F374714

General Info

Members Datasets Scaffolds Average Seq Length
267 198 243 281

Family's Representative Sequence

Representative Sequence 3300009094|Ga0111539_10012581|Ga0111539_100125817
Length 304
Sequence VRRHGSRIIRRQDIALTHPAITADSVAVVTGGAAGIGLAAATRFAEQGLRICIADLGEDRLARAAEVLSAAAPGGADGVMTVAADVSRVDDVRKLESSVRQRFGGTDILMNNAGVQPGSGMFGPDANWERVLAVNLWGVIHGSQVFAPGMIALGRPGLIINTGSKQGITTPPGDPAYNVAKAGVKAFTEALAHELRNVPGGRLSAHLLIPGFVFTALAARGRTGKPPGAWTPQQTVDFMMQRLEAGDFYILCPDNDVPRSLDERRILWAAGDIVENRPALSRWHPDYADAFAAFAAEAGRTRRT

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2511231028 Bradyrhizobium sp. YR681 Isolate Rhizosphere
3 2517572143 Bradyrhizobium elkanii USDA 76 Isolate Nodule
4 2524023228 Bradyrhizobium sp. Th.b2 Isolate Nodule
5 2728368998 Bradyrhizobium macuxiense BR 10303 Isolate Nodule
6 2791355197 Bradyrhizobium sp. C9 Isolate Nodule
7 2842775625 Roseomonas sp. R-71825 Isolate Unclassified
8 2885374607 Bradyrhizobium sp. NAS96.2 Isolate Unclassified
9 2904690495 Bradyrhizobium ivorense CI-1B Isolate Nodule
10 2904699407
11 2906610324
12 2906635258 Bradyrhizobium sp. USDA 3458 Isolate Unclassified
13 2906660503 Bradyrhizobium brasilense UFLA 03-321 Isolate Unclassified
14 2908739725 Bradyrhizobium sp. UFLA03-84 Isolate Nodule
15 2908756301 Bradyrhizobium ivorense CI-41S Isolate Nodule
16 2922425934
17 2935630451 Bradyrhizobium sp. I1.14.4 Isolate Nodule
18 2941507105 Bradyrhizobium sp. i1.12.3 Isolate Nodule
19 2941515067 Bradyrhizobium sp. i1.14.1 Isolate Nodule
20 2941523033 Bradyrhizobium sp. i1.8.4 Isolate Nodule
21 3005474847 Bradyrhizobium sp. CCBAU 53421 Isolate Nodule
22 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
23 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
24 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
25 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
26 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
27 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
28 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
29 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
30 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
31 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
32 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
33 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
34 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
35 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
36 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
37 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
38 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
39 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
40 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
41 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
42 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
43 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
44 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
45 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
46 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
47 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
48 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
49 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
50 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
51 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
52 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
53 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
54 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
55 3300006941 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW Metagenome Nodule
56 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
57 3300006943 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW Metagenome Nodule
58 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
59 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
60 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
61 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
63 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
64 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
65 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
66 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
67 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
68 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
69 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
70 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
71 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
72 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
75 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300027357 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW (SPAdes) (version 2) Metagenome Nodule
95 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
96 3300027363 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW (SPAdes) (version 2) Metagenome Nodule
97 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
99 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300030763 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
103 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
104 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
105 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
106 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
107 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
108 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
109 3300033442 Root nodule microbial communities collected in Santa Monica, California, United States - Edamame nodules 1 Metagenome Nodule
110 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
111 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
112 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
113 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
114 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
115 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
116 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
117 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
118 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
119 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
120 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
121 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
122 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
123 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
124 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
125 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
126 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
127 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
128 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
129 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
130 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
131 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
132 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
133 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
134 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
135 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
136 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
137 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
138 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
139 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
140 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
141 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
142 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
143 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
144 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
145 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
146 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
147 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
148 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
149 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
150 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
151 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
152 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
153 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
154 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
155 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
156 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
157 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
158 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
159 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
160 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
161 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
162 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
163 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
164 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
165 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
166 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
167 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
168 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
169 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
170 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
171 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
172 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
173 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
174 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
175 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
176 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
177 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
178 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
179 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
180 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
181 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
182 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
183 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
184 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
185 3300053124 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 endosphere Metagenome Endosphere
186 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
187 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
188 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
189 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
190 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
191 3300053162 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere Metagenome Endosphere
192 3300053733 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 endosphere Metagenome Endosphere
193 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
194 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
195 8006933436 Bradyrhizobium septentrionale 7(2017) Isolate Unclassified
196 8006973647 Bradyrhizobium septentrionale 162S2 Isolate Nodule
197 8019565922 Bradyrhizobium sp. JR3.5 Isolate Nodule
198 8056689827 Bradyrhizobium semiaridum WSM 1704 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 91.67
Metatranscriptomes 0.38
Isolates 7.95

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.86
Nodule 8.24
Rhizoplane 9.74
Rhizosphere 50.19
Stem 0
Stem Tuber 0
Unclassified 20.97

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_3058900 2162886007 Bacteria 14401
2 JGI25406J46586_10000126 3300003203 Bacteria 33162
3 Ga0055539_1008421 3300003752 Bacteria 1291
4 JGI25405J52794_10001341 3300003911 Bacteria 4029
5 Ga0065165_1019264 3300005262 Bacteria 2444
6 Ga0065704_10000421 3300005289 Bacteria 24733
7 Ga0070670_100332539 3300005331 Bacteria 1332
8 Ga0070666_10080509 3300005335 Bacteria 2226
9 Ga0070682_100237888 3300005337 Bacteria 1306
10 Ga0068868_100483843 3300005338 Bacteria 1082
11 Ga0070691_10130386 3300005341 Bacteria 1274
12 Ga0070668_100004052 3300005347 Bacteria 10848
13 Ga0070668_100234215 3300005347 Bacteria 1519
14 Ga0070669_100001825 3300005353 Bacteria 15341
15 Ga0070667_100002132 3300005367 Bacteria 17450
16 Ga0070700_100022972 3300005441 Bacteria 3645
17 Ga0070663_100063057 3300005455 Bacteria 2675
18 Ga0070706_100500583 3300005467 Bacteria 1130
19 Ga0070695_100000836 3300005545 Bacteria 16627
20 Ga0070665_100004613 3300005548 Bacteria 14405
21 Ga0070665_100023538 3300005548 Bacteria 6201
22 Ga0068864_100001810 3300005618 Bacteria 17539
23 Ga0068863_100055266 3300005841 Bacteria 3759
24 Ga0068863_100072021 3300005841 Bacteria 3270
25 Ga0068858_100002762 3300005842 Bacteria 17640
26 Ga0068858_100093947 3300005842 Bacteria 2793
27 Ga0068860_100000222 3300005843 Bacteria 88724
28 Ga0068860_100015831 3300005843 Bacteria 7362
29 Ga0068860_100118846 3300005843 Bacteria 2530
30 Ga0068862_100020041 3300005844 Bacteria 5583
31 Ga0081455_10000347 3300005937 Bacteria 60756
32 Ga0081455_10000879 3300005937 Bacteria 38878
33 Ga0081539_10000064 3300005985 Bacteria 247020
34 Ga0075363_100004080 3300006048 Bacteria 6325
35 Ga0075364_10069649 3300006051 Bacteria 2315
36 Ga0075370_10031236 3300006353 Bacteria 2973
37 Ga0068871_100172854 3300006358 Bacteria 1853
38 Ga0075428_100046588 3300006844 Bacteria 4762
39 Ga0075428_100061548 3300006844 Bacteria 4111
40 Ga0075430_100136712 3300006846 Bacteria 2042
41 Ga0075431_100007931 3300006847 Bacteria 10583
42 Ga0075429_100097198 3300006880 Bacteria 2569
43 Ga0099825_1035686 3300006941 Bacteria 1760
44 Ga0099824_1012493 3300006942 Bacteria 9233
45 Ga0099822_1012599 3300006943 Bacteria 10082
46 Ga0099794_10008271 3300007265 Bacteria 4312
47 Ga0105250_10026806 3300009092 Bacteria 2322
48 Ga0105240_10059238 3300009093 Bacteria 4780
49 Ga0105240_10515721 3300009093 Bacteria 1327
50 Ga0111539_10012581 3300009094 Bacteria 10601
51 Ga0105247_10028139 3300009101 Bacteria 3400
52 Ga0105247_10034487 3300009101 Bacteria 3082
53 Ga0114129_10011114 3300009147 Bacteria 12830
54 Ga0114129_10121069 3300009147 Bacteria 3602
55 Ga0105248_10132354 3300009177 Bacteria 2814
56 Ga0105237_10144176 3300009545 Bacteria 2376
57 Ga0105249_10063397 3300009553 Bacteria 3396
58 Ga0105246_10097210 3300011119 Bacteria 2136
59 Ga0105246_10253699 3300011119 Bacteria 1397
60 Ga0163162_10001328 3300013306 Bacteria 23105
61 Ga0163162_10029302 3300013306 Bacteria 5447
62 Ga0163163_10117223 3300014325 Bacteria 2694
63 Ga0213876_10002285 3300021384 Bacteria 11307
64 Ga0213871_10018395 3300021441 Bacteria 1709
65 Ga0209677_100530 3300025253 Bacteria 21242
66 Ga0209148_1000547 3300025254 Bacteria 35927
67 Ga0209233_1008372 3300025261 Bacteria 3206
68 Ga0209455_1000568 3300025272 Bacteria 24547
69 Ga0209050_1043685 3300025298 Bacteria 1209
70 Ga0207697_10018784 3300025315 Bacteria 2833
71 Ga0207713_1014933 3300025735 Bacteria 4007
72 Ga0207710_10022653 3300025900 Bacteria 2697
73 Ga0207688_10080026 3300025901 Bacteria 1864
74 Ga0207680_10042589 3300025903 Bacteria 2657
75 Ga0207647_10121334 3300025904 Bacteria 1541
76 Ga0207695_10044266 3300025913 Bacteria 4735
77 Ga0207681_10000404 3300025923 Bacteria 30024
78 Ga0207681_10121886 3300025923 Bacteria 1913
79 Ga0207711_10301993 3300025941 Bacteria 1477
80 Ga0207712_10001083 3300025961 Bacteria 19051
81 Ga0207658_10000597 3300025986 Bacteria 32314
82 Ga0207703_10000530 3300026035 Bacteria 39281
83 Ga0207703_10109759 3300026035 Bacteria 2352
84 Ga0207703_10244037 3300026035 Bacteria 1616
85 Ga0207678_10110286 3300026067 Bacteria 2347
86 Ga0207708_10053152 3300026075 Bacteria 3085
87 Ga0207641_10004767 3300026088 Bacteria 11694
88 Ga0207676_10000141 3300026095 Bacteria 62869
89 Ga0207683_10081571 3300026121 Bacteria 2871
90 Ga0207683_10472452 3300026121 Bacteria 1157
91 Ga0209589_1000005 3300027357 Bacteria 530958
92 Ga0209489_100005 3300027361 Bacteria 530958
93 Ga0209700_100006 3300027363 Bacteria 530958
94 Ga0209588_1007705 3300027671 Bacteria 3177
95 Ga0207428_10029371 3300027907 Bacteria 4558
96 Ga0268266_10004172 3300028379 Bacteria 13934
97 Ga0268266_10004277 3300028379 Bacteria 13744
98 Ga0268265_10009435 3300028380 Bacteria 6589
99 Ga0268265_10422842 3300028380 Bacteria 1237
100 Ga0268264_10000042 3300028381 Bacteria 372069
101 Ga0268264_10035361 3300028381 Bacteria 4112
102 Ga0268264_10036155 3300028381 Bacteria 4067
103 Ga0268264_10180920 3300028381 Bacteria 1915
104 Ga0265763_1004119 3300030763 Bacteria 1180
105 Ga0265316_10042514 3300031344 Bacteria 3632
106 Ga0307513_10235271 3300031456 Bacteria 1641
107 Ga0307509_10012863 3300031507 Bacteria 9956
108 Ga0307509_10046448 3300031507 Bacteria 4675
109 Ga0307509_10204099 3300031507 Bacteria 1809
110 Ga0307508_10142797 3300031616 Bacteria 1998
111 Ga0307516_10020011 3300031730 Bacteria 6920
112 Ga0307516_10143646 3300031730 Bacteria 2153
113 Ga0307507_10293310 3300033179 Bacteria 1004
114 Ga0315911_1000005 3300033442 Bacteria 426255
115 Ga0373954_0044263 3300035118 Bacteria 2077
116 Ga0373935_0049985 3300035692 Bacteria 2652
117 Ga0373927_0001354 3300035695 Bacteria 18459
118 Ga0373925_0026066 3300037068 Bacteria 4275
119 Ga0395900_0065616 3300037418 Bacteria 3730
120 Ga0395905_0346236 3300037471 Bacteria 1378
121 Ga0395905_0662952 3300037471 Bacteria 945
122 Ga0436365_0002997 3300039437 Bacteria 2579
123 Ga0436365_0872060 3300039437 Bacteria 12170
124 Ga0436365_1303323 3300039437 Bacteria 11907
125 Ga0436360_1058941 3300039438 Bacteria 4205
126 Ga0436361_0121145 3300039447 Bacteria 5697
127 Ga0436361_1108154 3300039447 Bacteria 2073
128 Ga0436361_1174469 3300039447 Bacteria 5212
129 Ga0436363_1492614 3300039450 Bacteria 4433
130 Ga0436362_0385687 3300039453 Bacteria 1450
131 Ga0436362_0512642 3300039453 Bacteria 5732
132 Ga0439464_0005281 3300042439 Bacteria 3334
133 Ga0466969_0130238 3300044656 Bacteria 1167
134 Ga0466959_0055996 3300045049 Bacteria 2878
135 Ga0495603_0033433 3300046455 Bacteria 3094
136 Ga0495629_0025951 3300046459 Bacteria 4163
137 Ga0495641_0035901 3300046461 Bacteria 2332
138 Ga0495653_0193006 3300046463 Bacteria 1388
139 Ga0495580_0015406 3300046472 Bacteria 5766
140 Ga0495582_0062527 3300046473 Bacteria 2056
141 Ga0495664_0010988 3300046477 Bacteria 5095
142 Ga0495584_0041902 3300046491 Bacteria 2311
143 Ga0495628_0199201 3300046516 Bacteria 1509
144 Ga0495630_0081740 3300046517 Bacteria 2438
145 Ga0495666_0045502 3300046526 Bacteria 2117
146 Ga0495652_0182814 3300046529 Bacteria 1607
147 Ga0495634_0007849 3300046642 Bacteria 7974
148 Ga0495658_0033009 3300046683 Bacteria 2831
149 Ga0495660_0204537 3300046810 Bacteria 941
150 Ga0495581_0002254 3300047315 Bacteria 10849
151 Ga0495684_0052198 3300047471 Bacteria 3120
152 Ga0495686_0232978 3300047472 Bacteria 1042
153 Ga0496100_0002647 3300048903 Bacteria 9135
154 Ga0496100_0248525 3300048903 Bacteria 1315
155 Ga0496101_0013680 3300048904 Bacteria 5442
156 Ga0496101_0201241 3300048904 Bacteria 1540
157 Ga0496102_0000109 3300048905 Bacteria 117315
158 Ga0496102_0007957 3300048905 Bacteria 9059
159 Ga0496102_0595334 3300048905 Bacteria 1029
160 Ga0496103_0000181 3300048906 Bacteria 64065
161 Ga0496103_0003420 3300048906 Bacteria 9701
162 Ga0496103_0107979 3300048906 Bacteria 1766
163 Ga0496104_0005091 3300048907 Bacteria 11467
164 Ga0496104_0016849 3300048907 Bacteria 6643
165 Ga0496104_0283283 3300048907 Bacteria 1570
166 Ga0496105_0000388 3300048908 Bacteria 28875
167 Ga0496105_0000428 3300048908 Bacteria 27607
168 Ga0496106_0001224 3300048909 Bacteria 19217
169 Ga0496107_0405373 3300048910 Bacteria 1014
170 Ga0496111_0039576 3300048914 Bacteria 3381
171 Ga0496112_0023407 3300048915 Bacteria 5902
172 Ga0496112_0140778 3300048915 Bacteria 2382
173 Ga0496113_0000041 3300048916 Bacteria 53534
174 Ga0496114_0024322 3300048917 Bacteria 4943
175 Ga0496114_0564965 3300048917 Bacteria 1004
176 Ga0496115_0000042 3300048918 Bacteria 118348
177 Ga0496115_0313029 3300048918 Bacteria 1285
178 Ga0496115_0437915 3300048918 Bacteria 1057
179 Ga0496116_0051047 3300048919 Bacteria 2750
180 Ga0496116_0146425 3300048919 Bacteria 1320
181 Ga0496117_0000398 3300048920 Bacteria 74273
182 Ga0496117_0001905 3300048920 Bacteria 27997
183 Ga0496117_0131404 3300048920 Bacteria 1517
184 Ga0496118_0000109 3300048921 Bacteria 153067
185 Ga0496118_0004137 3300048921 Bacteria 17544
186 Ga0496118_0009929 3300048921 Bacteria 9509
187 Ga0496118_0111178 3300048921 Bacteria 1817
188 Ga0496119_0001532 3300048922 Bacteria 27609
189 Ga0496119_0006564 3300048922 Bacteria 10727
190 Ga0496120_0009479 3300048923 Bacteria 6901
191 Ga0496121_0000687 3300048924 Bacteria 63021
192 Ga0496121_0003566 3300048924 Bacteria 21998
193 Ga0496121_0003573 3300048924 Bacteria 21976
194 Ga0496121_0022811 3300048924 Bacteria 6051
195 Ga0496121_0023673 3300048924 Bacteria 5904
196 Ga0496121_0062044 3300048924 Bacteria 3064
197 Ga0496121_0159544 3300048924 Bacteria 1651
198 Ga0496122_0002294 3300048925 Bacteria 27639
199 Ga0496122_0193826 3300048925 Bacteria 1196
200 Ga0496123_0001867 3300048926 Bacteria 27609
201 Ga0496124_0000201 3300048927 Bacteria 117658
202 Ga0496124_0005368 3300048927 Bacteria 14473
203 Ga0496124_0007099 3300048927 Bacteria 12000
204 Ga0496125_0004518 3300048928 Bacteria 15992
205 Ga0496125_0010128 3300048928 Bacteria 9564
206 Ga0496126_0000654 3300048929 Bacteria 64276
207 Ga0496126_0002130 3300048929 Bacteria 27609
208 Ga0496126_0011379 3300048929 Bacteria 9219
209 Ga0496126_0029455 3300048929 Bacteria 5215
210 Ga0496126_0035872 3300048929 Bacteria 4642
211 Ga0496126_0055125 3300048929 Bacteria 3598
212 Ga0496126_0081123 3300048929 Bacteria 2869
213 Ga0496126_0528557 3300048929 Bacteria 939
214 Ga0501039_0119854 3300049575 Bacteria 2061
215 Ga0501041_0338984 3300049577 Bacteria 949
216 Ga0501079_0219794 3300049741 Bacteria 1484
217 Ga0501045_0054345 3300049824 Bacteria 2927
218 nmdc:mga03n38_547_c1 3300050490 Bacteria 9538
219 nmdc:mga0yw44_147455_c1 3300050492 Bacteria 1533
220 nmdc:mga07m45_23465_c2 3300050496 Bacteria 2981
221 nmdc:mga05p37_6975_c1 3300050507 Bacteria 13317
222 nmdc:mga05p37_90839_c1 3300050507 Bacteria 3763
223 nmdc:mga09592_6636_c1 3300050508 Bacteria 9425
224 nmdc:mga0qj67_129584_c1 3300050509 Bacteria 2043
225 nmdc:mga06r32_2030_c1 3300050510 Bacteria 18091
226 nmdc:mga08y16_18605_c1 3300050511 Bacteria 7318
227 Ga0500635_0023563 3300053080 Bacteria 1922
228 Ga0500644_0061081 3300053088 Bacteria 1328
229 Ga0500583_0017410 3300053092 Bacteria 2894
230 Ga0500641_0014600 3300053096 Bacteria 2901
231 Ga0500554_034497 3300053102 Bacteria 1515
232 Ga0500556_0004906 3300053104 Bacteria 3788
233 Ga0500595_003577 3300053119 Bacteria 7221
234 Ga0500617_083082 3300053124 Bacteria 1383
235 Ga0500658_0104397 3300053134 Bacteria 1240
236 Ga0500568_0023304 3300053139 Bacteria 2634
237 Ga0500588_0001647 3300053146 Bacteria 4320
238 Ga0500603_008281 3300053150 Bacteria 2301
239 Ga0500616_0014497 3300053153 Bacteria 4529
240 Ga0500638_036817 3300053162 Bacteria 2373
241 Ga0500552_008654 3300053733 Bacteria 1207
242 Ga0501084_0297988 3300054114 Bacteria 1362
243 Ga0500661_011466 3300055283 Bacteria 1603

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300053096 Ga0500641_0014600 Ga0500641_0014600_48_797 243
2 3300048919 Ga0496116_0051047 Ga0496116_0051047_1982_2722 245
3 3300048929 Ga0496126_0528557 Ga0496126_0528557_10_762 245
4 3300048905 Ga0496102_0595334 Ga0496102_0595334_204_977 252
5 3300037418 Ga0395900_0065616 Ga0395900_0065616_1951_2802 253
6 3300037471 Ga0395905_0346236 Ga0395905_0346236_507_1358 253
7 3300031507 Ga0307509_10046448 Ga0307509_100464485 264
8 3300037471 Ga0395905_0662952 Ga0395905_0662952_62_877 266
9 3300039447 Ga0436361_1108154 Ga0436361_1108154_433_1296 266
10 3300039453 Ga0436362_0385687 Ga0436362_0385687_560_1393 266
11 3300044656 Ga0466969_0130238 Ga0466969_0130238_300_1112 266
12 3300045049 Ga0466959_0055996 Ga0466959_0055996_1956_2768 266
13 3300006844 Ga0075428_100046588 Ga0075428_1000465884 267
14 3300009147 Ga0114129_10121069 Ga0114129_101210693 267
15 3300046491 Ga0495584_0041902 Ga0495584_0041902_136_1050 267
16 3300050507 nmdc:mga05p37_90839_c1 nmdc:mga05p37_90839_c1_1642_2556 267
17 3300039447 Ga0436361_1174469 Ga0436361_1174469_3385_4254 270
18 3300005331 Ga0070670_100332539 Ga0070670_1003325391 271
19 3300025923 Ga0207681_10121886 Ga0207681_101218861 271
20 3300053080 Ga0500635_0023563 Ga0500635_0023563_205_1059 271
21 3300053102 Ga0500554_034497 Ga0500554_034497_482_1336 271
22 3300053150 Ga0500603_008281 Ga0500603_008281_260_1114 271
23 3300054114 Ga0501084_0297988 Ga0501084_0297988_480_1331 271
24 3300005841 Ga0068863_100055266 Ga0068863_1000552665 273
25 3300005843 Ga0068860_100118846 Ga0068860_1001188463 273
26 3300005844 Ga0068862_100020041 Ga0068862_1000200413 273
27 3300007265 Ga0099794_10008271 Ga0099794_100082714 273
28 3300009093 Ga0105240_10059238 Ga0105240_100592383 273
29 3300009101 Ga0105247_10034487 Ga0105247_100344873 273
30 3300009553 Ga0105249_10063397 Ga0105249_100633973 273
31 3300025900 Ga0207710_10022653 Ga0207710_100226532 273
32 3300025961 Ga0207712_10001083 Ga0207712_1000108318 273
33 3300026088 Ga0207641_10004767 Ga0207641_100047674 273
34 3300028380 Ga0268265_10009435 Ga0268265_100094357 273
35 3300028381 Ga0268264_10035361 Ga0268264_100353614 273
36 3300035118 Ga0373954_0044263 Ga0373954_0044263_464_1300 273
37 3300035692 Ga0373935_0049985 Ga0373935_0049985_849_1685 273
38 3300035695 Ga0373927_0001354 Ga0373927_0001354_15993_16829 273
39 3300039437 Ga0436365_0002997 Ga0436365_0002997_672_1505 273
40 3300039437 Ga0436365_0872060 Ga0436365_0872060_4066_4896 273
41 3300039437 Ga0436365_1303323 Ga0436365_1303323_8481_9317 273
42 3300039450 Ga0436363_1492614 Ga0436363_1492614_1807_2640 273
43 3300039453 Ga0436362_0512642 Ga0436362_0512642_1591_2427 273
44 3300046455 Ga0495603_0033433 Ga0495603_0033433_1984_2820 273
45 3300046459 Ga0495629_0025951 Ga0495629_0025951_1175_2011 273
46 3300046461 Ga0495641_0035901 Ga0495641_0035901_1222_2058 273
47 3300046463 Ga0495653_0193006 Ga0495653_0193006_129_965 273
48 3300046472 Ga0495580_0015406 Ga0495580_0015406_1302_2138 273
49 3300046473 Ga0495582_0062527 Ga0495582_0062527_82_918 273
50 3300046477 Ga0495664_0010988 Ga0495664_0010988_654_1490 273
51 3300046516 Ga0495628_0199201 Ga0495628_0199201_326_1162 273
52 3300046517 Ga0495630_0081740 Ga0495630_0081740_492_1328 273
53 3300046526 Ga0495666_0045502 Ga0495666_0045502_1131_1967 273
54 3300046529 Ga0495652_0182814 Ga0495652_0182814_507_1343 273
55 3300046642 Ga0495634_0007849 Ga0495634_0007849_3467_4303 273
56 3300046683 Ga0495658_0033009 Ga0495658_0033009_1362_2198 273
57 3300047315 Ga0495581_0002254 Ga0495581_0002254_3407_4243 273
58 3300047471 Ga0495684_0052198 Ga0495684_0052198_1170_2006 273
59 3300047472 Ga0495686_0232978 Ga0495686_0232978_119_952 273
60 3300048903 Ga0496100_0248525 Ga0496100_0248525_52_888 273
61 3300048918 Ga0496115_0437915 Ga0496115_0437915_206_1045 273
62 3300048921 Ga0496118_0111178 Ga0496118_0111178_59_895 273
63 3300048924 Ga0496121_0003566 Ga0496121_0003566_12044_12880 273
64 3300048929 Ga0496126_0011379 Ga0496126_0011379_5817_6656 273
65 3300053119 Ga0500595_003577 Ga0500595_003577_4221_5054 273
66 3300053139 Ga0500568_0023304 Ga0500568_0023304_273_1109 273
67 iso_pu_bacteria 2511231028 2511401376 273
68 iso_pu_bacteria 2517572143 2517889969 274
69 iso_pu_bacteria 2524023228 2524534985 274
70 iso_pu_bacteria 2728368998 2728749121 274
71 iso_pu_bacteria 2791355197 2793068064 274
72 iso_pu_bacteria 2842775625 2842778008 274
73 iso_pu_bacteria 2885374607 2885377388 274
74 iso_pu_bacteria 2904690495 2904692605 274
75 iso_pu_bacteria 2904699407 2904711051 274
76 iso_pu_bacteria 2906610324 2906612277 274
77 iso_pu_bacteria 2906635258 2906638381 274
78 iso_pu_bacteria 2906660503 2906663334 274
79 iso_pu_bacteria 2908739725 2908739854 274
80 iso_pu_bacteria 2908756301 2908757815 274
81 iso_pu_bacteria 2922425934 2922427027 274
82 iso_pu_bacteria 2935630451 2935633174 274
83 iso_pu_bacteria 2941507105 2941509524 274
84 iso_pu_bacteria 2941515067 2941517353 274
85 iso_pu_bacteria 2941523033 2941526694 274
86 iso_pu_bacteria 3005474847 3005476204 274
87 iso_pu_bacteria 8006933436 8006937511 274
88 iso_pu_bacteria 8006973647 8006977539 274
89 iso_pu_bacteria 8019565922 8019571188 274
90 iso_pu_bacteria 8056689827 8056694811 274
91 3300053153 Ga0500616_0014497 Ga0500616_0014497_2627_3472 276
92 3300005937 Ga0081455_10000347 Ga0081455_1000034759 277
93 3300021441 Ga0213871_10018395 Ga0213871_100183952 277
94 3300025254 Ga0209148_1000547 Ga0209148_100054738 277
95 3300025272 Ga0209455_1000568 Ga0209455_100056822 277
96 3300026121 Ga0207683_10081571 Ga0207683_100815713 277
97 3300028381 Ga0268264_10180920 Ga0268264_101809202 277
98 3300039438 Ga0436360_1058941 Ga0436360_1058941_2478_3326 277
99 3300048924 Ga0496121_0159544 Ga0496121_0159544_342_1187 277
100 3300048929 Ga0496126_0029455 Ga0496126_0029455_533_1384 277
101 3300048929 Ga0496126_0055125 Ga0496126_0055125_700_1551 277
102 3300055283 Ga0500661_011466 Ga0500661_011466_529_1374 277
103 3300003203 JGI25406J46586_10000126 JGI25406J46586_1000012622 278
104 3300003752 Ga0055539_1008421 Ga0055539_10084211 278
105 3300003911 JGI25405J52794_10001341 JGI25405J52794_100013413 278
106 3300005262 Ga0065165_1019264 Ga0065165_10192642 278
107 3300005337 Ga0070682_100237888 Ga0070682_1002378881 278
108 3300005338 Ga0068868_100483843 Ga0068868_1004838431 278
109 3300005341 Ga0070691_10130386 Ga0070691_101303861 278
110 3300005347 Ga0070668_100234215 Ga0070668_1002342152 278
111 3300005441 Ga0070700_100022972 Ga0070700_1000229722 278
112 3300005455 Ga0070663_100063057 Ga0070663_1000630573 278
113 3300005467 Ga0070706_100500583 Ga0070706_1005005832 278
114 3300005545 Ga0070695_100000836 Ga0070695_1000008363 278
115 3300005548 Ga0070665_100023538 Ga0070665_1000235382 278
116 3300005618 Ga0068864_100001810 Ga0068864_10000181013 278
117 3300005841 Ga0068863_100072021 Ga0068863_1000720212 278
118 3300005842 Ga0068858_100002762 Ga0068858_10000276213 278
119 3300005842 Ga0068858_100093947 Ga0068858_1000939472 278
120 3300005843 Ga0068860_100000222 Ga0068860_10000022230 278
121 3300005937 Ga0081455_10000879 Ga0081455_100008795 278
122 3300005985 Ga0081539_10000064 Ga0081539_10000064114 278
123 3300006048 Ga0075363_100004080 Ga0075363_1000040801 278
124 3300006051 Ga0075364_10069649 Ga0075364_100696491 278
125 3300006353 Ga0075370_10031236 Ga0075370_100312364 278
126 3300006358 Ga0068871_100172854 Ga0068871_1001728543 278
127 3300006844 Ga0075428_100061548 Ga0075428_1000615484 278
128 3300006846 Ga0075430_100136712 Ga0075430_1001367122 278
129 3300006847 Ga0075431_100007931 Ga0075431_1000079318 278
130 3300006880 Ga0075429_100097198 Ga0075429_1000971981 278
131 3300006941 Ga0099825_1035686 Ga0099825_10356862 278
132 3300006942 Ga0099824_1012493 Ga0099824_10124937 278
133 3300006943 Ga0099822_1012599 Ga0099822_10125997 278
134 3300009545 Ga0105237_10144176 Ga0105237_101441762 278
135 3300011119 Ga0105246_10097210 Ga0105246_100972103 278
136 3300011119 Ga0105246_10253699 Ga0105246_102536992 278
137 3300013306 Ga0163162_10001328 Ga0163162_1000132810 278
138 3300021384 Ga0213876_10002285 Ga0213876_100022858 278
139 3300025253 Ga0209677_100530 Ga0209677_10053016 278
140 3300025261 Ga0209233_1008372 Ga0209233_10083722 278
141 3300025298 Ga0209050_1043685 Ga0209050_10436852 278
142 3300025315 Ga0207697_10018784 Ga0207697_100187842 278
143 3300025901 Ga0207688_10080026 Ga0207688_100800262 278
144 3300025904 Ga0207647_10121334 Ga0207647_101213342 278
145 3300025913 Ga0207695_10044266 Ga0207695_100442662 278
146 3300026035 Ga0207703_10000530 Ga0207703_1000053011 278
147 3300026035 Ga0207703_10109759 Ga0207703_101097592 278
148 3300026035 Ga0207703_10244037 Ga0207703_102440371 278
149 3300026067 Ga0207678_10110286 Ga0207678_101102862 278
150 3300026075 Ga0207708_10053152 Ga0207708_100531521 278
151 3300026095 Ga0207676_10000141 Ga0207676_1000014140 278
152 3300026121 Ga0207683_10472452 Ga0207683_104724521 278
153 3300027357 Ga0209589_1000005 Ga0209589_1000005376 278
154 3300027361 Ga0209489_100005 Ga0209489_100005376 278
155 3300027363 Ga0209700_100006 Ga0209700_100006376 278
156 3300027671 Ga0209588_1007705 Ga0209588_10077052 278
157 3300027907 Ga0207428_10029371 Ga0207428_100293712 278
158 3300028379 Ga0268266_10004277 Ga0268266_1000427713 278
159 3300028381 Ga0268264_10000042 Ga0268264_10000042129 278
160 3300031344 Ga0265316_10042514 Ga0265316_100425143 278
161 3300031456 Ga0307513_10235271 Ga0307513_102352711 278
162 3300031507 Ga0307509_10012863 Ga0307509_100128638 278
163 3300031507 Ga0307509_10204099 Ga0307509_102040992 278
164 3300031616 Ga0307508_10142797 Ga0307508_101427973 278
165 3300031730 Ga0307516_10020011 Ga0307516_100200114 278
166 3300031730 Ga0307516_10143646 Ga0307516_101436462 278
167 3300033179 Ga0307507_10293310 Ga0307507_102933101 278
168 3300033442 Ga0315911_1000005 Ga0315911_1000005376 278
169 3300037068 Ga0373925_0026066 Ga0373925_0026066_1644_2498 278
170 3300046810 Ga0495660_0204537 Ga0495660_0204537_16_870 278
171 3300048906 Ga0496103_0107979 Ga0496103_0107979_799_1653 278
172 3300048909 Ga0496106_0001224 Ga0496106_0001224_12330_13184 278
173 3300048919 Ga0496116_0146425 Ga0496116_0146425_353_1204 278
174 3300048920 Ga0496117_0131404 Ga0496117_0131404_441_1292 278
175 3300048921 Ga0496118_0009929 Ga0496118_0009929_6687_7541 278
176 3300048924 Ga0496121_0003573 Ga0496121_0003573_14083_14937 278
177 3300048924 Ga0496121_0023673 Ga0496121_0023673_2397_3251 278
178 3300048924 Ga0496121_0062044 Ga0496121_0062044_1626_2477 278
179 3300048925 Ga0496122_0193826 Ga0496122_0193826_111_962 278
180 3300048927 Ga0496124_0007099 Ga0496124_0007099_5089_5943 278
181 3300048928 Ga0496125_0010128 Ga0496125_0010128_6613_7467 278
182 3300048929 Ga0496126_0035872 Ga0496126_0035872_2504_3358 278
183 3300048929 Ga0496126_0081123 Ga0496126_0081123_1713_2567 278
184 3300049575 Ga0501039_0119854 Ga0501039_0119854_384_1238 278
185 3300049577 Ga0501041_0338984 Ga0501041_0338984_83_937 278
186 3300049741 Ga0501079_0219794 Ga0501079_0219794_573_1427 278
187 3300049824 Ga0501045_0054345 Ga0501045_0054345_1076_1930 278
188 3300053088 Ga0500644_0061081 Ga0500644_0061081_46_903 278
189 3300053162 Ga0500638_036817 Ga0500638_036817_19_873 278
190 3300053733 Ga0500552_008654 Ga0500552_008654_73_927 278
191 2162886007 SwRhRL2b_contig_3058900 SwRhRL2b_0362.00008830 279
192 3300005289 Ga0065704_10000421 Ga0065704_100004216 279
193 3300005335 Ga0070666_10080509 Ga0070666_100805091 279
194 3300005347 Ga0070668_100004052 Ga0070668_1000040529 279
195 3300005353 Ga0070669_100001825 Ga0070669_10000182511 279
196 3300005367 Ga0070667_100002132 Ga0070667_10000213213 279
197 3300005548 Ga0070665_100004613 Ga0070665_1000046135 279
198 3300005843 Ga0068860_100015831 Ga0068860_1000158318 279
199 3300009092 Ga0105250_10026806 Ga0105250_100268062 279
200 3300009093 Ga0105240_10515721 Ga0105240_105157211 279
201 3300009094 Ga0111539_10012581 Ga0111539_100125817 279
202 3300009101 Ga0105247_10028139 Ga0105247_100281394 279
203 3300009147 Ga0114129_10011114 Ga0114129_100111145 279
204 3300009177 Ga0105248_10132354 Ga0105248_101323544 279
205 3300013306 Ga0163162_10029302 Ga0163162_100293025 279
206 3300014325 Ga0163163_10117223 Ga0163163_101172233 279
207 3300025735 Ga0207713_1014933 Ga0207713_10149333 279
208 3300025903 Ga0207680_10042589 Ga0207680_100425893 279
209 3300025923 Ga0207681_10000404 Ga0207681_100004049 279
210 3300025941 Ga0207711_10301993 Ga0207711_103019932 279
211 3300025986 Ga0207658_10000597 Ga0207658_1000059711 279
212 3300028379 Ga0268266_10004172 Ga0268266_100041729 279
213 3300028380 Ga0268265_10422842 Ga0268265_104228422 279
214 3300028381 Ga0268264_10036155 Ga0268264_100361553 279
215 3300030763 Ga0265763_1004119 Ga0265763_10041191 279
216 3300039447 Ga0436361_0121145 Ga0436361_0121145_1289_2143 279
217 3300042439 Ga0439464_0005281 Ga0439464_0005281_2043_2957 279
218 3300048903 Ga0496100_0002647 Ga0496100_0002647_4834_5673 279
219 3300048904 Ga0496101_0013680 Ga0496101_0013680_4233_5072 279
220 3300048904 Ga0496101_0201241 Ga0496101_0201241_233_1075 279
221 3300048905 Ga0496102_0000109 Ga0496102_0000109_57768_58610 279
222 3300048905 Ga0496102_0007957 Ga0496102_0007957_2573_3412 279
223 3300048906 Ga0496103_0000181 Ga0496103_0000181_58706_59548 279
224 3300048906 Ga0496103_0003420 Ga0496103_0003420_4620_5459 279
225 3300048907 Ga0496104_0005091 Ga0496104_0005091_4557_5396 279
226 3300048907 Ga0496104_0016849 Ga0496104_0016849_4267_5109 279
227 3300048907 Ga0496104_0283283 Ga0496104_0283283_628_1485 279
228 3300048908 Ga0496105_0000388 Ga0496105_0000388_17466_18308 279
229 3300048908 Ga0496105_0000428 Ga0496105_0000428_22340_23179 279
230 3300048910 Ga0496107_0405373 Ga0496107_0405373_96_953 279
231 3300048914 Ga0496111_0039576 Ga0496111_0039576_1794_2633 279
232 3300048915 Ga0496112_0023407 Ga0496112_0023407_2464_3303 279
233 3300048915 Ga0496112_0140778 Ga0496112_0140778_1215_2072 279
234 3300048916 Ga0496113_0000041 Ga0496113_0000041_22445_23284 279
235 3300048917 Ga0496114_0024322 Ga0496114_0024322_1929_2771 279
236 3300048917 Ga0496114_0564965 Ga0496114_0564965_136_993 279
237 3300048918 Ga0496115_0000042 Ga0496115_0000042_57961_58803 279
238 3300048918 Ga0496115_0313029 Ga0496115_0313029_183_1040 279
239 3300048920 Ga0496117_0000398 Ga0496117_0000398_57816_58658 279
240 3300048920 Ga0496117_0001905 Ga0496117_0001905_4624_5463 279
241 3300048921 Ga0496118_0000109 Ga0496118_0000109_58024_58866 279
242 3300048921 Ga0496118_0004137 Ga0496118_0004137_12082_12921 279
243 3300048922 Ga0496119_0001532 Ga0496119_0001532_4430_5269 279
244 3300048922 Ga0496119_0006564 Ga0496119_0006564_4430_5272 279
245 3300048923 Ga0496120_0009479 Ga0496120_0009479_3832_4671 279
246 3300048924 Ga0496121_0000687 Ga0496121_0000687_4382_5224 279
247 3300048924 Ga0496121_0022811 Ga0496121_0022811_4519_5358 279
248 3300048925 Ga0496122_0002294 Ga0496122_0002294_4445_5284 279
249 3300048926 Ga0496123_0001867 Ga0496123_0001867_4430_5269 279
250 3300048927 Ga0496124_0000201 Ga0496124_0000201_57836_58678 279
251 3300048927 Ga0496124_0005368 Ga0496124_0005368_4566_5405 279
252 3300048928 Ga0496125_0004518 Ga0496125_0004518_10597_11436 279
253 3300048929 Ga0496126_0000654 Ga0496126_0000654_58858_59700 279
254 3300048929 Ga0496126_0002130 Ga0496126_0002130_4430_5269 279
255 3300050490 nmdc:mga03n38_547_c1 nmdc:mga03n38_547_c1_6909_7766 279
256 3300050492 nmdc:mga0yw44_147455_c1 nmdc:mga0yw44_147455_c1_601_1458 279
257 3300050496 nmdc:mga07m45_23465_c2 nmdc:mga07m45_23465_c2_1673_2530 279
258 3300050507 nmdc:mga05p37_6975_c1 nmdc:mga05p37_6975_c1_3589_4503 279
259 3300050508 nmdc:mga09592_6636_c1 nmdc:mga09592_6636_c1_175_1089 279
260 3300050509 nmdc:mga0qj67_129584_c1 nmdc:mga0qj67_129584_c1_867_1781 279
261 3300050510 nmdc:mga06r32_2030_c1 nmdc:mga06r32_2030_c1_1532_2446 279
262 3300050511 nmdc:mga08y16_18605_c1 nmdc:mga08y16_18605_c1_4182_5096 279
263 3300053092 Ga0500583_0017410 Ga0500583_0017410_279_1163 279
264 3300053104 Ga0500556_0004906 Ga0500556_0004906_2601_3485 279
265 3300053124 Ga0500617_083082 Ga0500617_083082_406_1290 279
266 3300053134 Ga0500658_0104397 Ga0500658_0104397_136_1020 279
267 3300053146 Ga0500588_0001647 Ga0500588_0001647_1954_2838 279

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

25

225

0.93

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

31

235

0.84

PF08659

KR

KR domain

25

200

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
8g9v-assembly3.cif.gz_F crystal structures of 17-beta-hydroxysteroid dehydrogenase 13 0.926 9 233
8g9v-assembly4.cif.gz_G crystal structures of 17-beta-hydroxysteroid dehydrogenase 13 0.9239 3 233
8g9v-assembly2.cif.gz_C crystal structures of 17-beta-hydroxysteroid dehydrogenase 13 0.923 9 233
3tfo-assembly1.cif.gz_B crystal structure of a putative 3-oxoacyl-(acyl-carrier-protein) reductase from sinorhizobium meliloti 0.9227 11 226
3tfo-assembly1.cif.gz_D crystal structure of a putative 3-oxoacyl-(acyl-carrier-protein) reductase from sinorhizobium meliloti 0.9201 11 226
ID Description Score Start End Superfamily
af_K7KS65_46_105_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9372 27 80 3.40.50.720
af_Q54N15_5_159_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9313 67 179 3.40.50.720
af_Q2FVE2_1_206_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9281 66 202 3.40.50.720
3tfoB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9227 11 226 3.40.50.720
af_C6T421_12_106_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9191 9 91 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A1A2N6M4-F1-model_v4 Dehydrogenase 0.9404 7 200 GO:0016491
AF-A0A150KKH7-F1-model_v4 Cyclopentanol dehydrogenase (EC 1.1.1.163) 0.9372 9 203 GO:0055041
AF-A0A6L7ECE3-F1-model_v4 deleted 0.9369 9 173
AF-A0A3D0I012-F1-model_v4 Acetoin dehydrogenase 0.9363 9 124 GO:0016616
AF-A0A7C7KED1-F1-model_v4 deleted 0.9358 12 186

Feature Viewer

pLDDT pTM Quality
94.48 0.92 High
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Predicted Structure (AlphaFold2)

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