F371951

General Info

Members Datasets Scaffolds Average Seq Length
263 155 526 440

Family's Representative Sequence

Representative Sequence 3300028558|Ga0265326_10003076|Ga0265326_100030763
Length 496
Sequence MTGPSRGGSGTLLMPRHGRSLRDSDGEEVTPLLRHLIEAAEAASRFQATGEVVRVVGTTVEAAGLILQLGSICWIDLEPEGMVSAEVVGFKDGLITLVPFGDLSGVRPGSAVRLREQQFRVPIGPAVLGRVLDGFGRPIDGQGPLRAEYRVVTGAAPHPLGRARISTPISTGVRSLDGLLSAGKGQRLGIFAGSGVGKSTLLAMIARHASSNVNVIALIGERGREVQEFIDEQLGPQGLARSCVVVATSDQPALLRLKAAEIATAIAESFRDEGKDVLFMMDSVTRLAMAQREIGLGAGEPPALRGYPPSVFSFLPRLLERAGNNEYGTITGFFTVLVEGDDMTEPVADTVRSILDGHIVLSRALAERNHYPAVDVLASVSRAMPAVVDKDHLRVAGAMRAALAEYEGARDLIEVGAYSHGSNPAIDEAIALRPALEAFLCQELEDQSDIVSARRMMESTGVLEARALLGPGAGLATARPADQPSAAALLRGGAPR

Samples

Sample ID Description Type Environment
1 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
21 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
29 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
30 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
31 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
32 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
33 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
34 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
35 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
37 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
38 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
39 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
40 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
41 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
42 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
43 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
44 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
45 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
46 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
47 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
48 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
49 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
50 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
51 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
52 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
77 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
78 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
79 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
80 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
81 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
82 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
83 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
84 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
85 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
86 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
87 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
88 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
89 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
90 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
91 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
92 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
93 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
94 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
95 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
96 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
97 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
98 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
99 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
100 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
101 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
102 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
103 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
104 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
105 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
106 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
107 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
108 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
109 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
110 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
111 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
112 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
113 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
114 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
115 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
116 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
117 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
118 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
119 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
120 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
121 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
133 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
134 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
135 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
136 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
137 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
138 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
139 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
140 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
141 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
142 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
143 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
146 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
147 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
148 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
149 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
150 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
151 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
152 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
153 2821443989 Inquilinus ginsengisoli 584 Isolate Unclassified
154 2844533157 Inquilinus sp. R-72501 v. 2 Isolate Unclassified
155 8055909800 Plastoroseomonas hellenica LMG 31523 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.86
Metatranscriptomes 0
Isolates 1.14

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.52
Nodule 0
Rhizoplane 1.14
Rhizosphere 87.45
Stem 0
Stem Tuber 0
Unclassified 4.94

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265326_10003076 3300028558 Bacteria 5534
2 SwRhRL2b_contig_3590747 2162886007 Bacteria 13013
3 JGI25151J46595_10000599 3300003187 Bacteria 31981
4 Ga0065704_10000671 3300005289 Bacteria 26329
5 Ga0065707_10082012 3300005295 Bacteria 24840
6 Ga0070658_10054271 3300005327 Bacteria 3254
7 Ga0070683_100006324 3300005329 Bacteria 9935
8 Ga0068869_100071987 3300005334 Bacteria 2561
9 Ga0070680_100123596 3300005336 Bacteria 2161
10 Ga0070660_100082338 3300005339 Bacteria 2527
11 Ga0070661_100102933 3300005344 Bacteria 2126
12 Ga0070674_100091361 3300005356 Bacteria 2198
13 Ga0070659_100070931 3300005366 Unclassified 2769
14 Ga0070709_10019608 3300005434 Bacteria 3913
15 Ga0070709_10022426 3300005434 Bacteria 3693
16 Ga0070714_100005068 3300005435 Bacteria 10025
17 Ga0070714_100035098 3300005435 Bacteria 4201
18 Ga0070714_100050800 3300005435 Bacteria 3534
19 Ga0070714_100066561 3300005435 Bacteria 3105
20 Ga0070713_100000505 3300005436 Bacteria 24968
21 Ga0070713_100034223 3300005436 Bacteria 4079
22 Ga0070713_100167257 3300005436 Bacteria 1967
23 Ga0070711_100002480 3300005439 Bacteria 10537
24 Ga0070711_100022028 3300005439 Bacteria 4126
25 Ga0070708_100046880 3300005445 Bacteria 3816
26 Ga0070681_10003453 3300005458 Bacteria 14800
27 Ga0070681_10054203 3300005458 Bacteria 3995
28 Ga0070707_100002171 3300005468 Bacteria 18783
29 Ga0070699_100010406 3300005518 Bacteria 8049
30 Ga0068853_100004105 3300005539 Bacteria 11218
31 Ga0068853_100006869 3300005539 Bacteria 9079
32 Ga0070665_100000533 3300005548 Bacteria 53800
33 Ga0070665_100006219 3300005548 Bacteria 12217
34 Ga0068855_100071867 3300005563 Bacteria 4022
35 Ga0070664_100067590 3300005564 Bacteria 3054
36 Ga0070664_100144246 3300005564 Bacteria 2099
37 Ga0068857_100027543 3300005577 Bacteria 5013
38 Ga0068856_100013858 3300005614 Bacteria 7797
39 Ga0068856_100106172 3300005614 Bacteria 2803
40 Ga0081539_10005181 3300005985 Bacteria 13542
41 Ga0070717_10011661 3300006028 Bacteria 6682
42 Ga0070717_10015617 3300006028 Bacteria 5868
43 Ga0070717_10073197 3300006028 Bacteria 2863
44 Ga0070717_10080457 3300006028 Bacteria 2734
45 Ga0075428_100027988 3300006844 Bacteria 6236
46 Ga0075428_100248403 3300006844 Bacteria 1918
47 Ga0075430_100048565 3300006846 Bacteria 3583
48 Ga0075430_100071262 3300006846 Bacteria 2915
49 Ga0075429_100080729 3300006880 Bacteria 2836
50 Ga0075429_100089135 3300006880 Bacteria 2689
51 Ga0075436_100000706 3300006914 Bacteria 22104
52 Ga0075436_100036898 3300006914 Bacteria 3374
53 Ga0075436_100055052 3300006914 Bacteria 2746
54 Ga0105240_10005171 3300009093 Bacteria 19512
55 Ga0105240_10090228 3300009093 Bacteria 3746
56 Ga0105240_10168028 3300009093 Bacteria 2600
57 Ga0105240_10223184 3300009093 Bacteria 2194
58 Ga0105240_10506811 3300009093 Bacteria 1341
59 Ga0111539_10006500 3300009094 Bacteria 15057
60 Ga0111539_10201328 3300009094 Bacteria 2322
61 Ga0105241_10110592 3300009174 Bacteria 2198
62 Ga0105248_10085593 3300009177 Bacteria 3547
63 Ga0105237_10056931 3300009545 Bacteria 3913
64 Ga0105238_10000036 3300009551 Bacteria 165343
65 Ga0105238_10199775 3300009551 Bacteria 1975
66 Ga0157370_10113046 3300013104 Bacteria 2538
67 Ga0157369_10034073 3300013105 Bacteria 5591
68 Ga0157369_10063198 3300013105 Bacteria 3989
69 Ga0157369_10098848 3300013105 Bacteria 3111
70 Ga0157374_10017134 3300013296 Bacteria 6377
71 Ga0157374_10101389 3300013296 Bacteria 2760
72 Ga0157378_10108489 3300013297 Unclassified 2542
73 Ga0157372_10080694 3300013307 Bacteria 3682
74 Ga0157372_10288559 3300013307 Bacteria 1908
75 Ga0163163_10025566 3300014325 Bacteria 5629
76 Ga0213872_10001957 3300021361 Bacteria 12563
77 Ga0213874_10017127 3300021377 Unclassified 1939
78 Ga0213875_10000090 3300021388 Bacteria 105400
79 Ga0213875_10032176 3300021388 Bacteria 2479
80 Ga0209130_1001961 3300025284 Bacteria 11355
81 Ga0209025_1000270 3300025294 Bacteria 120921
82 Ga0207426_1000453 3300025302 Bacteria 65068
83 Ga0207699_10040703 3300025906 Bacteria 2679
84 Ga0207705_10035074 3300025909 Bacteria 3589
85 Ga0207705_10048095 3300025909 Bacteria 3068
86 Ga0207707_10007528 3300025912 Bacteria 9488
87 Ga0207695_10001052 3300025913 Bacteria 48444
88 Ga0207695_10115133 3300025913 Bacteria 2663
89 Ga0207671_10038085 3300025914 Bacteria 3564
90 Ga0207693_10061885 3300025915 Bacteria 2932
91 Ga0207663_10047370 3300025916 Bacteria 2654
92 Ga0207660_10023262 3300025917 Bacteria 4183
93 Ga0207657_10007153 3300025919 Bacteria 11463
94 Ga0207646_10000175 3300025922 Bacteria 86807
95 Ga0207694_10002708 3300025924 Bacteria 14345
96 Ga0207700_10000635 3300025928 Bacteria 20560
97 Ga0207700_10023985 3300025928 Bacteria 4217
98 Ga0207664_10028675 3300025929 Bacteria 4233
99 Ga0207664_10049214 3300025929 Bacteria 3317
100 Ga0207664_10094061 3300025929 Bacteria 2463
101 Ga0207691_10016243 3300025940 Bacteria 7067
102 Ga0207691_10277960 3300025940 Bacteria 1441
103 Ga0207689_10095466 3300025942 Bacteria 2442
104 Ga0207661_10035483 3300025944 Bacteria 3886
105 Ga0207679_10002469 3300025945 Bacteria 11387
106 Ga0207679_10112225 3300025945 Bacteria 2154
107 Ga0207651_10202482 3300025960 Bacteria 1592
108 Ga0207658_10012749 3300025986 Bacteria 5740
109 Ga0207703_10178112 3300026035 Bacteria 1875
110 Ga0207639_10005624 3300026041 Bacteria 8482
111 Ga0207639_10008601 3300026041 Bacteria 7004
112 Ga0207702_10130923 3300026078 Bacteria 2257
113 Ga0207674_10002048 3300026116 Bacteria 25577
114 Ga0268266_10016518 3300028379 Bacteria 6309
115 Ga0268266_10017166 3300028379 Bacteria 6180
116 Ga0265334_10017036 3300028573 Bacteria 3006
117 Ga0265323_10051662 3300028653 Bacteria 1457
118 Ga0265338_10212412 3300028800 Unclassified 1451
119 Ga0265325_10004765 3300031241 Bacteria 8501
120 Ga0265325_10023856 3300031241 Bacteria 3334
121 Ga0265325_10044535 3300031241 Bacteria 2311
122 Ga0265325_10055338 3300031241 Bacteria 2029
123 Ga0265316_10014104 3300031344 Bacteria 7051
124 Ga0307509_10258972 3300031507 Bacteria 1517
125 Ga0265313_10007947 3300031595 Bacteria 7126
126 Ga0265313_10045164 3300031595 Bacteria 2146
127 Ga0307508_10176364 3300031616 Bacteria 1741
128 Ga0307410_10049596 3300031852 Bacteria 2819
129 Ga0373923_0012246 3300035111 Bacteria 3164
130 Ga0373923_0014091 3300035111 Bacteria 2996
131 Ga0373953_0044713 3300035117 Bacteria 1772
132 Ga0373935_0026625 3300035692 Bacteria 3571
133 Ga0373935_0153180 3300035692 Bacteria 1566
134 Ga0373927_0002530 3300035695 Bacteria 13332
135 Ga0373927_0006074 3300035695 Bacteria 8267
136 Ga0373927_0020065 3300035695 Bacteria 4384
137 Ga0373927_0088450 3300035695 Bacteria 2011
138 Ga0373933_0040282 3300035724 Bacteria 2752
139 Ga0373947_0030466 3300035725 Bacteria 3170
140 Ga0373947_0113237 3300035725 Bacteria 1717
141 Ga0373937_0020135 3300036401 Bacteria 5978
142 Ga0373937_0027699 3300036401 Bacteria 5127
143 Ga0373937_0042551 3300036401 Bacteria 4144
144 Ga0373925_0076871 3300037068 Bacteria 2533
145 Ga0373925_0170490 3300037068 Bacteria 1718
146 Ga0436364_0044130 3300037853 Bacteria 6793
147 Ga0436364_0309018 3300037853 Bacteria 153512
148 Ga0436364_0667897 3300037853 Bacteria 5319
149 Ga0436364_1059906 3300037853 Bacteria 6133
150 Ga0436364_1130159 3300037853 Bacteria 2268
151 Ga0395901_0206553 3300038443 Bacteria 2057
152 Ga0400490_40824 3300038726 Bacteria 20829
153 Ga0400485_09296 3300038735 Bacteria 16910
154 Ga0400485_17003 3300038735 Unclassified 4532
155 Ga0400483_050651 3300039062 Bacteria 141074
156 Ga0400483_097291 3300039062 Bacteria 4916
157 Ga0400483_115612 3300039062 Bacteria 13990
158 Ga0400483_158996 3300039062 Bacteria 61601
159 Ga0400483_241369 3300039062 Bacteria 16082
160 Ga0436365_0027091 3300039437 Bacteria 4102
161 Ga0436365_0794126 3300039437 Bacteria 6977
162 Ga0436365_0846562 3300039437 Bacteria 3279
163 Ga0436361_0080927 3300039447 Bacteria 2820
164 Ga0436361_0341689 3300039447 Bacteria 4294
165 Ga0436361_1143945 3300039447 Bacteria 34944
166 Ga0436363_0362655 3300039450 Bacteria 11417
167 Ga0436363_1700643 3300039450 Bacteria 8730
168 Ga0451577_0018815 3300042876 Bacteria 6355
169 Ga0451577_0049390 3300042876 Bacteria 3757
170 Ga0451577_0176974 3300042876 Bacteria 1923
171 Ga0451577_0184195 3300042876 Bacteria 1883
172 Ga0466969_0029723 3300044656 Bacteria 2788
173 Ga0466963_0113731 3300044694 Bacteria 1859
174 Ga0453684_0000873 3300044712 Bacteria 101078
175 Ga0453684_0001845 3300044712 Bacteria 55314
176 Ga0453684_0004163 3300044712 Bacteria 31238
177 Ga0453684_0038476 3300044712 Bacteria 6539
178 Ga0453684_0065132 3300044712 Bacteria 4649
179 Ga0451576_0000149 3300045051 Bacteria 178125
180 Ga0451576_0002548 3300045051 Bacteria 26932
181 Ga0451576_0037570 3300045051 Bacteria 5129
182 Ga0495651_0001071 3300046462 Bacteria 21091
183 Ga0495580_0006359 3300046472 Bacteria 9638
184 Ga0495580_0009597 3300046472 Bacteria 7602
185 Ga0495580_0009933 3300046472 Bacteria 7450
186 Ga0495580_0037498 3300046472 Bacteria 3478
187 Ga0495580_0047746 3300046472 Bacteria 3034
188 Ga0495580_0147216 3300046472 Bacteria 1632
189 Ga0495608_0004531 3300046511 Bacteria 9927
190 Ga0495628_0002871 3300046516 Bacteria 15438
191 Ga0495630_0004437 3300046517 Bacteria 9847
192 Ga0495630_0108498 3300046517 Bacteria 2103
193 Ga0495587_0130740 3300046536 Unclassified 1435
194 Ga0495667_0055228 3300046559 Bacteria 2612
195 Ga0495667_0135583 3300046559 Bacteria 1587
196 Ga0495623_0002224 3300046679 Bacteria 12910
197 Ga0495613_0007409 3300046689 Bacteria 8178
198 Ga0495674_0006995 3300047319 Bacteria 10793
199 Ga0495674_0053509 3300047319 Bacteria 3548
200 Ga0495684_0003981 3300047471 Bacteria 11524
201 Ga0495684_0011042 3300047471 Bacteria 6984
202 Ga0495684_0030959 3300047471 Bacteria 4108
203 Ga0495684_0076791 3300047471 Bacteria 2537
204 Ga0495684_0232108 3300047471 Bacteria 1349
205 Ga0495602_0057272 3300048088 Bacteria 3420
206 Ga0496106_0088385 3300048909 Bacteria 2389
207 Ga0496112_0067202 3300048915 Unclassified 3538
208 Ga0496115_0000676 3300048918 Bacteria 25197
209 Ga0501032_0001793 3300049569 Bacteria 16954
210 Ga0501033_0008413 3300049570 Bacteria 7989
211 Ga0501034_0001195 3300049571 Bacteria 35704
212 Ga0501034_0002851 3300049571 Bacteria 20144
213 Ga0501034_0009081 3300049571 Bacteria 10441
214 Ga0501034_0041713 3300049571 Unclassified 4643
215 Ga0501034_0185749 3300049571 Unclassified 2042
216 Ga0501036_0002426 3300049572 Bacteria 14597
217 Ga0501037_0013115 3300049573 Bacteria 6110
218 Ga0501037_0019915 3300049573 Bacteria 4952
219 Ga0501038_0002613 3300049574 Bacteria 16843
220 Ga0501042_0175477 3300049578 Bacteria 1546
221 Ga0501043_0017843 3300049579 Bacteria 5564
222 Ga0501046_0000835 3300049580 Bacteria 30000
223 Ga0501047_0007200 3300049581 Bacteria 10458
224 Ga0501047_0013176 3300049581 Bacteria 7831
225 Ga0501047_0033697 3300049581 Unclassified 4942
226 Ga0501047_0243073 3300049581 Bacteria 1650
227 Ga0501048_0005947 3300049582 Bacteria 9286
228 Ga0501048_0108400 3300049582 Bacteria 1961
229 Ga0501067_0006077 3300049583 Bacteria 6692
230 Ga0501068_0000890 3300049584 Bacteria 15599
231 Ga0501069_0007073 3300049585 Bacteria 5876
232 Ga0501070_0012672 3300049586 Bacteria 7111
233 Ga0501070_0027824 3300049586 Bacteria 4742
234 Ga0501070_0106261 3300049586 Bacteria 2320
235 Ga0501072_0002071 3300049588 Bacteria 14913
236 Ga0501073_0005630 3300049589 Bacteria 9372
237 Ga0501074_0003768 3300049590 Bacteria 10777
238 Ga0501077_0008816 3300049593 Bacteria 6258
239 Ga0501079_0005406 3300049741 Bacteria 9513
240 Ga0501080_0000129 3300049742 Bacteria 53483
241 Ga0501083_0014769 3300049744 Bacteria 5462
242 Ga0501083_0033626 3300049744 Unclassified 3509
243 Ga0501035_0020036 3300049822 Bacteria 6144
244 Ga0501035_0056273 3300049822 Unclassified 3509
245 Ga0501044_0001369 3300049823 Bacteria 28597
246 Ga0501044_0007210 3300049823 Bacteria 12231
247 Ga0501044_0018531 3300049823 Bacteria 7459
248 Ga0501044_0019196 3300049823 Bacteria 7318
249 Ga0501044_0051988 3300049823 Unclassified 4224
250 Ga0501044_0055579 3300049823 Bacteria 4066
251 Ga0501044_0097499 3300049823 Bacteria 2961
252 Ga0501045_0119790 3300049824 Bacteria 1954
253 nmdc:mga0qj67_66466_c1 3300050509 Bacteria 2872
254 nmdc:mga06r32_70724_c1 3300050510 Bacteria 3375
255 nmdc:mga08y16_15009_c1 3300050511 Bacteria 8148
256 nmdc:mga08x19_3406_c1 3300050514 Bacteria 9483
257 Ga0495601_0130604 3300053077 Bacteria 1636
258 Ga0501084_0000429 3300054114 Bacteria 32256
259 Ga0501082_0003571 3300060353 Bacteria 13578
260 Ga0501082_0121575 3300060353 Bacteria 2263
261 2821449825 2821443989 Bacteria 7658172
262 2844537861 2844533157 Bacteria 7517899
263 8055909994 8055909800 Bacteria 7278581
264 Ga0265326_10003076
265 SwRhRL2b_contig_3590747
266 JGI25151J46595_10000599
267 Ga0065704_10000671
268 Ga0065707_10082012
269 Ga0070658_10054271
270 Ga0070683_100006324
271 Ga0068869_100071987
272 Ga0070680_100123596
273 Ga0070660_100082338
274 Ga0070661_100102933
275 Ga0070674_100091361
276 Ga0070659_100070931
277 Ga0070709_10019608
278 Ga0070709_10022426
279 Ga0070714_100005068
280 Ga0070714_100035098
281 Ga0070714_100050800
282 Ga0070714_100066561
283 Ga0070713_100000505
284 Ga0070713_100034223
285 Ga0070713_100167257
286 Ga0070711_100002480
287 Ga0070711_100022028
288 Ga0070708_100046880
289 Ga0070681_10003453
290 Ga0070681_10054203
291 Ga0070707_100002171
292 Ga0070699_100010406
293 Ga0068853_100004105
294 Ga0068853_100006869
295 Ga0070665_100000533
296 Ga0070665_100006219
297 Ga0068855_100071867
298 Ga0070664_100067590
299 Ga0070664_100144246
300 Ga0068857_100027543
301 Ga0068856_100013858
302 Ga0068856_100106172
303 Ga0081539_10005181
304 Ga0070717_10011661
305 Ga0070717_10015617
306 Ga0070717_10073197
307 Ga0070717_10080457
308 Ga0075428_100027988
309 Ga0075428_100248403
310 Ga0075430_100048565
311 Ga0075430_100071262
312 Ga0075429_100080729
313 Ga0075429_100089135
314 Ga0075436_100000706
315 Ga0075436_100036898
316 Ga0075436_100055052
317 Ga0105240_10005171
318 Ga0105240_10090228
319 Ga0105240_10168028
320 Ga0105240_10223184
321 Ga0105240_10506811
322 Ga0111539_10006500
323 Ga0111539_10201328
324 Ga0105241_10110592
325 Ga0105248_10085593
326 Ga0105237_10056931
327 Ga0105238_10000036
328 Ga0105238_10199775
329 Ga0157370_10113046
330 Ga0157369_10034073
331 Ga0157369_10063198
332 Ga0157369_10098848
333 Ga0157374_10017134
334 Ga0157374_10101389
335 Ga0157378_10108489
336 Ga0157372_10080694
337 Ga0157372_10288559
338 Ga0163163_10025566
339 Ga0213872_10001957
340 Ga0213874_10017127
341 Ga0213875_10000090
342 Ga0213875_10032176
343 Ga0209130_1001961
344 Ga0209025_1000270
345 Ga0207426_1000453
346 Ga0207699_10040703
347 Ga0207705_10035074
348 Ga0207705_10048095
349 Ga0207707_10007528
350 Ga0207695_10001052
351 Ga0207695_10115133
352 Ga0207671_10038085
353 Ga0207693_10061885
354 Ga0207663_10047370
355 Ga0207660_10023262
356 Ga0207657_10007153
357 Ga0207646_10000175
358 Ga0207694_10002708
359 Ga0207700_10000635
360 Ga0207700_10023985
361 Ga0207664_10028675
362 Ga0207664_10049214
363 Ga0207664_10094061
364 Ga0207691_10016243
365 Ga0207691_10277960
366 Ga0207689_10095466
367 Ga0207661_10035483
368 Ga0207679_10002469
369 Ga0207679_10112225
370 Ga0207651_10202482
371 Ga0207658_10012749
372 Ga0207703_10178112
373 Ga0207639_10005624
374 Ga0207639_10008601
375 Ga0207702_10130923
376 Ga0207674_10002048
377 Ga0268266_10016518
378 Ga0268266_10017166
379 Ga0265334_10017036
380 Ga0265323_10051662
381 Ga0265338_10212412
382 Ga0265325_10004765
383 Ga0265325_10023856
384 Ga0265325_10044535
385 Ga0265325_10055338
386 Ga0265316_10014104
387 Ga0307509_10258972
388 Ga0265313_10007947
389 Ga0265313_10045164
390 Ga0307508_10176364
391 Ga0307410_10049596
392 Ga0373923_0012246
393 Ga0373923_0014091
394 Ga0373953_0044713
395 Ga0373935_0026625
396 Ga0373935_0153180
397 Ga0373927_0002530
398 Ga0373927_0006074
399 Ga0373927_0020065
400 Ga0373927_0088450
401 Ga0373933_0040282
402 Ga0373947_0030466
403 Ga0373947_0113237
404 Ga0373937_0020135
405 Ga0373937_0027699
406 Ga0373937_0042551
407 Ga0373925_0076871
408 Ga0373925_0170490
409 Ga0436364_0044130
410 Ga0436364_0309018
411 Ga0436364_0667897
412 Ga0436364_1059906
413 Ga0436364_1130159
414 Ga0395901_0206553
415 Ga0400490_40824
416 Ga0400485_09296
417 Ga0400485_17003
418 Ga0400483_050651
419 Ga0400483_097291
420 Ga0400483_115612
421 Ga0400483_158996
422 Ga0400483_241369
423 Ga0436365_0027091
424 Ga0436365_0794126
425 Ga0436365_0846562
426 Ga0436361_0080927
427 Ga0436361_0341689
428 Ga0436361_1143945
429 Ga0436363_0362655
430 Ga0436363_1700643
431 Ga0451577_0018815
432 Ga0451577_0049390
433 Ga0451577_0176974
434 Ga0451577_0184195
435 Ga0466969_0029723
436 Ga0466963_0113731
437 Ga0453684_0000873
438 Ga0453684_0001845
439 Ga0453684_0004163
440 Ga0453684_0038476
441 Ga0453684_0065132
442 Ga0451576_0000149
443 Ga0451576_0002548
444 Ga0451576_0037570
445 Ga0495651_0001071
446 Ga0495580_0006359
447 Ga0495580_0009597
448 Ga0495580_0009933
449 Ga0495580_0037498
450 Ga0495580_0047746
451 Ga0495580_0147216
452 Ga0495608_0004531
453 Ga0495628_0002871
454 Ga0495630_0004437
455 Ga0495630_0108498
456 Ga0495587_0130740
457 Ga0495667_0055228
458 Ga0495667_0135583
459 Ga0495623_0002224
460 Ga0495613_0007409
461 Ga0495674_0006995
462 Ga0495674_0053509
463 Ga0495684_0003981
464 Ga0495684_0011042
465 Ga0495684_0030959
466 Ga0495684_0076791
467 Ga0495684_0232108
468 Ga0495602_0057272
469 Ga0496106_0088385
470 Ga0496112_0067202
471 Ga0496115_0000676
472 Ga0501032_0001793
473 Ga0501033_0008413
474 Ga0501034_0001195
475 Ga0501034_0002851
476 Ga0501034_0009081
477 Ga0501034_0041713
478 Ga0501034_0185749
479 Ga0501036_0002426
480 Ga0501037_0013115
481 Ga0501037_0019915
482 Ga0501038_0002613
483 Ga0501042_0175477
484 Ga0501043_0017843
485 Ga0501046_0000835
486 Ga0501047_0007200
487 Ga0501047_0013176
488 Ga0501047_0033697
489 Ga0501047_0243073
490 Ga0501048_0005947
491 Ga0501048_0108400
492 Ga0501067_0006077
493 Ga0501068_0000890
494 Ga0501069_0007073
495 Ga0501070_0012672
496 Ga0501070_0027824
497 Ga0501070_0106261
498 Ga0501072_0002071
499 Ga0501073_0005630
500 Ga0501074_0003768
501 Ga0501077_0008816
502 Ga0501079_0005406
503 Ga0501080_0000129
504 Ga0501083_0014769
505 Ga0501083_0033626
506 Ga0501035_0020036
507 Ga0501035_0056273
508 Ga0501044_0001369
509 Ga0501044_0007210
510 Ga0501044_0018531
511 Ga0501044_0019196
512 Ga0501044_0051988
513 Ga0501044_0055579
514 Ga0501044_0097499
515 Ga0501045_0119790
516 nmdc:mga0qj67_66466_c1
517 nmdc:mga06r32_70724_c1
518 nmdc:mga08y16_15009_c1
519 nmdc:mga08x19_3406_c1
520 Ga0495601_0130604
521 Ga0501084_0000429
522 Ga0501082_0003571
523 Ga0501082_0121575
524 2821449825
525 2844537861
526 8055909994

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00006

ATP-synt_ab

ATP synthase alpha/beta family, nucleotide-binding domain

172

381

0.99

PF18269

T3SS_ATPase_C

T3SS EscN ATPase C-terminal domain

388

459

0.96

PF02874

ATP-synt_ab_N

ATP synthase alpha/beta family, beta-barrel domain

52

114

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
2dpy-assembly2.cif.gz_B crystal structure of the flagellar type iii atpase flii 0.9687 25 422
2dpy-assembly1.cif.gz_A crystal structure of the flagellar type iii atpase flii 0.9647 25 422
4nph-assembly1.cif.gz_A crystal structure of ssan from salmonella enterica 0.9585 82 422
6njp-assembly1.cif.gz_F structure of the assembled atpase escn in complex with its central stalk esco from the enteropathogenic e. coli (epec) type iii secretion system 0.9504 28 422
2obm-assembly1.cif.gz_A structural and biochemical analysis of a prototypical atpase from the type iii secretion system of pathogenic bacteria 0.9477 81 422
ID Description Score Start End Superfamily
2dpyB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.984 81 344 3.40.50.300
4nphA02 Mainly Alpha;Up-down Bundle;Substrate Binding Domain Of Dnak; Chain:A; Domain 2; 0.976 351 422 1.20.1270.330
af_A0A0R0JZ78_6_157_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9712 209 345 3.40.50.300
2dpyA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9647 25 422 3.40.50.12240
2dpyB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9624 81 344 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A3C0ASQ7-F1-model_v4 EscN/YscN/HrcN family type III secretion system ATPase 0.9976 113 241 GO:0005524
GO:0045261
GO:0046933
AF-A0A357D4L8-F1-model_v4 EscN/YscN/HrcN family type III secretion system ATPase 0.9957 168 317 GO:0005524
GO:0045261
GO:0046933
AF-A0A3D3I2S2-F1-model_v4 Flagellum-specific ATP synthase (EC 7.1.2.2) 0.9948 152 422 GO:0005524
GO:0005737
GO:0016887
GO:0030254
GO:0030257
GO:0044781
GO:0045261
GO:0046933
AF-A0A1V2ATX4-F1-model_v4 Flagellum-specific ATP synthase FliI 0.9948 135 333 GO:0005524
GO:0016887
GO:0045261
GO:0046933
AF-A0A6N3R427-F1-model_v4 Flagellum-specific ATP synthase (EC 7.1.2.2) 0.9946 131 422 GO:0005524
GO:0005737
GO:0016887
GO:0030254
GO:0030257
GO:0044781
GO:0045261
GO:0046933

Map