F372168

General Info

Members Datasets Scaffolds Average Seq Length
263 197 527 318

Family's Representative Sequence

Representative Sequence 3300049574|Ga0501038_0123998|Ga0501038_0123998_308_1393
Length 354
Sequence MCPAFWVIPVVSSTQKVLPIRYCRPSHHTLEFSIVKQPVRVTVTGAAGQISYSLLFRIASGSMLGPDQPVILQMLEITPALEALKGVAMELDDCAFPLLAGLVCTDDPMVAFKDADYALLVGARPRGPGMERKDLLEANAAIFSVQGKAIDAVAKKSIKVLVVGNPANTNALIAQRNAPSINPRQFTSMMRLDHNRAMSQLATKTGKTVNDVKKIIVWGNHSATQYPDISKALVDGKAAEPLVDRAWYEGDFIPTVQQRGAAIIKARGASSAVDHMRSWALGTSEGDWVSMGVYSDGSYGIEKGLIYSFPCVCKNGDWEIVQGLDVSDFSREKMKFTEKELCEERDGDKHLLPN

Samples

Sample ID Description Type Environment
1 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
12 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
13 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
14 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
20 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
21 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
22 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
23 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
35 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
36 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
37 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
38 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
40 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
41 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
42 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
43 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
45 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
47 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
49 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
50 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
51 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
52 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
53 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
54 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
55 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
56 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
57 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
58 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
59 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
60 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
61 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300027462 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes) (version 2) Metagenome Rhizosphere
82 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
83 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
84 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
88 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
89 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
90 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
91 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
92 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
93 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
94 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
95 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
96 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
97 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
98 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
99 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
100 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
101 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
102 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
103 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
104 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
105 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
106 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
107 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
108 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
109 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
110 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
111 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
112 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
113 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
114 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
115 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
116 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
117 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
118 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
119 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
120 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
121 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
122 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
123 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
124 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
125 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
126 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
127 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
128 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
129 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
130 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
131 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
132 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
133 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
134 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
135 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
136 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
137 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
138 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
139 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
140 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
141 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
142 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
143 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
144 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
145 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
146 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
147 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
148 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
149 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
150 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
151 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
152 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
153 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
154 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
155 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
160 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
162 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
164 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
165 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
166 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
167 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
168 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
169 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
170 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
171 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
174 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
175 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
176 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
177 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
178 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
179 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
180 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
181 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
182 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
183 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
184 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
185 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
186 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
187 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
188 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
189 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
190 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
191 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
192 2585428157 Microbacterium sp. CF335 Isolate Rhizosphere
193 2738541276 Cellvibrio sp. YR554 Isolate Unclassified
194 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
195 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
196 2932398195 Dietzia sp. 2505 Isolate Rhizosphere
197 2984580707 Microbacterium paludicola SORGH_AS919 Isolate Aerial Root

Type Distribution

Type Percentage (%)
Metagenomes 96.2
Metatranscriptomes 1.52
Isolates 2.28

Biome Distribution

Category Percentage (%)
Aerial Root 0.38
Bulb 0
Endosphere 4.94
Nodule 0
Rhizoplane 3.8
Rhizosphere 79.47
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501038_0123998 3300049574 Bacteria 2128
2 JGI25406J46586_10006385 3300003203 Bacteria 5437
3 rootH1_10005612 3300003323 Bacteria 12697
4 rootH1_10012577 3300003316 Bacteria 3264
5 rootH1_10012577 3300003323 Bacteria 30555
6 Ga0006562J51391_1145388 3300003578 Bacteria 9682
7 Ga0006562J51391_1145389 3300003578 Bacteria 9590
8 Ga0070658_10017599 3300005327 Bacteria 5716
9 Ga0070658_10177200 3300005327 Bacteria 1793
10 Ga0070658_10301417 3300005327 Bacteria 1366
11 Ga0070670_100004010 3300005331 Bacteria 12288
12 Ga0068869_100180952 3300005334 Bacteria 1652
13 Ga0070666_10038880 3300005335 Bacteria 3167
14 Ga0070682_100012287 3300005337 Bacteria 4905
15 Ga0068868_100042748 3300005338 Bacteria 3538
16 Ga0070691_10079020 3300005341 Bacteria 1607
17 Ga0070687_100037736 3300005343 Bacteria 2417
18 Ga0070661_100083779 3300005344 Bacteria 2356
19 Ga0070692_10050693 3300005345 Bacteria 2156
20 Ga0070671_100003479 3300005355 Bacteria 12287
21 Ga0070674_100135003 3300005356 Bacteria 1844
22 Ga0070673_100096688 3300005364 Bacteria 2424
23 Ga0070667_100029353 3300005367 Bacteria 4581
24 Ga0070700_100204595 3300005441 Bacteria 1389
25 Ga0070694_100024607 3300005444 Bacteria 3888
26 Ga0070684_100103309 3300005535 Bacteria 2549
27 Ga0070686_100009721 3300005544 Bacteria 5405
28 Ga0070693_100199902 3300005547 Bacteria 1297
29 Ga0070665_100001489 3300005548 Bacteria 27335
30 Ga0070665_100008355 3300005548 Bacteria 10474
31 Ga0070664_100006406 3300005564 Bacteria 9494
32 Ga0068852_100108565 3300005616 Bacteria 2519
33 Ga0068859_100023687 3300005617 Bacteria 6162
34 Ga0068864_100058437 3300005618 Bacteria 3333
35 Ga0068864_100243357 3300005618 Bacteria 1667
36 Ga0068861_100080299 3300005719 Bacteria 2551
37 Ga0068863_100002383 3300005841 Bacteria 18687
38 Ga0068858_100000800 3300005842 Bacteria 32935
39 Ga0068860_100010915 3300005843 Bacteria 8957
40 Ga0068860_100049633 3300005843 Bacteria 3996
41 Ga0068862_100049302 3300005844 Bacteria 3596
42 Ga0068862_100273152 3300005844 Bacteria 1547
43 Ga0068862_100299946 3300005844 Bacteria 1478
44 Ga0081455_10001007 3300005937 Bacteria 35710
45 Ga0081539_10000007 3300005985 Bacteria 532790
46 Ga0075363_100051992 3300006048 Bacteria 2186
47 Ga0075364_10133271 3300006051 Bacteria 1668
48 Ga0097621_100036814 3300006237 Bacteria 3916
49 Ga0068871_100056854 3300006358 Bacteria 3182
50 Ga0075428_100000322 3300006844 Bacteria 47435
51 Ga0075431_100001355 3300006847 Bacteria 22435
52 Ga0075429_100045034 3300006880 Bacteria 3838
53 Ga0097620_100023687 3300006931 Bacteria 6162
54 Ga0105240_10505714 3300009093 Bacteria 1343
55 Ga0111539_10003103 3300009094 Bacteria 22015
56 Ga0105245_10001549 3300009098 Bacteria 20852
57 Ga0105245_10443079 3300009098 Bacteria 1306
58 Ga0114129_10489843 3300009147 Bacteria 1607
59 Ga0105243_10001003 3300009148 Bacteria 26105
60 Ga0105241_10198482 3300009174 Bacteria 1674
61 Ga0105238_10005457 3300009551 Bacteria 12563
62 Ga0105239_10019719 3300010375 Bacteria 7443
63 Ga0105246_10018077 3300011119 Bacteria 4491
64 Ga0157374_10091433 3300013296 Bacteria 2902
65 Ga0163162_10003943 3300013306 Bacteria 14233
66 Ga0157375_10023519 3300013308 Bacteria 5687
67 Ga0157380_10076728 3300014326 Bacteria 2721
68 Ga0157379_10067503 3300014968 Bacteria 3196
69 Ga0157376_10053890 3300014969 Bacteria 3351
70 Ga0206350_10218756 3300020080 Eukaryota 1567
71 Ga0206350_10475103 3300020080 Bacteria 1116
72 Ga0209233_1004075 3300025261 Bacteria 5043
73 Ga0207655_1019827 3300025728 Bacteria 3491
74 Ga0207680_10008338 3300025903 Bacteria 5080
75 Ga0207662_10010497 3300025918 Bacteria 5117
76 Ga0207662_10194359 3300025918 Bacteria 1310
77 Ga0207650_10089277 3300025925 Bacteria 2352
78 Ga0207687_10085618 3300025927 Bacteria 2287
79 Ga0207700_10473432 3300025928 Bacteria 1106
80 Ga0207664_10002497 3300025929 Bacteria 12179
81 Ga0207644_10033833 3300025931 Bacteria 3574
82 Ga0207709_10001274 3300025935 Bacteria 18018
83 Ga0207709_10019465 3300025935 Bacteria 3817
84 Ga0207711_10002225 3300025941 Bacteria 17415
85 Ga0207689_10143754 3300025942 Bacteria 1965
86 Ga0207661_10111778 3300025944 Bacteria 2312
87 Ga0207679_10115905 3300025945 Bacteria 2123
88 Ga0207712_10013733 3300025961 Bacteria 5194
89 Ga0207712_10125005 3300025961 Bacteria 1952
90 Ga0207712_10317110 3300025961 Bacteria 1285
91 Ga0207677_10028345 3300026023 Bacteria 3539
92 Ga0207703_10022216 3300026035 Bacteria 4974
93 Ga0207708_10029575 3300026075 Bacteria 4152
94 Ga0207641_10151802 3300026088 Bacteria 2098
95 Ga0207676_10041016 3300026095 Bacteria 3550
96 Ga0207675_100001675 3300026118 Bacteria 22182
97 Ga0207675_100229719 3300026118 Bacteria 1790
98 Ga0210000_1008523 3300027462 Bacteria 1504
99 Ga0209966_1001630 3300027695 Bacteria 3836
100 Ga0207428_10077949 3300027907 Bacteria 2594
101 Ga0268266_10027712 3300028379 Bacteria 4817
102 Ga0268265_10136979 3300028380 Bacteria 2044
103 Ga0268265_10146610 3300028380 Bacteria 1984
104 Ga0268265_10189749 3300028380 Bacteria 1773
105 Ga0268264_10147847 3300028381 Bacteria 2103
106 Ga0265319_1000816 3300028563 Bacteria 19901
107 Ga0265334_10000036 3300028573 Bacteria 104422
108 Ga0265323_10004987 3300028653 Bacteria 5668
109 Ga0265336_10002101 3300028666 Bacteria 8467
110 Ga0265338_10000149 3300028800 Bacteria 127027
111 Ga0265324_10000008 3300029957 Bacteria 259947
112 Ga0265324_10000433 3300029957 Bacteria 29760
113 Ga0265330_10027378 3300031235 Bacteria 2575
114 Ga0265320_10070106 3300031240 Bacteria 1654
115 Ga0265325_10000156 3300031241 Bacteria 47892
116 Ga0265325_10003119 3300031241 Bacteria 10931
117 Ga0265325_10013478 3300031241 Bacteria 4654
118 Ga0265339_10000964 3300031249 Bacteria 22044
119 Ga0265331_10010204 3300031250 Bacteria 5209
120 Ga0265327_10000014 3300031251 Bacteria 506288
121 Ga0265316_10018577 3300031344 Bacteria 5971
122 Ga0265316_10037782 3300031344 Bacteria 3894
123 Ga0307408_100000858 3300031548 Bacteria 23923
124 Ga0307408_100003685 3300031548 Bacteria 10443
125 Ga0307408_100376067 3300031548 Bacteria 1213
126 Ga0265313_10001213 3300031595 Bacteria 24627
127 Ga0265313_10001631 3300031595 Bacteria 20832
128 Ga0316575_10000910 3300031665 Bacteria 9077
129 Ga0316575_10050280 3300031665 Bacteria 1659
130 Ga0316575_10121408 3300031665 Bacteria 1069
131 Ga0265314_10000136 3300031711 Bacteria 109906
132 Ga0265314_10033417 3300031711 Bacteria 3772
133 Ga0316576_10114864 3300031727 Bacteria 2019
134 Ga0307413_10044997 3300031824 Bacteria 2613
135 Ga0307413_10146417 3300031824 Bacteria 1640
136 Ga0307406_10000731 3300031901 Bacteria 18475
137 Ga0373948_0005388 3300034817 Bacteria 2073
138 Ga0373928_0034168 3300035084 Bacteria 1140
139 Ga0373929_0004014 3300035085 Bacteria 2636
140 Ga0373932_0000349 3300035112 Bacteria 14175
141 Ga0373932_0019824 3300035112 Bacteria 1757
142 Ga0373953_0060135 3300035117 Bacteria 1552
143 Ga0373955_0029124 3300035172 Bacteria 2869
144 Ga0316574_0016116 3300035398 Bacteria 4348
145 Ga0316574_0063393 3300035398 Bacteria 2324
146 Ga0316574_0110401 3300035398 Bacteria 1763
147 Ga0316574_0174037 3300035398 Bacteria 1386
148 Ga0373931_0000003 3300035691 Bacteria 560286
149 Ga0373931_0000049 3300035691 Bacteria 63064
150 Ga0373927_0000001 3300035695 Bacteria 1082160
151 Ga0373933_0040279 3300035724 Bacteria 2752
152 Ga0373933_0042999 3300035724 Bacteria 2671
153 Ga0373937_0012416 3300036401 Bacteria 7491
154 Ga0316584_0283460 3300036712 Bacteria 1203
155 Ga0316584_0299663 3300036712 Bacteria 1164
156 Ga0395900_0008651 3300037418 Bacteria 10456
157 Ga0395898_0370643 3300037466 Bacteria 1365
158 Ga0400484_23199 3300038725 Bacteria 26008
159 Ga0400490_12946 3300038726 Bacteria 3270
160 Ga0400490_55447 3300038726 Bacteria 66989
161 Ga0400491_15211 3300038727 Bacteria 8069
162 Ga0400488_08344 3300038741 Bacteria 1994
163 Ga0400486_15825 3300038742 Bacteria 110284
164 Ga0400483_025556 3300039062 Bacteria 3111
165 Ga0400483_057505 3300039062 Bacteria 4857
166 Ga0400483_070245 3300039062 Bacteria 1401
167 Ga0400483_089094 3300039062 Bacteria 3656
168 Ga0400483_173869 3300039062 Bacteria 4043
169 Ga0400483_224695 3300039062 Bacteria 10741
170 Ga0400483_235533 3300039062 Bacteria 14952
171 Ga0400489_56212 3300039093 Bacteria 13464
172 Ga0451793_0125705 3300041452 Bacteria 1129
173 Ga0451853_2804991 3300041512 Bacteria 2959
174 Ga0451577_0271015 3300042876 Bacteria 1537
175 Ga0466961_0001131 3300044693 Bacteria 16351
176 Ga0466964_0210129 3300044706 Bacteria 939
177 Ga0453684_0002229 3300044712 Bacteria 48077
178 Ga0453684_0015522 3300044712 Bacteria 12031
179 Ga0453684_0160262 3300044712 Bacteria 2662
180 Ga0466960_0012177 3300044901 Bacteria 3622
181 Ga0451576_0014439 3300045051 Bacteria 8788
182 Ga0451576_0030012 3300045051 Bacteria 5814
183 Ga0451576_0515688 3300045051 Bacteria 1256
184 Ga0466967_0359263 3300045976 Bacteria 1411
185 Ga0495628_0231584 3300046516 Bacteria 1385
186 Ga0495630_0033406 3300046517 Bacteria 3837
187 Ga0495680_0011956 3300047322 Bacteria 7661
188 Ga0496105_0072325 3300048908 Bacteria 2850
189 Ga0496109_0014347 3300048912 Bacteria 6894
190 Ga0496111_0053011 3300048914 Bacteria 2930
191 Ga0496111_0106256 3300048914 Bacteria 2066
192 Ga0496112_0022402 3300048915 Bacteria 6021
193 Ga0496112_0704159 3300048915 Bacteria 938
194 Ga0496113_0094975 3300048916 Bacteria 2304
195 Ga0496113_0109664 3300048916 Bacteria 2147
196 Ga0496114_0023249 3300048917 Bacteria 5057
197 Ga0496116_0013351 3300048919 Bacteria 6629
198 Ga0496117_0085366 3300048920 Bacteria 2055
199 Ga0496118_0016823 3300048921 Bacteria 6684
200 Ga0496120_0000891 3300048923 Bacteria 41990
201 Ga0496122_0000111 3300048925 Bacteria 189920
202 Ga0496123_0000006 3300048926 Bacteria 647258
203 Ga0496124_0006390 3300048927 Bacteria 12848
204 Ga0496125_0005500 3300048928 Bacteria 14051
205 Ga0496126_0017616 3300048929 Bacteria 7116
206 Ga0501031_0158009 3300049568 Bacteria 1482
207 Ga0501032_0025345 3300049569 Bacteria 4089
208 Ga0501033_0000740 3300049570 Bacteria 29988
209 Ga0501034_0085832 3300049571 Bacteria 3149
210 Ga0501034_0088427 3300049571 Bacteria 3096
211 Ga0501036_0020593 3300049572 Bacteria 5540
212 Ga0501036_0411240 3300049572 Bacteria 1128
213 Ga0501040_0000035 3300049576 Bacteria 62891
214 Ga0501040_0113224 3300049576 Bacteria 1898
215 Ga0501040_0338247 3300049576 Bacteria 1077
216 Ga0501042_0024779 3300049578 Bacteria 4210
217 Ga0501047_0004628 3300049581 Bacteria 12950
218 Ga0501047_0039890 3300049581 Bacteria 4542
219 Ga0501069_0040724 3300049585 Bacteria 2568
220 Ga0501069_0148470 3300049585 Bacteria 1346
221 Ga0501071_0117955 3300049587 Bacteria 1966
222 Ga0501075_0192905 3300049591 Bacteria 1554
223 Ga0501075_0213934 3300049591 Bacteria 1470
224 Ga0501076_0059152 3300049592 Bacteria 3048
225 Ga0501077_0059936 3300049593 Bacteria 2416
226 Ga0501079_0011181 3300049741 Bacteria 6847
227 Ga0501079_0347405 3300049741 Bacteria 1162
228 Ga0501080_0051973 3300049742 Bacteria 3814
229 Ga0501080_0076131 3300049742 Bacteria 3121
230 Ga0501081_0142826 3300049743 Bacteria 1716
231 Ga0501035_0087841 3300049822 Bacteria 2740
232 Ga0501044_0001045 3300049823 Bacteria 33277
233 Ga0501044_0080805 3300049823 Bacteria 3292
234 Ga0501045_0006138 3300049824 Bacteria 8326
235 Ga0501045_0059072 3300049824 Bacteria 2809
236 nmdc:mga00v17_199155_c1 3300050491 Bacteria 1294
237 nmdc:mga0yw44_44481_c1 3300050492 Bacteria 2656
238 nmdc:mga05p37_109376_c1 3300050507 Bacteria 3400
239 nmdc:mga09592_2685_c1 3300050508 Bacteria 14392
240 nmdc:mga09592_51831_c1 3300050508 Bacteria 3462
241 nmdc:mga0qj67_659_c1 3300050509 Bacteria 23687
242 nmdc:mga06r32_15483_c1 3300050510 Bacteria 6923
243 nmdc:mga06r32_66951_c1 3300050510 Bacteria 3467
244 nmdc:mga08y16_27800_c1 3300050511 Bacteria 5961
245 nmdc:mga0rr50_132271_c1 3300050513 Bacteria 1999
246 Ga0495601_0079865 3300053077 Bacteria 2098
247 Ga0500566_0000115 3300053094 Bacteria 41424
248 Ga0500641_0004343 3300053096 Bacteria 5002
249 Ga0500555_000003 3300053103 Bacteria 392994
250 Ga0500568_0039756 3300053139 Bacteria 1897
251 Ga0500589_140332 3300053147 Bacteria 997
252 Ga0500616_0002445 3300053153 Bacteria 15432
253 Ga0500616_0004641 3300053153 Bacteria 9698
254 Ga0500616_0031523 3300053153 Bacteria 2903
255 Ga0501084_0058851 3300054114 Bacteria 3216
256 Ga0501082_0035340 3300060353 Bacteria 4307
257 Ga0501082_0481343 3300060353 Bacteria 1085
258 Ga0530510_0011988 3300061734 Bacteria 6081
259 2588107719 2585428157 Bacteria 3018951
260 2738715875 2738541276 Bacteria 4690596
261 2809225625 2808606447 Bacteria 3572005
262 2852635527 2852632344 Bacteria 3463163
263 2932398602 2932398195 Bacteria 3847976
264 2984583195 2984580707 Bacteria 3351387
265 Ga0501038_0123998
266 JGI25406J46586_10006385
267 rootH1_10005612
268 rootH1_10012577
269 Ga0006562J51391_1145388
270 Ga0006562J51391_1145389
271 Ga0070658_10017599
272 Ga0070658_10177200
273 Ga0070658_10301417
274 Ga0070670_100004010
275 Ga0068869_100180952
276 Ga0070666_10038880
277 Ga0070682_100012287
278 Ga0068868_100042748
279 Ga0070691_10079020
280 Ga0070687_100037736
281 Ga0070661_100083779
282 Ga0070692_10050693
283 Ga0070671_100003479
284 Ga0070674_100135003
285 Ga0070673_100096688
286 Ga0070667_100029353
287 Ga0070700_100204595
288 Ga0070694_100024607
289 Ga0070684_100103309
290 Ga0070686_100009721
291 Ga0070693_100199902
292 Ga0070665_100001489
293 Ga0070665_100008355
294 Ga0070664_100006406
295 Ga0068852_100108565
296 Ga0068859_100023687
297 Ga0068864_100058437
298 Ga0068864_100243357
299 Ga0068861_100080299
300 Ga0068863_100002383
301 Ga0068858_100000800
302 Ga0068860_100010915
303 Ga0068860_100049633
304 Ga0068862_100049302
305 Ga0068862_100273152
306 Ga0068862_100299946
307 Ga0081455_10001007
308 Ga0081539_10000007
309 Ga0075363_100051992
310 Ga0075364_10133271
311 Ga0097621_100036814
312 Ga0068871_100056854
313 Ga0075428_100000322
314 Ga0075431_100001355
315 Ga0075429_100045034
316 Ga0097620_100023687
317 Ga0105240_10505714
318 Ga0111539_10003103
319 Ga0105245_10001549
320 Ga0105245_10443079
321 Ga0114129_10489843
322 Ga0105243_10001003
323 Ga0105241_10198482
324 Ga0105238_10005457
325 Ga0105239_10019719
326 Ga0105246_10018077
327 Ga0157374_10091433
328 Ga0163162_10003943
329 Ga0157375_10023519
330 Ga0157380_10076728
331 Ga0157379_10067503
332 Ga0157376_10053890
333 Ga0206350_10218756
334 Ga0206350_10475103
335 Ga0209233_1004075
336 Ga0207655_1019827
337 Ga0207680_10008338
338 Ga0207662_10010497
339 Ga0207662_10194359
340 Ga0207650_10089277
341 Ga0207687_10085618
342 Ga0207700_10473432
343 Ga0207664_10002497
344 Ga0207644_10033833
345 Ga0207709_10001274
346 Ga0207709_10019465
347 Ga0207711_10002225
348 Ga0207689_10143754
349 Ga0207661_10111778
350 Ga0207679_10115905
351 Ga0207712_10013733
352 Ga0207712_10125005
353 Ga0207712_10317110
354 Ga0207677_10028345
355 Ga0207703_10022216
356 Ga0207708_10029575
357 Ga0207641_10151802
358 Ga0207676_10041016
359 Ga0207675_100001675
360 Ga0207675_100229719
361 Ga0210000_1008523
362 Ga0209966_1001630
363 Ga0207428_10077949
364 Ga0268266_10027712
365 Ga0268265_10136979
366 Ga0268265_10146610
367 Ga0268265_10189749
368 Ga0268264_10147847
369 Ga0265319_1000816
370 Ga0265334_10000036
371 Ga0265323_10004987
372 Ga0265336_10002101
373 Ga0265338_10000149
374 Ga0265324_10000008
375 Ga0265324_10000433
376 Ga0265330_10027378
377 Ga0265320_10070106
378 Ga0265325_10000156
379 Ga0265325_10003119
380 Ga0265325_10013478
381 Ga0265339_10000964
382 Ga0265331_10010204
383 Ga0265327_10000014
384 Ga0265316_10018577
385 Ga0265316_10037782
386 Ga0307408_100000858
387 Ga0307408_100003685
388 Ga0307408_100376067
389 Ga0265313_10001213
390 Ga0265313_10001631
391 Ga0316575_10000910
392 Ga0316575_10050280
393 Ga0316575_10121408
394 Ga0265314_10000136
395 Ga0265314_10033417
396 Ga0316576_10114864
397 Ga0307413_10044997
398 Ga0307413_10146417
399 Ga0307406_10000731
400 Ga0373948_0005388
401 Ga0373928_0034168
402 Ga0373929_0004014
403 Ga0373932_0000349
404 Ga0373932_0019824
405 Ga0373953_0060135
406 Ga0373955_0029124
407 Ga0316574_0016116
408 Ga0316574_0063393
409 Ga0316574_0110401
410 Ga0316574_0174037
411 Ga0373931_0000003
412 Ga0373931_0000049
413 Ga0373927_0000001
414 Ga0373933_0040279
415 Ga0373933_0042999
416 Ga0373937_0012416
417 Ga0316584_0283460
418 Ga0316584_0299663
419 Ga0395900_0008651
420 Ga0395898_0370643
421 Ga0400484_23199
422 Ga0400490_12946
423 Ga0400490_55447
424 Ga0400491_15211
425 Ga0400488_08344
426 Ga0400486_15825
427 Ga0400483_025556
428 Ga0400483_057505
429 Ga0400483_070245
430 Ga0400483_089094
431 Ga0400483_173869
432 Ga0400483_224695
433 Ga0400483_235533
434 Ga0400489_56212
435 Ga0451793_0125705
436 Ga0451853_2804991
437 Ga0451577_0271015
438 Ga0466961_0001131
439 Ga0466964_0210129
440 Ga0453684_0002229
441 Ga0453684_0015522
442 Ga0453684_0160262
443 Ga0466960_0012177
444 Ga0451576_0014439
445 Ga0451576_0030012
446 Ga0451576_0515688
447 Ga0466967_0359263
448 Ga0495628_0231584
449 Ga0495630_0033406
450 Ga0495680_0011956
451 Ga0496105_0072325
452 Ga0496109_0014347
453 Ga0496111_0053011
454 Ga0496111_0106256
455 Ga0496112_0022402
456 Ga0496112_0704159
457 Ga0496113_0094975
458 Ga0496113_0109664
459 Ga0496114_0023249
460 Ga0496116_0013351
461 Ga0496117_0085366
462 Ga0496118_0016823
463 Ga0496120_0000891
464 Ga0496122_0000111
465 Ga0496123_0000006
466 Ga0496124_0006390
467 Ga0496125_0005500
468 Ga0496126_0017616
469 Ga0501031_0158009
470 Ga0501032_0025345
471 Ga0501033_0000740
472 Ga0501034_0085832
473 Ga0501034_0088427
474 Ga0501036_0020593
475 Ga0501036_0411240
476 Ga0501040_0000035
477 Ga0501040_0113224
478 Ga0501040_0338247
479 Ga0501042_0024779
480 Ga0501047_0004628
481 Ga0501047_0039890
482 Ga0501069_0040724
483 Ga0501069_0148470
484 Ga0501071_0117955
485 Ga0501075_0192905
486 Ga0501075_0213934
487 Ga0501076_0059152
488 Ga0501077_0059936
489 Ga0501079_0011181
490 Ga0501079_0347405
491 Ga0501080_0051973
492 Ga0501080_0076131
493 Ga0501081_0142826
494 Ga0501035_0087841
495 Ga0501044_0001045
496 Ga0501044_0080805
497 Ga0501045_0006138
498 Ga0501045_0059072
499 nmdc:mga00v17_199155_c1
500 nmdc:mga0yw44_44481_c1
501 nmdc:mga05p37_109376_c1
502 nmdc:mga09592_2685_c1
503 nmdc:mga09592_51831_c1
504 nmdc:mga0qj67_659_c1
505 nmdc:mga06r32_15483_c1
506 nmdc:mga06r32_66951_c1
507 nmdc:mga08y16_27800_c1
508 nmdc:mga0rr50_132271_c1
509 Ga0495601_0079865
510 Ga0500566_0000115
511 Ga0500641_0004343
512 Ga0500555_000003
513 Ga0500568_0039756
514 Ga0500589_140332
515 Ga0500616_0002445
516 Ga0500616_0004641
517 Ga0500616_0031523
518 Ga0501084_0058851
519 Ga0501082_0035340
520 Ga0501082_0481343
521 Ga0530510_0011988
522 2588107719
523 2738715875
524 2809225625
525 2852635527
526 2932398602
527 2984583195

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00056

Ldh_1_N

lactate/malate dehydrogenase, NAD binding domain

39

187

0.96

PF02866

Ldh_1_C

lactate/malate dehydrogenase, alpha/beta C-terminal domain

190

351

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
1wzi-assembly1.cif.gz_A structural basis for alteration of cofactor specificity of malate dehydrogenase from thermus flavus 0.9788 1 317
2cvq-assembly1.cif.gz_B crystal structure of nad(h)-dependent malate dehydrogenase complexed with nadph 0.9786 1 317
1bmd-assembly1.cif.gz_B determinants of protein thermostability observed in the 1.9 angstroms crystal structure of malate dehydrogenase from the thermophilic bacterium thermus flavus 0.9783 1 317
1bdm-assembly1.cif.gz_B the structure at 1.8 angstroms resolution of a single site mutant (t189i) of malate dehydrogenase from thermus flavus with increased enzymatic activity 0.9781 1 317
3d5t-assembly2.cif.gz_C crystal structure of malate dehydrogenase from burkholderia pseudomallei 0.9751 2 316
ID Description Score Start End Superfamily
7mdhC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9781 2 151 3.40.50.720
4uuoA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9722 3 156 3.40.50.720
af_Q4D123_7_158_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9665 5 156 3.40.50.720
4uuoA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.966 3 156 3.40.50.720
af_A0A1D6HWW8_53_199_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9596 11 155 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A382N203-F1-model_v4 Lactate/malate dehydrogenase N-terminal domain-containing protein 1.001 3 88 GO:0006108
GO:0016615
AF-A0A7K2EB87-F1-model_v4 Malate dehydrogenase (EC 1.1.1.37) 1.001 3 78 GO:0006108
GO:0030060
AF-A0A534FPK5-F1-model_v4 Malate dehydrogenase (EC 1.1.1.37) 1 1 71 GO:0006108
GO:0030060
AF-A0A536LAS9-F1-model_v4 Malate dehydrogenase (EC 1.1.1.37) 1 2 71 GO:0006108
GO:0030060
AF-A0A0C1ECQ5-F1-model_v4 Lactate/malate dehydrogenase N-terminal domain-containing protein 0.9987 2 73 GO:0006108
GO:0016615

Map