F372660

General Info

Members Datasets Scaffolds Average Seq Length
264 206 213 657

Family's Representative Sequence

Representative Sequence 3300025922|Ga0207646_10014267|Ga0207646_100142673
Length 765
Sequence VKFLIVGRKVSYPRVDDNVLFLGSDQEGLQSSLVLRPLIFSENEEALVQCEEAVSEQFYVDNGQSAILPTTFLTGYKLSQFAPRFWTSADKLSRSIWPRSTIITGNVAQVRPLWIPSEDRIREANLTKFLALVNQKHELKIKSYPDLHRWSVDKVSDFWSAVWDYTGIVSSRRFEKVVDDLGNFPGAKWFPGARLNFAENLLRHRDDSVALVSRTEEGRSSQINYSGLYQRVGNLANALRRIGVHPGDRVAGYMPNVQETAIAMLATTSVGAVWACCGAELGSGAVLDRLCQIEPKILFAADGYIYKGKRFNILPNVEKVVEGVPSLKKVVLASHIGPELQADNIPISVAFNDLTKSAGPGEPQFEQLPSDHPVYIMFTSGTTGKPKCMVQGAAGVLVNQLKETMLHADVKNTDCVTYIASPSWMMWNWLMSCLGSGARVVLHDGNPLYPVWGAMWKMVQEEKISIMGCSASYINYLRSIGAKPGSTYDLSSLREISQTGSPLSTDGFEWVYREVKQDLHLNSISGGTDINGCFAGGVPTVPVYAGELQGPGLGMKINVYDEDAKPIVDVMGELVCEAPAPSMPLYFWNDPGDQRYREAYFEYYKPKGKNVWRHGDYVIIHSKTGGLTFYGRSDAVIKVSGVRVGTSEIYNVVEKMPEIADSLAVGQNLGEDQRIILFVKMVPGQRLSEDLKEKIKKSLRAEASPKHVPALILEVPDIPYTLNMKKVEIAVANIVNNRPVTNRDALANPESLNFYTEILPVIHKQ

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2537561587 Agrobacterium tumefaciens Cherry 2E-2-2 Isolate Rhizosphere
3 2554235003 Agrobacterium tumefaciens WRT31 Isolate Rhizosphere
4 2558860242 Agrobacterium fabacearum P4 Isolate Rhizosphere
5 2599185210 Rhizobium sp. NFACC06-2 Isolate Rhizoplane
6 2600255279 Rhizobium sp. NFIX01 Isolate Rhizoplane
7 2600255308 Rhizobium sp. NFIX02 Isolate Rhizoplane
8 2643221582 Rhizobium sp. Root651 Isolate Unclassified
9 2643221601 Kitasatospora sp. Root187 Isolate Unclassified
10 2643221631 Kitasatospora sp. Root107 Isolate Unclassified
11 2643221693 Rhizobium sp. Root491 Isolate Unclassified
12 2808606387 Rhizobium sp. SJZ105 Isolate Rhizosphere
13 2818991439 Agrobacterium tumefaciens 1187 Isolate Unclassified
14 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
15 2838675328 Agrobacterium radiobacter SEMIA 410 Isolate Nodule
16 2838714209 Agrobacterium radiobacter SEMIA 435 Isolate Nodule
17 2838719591 Agrobacterium radiobacter SEMIA 436 Isolate Nodule
18 2838724970 Agrobacterium radiobacter SEMIA 437 Isolate Nodule
19 2841846520 Agrobacterium radiobacter SEMIA 440 Isolate Nodule
20 2841859092 Agrobacterium radiobacter SEMIA 4026 Isolate Nodule
21 2842124991 Agrobacterium radiobacter SEMIA 434 Isolate Nodule
22 2842130223 Agrobacterium radiobacter SEMIA 441 Isolate Nodule
23 2842152218 Agrobacterium radiobacter SEMIA 457 Isolate Nodule
24 2842170452 Agrobacterium radiobacter SEMIA 461 Isolate Nodule
25 2842175837 Agrobacterium radiobacter SEMIA 462 Isolate Nodule
26 2842187318 Agrobacterium radiobacter SEMIA 464 Isolate Nodule
27 2842211629 Agrobacterium radiobacter SEMIA 472 Isolate Nodule
28 2842224351 Agrobacterium radiobacter SEMIA 480 Isolate Nodule
29 2842515876 Agrobacterium radiobacter SEMIA 4072 Isolate Nodule
30 2899792073 Agrobacterium deltaense CNPSo 3391 Isolate Nodule
31 2899845264 Agrobacterium fabacearum CNPSo 675 Isolate Unclassified
32 2919114240 Agrobacterium tumefaciens 1457 Isolate Rhizosphere
33 2926754445 Agrobacterium radiobacter SLBN-94 Isolate Rhizosphere
34 2926760298 Agrobacterium tumefaciens SLBN-170 Isolate Rhizosphere
35 2933006813 Rhizobium sp. SEMIA 439 Isolate Unclassified
36 2933011516 Rhizobium sp. SEMIA 4032 Isolate Unclassified
37 2933594066 Agrobacterium fabrum 35/80 Isolate Nodule
38 2979089926 Agrobacterium sp. SORGH_AS 745 Isolate Unclassified
39 2979095461 Agrobacterium tumefaciens SORGH_AS 749 Isolate Unclassified
40 2979100975 Agrobacterium pusense SORGH_AS 755 Isolate Unclassified
41 2984509177 Agrobacterium pusense SORGH_AS260 Isolate Aerial Root
42 2984518228 Agrobacterium pusense SORGH_AS285 Isolate Aerial Root
43 2984537506 Agrobacterium sp. SORGH_AS440 Isolate Aerial Root
44 2984601300 Rhizobium pusense SORGH_AS1083 Isolate Aerial Root
45 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
46 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
47 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
48 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
49 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
50 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
51 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
52 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
53 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
54 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
55 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
56 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
57 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
58 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
59 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
60 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
61 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
62 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
63 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
64 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
65 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
66 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
67 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
68 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
69 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
70 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
71 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
72 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
73 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
74 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
75 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
76 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
77 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
78 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
79 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
80 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
81 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
82 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
83 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
84 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
85 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
86 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
87 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
88 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
89 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
90 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
91 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
92 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
93 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
109 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
110 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
112 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
113 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
114 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
115 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
116 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
117 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
118 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
119 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
120 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
121 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
122 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
123 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
124 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
125 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
126 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
127 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
128 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
129 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
130 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
131 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
132 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
133 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
134 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
135 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
136 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
137 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
138 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
139 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
140 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
141 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
142 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
143 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
144 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
145 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
146 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
147 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
148 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
149 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
150 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
151 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
152 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
153 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
154 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
155 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
156 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
157 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
158 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
159 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
160 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
161 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
162 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
163 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
164 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
165 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
166 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
167 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
168 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
169 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
170 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
171 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
172 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
173 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
174 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
175 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
176 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
177 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
178 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
179 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
180 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
181 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
182 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
183 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
184 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
185 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
186 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
187 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
188 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
189 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
190 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
191 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
192 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
193 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
194 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
195 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
196 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
197 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
198 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
199 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
200 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
201 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
202 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
203 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
204 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
205 650716007 Agrobacterium fabacearum H13-3 Isolate Rhizosphere
206 8003570095 Agrobacterium rhizogenes GBBC3284 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 82.58
Metatranscriptomes 0
Isolates 17.42

Biome Distribution

Category Percentage (%)
Aerial Root 1.52
Bulb 0
Endosphere 2.27
Nodule 7.2
Rhizoplane 1.52
Rhizosphere 77.65
Stem 0
Stem Tuber 0
Unclassified 9.85

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1313184 2162886007 Bacteria 6767
2 JGI25151J46595_10020759 3300003187 Bacteria 2764
3 JGI25406J46586_10003501 3300003203 Bacteria 7374
4 Ga0058692_1000330 3300003856 Bacteria 23529
5 Ga0065704_10070618 3300005289 Bacteria 19040
6 Ga0065707_10000648 3300005295 Bacteria 16747
7 Ga0070683_100024960 3300005329 Bacteria 5361
8 Ga0070683_100080638 3300005329 Bacteria 3046
9 Ga0070670_100016111 3300005331 Bacteria 6415
10 Ga0070687_100008653 3300005343 Bacteria 4321
11 Ga0070661_100010655 3300005344 Bacteria 6395
12 Ga0070669_100010006 3300005353 Bacteria 6741
13 Ga0070675_100038269 3300005354 Bacteria 3908
14 Ga0070709_10003745 3300005434 Bacteria 8171
15 Ga0070710_10032973 3300005437 Bacteria 2809
16 Ga0070681_10005549 3300005458 Bacteria 12189
17 Ga0070681_10006816 3300005458 Bacteria 11118
18 Ga0070707_100000033 3300005468 Bacteria 118390
19 Ga0070707_100013864 3300005468 Bacteria 7549
20 Ga0070707_100036399 3300005468 Bacteria 4696
21 Ga0070698_100004573 3300005471 Bacteria 15192
22 Ga0070679_100016779 3300005530 Bacteria 7077
23 Ga0070679_100053131 3300005530 Bacteria 4033
24 Ga0070697_100006941 3300005536 Bacteria 8808
25 Ga0070697_100022825 3300005536 Archaea 4974
26 Ga0070697_100093314 3300005536 Bacteria 2492
27 Ga0070704_100035308 3300005549 Bacteria 3398
28 Ga0068855_100027318 3300005563 Bacteria 6828
29 Ga0068855_100066546 3300005563 Bacteria 4201
30 Ga0070664_100008618 3300005564 Bacteria 8250
31 Ga0068857_100007819 3300005577 Bacteria 9218
32 Ga0068859_100007707 3300005617 Bacteria 10932
33 Ga0068859_100055194 3300005617 Bacteria 3997
34 Ga0068864_100031823 3300005618 Bacteria 4478
35 Ga0068870_10001927 3300005840 Bacteria 8560
36 Ga0068862_100051218 3300005844 Bacteria 3531
37 Ga0068862_100088941 3300005844 Bacteria 2687
38 Ga0081539_10002243 3300005985 Bacteria 28109
39 Ga0081539_10037076 3300005985 Bacteria 2908
40 Ga0075363_100029132 3300006048 Bacteria 2847
41 Ga0075428_100010084 3300006844 Bacteria 10496
42 Ga0075428_100173168 3300006844 Bacteria 2339
43 Ga0075431_100015313 3300006847 Bacteria 7770
44 Ga0075434_100006320 3300006871 Bacteria 10860
45 Ga0075429_100001928 3300006880 Bacteria 17197
46 Ga0075429_100041254 3300006880 Bacteria 4019
47 Ga0075429_100074095 3300006880 Bacteria 2965
48 Ga0097620_100007707 3300006931 Bacteria 10932
49 Ga0097620_100055191 3300006931 Bacteria 3997
50 Ga0099826_10000390 3300006948 Bacteria 20537
51 Ga0099794_10000822 3300007265 Bacteria 10509
52 Ga0099794_10012256 3300007265 Unclassified 3693
53 Ga0111539_10156015 3300009094 Bacteria 2671
54 Ga0114129_10073779 3300009147 Unclassified 4753
55 Ga0114129_10099926 3300009147 Bacteria 4015
56 Ga0114129_10153921 3300009147 Bacteria 3146
57 Ga0105243_10032080 3300009148 Bacteria 4055
58 Ga0105241_10022093 3300009174 Bacteria 4711
59 Ga0105237_10012951 3300009545 Bacteria 8759
60 Ga0157373_10000761 3300013100 Bacteria 24994
61 Ga0157371_10000235 3300013102 Bacteria 79378
62 Ga0157370_10000400 3300013104 Bacteria 54635
63 Ga0157369_10054299 3300013105 Bacteria 4327
64 Ga0163162_10067467 3300013306 Bacteria 3627
65 Ga0163162_10077927 3300013306 Bacteria 3379
66 Ga0157375_10011504 3300013308 Bacteria 7818
67 Ga0157375_10040131 3300013308 Bacteria 4511
68 Ga0209025_1000277 3300025294 Bacteria 117930
69 Ga0207643_10005691 3300025908 Bacteria 6665
70 Ga0207684_10066102 3300025910 Bacteria 3071
71 Ga0207654_10010849 3300025911 Bacteria 4638
72 Ga0207657_10015624 3300025919 Bacteria 7345
73 Ga0207646_10000001 3300025922 Bacteria 1242027
74 Ga0207646_10014267 3300025922 Bacteria 7555
75 Ga0207646_10017385 3300025922 Bacteria 6732
76 Ga0207646_10086538 3300025922 Bacteria 2804
77 Ga0207681_10007347 3300025923 Bacteria 6749
78 Ga0207659_10002780 3300025926 Bacteria 10441
79 Ga0207664_10039317 3300025929 Bacteria 3673
80 Ga0207690_10048684 3300025932 Bacteria 2820
81 Ga0207691_10003767 3300025940 Bacteria 14725
82 Ga0207689_10110127 3300025942 Bacteria 2263
83 Ga0207679_10077053 3300025945 Bacteria 2535
84 Ga0207667_10116752 3300025949 Unclassified 2750
85 Ga0207676_10019546 3300026095 Bacteria 4944
86 Ga0207674_10000548 3300026116 Bacteria 49225
87 Ga0207674_10013224 3300026116 Bacteria 9176
88 Ga0207674_10034332 3300026116 Bacteria 5304
89 Ga0207674_10068356 3300026116 Bacteria 3575
90 Ga0209371_1000035 3300027312 Bacteria 368979
91 Ga0209371_1000449 3300027312 Bacteria 41139
92 Ga0209282_1000427 3300027666 Bacteria 20688
93 Ga0209588_1000194 3300027671 Bacteria 16800
94 Ga0265337_1000064 3300028556 Bacteria 48829
95 Ga0265326_10001044 3300028558 Bacteria 9894
96 Ga0265319_1001979 3300028563 Bacteria 11555
97 Ga0265334_10000705 3300028573 Bacteria 16743
98 Ga0265338_10000565 3300028800 Bacteria 65112
99 Ga0265338_10000770 3300028800 Bacteria 54617
100 Ga0265338_10002634 3300028800 Bacteria 26472
101 Ga0265338_10012234 3300028800 Bacteria 9800
102 Ga0268256_1000037 3300030500 Bacteria 367024
103 Ga0268256_1009433 3300030500 Bacteria 3238
104 Ga0268256_1009773 3300030500 Bacteria 3149
105 Ga0265332_10001004 3300031238 Bacteria 16641
106 Ga0265332_10014140 3300031238 Bacteria 3532
107 Ga0265325_10000178 3300031241 Bacteria 45079
108 Ga0265339_10013869 3300031249 Bacteria 4876
109 Ga0265331_10000486 3300031250 Bacteria 37896
110 Ga0265316_10015192 3300031344 Bacteria 6742
111 Ga0265313_10000610 3300031595 Bacteria 37114
112 Ga0316579_10040227 3300031691 Bacteria 2167
113 Ga0265314_10000790 3300031711 Bacteria 37619
114 Ga0265342_10006332 3300031712 Bacteria 8825
115 Ga0316576_10007453 3300031727 Bacteria 6893
116 Ga0316577_10007803 3300031733 Bacteria 5715
117 Ga0307413_10032740 3300031824 Bacteria 2950
118 Ga0307410_10015033 3300031852 Bacteria 4577
119 Ga0307406_10040392 3300031901 Bacteria 2901
120 Ga0307407_10011201 3300031903 Bacteria 4257
121 Ga0307407_10034693 3300031903 Bacteria 2765
122 Ga0307409_100024343 3300031995 Bacteria 4221
123 Ga0307416_100035627 3300032002 Bacteria 3804
124 Ga0307416_100111676 3300032002 Bacteria 2410
125 Ga0307414_10012053 3300032004 Bacteria 5099
126 Ga0307415_100012639 3300032126 Bacteria 4889
127 Ga0307415_100085224 3300032126 Bacteria 2269
128 Ga0373923_0006182 3300035111 Bacteria 4120
129 Ga0373936_0018574 3300035113 Bacteria 2687
130 Ga0373953_0011079 3300035117 Bacteria 3153
131 Ga0373956_0008727 3300035119 Bacteria 4105
132 Ga0373955_0008345 3300035172 Bacteria 4808
133 Ga0373935_0045413 3300035692 Bacteria 2772
134 Ga0373933_0016123 3300035724 Bacteria 4174
135 Ga0373937_0053297 3300036401 Bacteria 3710
136 Ga0373937_0084541 3300036401 Bacteria 2936
137 Ga0373925_0000520 3300037068 Bacteria 38381
138 Ga0373925_0042326 3300037068 Bacteria 3379
139 Ga0395899_0012708 3300037312 Bacteria 6451
140 Ga0395898_0002923 3300037466 Bacteria 19435
141 Ga0395901_0067319 3300038443 Bacteria 3729
142 Ga0400484_16337 3300038725 Bacteria 2514
143 Ga0400490_57795 3300038726 Bacteria 22411
144 Ga0400486_02226 3300038742 Bacteria 15002
145 Ga0400486_18801 3300038742 Bacteria 7265
146 Ga0400483_208884 3300039062 Bacteria 74789
147 Ga0400489_03178 3300039093 Bacteria 4043
148 Ga0451577_0017908 3300042876 Bacteria 6536
149 Ga0451577_0024131 3300042876 Bacteria 5533
150 Ga0466961_0060387 3300044693 Bacteria 2411
151 Ga0453684_0050615 3300044712 Bacteria 5461
152 Ga0453684_0059457 3300044712 Unclassified 4927
153 Ga0453684_0071676 3300044712 Bacteria 4380
154 Ga0453684_0105540 3300044712 Unclassified 3435
155 Ga0451576_0022286 3300045051 Archaea 6870
156 Ga0466967_0050476 3300045976 Bacteria 3643
157 Ga0495651_0024686 3300046462 Bacteria 4675
158 Ga0495580_0021520 3300046472 Bacteria 4756
159 Ga0495662_0002095 3300046476 Bacteria 9997
160 Ga0495664_0016912 3300046477 Bacteria 4164
161 Ga0495608_0012319 3300046511 Bacteria 5940
162 Ga0495628_0034343 3300046516 Bacteria 4079
163 Ga0495652_0078380 3300046529 Bacteria 2735
164 Ga0495640_0019075 3300046533 Bacteria 5070
165 Ga0495645_0054322 3300046543 Bacteria 2910
166 Ga0495633_0009078 3300046558 Bacteria 5528
167 Ga0495667_0005694 3300046559 Bacteria 8436
168 Ga0495635_0028231 3300046663 Bacteria 3900
169 Ga0495657_0010291 3300046675 Bacteria 7043
170 Ga0495657_0017706 3300046675 Bacteria 5168
171 Ga0495599_0021156 3300046678 Bacteria 4057
172 Ga0495613_0018159 3300046689 Bacteria 5242
173 Ga0495613_0023008 3300046689 Bacteria 4644
174 Ga0495624_0028099 3300046690 Bacteria 3678
175 Ga0495600_0013307 3300046809 Bacteria 5167
176 Ga0495604_0015806 3300047317 Bacteria 6023
177 Ga0495674_0065120 3300047319 Bacteria 3166
178 Ga0495680_0051224 3300047322 Bacteria 3224
179 Ga0495675_0011908 3300047444 Bacteria 5465
180 Ga0495675_0026300 3300047444 Bacteria 3710
181 Ga0495685_002941 3300047447 Bacteria 5389
182 Ga0495681_0030568 3300047470 Bacteria 2740
183 Ga0495602_0048163 3300048088 Bacteria 3834
184 Ga0496102_0103555 3300048905 Bacteria 2647
185 Ga0496117_0000066 3300048920 Bacteria 253534
186 Ga0496118_0000231 3300048921 Bacteria 97930
187 Ga0496120_0000463 3300048923 Bacteria 64041
188 Ga0496122_0000057 3300048925 Bacteria 253452
189 Ga0496123_0000401 3300048926 Bacteria 79665
190 Ga0496124_0004181 3300048927 Bacteria 17013
191 Ga0496125_0039147 3300048928 Bacteria 4088
192 Ga0501298_006156 3300049521 Bacteria 1954
193 Ga0501040_0058388 3300049576 Bacteria 2650
194 Ga0501072_0039348 3300049588 Bacteria 3713
195 Ga0501075_0024097 3300049591 Bacteria 4457
196 Ga0501076_0101920 3300049592 Bacteria 2314
197 Ga0501077_0012973 3300049593 Bacteria 5219
198 Ga0501077_0030918 3300049593 Bacteria 3407
199 nmdc:mga00v17_87_c1 3300050491 Bacteria 56345
200 nmdc:mga05p37_131779_c1 3300050507 Bacteria 3067
201 nmdc:mga05p37_221069_c1 3300050507 Unclassified 2286
202 nmdc:mga05p37_22221_c1 3300050507 Bacteria 7691
203 nmdc:mga05p37_450_c1 3300050507 Bacteria 44688
204 nmdc:mga05p37_82492_c1 3300050507 Bacteria 3961
205 nmdc:mga09592_26612_c1 3300050508 Bacteria 4794
206 nmdc:mga09592_832_c1 3300050508 Bacteria 23935
207 nmdc:mga0n895_16304_c1 3300050512 Bacteria 6814
208 nmdc:mga0sz30_570_c1 3300050516 Bacteria 13839
209 Ga0500561_0000056 3300053137 Bacteria 21920
210 Ga0501084_0008692 3300054114 Bacteria 8398
211 Ga0501084_0022723 3300054114 Bacteria 5235
212 Ga0590075_006250 3300059424 Bacteria 2825
213 Ga0501082_0032750 3300060353 Bacteria 4484

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300026116 Ga0207674_10068356 Ga0207674_100683561 542
2 3300035113 Ga0373936_0018574 Ga0373936_0018574_23_1789 571
3 3300049521 Ga0501298_006156 Ga0501298_006156_17_1783 580
4 3300026095 Ga0207676_10019546 Ga0207676_100195461 593
5 3300049588 Ga0501072_0039348 Ga0501072_0039348_1028_3016 594
6 3300049576 Ga0501040_0058388 Ga0501040_0058388_57_2045 595
7 3300044693 Ga0466961_0060387 Ga0466961_0060387_61_1893 596
8 3300009147 Ga0114129_10153921 Ga0114129_101539213 597
9 3300050507 nmdc:mga05p37_82492_c1 nmdc:mga05p37_82492_c1_1048_3033 597
10 3300031727 Ga0316576_10007453 Ga0316576_100074533 600
11 3300031733 Ga0316577_10007803 Ga0316577_100078036 600
12 3300046472 Ga0495580_0021520 Ga0495580_0021520_2267_4270 600
13 3300046476 Ga0495662_0002095 Ga0495662_0002095_3090_5093 600
14 3300046533 Ga0495640_0019075 Ga0495640_0019075_263_2266 600
15 3300046675 Ga0495657_0010291 Ga0495657_0010291_2476_4479 600
16 3300046689 Ga0495613_0018159 Ga0495613_0018159_2781_4784 600
17 3300005468 Ga0070707_100036399 Ga0070707_1000363993 603
18 3300025922 Ga0207646_10086538 Ga0207646_100865382 603
19 3300059424 Ga0590075_006250 Ga0590075_006250_572_2521 603
20 3300037312 Ga0395899_0012708 Ga0395899_0012708_392_2377 604
21 3300037466 Ga0395898_0002923 Ga0395898_0002923_8446_10431 604
22 3300038443 Ga0395901_0067319 Ga0395901_0067319_983_2968 604
23 3300049593 Ga0501077_0012973 Ga0501077_0012973_2789_4777 604
24 3300060353 Ga0501082_0032750 Ga0501082_0032750_1372_3360 604
25 3300013306 Ga0163162_10077927 Ga0163162_100779272 605
26 3300026116 Ga0207674_10013224 Ga0207674_100132241 605
27 3300054114 Ga0501084_0008692 Ga0501084_0008692_5143_7131 605
28 3300009148 Ga0105243_10032080 Ga0105243_100320803 606
29 3300006048 Ga0075363_100029132 Ga0075363_1000291322 608
30 3300013100 Ga0157373_10000761 Ga0157373_1000076111 608
31 3300013102 Ga0157371_10000235 Ga0157371_1000023525 608
32 3300013104 Ga0157370_10000400 Ga0157370_1000040044 608
33 3300048920 Ga0496117_0000066 Ga0496117_0000066_51909_53864 608
34 3300048921 Ga0496118_0000231 Ga0496118_0000231_51962_53917 608
35 3300048923 Ga0496120_0000463 Ga0496120_0000463_24964_26919 608
36 3300048925 Ga0496122_0000057 Ga0496122_0000057_199589_201544 608
37 3300048926 Ga0496123_0000401 Ga0496123_0000401_25802_27757 608
38 3300048927 Ga0496124_0004181 Ga0496124_0004181_1019_2974 608
39 3300050491 nmdc:mga00v17_87_c1 nmdc:mga00v17_87_c1_2328_4283 608
40 3300050516 nmdc:mga0sz30_570_c1 nmdc:mga0sz30_570_c1_6668_8623 608
41 3300053137 Ga0500561_0000056 Ga0500561_0000056_16373_18328 608
42 3300047470 Ga0495681_0030568 Ga0495681_0030568_807_2729 609
43 3300005471 Ga0070698_100004573 Ga0070698_10000457317 610
44 3300013308 Ga0157375_10011504 Ga0157375_100115045 611
45 3300003187 JGI25151J46595_10020759 JGI25151J46595_100207592 613
46 3300025294 Ga0209025_1000277 Ga0209025_100027766 613
47 3300039062 Ga0400483_208884 Ga0400483_208884_29300_31246 614
48 3300005331 Ga0070670_100016111 Ga0070670_1000161111 615
49 3300005618 Ga0068864_100031823 Ga0068864_1000318233 615
50 iso_pu_bacteria 2995463766 2995470630 615
51 3300003856 Ga0058692_1000330 Ga0058692_100033023 616
52 3300027312 Ga0209371_1000035 Ga0209371_100003546 616
53 3300027312 Ga0209371_1000449 Ga0209371_10004492 616
54 3300030500 Ga0268256_1000037 Ga0268256_100003745 616
55 3300030500 Ga0268256_1009433 Ga0268256_10094332 616
56 3300031852 Ga0307410_10015033 Ga0307410_100150331 616
57 3300048905 Ga0496102_0103555 Ga0496102_0103555_162_2183 616
58 3300028800 Ga0265338_10012234 Ga0265338_100122343 618
59 3300031238 Ga0265332_10014140 Ga0265332_100141402 618
60 3300031241 Ga0265325_10000178 Ga0265325_1000017824 618
61 3300031250 Ga0265331_10000486 Ga0265331_1000048624 618
62 3300031595 Ga0265313_10000610 Ga0265313_100006106 618
63 3300031711 Ga0265314_10000790 Ga0265314_1000079024 618
64 3300031712 Ga0265342_10006332 Ga0265342_100063322 618
65 3300047444 Ga0495675_0011908 Ga0495675_0011908_2599_4593 618
66 3300005343 Ga0070687_100008653 Ga0070687_1000086533 619
67 3300005344 Ga0070661_100010655 Ga0070661_1000106552 619
68 3300005353 Ga0070669_100010006 Ga0070669_1000100061 619
69 3300005354 Ga0070675_100038269 Ga0070675_1000382692 619
70 3300005458 Ga0070681_10005549 Ga0070681_100055496 619
71 3300005530 Ga0070679_100053131 Ga0070679_1000531312 619
72 3300005577 Ga0068857_100007819 Ga0068857_1000078195 619
73 3300005617 Ga0068859_100007707 Ga0068859_1000077077 619
74 3300005840 Ga0068870_10001927 Ga0068870_100019271 619
75 3300006931 Ga0097620_100007707 Ga0097620_1000077077 619
76 3300009094 Ga0111539_10156015 Ga0111539_101560151 619
77 3300013308 Ga0157375_10040131 Ga0157375_100401311 619
78 3300025908 Ga0207643_10005691 Ga0207643_100056914 619
79 3300025923 Ga0207681_10007347 Ga0207681_100073473 619
80 3300025926 Ga0207659_10002780 Ga0207659_100027806 619
81 3300025932 Ga0207690_10048684 Ga0207690_100486842 619
82 3300025940 Ga0207691_10003767 Ga0207691_100037672 619
83 3300025945 Ga0207679_10077053 Ga0207679_100770532 619
84 3300026116 Ga0207674_10000548 Ga0207674_1000054819 619
85 3300026116 Ga0207674_10034332 Ga0207674_100343321 619
86 3300047317 Ga0495604_0015806 Ga0495604_0015806_2743_4761 619
87 3300047447 Ga0495685_002941 Ga0495685_002941_867_2876 619
88 iso_pu_bacteria 2643221601 2644015673 619
89 iso_pu_bacteria 2643221631 2644177402 619
90 iso_pu_bacteria 2818991472 2819743998 619
91 3300005563 Ga0068855_100027318 Ga0068855_1000273182 620
92 3300005564 Ga0070664_100008618 Ga0070664_1000086184 620
93 3300009174 Ga0105241_10022093 Ga0105241_100220933 620
94 3300009545 Ga0105237_10012951 Ga0105237_100129513 620
95 3300025911 Ga0207654_10010849 Ga0207654_100108492 620
96 3300025919 Ga0207657_10015624 Ga0207657_100156245 620
97 3300006871 Ga0075434_100006320 Ga0075434_1000063205 621
98 3300050507 nmdc:mga05p37_131779_c1 nmdc:mga05p37_131779_c1_725_2773 621
99 3300050512 nmdc:mga0n895_16304_c1 nmdc:mga0n895_16304_c1_2663_4765 621
100 3300005458 Ga0070681_10006816 Ga0070681_100068162 623
101 3300006948 Ga0099826_10000390 Ga0099826_100003905 623
102 3300027666 Ga0209282_1000427 Ga0209282_100042719 623
103 3300030500 Ga0268256_1009773 Ga0268256_10097732 623
104 3300046558 Ga0495633_0009078 Ga0495633_0009078_3202_5157 623
105 3300048928 Ga0496125_0039147 Ga0496125_0039147_2001_3956 623
106 iso_pu_bacteria 2537561587 2537875740 623
107 iso_pu_bacteria 2554235003 2554244833 623
108 iso_pu_bacteria 2558860242 2559297333 623
109 iso_pu_bacteria 2599185210 2599605882 623
110 iso_pu_bacteria 2600255279 2601611564 623
111 iso_pu_bacteria 2600255308 2601748884 623
112 iso_pu_bacteria 2643221582 2643921875 623
113 iso_pu_bacteria 2643221693 2644519842 623
114 iso_pu_bacteria 2808606387 2808988709 623
115 iso_pu_bacteria 2818991439 2819561428 623
116 iso_pu_bacteria 2838675328 2838679419 623
117 iso_pu_bacteria 2838714209 2838718776 623
118 iso_pu_bacteria 2838719591 2838723774 623
119 iso_pu_bacteria 2838724970 2838729097 623
120 iso_pu_bacteria 2841846520 2841851135 623
121 iso_pu_bacteria 2841859092 2841863940 623
122 iso_pu_bacteria 2842124991 2842129794 623
123 iso_pu_bacteria 2842130223 2842134462 623
124 iso_pu_bacteria 2842152218 2842156458 623
125 iso_pu_bacteria 2842170452 2842175021 623
126 iso_pu_bacteria 2842175837 2842179938 623
127 iso_pu_bacteria 2842187318 2842191644 623
128 iso_pu_bacteria 2842211629 2842215961 623
129 iso_pu_bacteria 2842224351 2842228539 623
130 iso_pu_bacteria 2842515876 2842520722 623
131 iso_pu_bacteria 2899792073 2899794675 623
132 iso_pu_bacteria 2899845264 2899850387 623
133 iso_pu_bacteria 2919114240 2919118850 623
134 iso_pu_bacteria 2926754445 2926758129 623
135 iso_pu_bacteria 2926760298 2926764303 623
136 iso_pu_bacteria 2933006813 2933011232 623
137 iso_pu_bacteria 2933011516 2933016228 623
138 iso_pu_bacteria 2933594066 2933598942 623
139 iso_pu_bacteria 2979089926 2979090593 623
140 iso_pu_bacteria 2979095461 2979096119 623
141 iso_pu_bacteria 2979100975 2979101647 623
142 iso_pu_bacteria 2984509177 2984510402 623
143 iso_pu_bacteria 2984518228 2984518894 623
144 iso_pu_bacteria 2984537506 2984538751 623
145 iso_pu_bacteria 2984601300 2984605457 623
146 iso_pu_bacteria 650716007 650843766 623
147 iso_pu_bacteria 8003570095 8003573973 623
148 3300005329 Ga0070683_100024960 Ga0070683_1000249603 624
149 3300005329 Ga0070683_100080638 Ga0070683_1000806382 624
150 3300005434 Ga0070709_10003745 Ga0070709_100037456 624
151 3300005437 Ga0070710_10032973 Ga0070710_100329732 624
152 3300005530 Ga0070679_100016779 Ga0070679_1000167792 624
153 3300013105 Ga0157369_10054299 Ga0157369_100542993 624
154 3300025929 Ga0207664_10039317 Ga0207664_100393172 624
155 3300028556 Ga0265337_1000064 Ga0265337_100006437 624
156 3300028558 Ga0265326_10001044 Ga0265326_100010443 624
157 3300028563 Ga0265319_1001979 Ga0265319_10019794 624
158 3300028573 Ga0265334_10000705 Ga0265334_100007054 624
159 3300028800 Ga0265338_10000565 Ga0265338_1000056543 624
160 3300028800 Ga0265338_10000770 Ga0265338_1000077018 624
161 3300028800 Ga0265338_10002634 Ga0265338_1000263416 624
162 3300031238 Ga0265332_10001004 Ga0265332_1000100411 624
163 3300031344 Ga0265316_10015192 Ga0265316_100151925 624
164 3300035111 Ga0373923_0006182 Ga0373923_0006182_1251_3293 624
165 3300035117 Ga0373953_0011079 Ga0373953_0011079_1097_3133 624
166 3300035119 Ga0373956_0008727 Ga0373956_0008727_1402_3444 624
167 3300035172 Ga0373955_0008345 Ga0373955_0008345_1684_3726 624
168 3300035692 Ga0373935_0045413 Ga0373935_0045413_490_2532 624
169 3300035724 Ga0373933_0016123 Ga0373933_0016123_1164_3206 624
170 3300036401 Ga0373937_0053297 Ga0373937_0053297_1511_3553 624
171 3300037068 Ga0373925_0000520 Ga0373925_0000520_23120_25138 624
172 3300037068 Ga0373925_0042326 Ga0373925_0042326_1321_3363 624
173 3300042876 Ga0451577_0024131 Ga0451577_0024131_2098_4053 624
174 3300044712 Ga0453684_0105540 Ga0453684_0105540_71_2026 624
175 3300045976 Ga0466967_0050476 Ga0466967_0050476_1562_3580 624
176 3300046462 Ga0495651_0024686 Ga0495651_0024686_1173_3215 624
177 3300046477 Ga0495664_0016912 Ga0495664_0016912_400_2442 624
178 3300046511 Ga0495608_0012319 Ga0495608_0012319_1914_3956 624
179 3300046516 Ga0495628_0034343 Ga0495628_0034343_411_2453 624
180 3300046529 Ga0495652_0078380 Ga0495652_0078380_648_2690 624
181 3300046543 Ga0495645_0054322 Ga0495645_0054322_388_2430 624
182 3300046559 Ga0495667_0005694 Ga0495667_0005694_2473_4515 624
183 3300046663 Ga0495635_0028231 Ga0495635_0028231_790_2832 624
184 3300046675 Ga0495657_0017706 Ga0495657_0017706_1696_3738 624
185 3300046678 Ga0495599_0021156 Ga0495599_0021156_1821_3863 624
186 3300046689 Ga0495613_0023008 Ga0495613_0023008_2122_4164 624
187 3300046690 Ga0495624_0028099 Ga0495624_0028099_990_3032 624
188 3300046809 Ga0495600_0013307 Ga0495600_0013307_1007_3049 624
189 3300047319 Ga0495674_0065120 Ga0495674_0065120_991_3033 624
190 3300047322 Ga0495680_0051224 Ga0495680_0051224_1062_3104 624
191 3300047444 Ga0495675_0026300 Ga0495675_0026300_921_2963 624
192 3300048088 Ga0495602_0048163 Ga0495602_0048163_1416_3458 624
193 3300050507 nmdc:mga05p37_221069_c1 nmdc:mga05p37_221069_c1_223_2178 624
194 3300005985 Ga0081539_10002243 Ga0081539_1000224310 625
195 3300006847 Ga0075431_100015313 Ga0075431_1000153135 625
196 3300032126 Ga0307415_100085224 Ga0307415_1000852241 625
197 3300031824 Ga0307413_10032740 Ga0307413_100327402 626
198 3300031901 Ga0307406_10040392 Ga0307406_100403921 626
199 3300031903 Ga0307407_10011201 Ga0307407_100112013 626
200 3300031995 Ga0307409_100024343 Ga0307409_1000243432 626
201 3300032002 Ga0307416_100035627 Ga0307416_1000356272 626
202 3300032002 Ga0307416_100111676 Ga0307416_1001116762 626
203 3300032004 Ga0307414_10012053 Ga0307414_100120532 626
204 3300032126 Ga0307415_100012639 Ga0307415_1000126393 626
205 3300038742 Ga0400486_02226 Ga0400486_02226_9647_11593 626
206 3300038742 Ga0400486_18801 Ga0400486_18801_1282_3228 626
207 3300028800 Ga0265338_10012234 Ga0265338_100122342 627
208 3300031241 Ga0265325_10000178 Ga0265325_1000017823 627
209 3300031249 Ga0265339_10013869 Ga0265339_100138692 627
210 3300031250 Ga0265331_10000486 Ga0265331_1000048623 627
211 3300031595 Ga0265313_10000610 Ga0265313_100006107 627
212 3300031711 Ga0265314_10000790 Ga0265314_1000079023 627
213 3300005563 Ga0068855_100066546 Ga0068855_1000665462 628
214 3300013306 Ga0163162_10067467 Ga0163162_100674671 628
215 3300025942 Ga0207689_10110127 Ga0207689_101101271 628
216 3300025949 Ga0207667_10116752 Ga0207667_101167521 628
217 3300031903 Ga0307407_10034693 Ga0307407_100346932 628
218 3300036401 Ga0373937_0084541 Ga0373937_0084541_64_2028 628
219 3300038725 Ga0400484_16337 Ga0400484_16337_236_2191 628
220 3300038726 Ga0400490_57795 Ga0400490_57795_20333_22351 628
221 3300039093 Ga0400489_03178 Ga0400489_03178_757_2706 628
222 3300003203 JGI25406J46586_10003501 JGI25406J46586_100035011 629
223 3300005536 Ga0070697_100093314 Ga0070697_1000933142 629
224 3300005617 Ga0068859_100055194 Ga0068859_1000551942 629
225 3300005844 Ga0068862_100051218 Ga0068862_1000512183 629
226 3300005985 Ga0081539_10037076 Ga0081539_100370762 629
227 3300006844 Ga0075428_100010084 Ga0075428_1000100844 629
228 3300006880 Ga0075429_100041254 Ga0075429_1000412543 629
229 3300006880 Ga0075429_100074095 Ga0075429_1000740953 629
230 3300006931 Ga0097620_100055191 Ga0097620_1000551912 629
231 3300009147 Ga0114129_10073779 Ga0114129_100737793 629
232 3300009147 Ga0114129_10099926 Ga0114129_100999263 629
233 3300031691 Ga0316579_10040227 Ga0316579_100402271 629
234 3300042876 Ga0451577_0017908 Ga0451577_0017908_2510_4465 629
235 3300044712 Ga0453684_0071676 Ga0453684_0071676_356_2311 629
236 3300049593 Ga0501077_0030918 Ga0501077_0030918_360_2318 629
237 3300050507 nmdc:mga05p37_22221_c1 nmdc:mga05p37_22221_c1_5339_7294 629
238 3300050508 nmdc:mga09592_26612_c1 nmdc:mga09592_26612_c1_2297_4189 629
239 3300005844 Ga0068862_100088941 Ga0068862_1000889412 630
240 3300006844 Ga0075428_100173168 Ga0075428_1001731681 630
241 3300006880 Ga0075429_100001928 Ga0075429_1000019287 630
242 3300007265 Ga0099794_10012256 Ga0099794_100122562 630
243 3300025910 Ga0207684_10066102 Ga0207684_100661022 630
244 3300044712 Ga0453684_0050615 Ga0453684_0050615_2820_4775 630
245 3300044712 Ga0453684_0059457 Ga0453684_0059457_553_2511 630
246 3300045051 Ga0451576_0022286 Ga0451576_0022286_1166_3121 630
247 3300049591 Ga0501075_0024097 Ga0501075_0024097_1946_3904 630
248 3300049592 Ga0501076_0101920 Ga0501076_0101920_152_2110 630
249 3300050507 nmdc:mga05p37_450_c1 nmdc:mga05p37_450_c1_24887_26890 630
250 3300050508 nmdc:mga09592_832_c1 nmdc:mga09592_832_c1_18624_20627 630
251 3300054114 Ga0501084_0022723 Ga0501084_0022723_1154_3112 630
252 3300005468 Ga0070707_100000033 Ga0070707_10000003332 631
253 3300005468 Ga0070707_100013864 Ga0070707_1000138643 631
254 3300005536 Ga0070697_100006941 Ga0070697_1000069417 631
255 3300005536 Ga0070697_100022825 Ga0070697_1000228252 631
256 3300005549 Ga0070704_100035308 Ga0070704_1000353082 631
257 3300007265 Ga0099794_10000822 Ga0099794_100008224 631
258 3300025922 Ga0207646_10000001 Ga0207646_1000000188 631
259 3300025922 Ga0207646_10014267 Ga0207646_100142673 631
260 3300025922 Ga0207646_10017385 Ga0207646_100173853 631
261 3300027671 Ga0209588_1000194 Ga0209588_100019411 631
262 2162886007 SwRhRL2b_contig_1313184 SwRhRL2b_0406.00002490 633
263 3300005289 Ga0065704_10070618 Ga0065704_100706185 633
264 3300005295 Ga0065707_10000648 Ga0065707_1000064811 633

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF16177

ACAS_N

Acetyl-coenzyme A synthetase N-terminus

144

201

0.92

PF00501

AMP-binding

AMP-binding enzyme

197

587

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
5vpv-assembly3.cif.gz_C crystal structure of apo cryptococcus neoformans h99 acetyl-coa synthetase with an acetylated active site lysine 0.9324 11 498
8v4p-assembly1.cif.gz_C crystal structure of acetyl-coa synthetase 2 in complex with adenosine-5'-allylphosphate from candida albicans 0.9296 15 498
8v5g-assembly1.cif.gz_C crystal structure of acetyl-coa synthetase from cryptococcus neoformans h99 in complex with an ethylsulfamide amp inhibitor 0.9205 15 494
7knp-assembly1.cif.gz_C crystal structure of acetyl-coa synthetase in complex with adenosine-5'-butylphosphate from cryptococcus neoformans var. grubii serotype a (h99) 0.9189 12 495
7kdn-assembly3.cif.gz_C crystal structure of acetyl-coa synthetase in complex with adenosine-5'-propylphosphate from aspergillus fumigatus 0.9182 7 498
ID Description Score Start End Superfamily
af_A3QK15_25_542_3.40.50.12780 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;ANL, N-terminal domain 0.9856 2 500 3.40.50.12780
af_Q21166_65_572_3.40.50.12780 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;ANL, N-terminal domain 0.9647 5 500 3.40.50.12780
af_Q21166_574_699_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9497 502 623 3.30.300.30
af_A3QK15_25_542_3.40.50.12780 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;ANL, N-terminal domain 0.948 2 500 3.40.50.12780
af_Q21166_65_572_3.40.50.12780 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;ANL, N-terminal domain 0.9405 5 500 3.40.50.12780
ID Description Score Start End GO Terms
AF-X1IGE3-F1-model_v4 AMP-dependent synthetase/ligase domain-containing protein 0.9878 143 431 GO:0030729
AF-A0A351EL99-F1-model_v4 Acetoacetate--CoA ligase 0.9872 296 475 GO:0030729
AF-A0A383DVE3-F1-model_v4 AMP-dependent synthetase/ligase domain-containing protein 0.9856 1 191 GO:0030729
AF-A0A3P4LU65-F1-model_v4 deleted 0.9802 334 454
AF-X1IGE3-F1-model_v4 AMP-dependent synthetase/ligase domain-containing protein 0.9744 143 431 GO:0030729

Feature Viewer

pLDDT pTM Quality
89.47 0.82 High
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Predicted Structure (AlphaFold2)

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