F373930

General Info

Members Datasets Scaffolds Average Seq Length
266 184 532 305

Family's Representative Sequence

Representative Sequence 3300005518|Ga0070699_100150071|Ga0070699_1001500712
Length 331
Sequence MLALGAKLTYPLGAGNPKFGGSDLSDIKLFRLVSSKATEMQGLASDLEKPLQTLIEKNLEELLGIRFLKSEYSTGKTHAGRIDTLGLDENNCPVIFEYKRSSSENVINQGLFYLDWLMDHKAEFELLVINNLDKTSAKAIDWSAPRVVCIANDFTKYDEHAVQQIGRNIELFRYKQFGTEFLLLELVNSVSQKTIPKSKPPSKGKGIAKPTTLYGAAALVTARREVRDLFASLEGYIMSLGDDVQRKDLKLYIAFKRIRNFTTVEVYKEKLLLHVHLNPDSVDLVEGFTRDVRKKGHWGTGDLEVWVRNNIDLERAKPLIKQAHDGGLSRG

Samples

Sample ID Description Type Environment
1 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
2 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
3 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
4 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
5 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
8 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
9 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
10 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
11 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
12 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
13 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
14 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
15 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
21 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
28 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
29 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
30 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
31 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
32 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
33 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
34 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
37 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
38 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
39 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
40 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
41 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
42 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
43 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
44 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
45 3300015687 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 002.1_G08 Metagenome Rhizosphere
46 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
47 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
51 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
52 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
74 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
75 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
76 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
77 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
78 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
79 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
80 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
81 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
82 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
83 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
84 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
85 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
86 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
87 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
88 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
89 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
90 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
91 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
92 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
93 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
94 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
95 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
96 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
97 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
98 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
99 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
100 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
101 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
102 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
103 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
104 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
105 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
106 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
107 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
108 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
109 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
110 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
111 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
112 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
113 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
114 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
115 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
116 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
117 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
118 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
119 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
120 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
121 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
122 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
123 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
124 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
125 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
126 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
127 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
128 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
129 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
130 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
131 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
132 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
133 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
134 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
135 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
136 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
137 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
138 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
147 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
148 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
149 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
150 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
151 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
152 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
153 3300049778 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_A_5_control Metagenome Rhizosphere
154 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
156 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
157 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
158 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
159 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
160 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
161 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
162 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
163 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
164 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
165 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
166 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
167 3300053736 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 endosphere Metagenome Endosphere
168 3300053737 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 endosphere Metagenome Endosphere
169 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
170 3300059641 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 9R_AW_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
171 2534681786 Brucella suis 92/29 Isolate Unclassified
172 2643221616 Leifsonia sp. Root227 Isolate Unclassified
173 2795385472 Herbihabitans rhizosphaerae DSM 101727 Isolate Rhizosphere
174 2842757796 Stenotrophomonas sp. R-72406 Isolate Unclassified
175 2891048133 Martelella lutilitoris GH2-6 Isolate Rhizosphere
176 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
177 2904456579 Variovorax sp. 2002 Isolate Unclassified
178 2919119836 Phyllobacterium sp. 1468 Isolate Rhizosphere
179 2932410948 Janthinobacterium lividum 2829 Isolate Rhizosphere
180 2932416698 Janthinobacterium lividum 2830 Isolate Rhizosphere
181 2979083700 Bacillus toyonensis SORGH_AS 407 Isolate Unclassified
182 2998344455 Vogesella urethralis SLBN-145 Isolate Rhizosphere
183 644736347 Cupriavidus taiwanensis LMG 19424 Isolate Nodule
184 8016583857 Bradyrhizobium sp. LM2.7 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 94.36
Metatranscriptomes 0.38
Isolates 5.26

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.29
Nodule 1.13
Rhizoplane 1.13
Rhizosphere 71.43
Stem 0
Stem Tuber 0
Unclassified 4.14

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070699_100150071 3300005518 Bacteria 2061
2 JGI24735J21928_10005100 3300002067 Bacteria 4373
3 JGI25150J39212_1000134 3300002774 Bacteria 41589
4 JGI25151J46595_10005194 3300003187 Bacteria 6753
5 JGI25151J46595_10047695 3300003187 Bacteria 1487
6 JGI25153J46596_10013832 3300003215 Bacteria 3388
7 rootH2_10132224 3300003320 Bacteria 1493
8 rootH2_10202555 3300003320 Bacteria 1387
9 rootH1_10060801 3300003323 Bacteria 3091
10 rootH1_10319024 3300003323 Bacteria 1152
11 Ga0055542_1000012 3300003762 Bacteria 391808
12 Ga0055529_1000002 3300003763 Bacteria 537914
13 Ga0055529_1000021 3300003763 Bacteria 321484
14 Ga0055531_10000670 3300003794 Bacteria 29314
15 Ga0065165_1038348 3300005262 Bacteria 1445
16 Ga0065704_10130816 3300005289 Bacteria 1631
17 Ga0065704_10145037 3300005289 Bacteria 1480
18 Ga0065715_10196413 3300005293 Unclassified 1385
19 Ga0070680_100000298 3300005336 Bacteria 33103
20 Ga0070680_100445903 3300005336 Bacteria 1105
21 Ga0070668_100000458 3300005347 Bacteria 26949
22 Ga0070668_100006019 3300005347 Bacteria 8997
23 Ga0070668_100019248 3300005347 Bacteria 5138
24 Ga0070659_100001096 3300005366 Bacteria 19738
25 Ga0070667_100018546 3300005367 Bacteria 5772
26 Ga0070708_100036202 3300005445 Bacteria 4305
27 Ga0070708_100051092 3300005445 Bacteria 3662
28 Ga0070708_100104604 3300005445 Unclassified 2596
29 Ga0070681_10161700 3300005458 Bacteria 2163
30 Ga0070706_100001702 3300005467 Bacteria 22890
31 Ga0070706_100150246 3300005467 Unclassified 2174
32 Ga0070706_100352102 3300005467 Unclassified 1372
33 Ga0070707_100026396 3300005468 Bacteria 5514
34 Ga0070698_100137476 3300005471 Unclassified 2397
35 Ga0070672_100006511 3300005543 Bacteria 7850
36 Ga0070665_100095210 3300005548 Bacteria 2982
37 Ga0070665_100608081 3300005548 Bacteria 1106
38 Ga0070664_100003845 3300005564 Bacteria 12114
39 Ga0068856_100240863 3300005614 Bacteria 1824
40 Ga0068861_100006049 3300005719 Bacteria 8228
41 Ga0068860_100217353 3300005843 Bacteria 1855
42 Ga0068862_100000143 3300005844 Bacteria 80650
43 Ga0068862_100033718 3300005844 Bacteria 4330
44 Ga0075364_10117138 3300006051 Unclassified 1781
45 Ga0075362_10045012 3300006177 Bacteria 1959
46 Ga0075369_10036671 3300006186 Bacteria 2087
47 Ga0075429_100301422 3300006880 Unclassified 1403
48 Ga0079104_1001979 3300006946 Bacteria 12031
49 Ga0105240_10003989 3300009093 Bacteria 22748
50 Ga0105238_10049830 3300009551 Bacteria 4217
51 Ga0105249_10000650 3300009553 Bacteria 31685
52 Ga0105249_10080848 3300009553 Bacteria 3020
53 Ga0105239_10002645 3300010375 Bacteria 22617
54 Ga0157370_10002053 3300013104 Bacteria 24708
55 Ga0157370_10013224 3300013104 Bacteria 8508
56 Ga0157370_10340126 3300013104 Unclassified 1383
57 Ga0163162_10606096 3300013306 Bacteria 1221
58 Ga0157372_10201728 3300013307 Bacteria 2304
59 Ga0157380_10003131 3300014326 Bacteria 11282
60 Ga0182008_10040625 3300014497 Bacteria 2322
61 Ga0182007_10006845 3300015262 Bacteria 4848
62 Ga0183368_1002 3300015687 Bacteria 1865598
63 Ga0207425_1000251 3300025245 Bacteria 40384
64 Ga0207425_1008743 3300025245 Bacteria 2565
65 Ga0209677_100859 3300025253 Bacteria 15021
66 Ga0209148_1000008 3300025254 Bacteria 1504371
67 Ga0209455_1000002 3300025272 Bacteria 1505459
68 Ga0209025_1001203 3300025294 Bacteria 36334
69 Ga0209025_1003206 3300025294 Bacteria 15856
70 Ga0209758_1010080 3300025297 Bacteria 5724
71 Ga0209050_1002397 3300025298 Bacteria 16243
72 Ga0209257_1000117 3300025304 Bacteria 227328
73 Ga0209257_1007044 3300025304 Bacteria 6956
74 Ga0207647_10108756 3300025904 Bacteria 1640
75 Ga0207684_10000159 3300025910 Bacteria 115668
76 Ga0207684_10122758 3300025910 Unclassified 2227
77 Ga0207684_10189381 3300025910 Unclassified 1774
78 Ga0207707_10161237 3300025912 Bacteria 1960
79 Ga0207695_10002882 3300025913 Bacteria 24939
80 Ga0207660_10000099 3300025917 Bacteria 48138
81 Ga0207646_10017866 3300025922 Bacteria 6624
82 Ga0207694_10029268 3300025924 Bacteria 4202
83 Ga0207690_10002608 3300025932 Bacteria 10869
84 Ga0207691_10007031 3300025940 Bacteria 10856
85 Ga0207679_10000680 3300025945 Bacteria 22752
86 Ga0207667_10162233 3300025949 Bacteria 2299
87 Ga0207712_10002873 3300025961 Bacteria 11009
88 Ga0207668_10000453 3300025972 Bacteria 25788
89 Ga0207668_10001377 3300025972 Bacteria 14328
90 Ga0207668_10019566 3300025972 Bacteria 4283
91 Ga0207658_10029884 3300025986 Bacteria 3853
92 Ga0207675_100002558 3300026118 Bacteria 18014
93 Ga0207698_10518372 3300026142 Eukaryota 1163
94 Ga0268266_10035947 3300028379 Bacteria 4213
95 Ga0268265_10000031 3300028380 Bacteria 226725
96 Ga0268265_10052934 3300028380 Bacteria 3073
97 Ga0268264_10195937 3300028381 Bacteria 1845
98 Ga0265318_10006658 3300028577 Bacteria 5300
99 Ga0307515_10001105 3300028794 Bacteria 61711
100 Ga0265338_10083958 3300028800 Bacteria 2661
101 Ga0265324_10010758 3300029957 Bacteria 3511
102 Ga0265325_10015286 3300031241 Bacteria 4319
103 Ga0265316_10045112 3300031344 Bacteria 3502
104 Ga0265316_10112678 3300031344 Bacteria 2059
105 Ga0307509_10000031 3300031507 Bacteria 205072
106 Ga0307509_10012724 3300031507 Bacteria 10027
107 Ga0307509_10035040 3300031507 Bacteria 5512
108 Ga0307408_100002618 3300031548 Bacteria 12530
109 Ga0307408_100003419 3300031548 Bacteria 10883
110 Ga0307408_100138053 3300031548 Bacteria 1910
111 Ga0307508_10032734 3300031616 Bacteria 4695
112 Ga0307514_10016020 3300031649 Bacteria 6174
113 Ga0307405_10043743 3300031731 Bacteria 2734
114 Ga0307410_10003026 3300031852 Bacteria 8304
115 Ga0307406_10209454 3300031901 Bacteria 1441
116 Ga0307407_10034495 3300031903 Bacteria 2771
117 Ga0307412_10018288 3300031911 Bacteria 4214
118 Ga0307412_10048887 3300031911 Bacteria 2784
119 Ga0307412_10059821 3300031911 Bacteria 2555
120 Ga0307416_100161108 3300032002 Bacteria 2074
121 Ga0307414_10000413 3300032004 Bacteria 23029
122 Ga0307414_10006197 3300032004 Bacteria 6649
123 Ga0307414_10035621 3300032004 Bacteria 3314
124 Ga0307411_10010425 3300032005 Bacteria 4954
125 Ga0307415_100102576 3300032126 Bacteria 2102
126 Ga0307507_10051281 3300033179 Bacteria 3973
127 Ga0307507_10105280 3300033179 Bacteria 2336
128 Ga0395899_0026215 3300037312 Bacteria 4399
129 Ga0395899_0124143 3300037312 Bacteria 1847
130 Ga0395900_0000321 3300037418 Bacteria 71088
131 Ga0395900_0002200 3300037418 Bacteria 21783
132 Ga0395900_0011940 3300037418 Bacteria 8883
133 Ga0395900_0028319 3300037418 Bacteria 5737
134 Ga0395900_0060006 3300037418 Bacteria 3915
135 Ga0395898_0009110 3300037466 Bacteria 10454
136 Ga0395898_0140415 3300037466 Bacteria 2313
137 Ga0395898_0200162 3300037466 Bacteria 1907
138 Ga0395905_0001061 3300037471 Bacteria 34684
139 Ga0395905_0005539 3300037471 Bacteria 12884
140 Ga0395905_0085409 3300037471 Bacteria 2957
141 Ga0395905_0119863 3300037471 Bacteria 2473
142 Ga0395905_0247601 3300037471 Bacteria 1665
143 Ga0436364_0031191 3300037853 Bacteria 2915
144 Ga0395901_0015438 3300038443 Bacteria 7778
145 Ga0395901_0041584 3300038443 Bacteria 4765
146 Ga0395901_0073875 3300038443 Bacteria 3557
147 Ga0395901_0105333 3300038443 Bacteria 2960
148 Ga0395901_0154677 3300038443 Bacteria 2409
149 Ga0395901_0158872 3300038443 Bacteria 2374
150 Ga0395901_0203671 3300038443 Bacteria 2074
151 Ga0395901_0206280 3300038443 Bacteria 2059
152 Ga0237819_05493 3300038705 Bacteria 1984
153 Ga0453683_0084644 3300044673 Bacteria 1987
154 Ga0453684_0022380 3300044712 Bacteria 9380
155 Ga0453684_0033991 3300044712 Bacteria 7091
156 Ga0453684_0127339 3300044712 Bacteria 3062
157 Ga0453684_0419567 3300044712 Bacteria 1495
158 Ga0466959_0003238 3300045049 Bacteria 10591
159 Ga0495627_003800 3300046453 Bacteria 6501
160 Ga0495590_0000576 3300046457 Bacteria 17396
161 Ga0495605_0009170 3300046474 Bacteria 5565
162 Ga0495584_0014006 3300046491 Bacteria 4085
163 Ga0495585_0166594 3300046492 Bacteria 1141
164 Ga0495583_0003714 3300046506 Bacteria 11350
165 Ga0495606_0001029 3300046507 Bacteria 40481
166 Ga0495606_0129579 3300046507 Bacteria 1501
167 Ga0495610_0003449 3300046512 Bacteria 12311
168 Ga0495616_0001265 3300046513 Bacteria 17769
169 Ga0495616_0008587 3300046513 Bacteria 6034
170 Ga0495620_0005910 3300046515 Bacteria 6787
171 Ga0495643_0008531 3300046522 Bacteria 6476
172 Ga0495643_0019267 3300046522 Bacteria 3951
173 Ga0495648_0001286 3300046524 Bacteria 25027
174 Ga0495587_0017872 3300046536 Bacteria 4399
175 Ga0495609_0001622 3300046538 Bacteria 14678
176 Ga0495609_0036976 3300046538 Bacteria 2203
177 Ga0495625_0000721 3300046660 Bacteria 46512
178 Ga0495625_0015126 3300046660 Bacteria 6124
179 Ga0495625_0041607 3300046660 Bacteria 3344
180 Ga0495661_0002130 3300046665 Bacteria 15516
181 Ga0495661_0005676 3300046665 Bacteria 8836
182 Ga0495661_0068326 3300046665 Bacteria 2084
183 Ga0495671_0000991 3300046692 Bacteria 19796
184 Ga0495649_0057226 3300046694 Bacteria 2103
185 Ga0495660_0003180 3300046810 Bacteria 10222
186 Ga0495660_0169075 3300046810 Bacteria 1066
187 Ga0495672_0000013 3300047320 Bacteria 511827
188 Ga0495672_0007226 3300047320 Bacteria 8382
189 Ga0495676_0032093 3300047321 Bacteria 4437
190 Ga0495683_0002374 3300047323 Bacteria 11414
191 Ga0495683_0065212 3300047323 Bacteria 1797
192 Ga0495686_0008406 3300047472 Bacteria 7573
193 Ga0495686_0070600 3300047472 Bacteria 2152
194 Ga0495626_0000054 3300048091 Bacteria 154997
195 Ga0495626_0002108 3300048091 Bacteria 14456
196 Ga0495626_0003818 3300048091 Bacteria 9458
197 Ga0495626_0015120 3300048091 Bacteria 3956
198 Ga0496104_0321906 3300048907 Bacteria 1459
199 Ga0496105_0037968 3300048908 Bacteria 3967
200 Ga0496105_0247780 3300048908 Bacteria 1444
201 Ga0496116_0006652 3300048919 Bacteria 10434
202 Ga0496116_0017244 3300048919 Bacteria 5614
203 Ga0496116_0055239 3300048919 Bacteria 2610
204 Ga0496119_0007740 3300048922 Bacteria 9595
205 Ga0496120_0005840 3300048923 Bacteria 9628
206 Ga0496120_0016991 3300048923 Bacteria 4733
207 Ga0496121_0011184 3300048924 Bacteria 10004
208 Ga0496123_0032634 3300048926 Bacteria 3764
209 Ga0496124_0000504 3300048927 Bacteria 67117
210 Ga0496125_0008999 3300048928 Bacteria 10348
211 Ga0496125_0012610 3300048928 Bacteria 8373
212 Ga0496125_0047145 3300048928 Bacteria 3607
213 Ga0495682_0027043 3300049460 Bacteria 2129
214 Ga0501300_000717 3300049523 Bacteria 4972
215 Ga0501032_0157253 3300049569 Bacteria 1493
216 Ga0501033_0014792 3300049570 Bacteria 5924
217 Ga0501036_0080210 3300049572 Bacteria 2759
218 Ga0501037_0255021 3300049573 Bacteria 1227
219 Ga0501039_0557036 3300049575 Bacteria 899
220 Ga0501042_0000109 3300049578 Bacteria 34212
221 Ga0501043_0014074 3300049579 Bacteria 6261
222 Ga0501047_0099353 3300049581 Bacteria 2789
223 Ga0501047_0117309 3300049581 Bacteria 2543
224 Ga0501067_0003744 3300049583 Bacteria 8374
225 Ga0501070_0004711 3300049586 Bacteria 11690
226 Ga0501074_0093060 3300049590 Bacteria 2158
227 Ga0501225_0000684 3300049705 Bacteria 10600
228 Ga0501080_0442584 3300049742 Bacteria 1166
229 Ga0501083_0124146 3300049744 Bacteria 1693
230 Ga0501280_001044 3300049776 Bacteria 5667
231 Ga0501282_000215 3300049778 Bacteria 7153
232 Ga0501035_0037211 3300049822 Bacteria 4408
233 Ga0501035_0086392 3300049822 Bacteria 2764
234 Ga0501035_0421694 3300049822 Bacteria 1108
235 Ga0501044_0173809 3300049823 Unclassified 2124
236 nmdc:mga03683_9909_c1 3300050489 Bacteria 1751
237 nmdc:mga07m45_17866_c1 3300050496 Bacteria 3816
238 nmdc:mga0sz30_16004_c1 3300050516 Bacteria 2087
239 Ga0500642_0000091 3300053130 Bacteria 45704
240 Ga0500642_0063646 3300053130 Bacteria 1663
241 Ga0500652_000277 3300053131 Bacteria 19061
242 Ga0500568_0004786 3300053139 Bacteria 7157
243 Ga0500568_0005501 3300053139 Bacteria 6532
244 Ga0500573_0000016 3300053140 Bacteria 182675
245 Ga0500604_0000758 3300053151 Bacteria 8858
246 Ga0500634_0000603 3300053161 Bacteria 12008
247 Ga0500636_0007581 3300053177 Bacteria 6276
248 Ga0500637_0108915 3300053178 Bacteria 1606
249 Ga0500599_003640 3300053736 Bacteria 1888
250 Ga0500601_007734 3300053737 Bacteria 1192
251 Ga0501084_0086268 3300054114 Bacteria 2636
252 Ga0587068_005691 3300059641 Bacteria 1714
253 2535486792 2534681786 Bacteria 3308809
254 2644096676 2643221616 Bacteria 4066575
255 2795792419 2795385472 Bacteria 6627535
256 2842758330 2842757796 Bacteria 3981385
257 2891048469 2891048133 Bacteria 4447501
258 2899363837 2899359706 Bacteria 10940472
259 2904463033 2904456579 Bacteria 6819253
260 2919120920 2919119836 Bacteria 5208557
261 2932412995 2932410948 Bacteria 6312192
262 2932420510 2932416698 Bacteria 6315112
263 2979089540 2979083700 Bacteria 5894929
264 2998344948 2998344455 Bacteria 4222996
265 644747151 644736347 Bacteria 6476522
266 8016586050 8016583857 Bacteria 10421953
267 Ga0070699_100150071
268 JGI24735J21928_10005100
269 JGI25150J39212_1000134
270 JGI25151J46595_10005194
271 JGI25151J46595_10047695
272 JGI25153J46596_10013832
273 rootH2_10132224
274 rootH2_10202555
275 rootH1_10060801
276 rootH1_10319024
277 Ga0055542_1000012
278 Ga0055529_1000002
279 Ga0055529_1000021
280 Ga0055531_10000670
281 Ga0065165_1038348
282 Ga0065704_10130816
283 Ga0065704_10145037
284 Ga0065715_10196413
285 Ga0070680_100000298
286 Ga0070680_100445903
287 Ga0070668_100000458
288 Ga0070668_100006019
289 Ga0070668_100019248
290 Ga0070659_100001096
291 Ga0070667_100018546
292 Ga0070708_100036202
293 Ga0070708_100051092
294 Ga0070708_100104604
295 Ga0070681_10161700
296 Ga0070706_100001702
297 Ga0070706_100150246
298 Ga0070706_100352102
299 Ga0070707_100026396
300 Ga0070698_100137476
301 Ga0070672_100006511
302 Ga0070665_100095210
303 Ga0070665_100608081
304 Ga0070664_100003845
305 Ga0068856_100240863
306 Ga0068861_100006049
307 Ga0068860_100217353
308 Ga0068862_100000143
309 Ga0068862_100033718
310 Ga0075364_10117138
311 Ga0075362_10045012
312 Ga0075369_10036671
313 Ga0075429_100301422
314 Ga0079104_1001979
315 Ga0105240_10003989
316 Ga0105238_10049830
317 Ga0105249_10000650
318 Ga0105249_10080848
319 Ga0105239_10002645
320 Ga0157370_10002053
321 Ga0157370_10013224
322 Ga0157370_10340126
323 Ga0163162_10606096
324 Ga0157372_10201728
325 Ga0157380_10003131
326 Ga0182008_10040625
327 Ga0182007_10006845
328 Ga0183368_1002
329 Ga0207425_1000251
330 Ga0207425_1008743
331 Ga0209677_100859
332 Ga0209148_1000008
333 Ga0209455_1000002
334 Ga0209025_1001203
335 Ga0209025_1003206
336 Ga0209758_1010080
337 Ga0209050_1002397
338 Ga0209257_1000117
339 Ga0209257_1007044
340 Ga0207647_10108756
341 Ga0207684_10000159
342 Ga0207684_10122758
343 Ga0207684_10189381
344 Ga0207707_10161237
345 Ga0207695_10002882
346 Ga0207660_10000099
347 Ga0207646_10017866
348 Ga0207694_10029268
349 Ga0207690_10002608
350 Ga0207691_10007031
351 Ga0207679_10000680
352 Ga0207667_10162233
353 Ga0207712_10002873
354 Ga0207668_10000453
355 Ga0207668_10001377
356 Ga0207668_10019566
357 Ga0207658_10029884
358 Ga0207675_100002558
359 Ga0207698_10518372
360 Ga0268266_10035947
361 Ga0268265_10000031
362 Ga0268265_10052934
363 Ga0268264_10195937
364 Ga0265318_10006658
365 Ga0307515_10001105
366 Ga0265338_10083958
367 Ga0265324_10010758
368 Ga0265325_10015286
369 Ga0265316_10045112
370 Ga0265316_10112678
371 Ga0307509_10000031
372 Ga0307509_10012724
373 Ga0307509_10035040
374 Ga0307408_100002618
375 Ga0307408_100003419
376 Ga0307408_100138053
377 Ga0307508_10032734
378 Ga0307514_10016020
379 Ga0307405_10043743
380 Ga0307410_10003026
381 Ga0307406_10209454
382 Ga0307407_10034495
383 Ga0307412_10018288
384 Ga0307412_10048887
385 Ga0307412_10059821
386 Ga0307416_100161108
387 Ga0307414_10000413
388 Ga0307414_10006197
389 Ga0307414_10035621
390 Ga0307411_10010425
391 Ga0307415_100102576
392 Ga0307507_10051281
393 Ga0307507_10105280
394 Ga0395899_0026215
395 Ga0395899_0124143
396 Ga0395900_0000321
397 Ga0395900_0002200
398 Ga0395900_0011940
399 Ga0395900_0028319
400 Ga0395900_0060006
401 Ga0395898_0009110
402 Ga0395898_0140415
403 Ga0395898_0200162
404 Ga0395905_0001061
405 Ga0395905_0005539
406 Ga0395905_0085409
407 Ga0395905_0119863
408 Ga0395905_0247601
409 Ga0436364_0031191
410 Ga0395901_0015438
411 Ga0395901_0041584
412 Ga0395901_0073875
413 Ga0395901_0105333
414 Ga0395901_0154677
415 Ga0395901_0158872
416 Ga0395901_0203671
417 Ga0395901_0206280
418 Ga0237819_05493
419 Ga0453683_0084644
420 Ga0453684_0022380
421 Ga0453684_0033991
422 Ga0453684_0127339
423 Ga0453684_0419567
424 Ga0466959_0003238
425 Ga0495627_003800
426 Ga0495590_0000576
427 Ga0495605_0009170
428 Ga0495584_0014006
429 Ga0495585_0166594
430 Ga0495583_0003714
431 Ga0495606_0001029
432 Ga0495606_0129579
433 Ga0495610_0003449
434 Ga0495616_0001265
435 Ga0495616_0008587
436 Ga0495620_0005910
437 Ga0495643_0008531
438 Ga0495643_0019267
439 Ga0495648_0001286
440 Ga0495587_0017872
441 Ga0495609_0001622
442 Ga0495609_0036976
443 Ga0495625_0000721
444 Ga0495625_0015126
445 Ga0495625_0041607
446 Ga0495661_0002130
447 Ga0495661_0005676
448 Ga0495661_0068326
449 Ga0495671_0000991
450 Ga0495649_0057226
451 Ga0495660_0003180
452 Ga0495660_0169075
453 Ga0495672_0000013
454 Ga0495672_0007226
455 Ga0495676_0032093
456 Ga0495683_0002374
457 Ga0495683_0065212
458 Ga0495686_0008406
459 Ga0495686_0070600
460 Ga0495626_0000054
461 Ga0495626_0002108
462 Ga0495626_0003818
463 Ga0495626_0015120
464 Ga0496104_0321906
465 Ga0496105_0037968
466 Ga0496105_0247780
467 Ga0496116_0006652
468 Ga0496116_0017244
469 Ga0496116_0055239
470 Ga0496119_0007740
471 Ga0496120_0005840
472 Ga0496120_0016991
473 Ga0496121_0011184
474 Ga0496123_0032634
475 Ga0496124_0000504
476 Ga0496125_0008999
477 Ga0496125_0012610
478 Ga0496125_0047145
479 Ga0495682_0027043
480 Ga0501300_000717
481 Ga0501032_0157253
482 Ga0501033_0014792
483 Ga0501036_0080210
484 Ga0501037_0255021
485 Ga0501039_0557036
486 Ga0501042_0000109
487 Ga0501043_0014074
488 Ga0501047_0099353
489 Ga0501047_0117309
490 Ga0501067_0003744
491 Ga0501070_0004711
492 Ga0501074_0093060
493 Ga0501225_0000684
494 Ga0501080_0442584
495 Ga0501083_0124146
496 Ga0501280_001044
497 Ga0501282_000215
498 Ga0501035_0037211
499 Ga0501035_0086392
500 Ga0501035_0421694
501 Ga0501044_0173809
502 nmdc:mga03683_9909_c1
503 nmdc:mga07m45_17866_c1
504 nmdc:mga0sz30_16004_c1
505 Ga0500642_0000091
506 Ga0500642_0063646
507 Ga0500652_000277
508 Ga0500568_0004786
509 Ga0500568_0005501
510 Ga0500573_0000016
511 Ga0500604_0000758
512 Ga0500634_0000603
513 Ga0500636_0007581
514 Ga0500637_0108915
515 Ga0500599_003640
516 Ga0500601_007734
517 Ga0501084_0086268
518 Ga0587068_005691
519 2535486792
520 2644096676
521 2795792419
522 2842758330
523 2891048469
524 2899363837
525 2904463033
526 2919120920
527 2932412995
528 2932420510
529 2979089540
530 2998344948
531 644747151
532 8016586050

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF18899

DUF5655

Domain of unknown function (DUF5655)

217

326

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
5gkj-assembly1.cif.gz_A structure of endoms in apo form 0.7025 24 150
5gkj-assembly1.cif.gz_B structure of endoms in apo form 0.6591 14 150
2vld-assembly1.cif.gz_B crystal structure of a repair endonuclease from pyrococcus abyssi 0.6539 20 150
2fki-assembly1.cif.gz_A nmr structure of protein yjbr from escherichia coli; northeast structural genomics consortium target er226 0.6264 208 304
1p6p-assembly1.cif.gz_A crystal structure of toad liver basic fatty acid-binding protein 0.5931 222 287
ID Description Score Start End Superfamily
af_P9WIY5_101_213_3.40.1350.10 Alpha Beta;3-Layer(aba) Sandwich;Trna Endonuclease; Chain: A, domain 1; 0.7994 20 150 3.40.1350.10
af_P9WIY5_101_213_3.40.1350.10 Alpha Beta;3-Layer(aba) Sandwich;Trna Endonuclease; Chain: A, domain 1; 0.7619 20 150 3.40.1350.10
af_A3KFD5_112_191_2.40.50.100 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.7005 222 256 2.40.50.100
2vldB02 Alpha Beta;3-Layer(aba) Sandwich;Trna Endonuclease; Chain: A, domain 1; 0.677 25 150 3.40.1350.10
2vldB02 Alpha Beta;3-Layer(aba) Sandwich;Trna Endonuclease; Chain: A, domain 1; 0.6605 25 150 3.40.1350.10
ID Description Score Start End GO Terms
AF-A0A1V4VLU9-F1-model_v4 DUF5655 domain-containing protein 0.9823 204 305
AF-A0A3B8LAQ2-F1-model_v4 DUF91 domain-containing protein 0.9805 195 305
AF-A0A4R6ZG97-F1-model_v4 Putative transport protein 0.9802 208 303
AF-A0A2M7TWT3-F1-model_v4 DUF91 domain-containing protein 0.9772 201 305
AF-A0A659QCI0-F1-model_v4 DUF91 domain-containing protein 0.9761 205 305

Map