F374226

General Info

Members Datasets Scaffolds Average Seq Length
266 142 522 406

Family's Representative Sequence

Representative Sequence 3300039438|Ga0436360_0028713|Ga0436360_0028713_1442_2872
Length 476
Sequence VRVISYFAAKWHLGVAVPMLVGTALGGVGWPGYSAWTRNQRVGARRRTVDRSTRVQSPVWAKLEKGEGAMPATRISDDMFTPDVIADPYSYYGRIREQDPVHWNETYELWAVTGYADVVWMTRHHELFSSAVFRNDPRPPYPAIDESDLGLYEYVRNYQADQLVQRDRPEHLAMRRVVHGYFTPKSMEAWRPFVQAAVKELLDAAEEKGEMDVMRDLATPLPVLVIAQIMGVPPADRRHVRQLAEKLLYIGRGEYDRMKPLTEGMRGMIDYVSPLVEERITNPGDDFISVLAGGERTGVFTQHEVLVNTSLLLLAGHETTINLICNGTLAFLRHPDQWALLKQDPAGLTKSATEECLRYDSPVKSIQRIASQDLEMHGKVLRKDDRIRWFISSANRDPGAFADPGVFDIRRLPNQHVAFGSGVHHCLGATLARVEGQEVFKALAERFPGLQAQTDELEYQPSITFRSLKSLPVTWQ

Samples

Sample ID Description Type Environment
1 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
4 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
5 3300004785 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-1 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
6 3300004798 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
7 3300004800 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
8 3300004801 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
9 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
10 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
11 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
12 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
16 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
21 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
22 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
23 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
24 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
25 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
26 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
27 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
28 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
29 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
30 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
31 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
32 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
33 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
34 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
37 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
38 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
39 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
40 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
41 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
42 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
43 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
44 3300019161 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZA2 metaT (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
45 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
46 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
47 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
48 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
49 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
50 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
51 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
64 3300029285 Sorghum rhizosphere microbial communities from UC West Side Research & Extension Center, Five Points, CA, USA - TP3.B3.stno.R1 Metatranscriptome Rhizosphere
65 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
66 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
67 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
68 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
69 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
70 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
71 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
72 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
73 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
74 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
75 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
76 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
77 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
78 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
79 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
80 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
81 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
82 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
83 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
84 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
85 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
86 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
87 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
88 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
89 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
90 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
91 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
92 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
93 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
94 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
95 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
96 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
97 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
98 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
99 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
100 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
101 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
102 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
103 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
104 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
105 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
106 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
107 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
108 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
109 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
110 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
111 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
112 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
113 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
114 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
115 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
116 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
117 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
118 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
119 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
120 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
121 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
122 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
123 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
124 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
125 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
126 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
127 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
128 3300059490 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 7R_CD_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
129 3300059503 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 21R_SD_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
130 3300059504 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 23R_SD_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
131 3300059507 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 98R_CW_T2_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
132 3300059605 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 71R_SD_T2_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
133 3300059630 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 165R_SD_T3_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
134 3300059644 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 38R_AD_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
135 3300059645 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 18R_SW_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
136 3300059647 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 43R_SW_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
137 3300059655 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 152R_CD_T3_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
138 3300059658 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 178R_AW_T3_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
139 3300060344 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 36R_AW_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
140 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
141 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
142 2870782633 Pseudonocardia eucalypti DSM 45351 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 89.85
Metatranscriptomes 9.77
Isolates 0.38

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.13
Nodule 0
Rhizoplane 0.38
Rhizosphere 91.73
Stem 0
Stem Tuber 0
Unclassified 11.28

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436360_0028713 3300039438 Bacteria 12941
2 JGI25151J46595_10002901 3300003187 Bacteria 9825
3 JGI25407J50210_10000173 3300003373 Bacteria 10479
4 JGI25405J52794_10000251 3300003911 Bacteria 7138
5 JGI25405J52794_10004184 3300003911 Archaea 2565
6 Ga0058858_1411712 3300004785 Unclassified 1563
7 Ga0058859_10004453 3300004798 Bacteria 1733
8 Ga0058859_11804105 3300004798 Bacteria 1657
9 Ga0058859_11814128 3300004798 Bacteria 2113
10 Ga0058861_10046694 3300004800 Unclassified 1831
11 Ga0058860_10028749 3300004801 Bacteria 1884
12 Ga0058860_10047420 3300004801 Bacteria 1776
13 Ga0058860_10052941 3300004801 Bacteria 2345
14 Ga0058862_10093431 3300004803 Unclassified 1548
15 Ga0065707_10171562 3300005295 Bacteria 1481
16 Ga0070658_10040876 3300005327 Bacteria 3741
17 Ga0070709_10069590 3300005434 Bacteria 2267
18 Ga0070714_100108667 3300005435 Bacteria 2453
19 Ga0070713_100016729 3300005436 Bacteria 5521
20 Ga0070713_100082943 3300005436 Bacteria 2739
21 Ga0070711_100047564 3300005439 Bacteria 2929
22 Ga0070708_100064014 3300005445 Bacteria 3293
23 Ga0070708_100109518 3300005445 Bacteria 2537
24 Ga0070706_100015909 3300005467 Bacteria 6945
25 Ga0070706_100031126 3300005467 Bacteria 4920
26 Ga0070706_100061236 3300005467 Bacteria 3475
27 Ga0070706_100067441 3300005467 Bacteria 3310
28 Ga0070707_100005052 3300005468 Bacteria 12369
29 Ga0070707_100017469 3300005468 Bacteria 6744
30 Ga0070707_100041728 3300005468 Bacteria 4393
31 Ga0070707_100080882 3300005468 Bacteria 3137
32 Ga0070698_100039221 3300005471 Unclassified 4876
33 Ga0070698_100070712 3300005471 Bacteria 3501
34 Ga0070698_100338704 3300005471 Unclassified 1436
35 Ga0070697_100024617 3300005536 Bacteria 4794
36 Ga0070697_100033554 3300005536 Bacteria 4134
37 Ga0081455_10000826 3300005937 Bacteria 39835
38 Ga0081455_10001220 3300005937 Bacteria 32191
39 Ga0081455_10003577 3300005937 Bacteria 17837
40 Ga0081455_10004056 3300005937 Bacteria 16598
41 Ga0081455_10017286 3300005937 Bacteria 6923
42 Ga0081455_10026456 3300005937 Bacteria 5334
43 Ga0081538_10000159 3300005981 Bacteria 71002
44 Ga0081538_10001751 3300005981 Bacteria 22032
45 Ga0081538_10003182 3300005981 Bacteria 15587
46 Ga0081538_10003628 3300005981 Bacteria 14508
47 Ga0081538_10008530 3300005981 Bacteria 8684
48 Ga0081538_10011807 3300005981 Bacteria 7050
49 Ga0081538_10019285 3300005981 Bacteria 5078
50 Ga0081538_10022700 3300005981 Bacteria 4538
51 Ga0081538_10057211 3300005981 Unclassified 2275
52 Ga0081538_10099568 3300005981 Bacteria 1468
53 Ga0081540_1007081 3300005983 Bacteria 8059
54 Ga0081540_1034826 3300005983 Bacteria 2708
55 Ga0081539_10003291 3300005985 Bacteria 20223
56 Ga0081539_10038258 3300005985 Bacteria 2845
57 Ga0070717_10105143 3300006028 Bacteria 2402
58 Ga0070712_100012852 3300006175 Bacteria 5332
59 Ga0070712_100037090 3300006175 Bacteria 3320
60 Ga0075428_100005784 3300006844 Bacteria 13728
61 Ga0075428_100008033 3300006844 Bacteria 11708
62 Ga0075428_100012150 3300006844 Bacteria 9578
63 Ga0075428_100079964 3300006844 Bacteria 3567
64 Ga0075428_100097790 3300006844 Bacteria 3200
65 Ga0075428_100244526 3300006844 Bacteria 1935
66 Ga0075428_100426102 3300006844 Bacteria 1422
67 Ga0075430_100007267 3300006846 Bacteria 9352
68 Ga0075430_100018418 3300006846 Bacteria 5941
69 Ga0075430_100054654 3300006846 Bacteria 3359
70 Ga0075430_100071157 3300006846 Bacteria 2918
71 Ga0075430_100092007 3300006846 Bacteria 2536
72 Ga0075430_100231403 3300006846 Bacteria 1532
73 Ga0075431_100007912 3300006847 Bacteria 10593
74 Ga0075431_100062075 3300006847 Bacteria 3856
75 Ga0075431_100142970 3300006847 Bacteria 2466
76 Ga0075431_100193786 3300006847 Bacteria 2081
77 Ga0075434_100047761 3300006871 Bacteria 4247
78 Ga0075434_100322543 3300006871 Bacteria 1565
79 Ga0075429_100017062 3300006880 Bacteria 6278
80 Ga0075429_100050672 3300006880 Bacteria 3612
81 Ga0075429_100054340 3300006880 Bacteria 3483
82 Ga0075429_100068363 3300006880 Bacteria 3091
83 Ga0075429_100068768 3300006880 Unclassified 3082
84 Ga0075429_100178594 3300006880 Unclassified 1860
85 Ga0075429_100232698 3300006880 Bacteria 1614
86 Ga0075435_100005203 3300007076 Bacteria 9049
87 Ga0075435_100104823 3300007076 Bacteria 2346
88 Ga0099794_10027630 3300007265 Bacteria 2632
89 Ga0111539_10014651 3300009094 Bacteria 9783
90 Ga0111539_10068785 3300009094 Unclassified 4181
91 Ga0114129_10025236 3300009147 Bacteria 8420
92 Ga0114129_10056658 3300009147 Bacteria 5488
93 Ga0114129_10141082 3300009147 Unclassified 3303
94 Ga0114129_10142903 3300009147 Bacteria 3279
95 Ga0114129_10192604 3300009147 Unclassified 2767
96 Ga0114129_10204926 3300009147 Bacteria 2669
97 Ga0114129_10286038 3300009147 Bacteria 2201
98 Ga0105248_10010957 3300009177 Bacteria 10003
99 Ga0105238_10365606 3300009551 Bacteria 1432
100 Ga0105249_10122305 3300009553 Unclassified 2475
101 Ga0105249_10159894 3300009553 Bacteria 2176
102 Ga0099796_10026763 3300010159 Bacteria 1835
103 Ga0105239_10111523 3300010375 Bacteria 3032
104 Ga0157374_10211636 3300013296 Bacteria 1901
105 Ga0163162_10202859 3300013306 Bacteria 2112
106 Ga0157379_10031694 3300014968 Unclassified 4710
107 Ga0157379_10129364 3300014968 Bacteria 2272
108 Ga0184602_126867 3300019161 Bacteria 2642
109 Ga0197907_10879271 3300020069 Bacteria 1835
110 Ga0206349_1779944 3300020075 Unclassified 2151
111 Ga0213876_10004274 3300021384 Bacteria 8009
112 Ga0213875_10023499 3300021388 Bacteria 2944
113 Ga0224712_10040938 3300022467 Bacteria 1747
114 Ga0209025_1005785 3300025294 Bacteria 9916
115 Ga0207680_10064374 3300025903 Bacteria 2248
116 Ga0207705_10042349 3300025909 Bacteria 3268
117 Ga0207684_10025993 3300025910 Bacteria 4989
118 Ga0207693_10010368 3300025915 Bacteria 7564
119 Ga0207693_10013388 3300025915 Bacteria 6613
120 Ga0207693_10140854 3300025915 Bacteria 1896
121 Ga0207646_10005302 3300025922 Bacteria 13590
122 Ga0207646_10078284 3300025922 Bacteria 2955
123 Ga0207646_10205392 3300025922 Bacteria 1779
124 Ga0207700_10028512 3300025928 Bacteria 3926
125 Ga0207664_10038504 3300025929 Bacteria 3709
126 Ga0207644_10055513 3300025931 Bacteria 2855
127 Ga0207665_10070367 3300025939 Bacteria 2387
128 Ga0207711_10086086 3300025941 Bacteria 2755
129 Ga0207702_10262815 3300026078 Bacteria 1626
130 Ga0207675_100070023 3300026118 Bacteria 3278
131 Ga0207675_100267337 3300026118 Bacteria 1659
132 Ga0207428_10056088 3300027907 Bacteria 3131
133 Ga0310981_1066611 3300029285 Unclassified 1414
134 Ga0307413_10000148 3300031824 Bacteria 18973
135 Ga0373953_0007018 3300035117 Bacteria 3749
136 Ga0373957_0052767 3300035120 Bacteria 1558
137 Ga0373955_0075871 3300035172 Bacteria 1890
138 Ga0373924_0021321 3300035410 Bacteria 2526
139 Ga0373924_0022062 3300035410 Bacteria 2487
140 Ga0373927_0046960 3300035695 Bacteria 2793
141 Ga0373933_0006606 3300035724 Bacteria 6321
142 Ga0373937_0018915 3300036401 Bacteria 6158
143 Ga0373937_0132993 3300036401 Bacteria 2324
144 Ga0395899_0083617 3300037312 Bacteria 2321
145 Ga0395900_0022256 3300037418 Bacteria 6485
146 Ga0395898_0010508 3300037466 Bacteria 9675
147 Ga0436364_0943057 3300037853 Bacteria 2952
148 Ga0436365_0089777 3300039437 Bacteria 1338
149 Ga0436365_0622264 3300039437 Unclassified 2137
150 Ga0436365_0976766 3300039437 Bacteria 19618
151 Ga0436365_1211425 3300039437 Unclassified 1596
152 Ga0436360_0092179 3300039438 Unclassified 1524
153 Ga0436361_1050463 3300039447 Bacteria 1884
154 Ga0436363_0646067 3300039450 Bacteria 2980
155 Ga0436363_1608790 3300039450 Unclassified 1735
156 Ga0436362_1092928 3300039453 Bacteria 1577
157 Ga0451837_1534406 3300041494 Bacteria 3190
158 Ga0439463_005334 3300042016 Bacteria 3192
159 Ga0439460_0000307 3300042461 Bacteria 10240
160 Ga0439460_0013758 3300042461 Bacteria 2121
161 Ga0453683_0031952 3300044673 Unclassified 3324
162 Ga0466963_0054984 3300044694 Bacteria 2647
163 Ga0466959_0097425 3300045049 Bacteria 2108
164 Ga0495662_0000184 3300046476 Bacteria 25256
165 Ga0495664_0002418 3300046477 Bacteria 10035
166 Ga0495608_0024080 3300046511 Bacteria 4166
167 Ga0495608_0051709 3300046511 Bacteria 2722
168 Ga0495652_0078615 3300046529 Bacteria 2730
169 Ga0495645_0006801 3300046543 Bacteria 7947
170 Ga0495667_0028203 3300046559 Bacteria 3779
171 Ga0495667_0043410 3300046559 Bacteria 2979
172 Ga0495635_0059682 3300046663 Bacteria 2623
173 Ga0495657_0055828 3300046675 Bacteria 2634
174 Ga0495599_0021375 3300046678 Bacteria 4037
175 Ga0495600_0022325 3300046809 Bacteria 4062
176 Ga0495604_0071322 3300047317 Bacteria 2628
177 Ga0495674_0105249 3300047319 Bacteria 2398
178 Ga0495684_0042617 3300047471 Bacteria 3476
179 Ga0495602_0068570 3300048088 Bacteria 3045
180 Ga0496108_0151012 3300048911 Bacteria 2005
181 Ga0501034_0000918 3300049571 Bacteria 43043
182 Ga0501034_0009594 3300049571 Bacteria 10127
183 Ga0501034_0088548 3300049571 Bacteria 3094
184 Ga0501040_0178642 3300049576 Bacteria 1504
185 Ga0501042_0048582 3300049578 Bacteria 3026
186 Ga0501048_0060047 3300049582 Bacteria 2694
187 Ga0501048_0115236 3300049582 Unclassified 1899
188 Ga0501072_0033715 3300049588 Bacteria 4012
189 Ga0501072_0065636 3300049588 Bacteria 2862
190 Ga0501072_0140579 3300049588 Unclassified 1925
191 Ga0501075_0046326 3300049591 Unclassified 3267
192 Ga0501076_0046895 3300049592 Bacteria 3415
193 Ga0501076_0073279 3300049592 Bacteria 2742
194 Ga0501076_0217142 3300049592 Bacteria 1563
195 Ga0501077_0016109 3300049593 Bacteria 4710
196 Ga0501079_0096881 3300049741 Bacteria 2287
197 Ga0501080_0090122 3300049742 Bacteria 2849
198 Ga0501080_0312750 3300049742 Bacteria 1423
199 Ga0501081_0044662 3300049743 Unclassified 3042
200 Ga0501083_0194174 3300049744 Unclassified 1325
201 nmdc:mga05p37_11079_c1 3300050507 Bacteria 10714
202 nmdc:mga05p37_121392_c1 3300050507 Bacteria 3210
203 nmdc:mga05p37_134968_c1 3300050507 Bacteria 3027
204 nmdc:mga05p37_144097_c1 3300050507 Unclassified 2918
205 nmdc:mga05p37_177128_c1 3300050507 Bacteria 2597
206 nmdc:mga05p37_24207_c1 3300050507 Bacteria 7378
207 nmdc:mga05p37_407625_c1 3300050507 Bacteria 1585
208 nmdc:mga05p37_4357_c1 3300050507 Bacteria 16519
209 nmdc:mga05p37_97363_c1 3300050507 Bacteria 3624
210 nmdc:mga09592_15840_c1 3300050508 Bacteria 6161
211 nmdc:mga09592_29968_c1 3300050508 Bacteria 4527
212 nmdc:mga09592_59204_c1 3300050508 Bacteria 3238
213 nmdc:mga09592_74068_c1 3300050508 Bacteria 2894
214 nmdc:mga09592_84250_c1 3300050508 Bacteria 2710
215 nmdc:mga0qj67_1593_c2 3300050509 Bacteria 13443
216 nmdc:mga0qj67_211507_c1 3300050509 Bacteria 1575
217 nmdc:mga0qj67_215458_c1 3300050509 Bacteria 1559
218 nmdc:mga0qj67_54679_c1 3300050509 Bacteria 3161
219 nmdc:mga0qj67_63046_c1 3300050509 Bacteria 2947
220 nmdc:mga0qj67_70915_c1 3300050509 Bacteria 2780
221 nmdc:mga0qj67_83937_c1 3300050509 Bacteria 2554
222 nmdc:mga06r32_11259_c1 3300050510 Bacteria 8057
223 nmdc:mga06r32_191566_c1 3300050510 Bacteria 2032
224 nmdc:mga06r32_288829_c1 3300050510 Unclassified 1627
225 nmdc:mga06r32_34474_c1 3300050510 Bacteria 4773
226 nmdc:mga06r32_80878_c1 3300050510 Bacteria 3163
227 nmdc:mga08y16_124079_c1 3300050511 Bacteria 2687
228 nmdc:mga08y16_306448_c1 3300050511 Bacteria 1636
229 nmdc:mga08y16_35837_c1 3300050511 Bacteria 5211
230 nmdc:mga08y16_92547_c1 3300050511 Bacteria 3150
231 nmdc:mga0n895_46873_c1 3300050512 Bacteria 4224
232 nmdc:mga0rr50_163504_c1 3300050513 Unclassified 1808
233 nmdc:mga0rr50_39040_c1 3300050513 Bacteria 3441
234 nmdc:mga0a205_104638_c1 3300050515 Bacteria 2729
235 nmdc:mga0a205_174607_c1 3300050515 Bacteria 2044
236 Ga0495601_0000358 3300053077 Bacteria 23987
237 Ga0495601_0106346 3300053077 Bacteria 1815
238 Ga0495612_0005007 3300053078 Bacteria 5488
239 Ga0495595_0029533 3300053084 Bacteria 2454
240 Ga0495619_0006891 3300053085 Bacteria 7185
241 Ga0495619_0125881 3300053085 Bacteria 1758
242 Ga0500616_0006270 3300053153 Bacteria 7832
243 Ga0501084_0001830 3300054114 Bacteria 16956
244 Ga0501084_0196785 3300054114 Bacteria 1701
245 Ga0587066_007217 3300059490 Bacteria 1499
246 Ga0587080_006020 3300059503 Bacteria 1654
247 Ga0587082_010248 3300059504 Bacteria 1348
248 Ga0587086_003766 3300059507 Bacteria 1546
249 Ga0587106_004295 3300059605 Bacteria 1558
250 Ga0587128_001275 3300059630 Bacteria 2322
251 Ga0587075_001958 3300059644 Unclassified 2102
252 Ga0587076_005349 3300059645 Bacteria 1656
253 Ga0587079_001018 3300059647 Bacteria 2930
254 Ga0587114_001289 3300059655 Bacteria 2059
255 Ga0587119_003494 3300059658 Bacteria 1497
256 Ga0587071_004375 3300060344 Bacteria 2102
257 Ga0501082_0183336 3300060353 Unclassified 1821
258 Ga0530510_0043894 3300061734 Bacteria 3230
259 Ga0530510_0083156 3300061734 Bacteria 2331
260 Ga0530510_0097226 3300061734 Bacteria 2152
261 2870783292 2870782633 Bacteria 9624083
262 Ga0436360_0028713
263 JGI25151J46595_10002901
264 JGI25407J50210_10000173
265 JGI25405J52794_10000251
266 JGI25405J52794_10004184
267 Ga0058858_1411712
268 Ga0058859_10004453
269 Ga0058859_11804105
270 Ga0058859_11814128
271 Ga0058861_10046694
272 Ga0058860_10028749
273 Ga0058860_10047420
274 Ga0058860_10052941
275 Ga0058862_10093431
276 Ga0065707_10171562
277 Ga0070658_10040876
278 Ga0070709_10069590
279 Ga0070714_100108667
280 Ga0070713_100016729
281 Ga0070713_100082943
282 Ga0070711_100047564
283 Ga0070708_100064014
284 Ga0070708_100109518
285 Ga0070706_100015909
286 Ga0070706_100031126
287 Ga0070706_100061236
288 Ga0070706_100067441
289 Ga0070707_100005052
290 Ga0070707_100017469
291 Ga0070707_100041728
292 Ga0070707_100080882
293 Ga0070698_100039221
294 Ga0070698_100070712
295 Ga0070698_100338704
296 Ga0070697_100024617
297 Ga0070697_100033554
298 Ga0081455_10000826
299 Ga0081455_10001220
300 Ga0081455_10003577
301 Ga0081455_10004056
302 Ga0081455_10017286
303 Ga0081455_10026456
304 Ga0081538_10000159
305 Ga0081538_10001751
306 Ga0081538_10003182
307 Ga0081538_10003628
308 Ga0081538_10008530
309 Ga0081538_10011807
310 Ga0081538_10019285
311 Ga0081538_10022700
312 Ga0081538_10057211
313 Ga0081538_10099568
314 Ga0081540_1007081
315 Ga0081540_1034826
316 Ga0081539_10003291
317 Ga0081539_10038258
318 Ga0070717_10105143
319 Ga0070712_100012852
320 Ga0070712_100037090
321 Ga0075428_100005784
322 Ga0075428_100008033
323 Ga0075428_100012150
324 Ga0075428_100079964
325 Ga0075428_100097790
326 Ga0075428_100244526
327 Ga0075428_100426102
328 Ga0075430_100007267
329 Ga0075430_100018418
330 Ga0075430_100054654
331 Ga0075430_100071157
332 Ga0075430_100092007
333 Ga0075430_100231403
334 Ga0075431_100007912
335 Ga0075431_100062075
336 Ga0075431_100142970
337 Ga0075431_100193786
338 Ga0075434_100047761
339 Ga0075434_100322543
340 Ga0075429_100017062
341 Ga0075429_100050672
342 Ga0075429_100054340
343 Ga0075429_100068363
344 Ga0075429_100068768
345 Ga0075429_100178594
346 Ga0075429_100232698
347 Ga0075435_100005203
348 Ga0075435_100104823
349 Ga0099794_10027630
350 Ga0111539_10014651
351 Ga0111539_10068785
352 Ga0114129_10025236
353 Ga0114129_10056658
354 Ga0114129_10141082
355 Ga0114129_10142903
356 Ga0114129_10192604
357 Ga0114129_10204926
358 Ga0114129_10286038
359 Ga0105248_10010957
360 Ga0105238_10365606
361 Ga0105249_10122305
362 Ga0105249_10159894
363 Ga0099796_10026763
364 Ga0105239_10111523
365 Ga0157374_10211636
366 Ga0163162_10202859
367 Ga0157379_10031694
368 Ga0157379_10129364
369 Ga0184602_126867
370 Ga0197907_10879271
371 Ga0206349_1779944
372 Ga0213876_10004274
373 Ga0213875_10023499
374 Ga0224712_10040938
375 Ga0209025_1005785
376 Ga0207680_10064374
377 Ga0207705_10042349
378 Ga0207684_10025993
379 Ga0207693_10010368
380 Ga0207693_10013388
381 Ga0207693_10140854
382 Ga0207646_10005302
383 Ga0207646_10078284
384 Ga0207646_10205392
385 Ga0207700_10028512
386 Ga0207664_10038504
387 Ga0207644_10055513
388 Ga0207665_10070367
389 Ga0207711_10086086
390 Ga0207702_10262815
391 Ga0207675_100070023
392 Ga0207675_100267337
393 Ga0207428_10056088
394 Ga0310981_1066611
395 Ga0307413_10000148
396 Ga0373953_0007018
397 Ga0373957_0052767
398 Ga0373955_0075871
399 Ga0373924_0021321
400 Ga0373924_0022062
401 Ga0373927_0046960
402 Ga0373933_0006606
403 Ga0373937_0018915
404 Ga0373937_0132993
405 Ga0395899_0083617
406 Ga0395900_0022256
407 Ga0395898_0010508
408 Ga0436364_0943057
409 Ga0436365_0089777
410 Ga0436365_0622264
411 Ga0436365_0976766
412 Ga0436365_1211425
413 Ga0436360_0092179
414 Ga0436361_1050463
415 Ga0436363_0646067
416 Ga0436363_1608790
417 Ga0436362_1092928
418 Ga0451837_1534406
419 Ga0439463_005334
420 Ga0439460_0000307
421 Ga0439460_0013758
422 Ga0453683_0031952
423 Ga0466963_0054984
424 Ga0466959_0097425
425 Ga0495662_0000184
426 Ga0495664_0002418
427 Ga0495608_0024080
428 Ga0495608_0051709
429 Ga0495652_0078615
430 Ga0495645_0006801
431 Ga0495667_0028203
432 Ga0495667_0043410
433 Ga0495635_0059682
434 Ga0495657_0055828
435 Ga0495599_0021375
436 Ga0495600_0022325
437 Ga0495604_0071322
438 Ga0495674_0105249
439 Ga0495684_0042617
440 Ga0495602_0068570
441 Ga0496108_0151012
442 Ga0501034_0000918
443 Ga0501034_0009594
444 Ga0501034_0088548
445 Ga0501040_0178642
446 Ga0501042_0048582
447 Ga0501048_0060047
448 Ga0501048_0115236
449 Ga0501072_0033715
450 Ga0501072_0065636
451 Ga0501072_0140579
452 Ga0501075_0046326
453 Ga0501076_0046895
454 Ga0501076_0073279
455 Ga0501076_0217142
456 Ga0501077_0016109
457 Ga0501079_0096881
458 Ga0501080_0090122
459 Ga0501080_0312750
460 Ga0501081_0044662
461 Ga0501083_0194174
462 nmdc:mga05p37_11079_c1
463 nmdc:mga05p37_121392_c1
464 nmdc:mga05p37_134968_c1
465 nmdc:mga05p37_144097_c1
466 nmdc:mga05p37_177128_c1
467 nmdc:mga05p37_24207_c1
468 nmdc:mga05p37_407625_c1
469 nmdc:mga05p37_4357_c1
470 nmdc:mga05p37_97363_c1
471 nmdc:mga09592_15840_c1
472 nmdc:mga09592_29968_c1
473 nmdc:mga09592_59204_c1
474 nmdc:mga09592_74068_c1
475 nmdc:mga09592_84250_c1
476 nmdc:mga0qj67_1593_c2
477 nmdc:mga0qj67_211507_c1
478 nmdc:mga0qj67_215458_c1
479 nmdc:mga0qj67_54679_c1
480 nmdc:mga0qj67_63046_c1
481 nmdc:mga0qj67_70915_c1
482 nmdc:mga0qj67_83937_c1
483 nmdc:mga06r32_11259_c1
484 nmdc:mga06r32_191566_c1
485 nmdc:mga06r32_288829_c1
486 nmdc:mga06r32_34474_c1
487 nmdc:mga06r32_80878_c1
488 nmdc:mga08y16_124079_c1
489 nmdc:mga08y16_306448_c1
490 nmdc:mga08y16_35837_c1
491 nmdc:mga08y16_92547_c1
492 nmdc:mga0n895_46873_c1
493 nmdc:mga0rr50_163504_c1
494 nmdc:mga0rr50_39040_c1
495 nmdc:mga0a205_104638_c1
496 nmdc:mga0a205_174607_c1
497 Ga0495601_0000358
498 Ga0495601_0106346
499 Ga0495612_0005007
500 Ga0495595_0029533
501 Ga0495619_0006891
502 Ga0495619_0125881
503 Ga0500616_0006270
504 Ga0501084_0001830
505 Ga0501084_0196785
506 Ga0587066_007217
507 Ga0587080_006020
508 Ga0587082_010248
509 Ga0587086_003766
510 Ga0587106_004295
511 Ga0587128_001275
512 Ga0587075_001958
513 Ga0587076_005349
514 Ga0587079_001018
515 Ga0587114_001289
516 Ga0587119_003494
517 Ga0587071_004375
518 Ga0501082_0183336
519 Ga0530510_0043894
520 Ga0530510_0083156
521 Ga0530510_0097226
522 2870783292

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00067

p450

Cytochrome P450

255

464

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
4yzr-assembly1.cif.gz_A bacillus subtilis 168 bacillaene polyketide synthase (pks) cytochrome p450 pkss 0.9456 10 409
4yzr-assembly1.cif.gz_A bacillus subtilis 168 bacillaene polyketide synthase (pks) cytochrome p450 pkss 0.9268 10 409
5l92-assembly2.cif.gz_B the 2.1 a crystal structure of cyp109e1 from bacillus megaterium in complex with corticosterone 0.925 13 409
7y98-assembly2.cif.gz_B crystal structure of cyp109b4 from bacillus sonorensis in complex with testosterone 0.9248 16 409
5l94-assembly2.cif.gz_B the 2.25 a crystal structure of cyp109e1 from bacillus megaterium in complex with testosterone 0.9238 17 409
ID Description Score Start End Superfamily
4yzrA00 Mainly Alpha;Orthogonal Bundle;Cytochrome p450;Cytochrome P450 0.9456 10 409 1.10.630.10
4yzrA00 Mainly Alpha;Orthogonal Bundle;Cytochrome p450;Cytochrome P450 0.9268 10 409 1.10.630.10
5l92B00 Mainly Alpha;Orthogonal Bundle;Cytochrome p450;Cytochrome P450 0.925 13 409 1.10.630.10
5vwsA00 Mainly Alpha;Orthogonal Bundle;Cytochrome p450;Cytochrome P450 0.9212 18 409 1.10.630.10
5ofqD00 Mainly Alpha;Orthogonal Bundle;Cytochrome p450;Cytochrome P450 0.9164 4 410 1.10.630.10
ID Description Score Start End GO Terms
AF-C2T9N6-F1-model_v4 deleted 0.971 122 410
AF-C2T9N6-F1-model_v4 deleted 0.9645 122 410
AF-A0A534PBB6-F1-model_v4 Cytochrome P450 0.9538 236 410 GO:0004497
GO:0005506
GO:0016705
GO:0020037
AF-A0A7C7S9P0-F1-model_v4 deleted 0.9484 94 410
AF-A0A3B8IU21-F1-model_v4 Cytochrome P450 0.9475 97 409 GO:0005506
GO:0006707
GO:0008395
GO:0020037
GO:0036199

Map