0265338_10099226
386 Ga0265338_10232395
387 Ga0265330_10087637
388 Ga0265325_10005052
389 Ga0265325_10009111
390 Ga0265325_10042477
391 Ga0265340_10074862
392 Ga0265339_10000085
393 Ga0265339_10000450
394 Ga0265331_10036692
395 Ga0265313_10000152
396 Ga0265313_10005637
397 Ga0265313_10057730
398 Ga0307508_10239354
399 Ga0265342_10000211
400 Ga0265342_10015086
401 Ga0265342_10132039
402 Ga0307516_10010832
403 Ga0316583_10000457
404 Ga0307510_10227090
405 Ga0373926_0020988
406 Ga0373944_0003111
407 Ga0373936_0029230
408 Ga0373936_0033749
409 Ga0373936_0058549
410 Ga0373954_0026697
411 Ga0373943_0001974
412 Ga0373943_0106661
413 Ga0373946_0005210
414 Ga0373946_0028965
415 Ga0373955_0007915
416 Ga0373924_0012602
417 Ga0373935_0004646
418 Ga0373935_0019136
419 Ga0373927_0042043
420 Ga0373927_0253857
421 Ga0373933_0013919
422 Ga0373947_0003860
423 Ga0373947_0265149
424 Ga0373937_0002971
425 Ga0373937_0237935
426 Ga0373925_0002003
427 Ga0373925_0023747
428 Ga0395905_0246366
429 Ga0436360_0565907
430 Ga0436360_0698621
431 Ga0436361_0965343
432 Ga0436363_1550642
433 Ga0466963_0185657
434 Ga0466957_0277010
435 Ga0466959_0128518
436 Ga0466967_0228273
437 Ga0466967_0251403
438 Ga0495629_0013185
439 Ga0495629_0121132
440 Ga0495638_0056524
441 Ga0495580_0119915
442 Ga0495639_0012920
443 Ga0495662_0023574
444 Ga0495664_0000327
445 Ga0495618_0004177
446 Ga0495630_0049463
447 Ga0495630_0058115
448 Ga0495640_0041795
449 Ga0495640_0095186
450 Ga0495640_0244006
451 Ga0495587_0049012
452 Ga0495645_0001032
453 Ga0495667_0029443
454 Ga0495634_0012496
455 Ga0495635_0011993
456 Ga0495588_0097853
457 Ga0495658_0042950
458 Ga0495613_0037037
459 Ga0495624_0012662
460 Ga0495674_0010178
461 Ga0495672_0051484
462 Ga0495672_0068534
463 Ga0495680_0045929
464 Ga0495680_0081381
465 Ga0495684_0014462
466 Ga0495684_0075350
467 Ga0495686_0120826
468 Ga0495593_0018765
469 Ga0496100_0144128
470 Ga0496102_0210061
471 Ga0496106_0007360
472 Ga0496115_0065389
473 Ga0496118_0208984
474 Ga0496119_0068745
475 Ga0496121_0009868
476 Ga0496121_0041038
477 Ga0496126_0013761
478 Ga0496126_0031690
479 Ga0501033_0020915
480 Ga0501033_0098134
481 Ga0501033_0282023
482 Ga0501034_0350440
483 Ga0501037_0125956
484 Ga0501038_0393378
485 Ga0501041_0184006
486 Ga0501046_0053266
487 Ga0501047_0186205
488 Ga0501048_0161267
489 Ga0501070_0053185
490 Ga0501072_0098622
491 Ga0501072_0136751
492 Ga0501074_0088058
493 Ga0501074_0179124
494 Ga0501079_0050031
495 Ga0501079_0169845
496 Ga0501081_0032483
497 Ga0501081_0034328
498 Ga0501035_0140598
499 Ga0501035_0469968
500 Ga0501044_0079627
501 Ga0501044_0166996
502 Ga0501044_0611169
503 Ga0501045_0127206
504 Ga0501045_0335667
505 nmdc:mga05p37_1051346_c1
506 nmdc:mga09592_121573_c1
507 nmdc:mga06r32_27630_c1
508 Ga0495612_0003038
509 Ga0500635_0075853
510 Ga0495595_0031193
511 Ga0495619_0013993
512 Ga0495619_0056092
513 Ga0500641_0010631
514 Ga0500572_010649
515 Ga0500595_002154
516 Ga0500642_0000843
517 Ga0500559_0004906
518 Ga0500568_0001484
519 Ga0500568_0040700
520 Ga0500627_0038773
521 Ga0500636_0066796
522 Ga0500570_074035
523 Ga0500645_017463
524 Ga0501084_0105484
525 Ga0501084_0264805
526 Ga0501082_0015995
527 Ga0501082_0111943
528 Ga0530510_0031310
529 2513657397
530 2513857173
531 2513916650
532 2671119416
533 2857577115
534 8054566182

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08546

ApbA_C

Ketopantoate reductase PanE/ApbA C terminal

219

342

0.95

PF02558

ApbA

Ketopantoate reductase PanE/ApbA

54

198

0.92

PF03807

F420_oxidored

NADP oxidoreductase coenzyme F420-dependent

53

148

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
4ol9-assembly1.cif.gz_A-2 crystal structure of putative 2-dehydropantoate 2-reductase pane from mycobacterium tuberculosis complexed with nadp and oxamate 0.9099 9 299
4s3m-assembly2.cif.gz_A evidence of kinetic cooperativity in dimeric ketopantoate reductase from staphylococcus aureus 0.8855 9 296
4ol9-assembly1.cif.gz_A-2 crystal structure of putative 2-dehydropantoate 2-reductase pane from mycobacterium tuberculosis complexed with nadp and oxamate 0.884 9 299
4yca-assembly1.cif.gz_A evidence of kinetic cooperativity in dimeric ketopantoate reductase from staphylococcus aureus 0.8838 9 300
4yca-assembly1.cif.gz_B evidence of kinetic cooperativity in dimeric ketopantoate reductase from staphylococcus aureus 0.8818 9 300
ID Description Score Start End Superfamily
4ol9A02 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9347 175 299 1.10.1040.10
4s3mA02 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9168 176 296 1.10.1040.10
4ol9A02 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.907 175 299 1.10.1040.10
af_P9WIL1_1_168_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9015 6 174 3.40.50.720
3hn2D02 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9 175 296 1.10.1040.10
ID Description Score Start End GO Terms
AF-A0A1F7TE08-F1-model_v4 2-dehydropantoate 2-reductase (EC 1.1.1.169) (Ketopantoate reductase) 0.953 8 298 GO:0005737
GO:0008677
GO:0015940
AF-A0A552R9Y5-F1-model_v4 2-dehydropantoate 2-reductase (EC 1.1.1.169) (Ketopantoate reductase) 0.9451 8 300 GO:0005737
GO:0008677
GO:0015940
AF-A0A4Y3VAN8-F1-model_v4 2-dehydropantoate 2-reductase (EC 1.1.1.169) (Ketopantoate reductase) 0.9449 1 297 GO:0005737
GO:0008677
GO:0015940
GO:0016020
AF-A0A3N2GPT3-F1-model_v4 2-dehydropantoate 2-reductase (EC 1.1.1.169) (Ketopantoate reductase) 0.9431 7 296 GO:0005737
GO:0008677
GO:0015940
AF-A0A7Y5VI65-F1-model_v4 2-dehydropantoate 2-reductase (EC 1.1.1.169) (Ketopantoate reductase) 0.9411 8 296 GO:0005737
GO:0008677
GO:0015940

Map