F371550
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 263 | 184 | 526 | 414 |
Family's Representative Sequence
| Representative Sequence | 3300002075|JGI24738J21930_10003399|JGI24738J21930_100033992 |
| Length | 446 |
| Sequence | MSQSGPPDELSAAQETDEKTPELELLTLRDGLPDVVETDTQLAAVVHDLAGGTGPVAIDAERASGYRYSARAYLIQLRREGSTTWLVDPTAFDDLTPLQEVLSGDEWILHAASQDLPCLREVGLEPTALFDTELAARLLGYPRVGLASLVEQLCGLRMRKEHSAADWSKRPLPSSWLEYAALDVEVLVEIRDRLARELVESGKDAWAEQEFAHVMAQRPVPRTDPWRRTSGMHKARGRRAVAAVRELWLTRDELAARRDVTPGRIIPDSAIVVAASALPTERSALLGLKGFHGRGAERYADRWIAAILTARELPESELPPVALRADGPPPPRAWAERDPVAAARLTAARAALAALSEERSVPVENMLTPDVVRRVLWSPPDPRQPAELAEAVATQLRDHGARDWQVELVGPVLVDSILHPAPAPDLPPEPSPLTDDLPEAEAPGVG |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300002075 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 | Metagenome | Rhizosphere |
| 2 | 3300002067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 | Metagenome | Rhizosphere |
| 3 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 4 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 5 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 6 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 7 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Metagenome | Rhizosphere |
| 9 | 3300005343 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG | Metagenome | Rhizosphere |
| 10 | 3300005345 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG | Metagenome | Rhizosphere |
| 11 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 18 | 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Metagenome | Rhizosphere |
| 19 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 20 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 21 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 22 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 25 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 26 | 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Metagenome | Rhizosphere |
| 27 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 28 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 29 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 30 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 31 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 32 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 33 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 34 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 35 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 36 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 38 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 39 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 40 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 41 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 43 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 44 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 45 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 46 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 47 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 48 | 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Metagenome | Rhizosphere |
| 49 | 3300020082 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 50 | 3300021358 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 | Metagenome | Rhizosphere |
| 51 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 52 | 3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300030521 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM | Metagenome | Unclassified |
| 75 | 3300030522 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM | Metagenome | Unclassified |
| 76 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 77 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 78 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 79 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 80 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 81 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 82 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 83 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 84 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 85 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 86 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 87 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 88 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 89 | 3300039453 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 | Metagenome | Rhizosphere |
| 90 | 3300041509 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG | Metagenome | Unclassified |
| 91 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 92 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 93 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 94 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 95 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 96 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 97 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 98 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 99 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 100 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 101 | 3300046453 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300046683 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300046794 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 105 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 106 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 107 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 108 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 109 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 110 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 111 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 112 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 113 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 114 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 115 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 116 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 117 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 118 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 119 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 120 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 121 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 122 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 123 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 124 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 125 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 126 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 127 | 3300049576 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 128 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 129 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 130 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 131 | 3300049585 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 | Metagenome | Rhizosphere |
| 132 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 133 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 134 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 135 | 3300049593 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 | Metagenome | Rhizosphere |
| 136 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 137 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 138 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 139 | 3300050516 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation | Metagenome | Endosphere |
| 140 | 3300053083 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere | Metagenome | Rhizosphere |
| 141 | 3300053088 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere | Metagenome | Endosphere |
| 142 | 3300053117 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere | Metagenome | Endosphere |
| 143 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 144 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 145 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
| 146 | 2643221546 | Microbacterium sp. Root53 | Isolate | Unclassified |
| 147 | 2643221553 | Microbacterium sp. Root553 | Isolate | Unclassified |
| 148 | 2643221597 | Microbacterium sp. Root180 | Isolate | Unclassified |
| 149 | 2643221615 | Nocardioides sp. Root224 | Isolate | Unclassified |
| 150 | 2643221657 | Nocardioides sp. Root1257 | Isolate | Unclassified |
| 151 | 2643221724 | Microbacterium sp. Root280D1 | Isolate | Unclassified |
| 152 | 2728369380 | Microbacterium sp. 1.5R | Isolate | Rhizosphere |
| 153 | 2757320536 | Microbacterium sp. NFIX05 | Isolate | Unclassified |
| 154 | 2773857758 | Microbacterium chocolatum 1320 | Isolate | Unclassified |
| 155 | 2799112218 | Motilibacter rhizosphaerae DSM 45622 | Isolate | Rhizosphere |
| 156 | 2852635781 | Streptomyces sp. AK010 | Isolate | Rhizosphere |
| 157 | 2852646457 | Microbacterium sp. AK031 | Isolate | Rhizosphere |
| 158 | 2852677369 | Pseudoclavibacter sp. JAI123 | Isolate | Rhizosphere |
| 159 | 2857720070 | Microbacterium sp. R-72113 | Isolate | Unclassified |
| 160 | 2857723135 | Microbacterium sp. R-72356 | Isolate | Unclassified |
| 161 | 2904509784 | Microbacterium sp. 1676 | Isolate | Rhizosphere |
| 162 | 2908678064 | Microbacterium sp. 1518 | Isolate | Rhizosphere |
| 163 | 2919069694 | Microbacterium sp. 1154 | Isolate | Unclassified |
| 164 | 2928090899 | Microbacterium sp. 1262 | Isolate | Rhizosphere |
| 165 | 2935390628 | Streptomyces sp. PvR034 | Isolate | Rhizosphere |
| 166 | 2945968032 | Microbacterium murale W2I7 | Isolate | Rhizosphere |
| 167 | 2946041624 | Microbacterium natoriense W4I9-1 | Isolate | Rhizosphere |
| 168 | 2946080515 | Microbacterium sp. W4I20 | Isolate | Rhizosphere |
| 169 | 2956939328 | Lolliginicoccus suaedae LNNU 331112 | Isolate | Rhizosphere |
| 170 | 2974294766 | Microbacterium proteolyticum SORGH_AS 209 | Isolate | Unclassified |
| 171 | 2974324384 | Microbacterium sp. SORGH_AS 344 | Isolate | Unclassified |
| 172 | 2977228692 | Microbacterium sp. SORGH_AS 421 | Isolate | Unclassified |
| 173 | 2977236895 | Microbacterium testaceum SORGH_AS 426 | Isolate | Unclassified |
| 174 | 2977264416 | Microbacterium testaceum SORGH_AS 594 | Isolate | Unclassified |
| 175 | 2984542743 | Microbacterium sp. SORGH_AS454 | Isolate | Aerial Root |
| 176 | 2984576629 | Nocardioides zeae SORGH_AS913 | Isolate | Aerial Root |
| 177 | 2984580707 | Microbacterium paludicola SORGH_AS919 | Isolate | Aerial Root |
| 178 | 2990256926 | Nocardioides zeae SORGH_AS885 | Isolate | Aerial Root |
| 179 | 3001119090 | Lolliginicoccus lacisalsi G463 | Isolate | Rhizosphere |
| 180 | 8004212874 | Microbacterium sp. NC79 | Isolate | Rhizosphere |
| 181 | 8016254467 | Microbacterium sp. SLBN-111 (version 3) | Isolate | Rhizosphere |
| 182 | 8025478263 | Streptomyces telluris AA8 | Isolate | Rhizosphere |
| 183 | 8056447290 | Streptomyces huiliensis SCA2-4 | Isolate | Rhizosphere |
| 184 | 8056667051 | Streptomyces sichuanensis SCA3-4 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 84.79 |
| Metatranscriptomes | 0.38 |
| Isolates | 14.83 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 1.52 |
| Bulb | 0 |
| Endosphere | 3.42 |
| Nodule | 0 |
| Rhizoplane | 10.27 |
| Rhizosphere | 68.06 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI24738J21930_10003399 | 3300002075 | Bacteria | 4020 |
| 2 | JGI24735J21928_10039816 | 3300002067 | Bacteria | 1373 |
| 3 | Ga0070658_10024707 | 3300005327 | Bacteria | 4818 |
| 4 | Ga0070658_10039493 | 3300005327 | Bacteria | 3808 |
| 5 | Ga0070658_10239681 | 3300005327 | Bacteria | 1537 |
| 6 | Ga0070683_100053498 | 3300005329 | Bacteria | 3741 |
| 7 | Ga0070683_100174382 | 3300005329 | Bacteria | 2041 |
| 8 | Ga0070682_100043532 | 3300005337 | Bacteria | 2776 |
| 9 | Ga0068868_100052812 | 3300005338 | Bacteria | 3200 |
| 10 | Ga0070660_100070292 | 3300005339 | Bacteria | 2732 |
| 11 | Ga0070660_100090317 | 3300005339 | Bacteria | 2415 |
| 12 | Ga0070660_100125441 | 3300005339 | Bacteria | 2051 |
| 13 | Ga0070691_10007226 | 3300005341 | Bacteria | 5084 |
| 14 | Ga0070687_100010153 | 3300005343 | Bacteria | 4059 |
| 15 | Ga0070692_10013245 | 3300005345 | Bacteria | 3840 |
| 16 | Ga0070673_100032284 | 3300005364 | Bacteria | 3940 |
| 17 | Ga0070659_100013559 | 3300005366 | Bacteria | 6070 |
| 18 | Ga0070659_100037436 | 3300005366 | Bacteria | 3782 |
| 19 | Ga0070667_100078959 | 3300005367 | Bacteria | 2813 |
| 20 | Ga0070714_100001830 | 3300005435 | Bacteria | 15473 |
| 21 | Ga0070678_100044085 | 3300005456 | Bacteria | 3183 |
| 22 | Ga0070678_100073333 | 3300005456 | Bacteria | 2569 |
| 23 | Ga0070662_100053532 | 3300005457 | Bacteria | 2922 |
| 24 | Ga0068867_100019130 | 3300005459 | Bacteria | 4877 |
| 25 | Ga0070685_10145022 | 3300005466 | Bacteria | 1499 |
| 26 | Ga0070679_100016174 | 3300005530 | Bacteria | 7188 |
| 27 | Ga0070684_100000859 | 3300005535 | Bacteria | 21453 |
| 28 | Ga0070684_100037873 | 3300005535 | Bacteria | 4140 |
| 29 | Ga0070684_100230015 | 3300005535 | Bacteria | 1693 |
| 30 | Ga0068853_100051750 | 3300005539 | Bacteria | 3536 |
| 31 | Ga0070672_100004836 | 3300005543 | Bacteria | 8850 |
| 32 | Ga0070665_100000606 | 3300005548 | Bacteria | 49390 |
| 33 | Ga0068857_100016723 | 3300005577 | Bacteria | 6426 |
| 34 | Ga0068856_100033491 | 3300005614 | Bacteria | 5031 |
| 35 | Ga0070702_100001666 | 3300005615 | Bacteria | 9225 |
| 36 | Ga0068852_100044203 | 3300005616 | Bacteria | 3781 |
| 37 | Ga0068864_100033319 | 3300005618 | Bacteria | 4380 |
| 38 | Ga0068861_100037029 | 3300005719 | Bacteria | 3625 |
| 39 | Ga0068858_100226640 | 3300005842 | Bacteria | 1771 |
| 40 | Ga0068860_100001073 | 3300005843 | Bacteria | 30143 |
| 41 | Ga0068860_100121546 | 3300005843 | Bacteria | 2501 |
| 42 | Ga0081539_10099485 | 3300005985 | Bacteria | 1485 |
| 43 | Ga0075365_10026697 | 3300006038 | Bacteria | 3668 |
| 44 | Ga0075363_100038225 | 3300006048 | Bacteria | 2523 |
| 45 | Ga0075364_10019844 | 3300006051 | Bacteria | 4224 |
| 46 | Ga0097621_100167333 | 3300006237 | Bacteria | 1893 |
| 47 | Ga0075370_10006141 | 3300006353 | Bacteria | 6025 |
| 48 | Ga0068865_100024684 | 3300006881 | Bacteria | 3947 |
| 49 | Ga0068865_100118152 | 3300006881 | Bacteria | 1967 |
| 50 | Ga0105245_10007388 | 3300009098 | Bacteria | 9622 |
| 51 | Ga0105245_10014379 | 3300009098 | Bacteria | 6896 |
| 52 | Ga0105243_10012761 | 3300009148 | Bacteria | 6345 |
| 53 | Ga0105243_10317272 | 3300009148 | Bacteria | 1419 |
| 54 | Ga0105248_10042849 | 3300009177 | Bacteria | 5075 |
| 55 | Ga0105249_10197661 | 3300009553 | Bacteria | 1966 |
| 56 | Ga0105239_10003082 | 3300010375 | Bacteria | 20711 |
| 57 | Ga0105239_10054721 | 3300010375 | Bacteria | 4378 |
| 58 | Ga0105239_10142676 | 3300010375 | Bacteria | 2670 |
| 59 | Ga0105246_10015819 | 3300011119 | Bacteria | 4770 |
| 60 | Ga0157372_10013227 | 3300013307 | Bacteria | 8807 |
| 61 | Ga0157372_10089213 | 3300013307 | Bacteria | 3503 |
| 62 | Ga0157372_10190697 | 3300013307 | Bacteria | 2374 |
| 63 | Ga0157372_10214224 | 3300013307 | Bacteria | 2232 |
| 64 | Ga0157375_10006488 | 3300013308 | Bacteria | 10188 |
| 65 | Ga0157375_10194719 | 3300013308 | Bacteria | 2182 |
| 66 | Ga0157375_10242950 | 3300013308 | Bacteria | 1960 |
| 67 | Ga0163163_10007508 | 3300014325 | Bacteria | 9622 |
| 68 | Ga0163163_10189590 | 3300014325 | Bacteria | 2104 |
| 69 | Ga0157377_10009640 | 3300014745 | Bacteria | 4749 |
| 70 | Ga0206353_10659416 | 3300020082 | Bacteria | 2608 |
| 71 | Ga0213873_10000173 | 3300021358 | Bacteria | 11928 |
| 72 | Ga0213875_10004288 | 3300021388 | Bacteria | 7853 |
| 73 | Ga0207643_10003700 | 3300025908 | Bacteria | 8226 |
| 74 | Ga0207643_10036816 | 3300025908 | Bacteria | 2745 |
| 75 | Ga0207705_10030209 | 3300025909 | Bacteria | 3866 |
| 76 | Ga0207660_10043589 | 3300025917 | Bacteria | 3153 |
| 77 | Ga0207657_10055403 | 3300025919 | Bacteria | 3425 |
| 78 | Ga0207657_10055590 | 3300025919 | Bacteria | 3418 |
| 79 | Ga0207687_10018606 | 3300025927 | Bacteria | 4589 |
| 80 | Ga0207690_10035699 | 3300025932 | Bacteria | 3214 |
| 81 | Ga0207690_10063189 | 3300025932 | Bacteria | 2524 |
| 82 | Ga0207709_10031012 | 3300025935 | Bacteria | 3117 |
| 83 | Ga0207704_10035447 | 3300025938 | Bacteria | 2859 |
| 84 | Ga0207691_10010548 | 3300025940 | Bacteria | 8865 |
| 85 | Ga0207661_10058365 | 3300025944 | Bacteria | 3105 |
| 86 | Ga0207667_10040919 | 3300025949 | Bacteria | 4932 |
| 87 | Ga0207640_10046049 | 3300025981 | Bacteria | 2804 |
| 88 | Ga0207677_10071178 | 3300026023 | Bacteria | 2453 |
| 89 | Ga0207677_10136984 | 3300026023 | Bacteria | 1868 |
| 90 | Ga0207703_10159303 | 3300026035 | Bacteria | 1976 |
| 91 | Ga0207708_10002132 | 3300026075 | Bacteria | 14600 |
| 92 | Ga0207648_10005257 | 3300026089 | Bacteria | 13072 |
| 93 | Ga0207648_10076121 | 3300026089 | Bacteria | 2925 |
| 94 | Ga0207676_10043292 | 3300026095 | Bacteria | 3466 |
| 95 | Ga0207674_10009755 | 3300026116 | Bacteria | 10937 |
| 96 | Ga0207683_10062861 | 3300026121 | Bacteria | 3270 |
| 97 | Ga0207683_10157036 | 3300026121 | Bacteria | 2055 |
| 98 | Ga0207698_10022566 | 3300026142 | Bacteria | 4377 |
| 99 | Ga0268266_10004169 | 3300028379 | Bacteria | 13938 |
| 100 | Ga0268264_10000687 | 3300028381 | Bacteria | 39363 |
| 101 | Ga0307511_10000713 | 3300030521 | Bacteria | 35403 |
| 102 | Ga0307512_10039840 | 3300030522 | Bacteria | 3931 |
| 103 | Ga0307516_10106481 | 3300031730 | Bacteria | 2614 |
| 104 | Ga0307413_10012262 | 3300031824 | Bacteria | 4259 |
| 105 | Ga0307410_10174854 | 3300031852 | Bacteria | 1621 |
| 106 | Ga0307406_10009556 | 3300031901 | Bacteria | 5445 |
| 107 | Ga0307406_10094101 | 3300031901 | Bacteria | 2025 |
| 108 | Ga0307412_10037217 | 3300031911 | Bacteria | 3125 |
| 109 | Ga0307412_10064140 | 3300031911 | Bacteria | 2481 |
| 110 | Ga0307409_100123452 | 3300031995 | Bacteria | 2198 |
| 111 | Ga0307416_100018760 | 3300032002 | Bacteria | 4884 |
| 112 | Ga0307414_10009977 | 3300032004 | Bacteria | 5483 |
| 113 | Ga0307411_10021943 | 3300032005 | Bacteria | 3749 |
| 114 | Ga0307510_10062728 | 3300033180 | Bacteria | 3794 |
| 115 | Ga0395900_0139951 | 3300037418 | Bacteria | 2479 |
| 116 | Ga0436364_0857252 | 3300037853 | Bacteria | 4143 |
| 117 | Ga0436364_1402708 | 3300037853 | Bacteria | 14463 |
| 118 | Ga0395901_0058984 | 3300038443 | Bacteria | 3993 |
| 119 | Ga0395901_0085976 | 3300038443 | Bacteria | 3288 |
| 120 | Ga0436362_0069678 | 3300039453 | Bacteria | 57350 |
| 121 | Ga0451843_1093684 | 3300041509 | Bacteria | 2001 |
| 122 | Ga0466972_0077165 | 3300044658 | Bacteria | 1587 |
| 123 | Ga0466965_0011979 | 3300044683 | Bacteria | 4071 |
| 124 | Ga0466965_0076384 | 3300044683 | Bacteria | 1690 |
| 125 | Ga0466966_0050923 | 3300044684 | Bacteria | 2633 |
| 126 | Ga0466961_0035478 | 3300044693 | Bacteria | 3203 |
| 127 | Ga0466963_0038915 | 3300044694 | Bacteria | 3112 |
| 128 | Ga0466970_0014097 | 3300044765 | Bacteria | 4099 |
| 129 | Ga0466970_0019452 | 3300044765 | Bacteria | 3521 |
| 130 | Ga0466970_0040792 | 3300044765 | Bacteria | 2465 |
| 131 | Ga0466970_0055402 | 3300044765 | Bacteria | 2117 |
| 132 | Ga0466957_0025822 | 3300044842 | Bacteria | 3482 |
| 133 | Ga0466960_0003349 | 3300044901 | Bacteria | 6152 |
| 134 | Ga0466960_0006594 | 3300044901 | Bacteria | 4664 |
| 135 | Ga0466960_0011152 | 3300044901 | Bacteria | 3749 |
| 136 | Ga0466960_0012917 | 3300044901 | Bacteria | 3537 |
| 137 | Ga0466960_0014012 | 3300044901 | Bacteria | 3419 |
| 138 | Ga0466959_0108808 | 3300045049 | Bacteria | 1979 |
| 139 | Ga0466967_0009352 | 3300045976 | Bacteria | 7267 |
| 140 | Ga0466967_0010070 | 3300045976 | Bacteria | 7065 |
| 141 | Ga0466967_0037299 | 3300045976 | Bacteria | 4158 |
| 142 | Ga0466967_0114014 | 3300045976 | Bacteria | 2488 |
| 143 | Ga0466967_0144450 | 3300045976 | Bacteria | 2218 |
| 144 | Ga0495627_005227 | 3300046453 | Bacteria | 5269 |
| 145 | Ga0495658_0016627 | 3300046683 | Bacteria | 3787 |
| 146 | Ga0495589_0008437 | 3300046794 | Bacteria | 5383 |
| 147 | Ga0496101_0011077 | 3300048904 | Bacteria | 5975 |
| 148 | Ga0496101_0027294 | 3300048904 | Bacteria | 3976 |
| 149 | Ga0496102_0030321 | 3300048905 | Bacteria | 4840 |
| 150 | Ga0496102_0034295 | 3300048905 | Bacteria | 4564 |
| 151 | Ga0496103_0020948 | 3300048906 | Bacteria | 3931 |
| 152 | Ga0496104_0042693 | 3300048907 | Bacteria | 4257 |
| 153 | Ga0496104_0053647 | 3300048907 | Bacteria | 3809 |
| 154 | Ga0496106_0174991 | 3300048909 | Bacteria | 1702 |
| 155 | Ga0496107_0018353 | 3300048910 | Bacteria | 4926 |
| 156 | Ga0496107_0034807 | 3300048910 | Bacteria | 3609 |
| 157 | Ga0496107_0052593 | 3300048910 | Bacteria | 2938 |
| 158 | Ga0496108_0013842 | 3300048911 | Bacteria | 6580 |
| 159 | Ga0496108_0161833 | 3300048911 | Bacteria | 1935 |
| 160 | Ga0496109_0004367 | 3300048912 | Bacteria | 11813 |
| 161 | Ga0496109_0035220 | 3300048912 | Bacteria | 4514 |
| 162 | Ga0496109_0038345 | 3300048912 | Bacteria | 4332 |
| 163 | Ga0496109_0102270 | 3300048912 | Bacteria | 2659 |
| 164 | Ga0496109_0105101 | 3300048912 | Bacteria | 2622 |
| 165 | Ga0496109_0182812 | 3300048912 | Bacteria | 1969 |
| 166 | Ga0496110_0008067 | 3300048913 | Bacteria | 8453 |
| 167 | Ga0496110_0077678 | 3300048913 | Bacteria | 2954 |
| 168 | Ga0496113_0079781 | 3300048916 | Bacteria | 2506 |
| 169 | Ga0496114_0005642 | 3300048917 | Bacteria | 9814 |
| 170 | Ga0496114_0019142 | 3300048917 | Bacteria | 5547 |
| 171 | Ga0496114_0035661 | 3300048917 | Bacteria | 4108 |
| 172 | Ga0496115_0024020 | 3300048918 | Bacteria | 4735 |
| 173 | Ga0496115_0101400 | 3300048918 | Bacteria | 2360 |
| 174 | Ga0496117_0000413 | 3300048920 | Bacteria | 71922 |
| 175 | Ga0496117_0001712 | 3300048920 | Bacteria | 30358 |
| 176 | Ga0496117_0026108 | 3300048920 | Bacteria | 4575 |
| 177 | Ga0496118_0028561 | 3300048921 | Bacteria | 4695 |
| 178 | Ga0496119_0003224 | 3300048922 | Bacteria | 17071 |
| 179 | Ga0496119_0049995 | 3300048922 | Bacteria | 2580 |
| 180 | Ga0496120_0001021 | 3300048923 | Bacteria | 37451 |
| 181 | Ga0496120_0006127 | 3300048923 | Bacteria | 9325 |
| 182 | Ga0496122_0004961 | 3300048925 | Bacteria | 16123 |
| 183 | Ga0496122_0009423 | 3300048925 | Bacteria | 10292 |
| 184 | Ga0496122_0033891 | 3300048925 | Bacteria | 4191 |
| 185 | Ga0496122_0061266 | 3300048925 | Bacteria | 2763 |
| 186 | Ga0496123_0053539 | 3300048926 | Bacteria | 2666 |
| 187 | Ga0496124_0012959 | 3300048927 | Bacteria | 8176 |
| 188 | Ga0496124_0097548 | 3300048927 | Bacteria | 2386 |
| 189 | Ga0496125_0000640 | 3300048928 | Bacteria | 58381 |
| 190 | Ga0496125_0009892 | 3300048928 | Bacteria | 9701 |
| 191 | Ga0496125_0011812 | 3300048928 | Bacteria | 8703 |
| 192 | Ga0496126_0000006 | 3300048929 | Bacteria | 798804 |
| 193 | Ga0496126_0002895 | 3300048929 | Bacteria | 22382 |
| 194 | Ga0501034_0009129 | 3300049571 | Bacteria | 10410 |
| 195 | Ga0501037_0059736 | 3300049573 | Bacteria | 2781 |
| 196 | Ga0501037_0130501 | 3300049573 | Bacteria | 1802 |
| 197 | Ga0501040_0061704 | 3300049576 | Bacteria | 2579 |
| 198 | Ga0501040_0069331 | 3300049576 | Bacteria | 2433 |
| 199 | Ga0501047_0031615 | 3300049581 | Bacteria | 5107 |
| 200 | Ga0501047_0042290 | 3300049581 | Bacteria | 4404 |
| 201 | Ga0501067_0002696 | 3300049583 | Bacteria | 9795 |
| 202 | Ga0501067_0006639 | 3300049583 | Bacteria | 6419 |
| 203 | Ga0501067_0015345 | 3300049583 | Bacteria | 4240 |
| 204 | Ga0501067_0032627 | 3300049583 | Bacteria | 2891 |
| 205 | Ga0501068_0003366 | 3300049584 | Bacteria | 8588 |
| 206 | Ga0501069_0000486 | 3300049585 | Bacteria | 18160 |
| 207 | Ga0501069_0007807 | 3300049585 | Bacteria | 5618 |
| 208 | Ga0501070_0002647 | 3300049586 | Bacteria | 15633 |
| 209 | Ga0501070_0019595 | 3300049586 | Bacteria | 5672 |
| 210 | Ga0501070_0051430 | 3300049586 | Bacteria | 3420 |
| 211 | Ga0501071_0005406 | 3300049587 | Bacteria | 8206 |
| 212 | Ga0501073_0001137 | 3300049589 | Bacteria | 19351 |
| 213 | Ga0501077_0004994 | 3300049593 | Bacteria | 8043 |
| 214 | Ga0501080_0016285 | 3300049742 | Bacteria | 6864 |
| 215 | Ga0501083_0012986 | 3300049744 | Bacteria | 5819 |
| 216 | nmdc:mga00v17_161319_c1 | 3300050491 | Bacteria | 1443 |
| 217 | nmdc:mga00v17_7467_c1 | 3300050491 | Bacteria | 3061 |
| 218 | nmdc:mga0sz30_93003_c1 | 3300050516 | Bacteria | 1313 |
| 219 | Ga0495655_0008130 | 3300053083 | Bacteria | 1981 |
| 220 | Ga0500644_0000143 | 3300053088 | Bacteria | 44243 |
| 221 | Ga0500593_000367 | 3300053117 | Bacteria | 18158 |
| 222 | Ga0501084_0013970 | 3300054114 | Bacteria | 6647 |
| 223 | Ga0501082_0010017 | 3300060353 | Bacteria | 8171 |
| 224 | Ga0466962_0018074 | 3300061719 | Bacteria | 3391 |
| 225 | 2643752084 | 2643221546 | Bacteria | 2910897 |
| 226 | 2643785826 | 2643221553 | Bacteria | 3544260 |
| 227 | 2643995773 | 2643221597 | Bacteria | 3347721 |
| 228 | 2644091538 | 2643221615 | Bacteria | 5487866 |
| 229 | 2644321341 | 2643221657 | Bacteria | 5490246 |
| 230 | 2644680229 | 2643221724 | Bacteria | 3593515 |
| 231 | 2730229680 | 2728369380 | Bacteria | 3620317 |
| 232 | 2758226169 | 2757320536 | Bacteria | 3629334 |
| 233 | 2774380486 | 2773857758 | Bacteria | 3592392 |
| 234 | 2799184091 | 2799112218 | Bacteria | 4315149 |
| 235 | 2852638772 | 2852635781 | Bacteria | 8251373 |
| 236 | 2852647326 | 2852646457 | Bacteria | 3408613 |
| 237 | 2852679261 | 2852677369 | Bacteria | 3768884 |
| 238 | 2857721137 | 2857720070 | Bacteria | 3189373 |
| 239 | 2857723850 | 2857723135 | Bacteria | 4217853 |
| 240 | 2904512056 | 2904509784 | Bacteria | 3520416 |
| 241 | 2908680973 | 2908678064 | Bacteria | 3482747 |
| 242 | 2919072557 | 2919069694 | Bacteria | 3622919 |
| 243 | 2928092214 | 2928090899 | Bacteria | 3158267 |
| 244 | 2935391144 | 2935390628 | Bacteria | 7043367 |
| 245 | 2945971802 | 2945968032 | Bacteria | 4111363 |
| 246 | 2946044256 | 2946041624 | Bacteria | 4191385 |
| 247 | 2946080899 | 2946080515 | Bacteria | 4310960 |
| 248 | 2956940300 | 2956939328 | Bacteria | 3474458 |
| 249 | 2974297115 | 2974294766 | Bacteria | 3767688 |
| 250 | 2974326650 | 2974324384 | Bacteria | 3750535 |
| 251 | 2977231351 | 2977228692 | Bacteria | 3450105 |
| 252 | 2977240132 | 2977236895 | Bacteria | 3569373 |
| 253 | 2977266574 | 2977264416 | Bacteria | 3750737 |
| 254 | 2984545595 | 2984542743 | Bacteria | 3569378 |
| 255 | 2984579116 | 2984576629 | Bacteria | 4248407 |
| 256 | 2984581012 | 2984580707 | Bacteria | 3351387 |
| 257 | 2990259990 | 2990256926 | Bacteria | 4252839 |
| 258 | 3001121714 | 3001119090 | Bacteria | 3449530 |
| 259 | 8004214271 | 8004212874 | Bacteria | 2861420 |
| 260 | 8016257606 | 8016254467 | Bacteria | 3797036 |
| 261 | 8025479469 | 8025478263 | Bacteria | 8209203 |
| 262 | 8056449542 | 8056447290 | Bacteria | 7680491 |
| 263 | 8056667074 | 8056667051 | Bacteria | 6953971 |
| 264 | JGI24738J21930_10003399 | |||
| 265 | JGI24735J21928_10039816 | |||
| 266 | Ga0070658_10024707 | |||
| 267 | Ga0070658_10039493 | |||
| 268 | Ga0070658_10239681 | |||
| 269 | Ga0070683_100053498 | |||
| 270 | Ga0070683_100174382 | |||
| 271 | Ga0070682_100043532 | |||
| 272 | Ga0068868_100052812 | |||
| 273 | Ga0070660_100070292 | |||
| 274 | Ga0070660_100090317 | |||
| 275 | Ga0070660_100125441 | |||
| 276 | Ga0070691_10007226 | |||
| 277 | Ga0070687_100010153 | |||
| 278 | Ga0070692_10013245 | |||
| 279 | Ga0070673_100032284 | |||
| 280 | Ga0070659_100013559 | |||
| 281 | Ga0070659_100037436 | |||
| 282 | Ga0070667_100078959 | |||
| 283 | Ga0070714_100001830 | |||
| 284 | Ga0070678_100044085 | |||
| 285 | Ga0070678_100073333 | |||
| 286 | Ga0070662_100053532 | |||
| 287 | Ga0068867_100019130 | |||
| 288 | Ga0070685_10145022 | |||
| 289 | Ga0070679_100016174 | |||
| 290 | Ga0070684_100000859 | |||
| 291 | Ga0070684_100037873 | |||
| 292 | Ga0070684_100230015 | |||
| 293 | Ga0068853_100051750 | |||
| 294 | Ga0070672_100004836 | |||
| 295 | Ga0070665_100000606 | |||
| 296 | Ga0068857_100016723 | |||
| 297 | Ga0068856_100033491 | |||
| 298 | Ga0070702_100001666 | |||
| 299 | Ga0068852_100044203 | |||
| 300 | Ga0068864_100033319 | |||
| 301 | Ga0068861_100037029 | |||
| 302 | Ga0068858_100226640 | |||
| 303 | Ga0068860_100001073 | |||
| 304 | Ga0068860_100121546 | |||
| 305 | Ga0081539_10099485 | |||
| 306 | Ga0075365_10026697 | |||
| 307 | Ga0075363_100038225 | |||
| 308 | Ga0075364_10019844 | |||
| 309 | Ga0097621_100167333 | |||
| 310 | Ga0075370_10006141 | |||
| 311 | Ga0068865_100024684 | |||
| 312 | Ga0068865_100118152 | |||
| 313 | Ga0105245_10007388 | |||
| 314 | Ga0105245_10014379 | |||
| 315 | Ga0105243_10012761 | |||
| 316 | Ga0105243_10317272 | |||
| 317 | Ga0105248_10042849 | |||
| 318 | Ga0105249_10197661 | |||
| 319 | Ga0105239_10003082 | |||
| 320 | Ga0105239_10054721 | |||
| 321 | Ga0105239_10142676 | |||
| 322 | Ga0105246_10015819 | |||
| 323 | Ga0157372_10013227 | |||
| 324 | Ga0157372_10089213 | |||
| 325 | Ga0157372_10190697 | |||
| 326 | Ga0157372_10214224 | |||
| 327 | Ga0157375_10006488 | |||
| 328 | Ga0157375_10194719 | |||
| 329 | Ga0157375_10242950 | |||
| 330 | Ga0163163_10007508 | |||
| 331 | Ga0163163_10189590 | |||
| 332 | Ga0157377_10009640 | |||
| 333 | Ga0206353_10659416 | |||
| 334 | Ga0213873_10000173 | |||
| 335 | Ga0213875_10004288 | |||
| 336 | Ga0207643_10003700 | |||
| 337 | Ga0207643_10036816 | |||
| 338 | Ga0207705_10030209 | |||
| 339 | Ga0207660_10043589 | |||
| 340 | Ga0207657_10055403 | |||
| 341 | Ga0207657_10055590 | |||
| 342 | Ga0207687_10018606 | |||
| 343 | Ga0207690_10035699 | |||
| 344 | Ga0207690_10063189 | |||
| 345 | Ga0207709_10031012 | |||
| 346 | Ga0207704_10035447 | |||
| 347 | Ga0207691_10010548 | |||
| 348 | Ga0207661_10058365 | |||
| 349 | Ga0207667_10040919 | |||
| 350 | Ga0207640_10046049 | |||
| 351 | Ga0207677_10071178 | |||
| 352 | Ga0207677_10136984 | |||
| 353 | Ga0207703_10159303 | |||
| 354 | Ga0207708_10002132 | |||
| 355 | Ga0207648_10005257 | |||
| 356 | Ga0207648_10076121 | |||
| 357 | Ga0207676_10043292 | |||
| 358 | Ga0207674_10009755 | |||
| 359 | Ga0207683_10062861 | |||
| 360 | Ga0207683_10157036 | |||
| 361 | Ga0207698_10022566 | |||
| 362 | Ga0268266_10004169 | |||
| 363 | Ga0268264_10000687 | |||
| 364 | Ga0307511_10000713 | |||
| 365 | Ga0307512_10039840 | |||
| 366 | Ga0307516_10106481 | |||
| 367 | Ga0307413_10012262 | |||
| 368 | Ga0307410_10174854 | |||
| 369 | Ga0307406_10009556 | |||
| 370 | Ga0307406_10094101 | |||
| 371 | Ga0307412_10037217 | |||
| 372 | Ga0307412_10064140 | |||
| 373 | Ga0307409_100123452 | |||
| 374 | Ga0307416_100018760 | |||
| 375 | Ga0307414_10009977 | |||
| 376 | Ga0307411_10021943 | |||
| 377 | Ga0307510_10062728 | |||
| 378 | Ga0395900_0139951 | |||
| 379 | Ga0436364_0857252 | |||
| 380 | Ga0436364_1402708 | |||
| 381 | Ga0395901_0058984 | |||
| 382 | Ga0395901_0085976 | |||
| 383 | Ga0436362_0069678 | |||
| 384 | Ga0451843_1093684 | |||
| 385 | Ga0466972_0077165 | |||
| 386 | Ga0466965_0011979 | |||
| 387 | Ga0466965_0076384 | |||
| 388 | Ga0466966_0050923 | |||
| 389 | Ga0466961_0035478 | |||
| 390 | Ga0466963_0038915 | |||
| 391 | Ga0466970_0014097 | |||
| 392 | Ga0466970_0019452 | |||
| 393 | Ga0466970_0040792 | |||
| 394 | Ga0466970_0055402 | |||
| 395 | Ga0466957_0025822 | |||
| 396 | Ga0466960_0003349 | |||
| 397 | Ga0466960_0006594 | |||
| 398 | Ga0466960_0011152 | |||
| 399 | Ga0466960_0012917 | |||
| 400 | Ga0466960_0014012 | |||
| 401 | Ga0466959_0108808 | |||
| 402 | Ga0466967_0009352 | |||
| 403 | Ga0466967_0010070 | |||
| 404 | Ga0466967_0037299 | |||
| 405 | Ga0466967_0114014 | |||
| 406 | Ga0466967_0144450 | |||
| 407 | Ga0495627_005227 | |||
| 408 | Ga0495658_0016627 | |||
| 409 | Ga0495589_0008437 | |||
| 410 | Ga0496101_0011077 | |||
| 411 | Ga0496101_0027294 | |||
| 412 | Ga0496102_0030321 | |||
| 413 | Ga0496102_0034295 | |||
| 414 | Ga0496103_0020948 | |||
| 415 | Ga0496104_0042693 | |||
| 416 | Ga0496104_0053647 | |||
| 417 | Ga0496106_0174991 | |||
| 418 | Ga0496107_0018353 | |||
| 419 | Ga0496107_0034807 | |||
| 420 | Ga0496107_0052593 | |||
| 421 | Ga0496108_0013842 | |||
| 422 | Ga0496108_0161833 | |||
| 423 | Ga0496109_0004367 | |||
| 424 | Ga0496109_0035220 | |||
| 425 | Ga0496109_0038345 | |||
| 426 | Ga0496109_0102270 | |||
| 427 | Ga0496109_0105101 | |||
| 428 | Ga0496109_0182812 | |||
| 429 | Ga0496110_0008067 | |||
| 430 | Ga0496110_0077678 | |||
| 431 | Ga0496113_0079781 | |||
| 432 | Ga0496114_0005642 | |||
| 433 | Ga0496114_0019142 | |||
| 434 | Ga0496114_0035661 | |||
| 435 | Ga0496115_0024020 | |||
| 436 | Ga0496115_0101400 | |||
| 437 | Ga0496117_0000413 | |||
| 438 | Ga0496117_0001712 | |||
| 439 | Ga0496117_0026108 | |||
| 440 | Ga0496118_0028561 | |||
| 441 | Ga0496119_0003224 | |||
| 442 | Ga0496119_0049995 | |||
| 443 | Ga0496120_0001021 | |||
| 444 | Ga0496120_0006127 | |||
| 445 | Ga0496122_0004961 | |||
| 446 | Ga0496122_0009423 | |||
| 447 | Ga0496122_0033891 | |||
| 448 | Ga0496122_0061266 | |||
| 449 | Ga0496123_0053539 | |||
| 450 | Ga0496124_0012959 | |||
| 451 | Ga0496124_0097548 | |||
| 452 | Ga0496125_0000640 | |||
| 453 | Ga0496125_0009892 | |||
| 454 | Ga0496125_0011812 | |||
| 455 | Ga0496126_0000006 | |||
| 456 | Ga0496126_0002895 | |||
| 457 | Ga0501034_0009129 | |||
| 458 | Ga0501037_0059736 | |||
| 459 | Ga0501037_0130501 | |||
| 460 | Ga0501040_0061704 | |||
| 461 | Ga0501040_0069331 | |||
| 462 | Ga0501047_0031615 | |||
| 463 | Ga0501047_0042290 | |||
| 464 | Ga0501067_0002696 | |||
| 465 | Ga0501067_0006639 | |||
| 466 | Ga0501067_0015345 | |||
| 467 | Ga0501067_0032627 | |||
| 468 | Ga0501068_0003366 | |||
| 469 | Ga0501069_0000486 | |||
| 470 | Ga0501069_0007807 | |||
| 471 | Ga0501070_0002647 | |||
| 472 | Ga0501070_0019595 | |||
| 473 | Ga0501070_0051430 | |||
| 474 | Ga0501071_0005406 | |||
| 475 | Ga0501073_0001137 | |||
| 476 | Ga0501077_0004994 | |||
| 477 | Ga0501080_0016285 | |||
| 478 | Ga0501083_0012986 | |||
| 479 | nmdc:mga00v17_161319_c1 | |||
| 480 | nmdc:mga00v17_7467_c1 | |||
| 481 | nmdc:mga0sz30_93003_c1 | |||
| 482 | Ga0495655_0008130 | |||
| 483 | Ga0500644_0000143 | |||
| 484 | Ga0500593_000367 | |||
| 485 | Ga0501084_0013970 | |||
| 486 | Ga0501082_0010017 | |||
| 487 | Ga0466962_0018074 | |||
| 488 | 2643752084 | |||
| 489 | 2643785826 | |||
| 490 | 2643995773 | |||
| 491 | 2644091538 | |||
| 492 | 2644321341 | |||
| 493 | 2644680229 | |||
| 494 | 2730229680 | |||
| 495 | 2758226169 | |||
| 496 | 2774380486 | |||
| 497 | 2799184091 | |||
| 498 | 2852638772 | |||
| 499 | 2852647326 | |||
| 500 | 2852679261 | |||
| 501 | 2857721137 | |||
| 502 | 2857723850 | |||
| 503 | 2904512056 | |||
| 504 | 2908680973 | |||
| 505 | 2919072557 | |||
| 506 | 2928092214 | |||
| 507 | 2935391144 | |||
| 508 | 2945971802 | |||
| 509 | 2946044256 | |||
| 510 | 2946080899 | |||
| 511 | 2956940300 | |||
| 512 | 2974297115 | |||
| 513 | 2974326650 | |||
| 514 | 2977231351 | |||
| 515 | 2977240132 | |||
| 516 | 2977266574 | |||
| 517 | 2984545595 | |||
| 518 | 2984579116 | |||
| 519 | 2984581012 | |||
| 520 | 2990259990 | |||
| 521 | 3001121714 | |||
| 522 | 8004214271 | |||
| 523 | 8016257606 | |||
| 524 | 8025479469 | |||
| 525 | 8056449542 | |||
| 526 | 8056667074 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 7mpr-assembly1.cif.gz_A | brucella melitensis nrnc | 0.9023 | 44 | 203 |
| 2rhf-assembly1.cif.gz_A | d. radiodurans recq hrdc domain 3 | 0.9003 | 228 | 300 |
| 3cym-assembly1.cif.gz_A | crystal structure of protein bad_0989 from bifidobacterium adolescentis | 0.8945 | 11 | 400 |
| 7mpu-assembly1.cif.gz_A-2 | brucella melitensis nrnc bound to pgg | 0.8879 | 44 | 203 |
| 7mpm-assembly1.cif.gz_A | bartonella henselae nrnc bound to paa | 0.8876 | 44 | 203 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_I6XF17_15_224_3.30.420.10 | Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H | 0.9635 | 13 | 204 | 3.30.420.10 |
| 3cymA01 | Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H | 0.9548 | 11 | 203 | 3.30.420.10 |
| af_I6XF17_332_429_1.10.150.80 | Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;HRDC domain | 0.9197 | 313 | 403 | 1.10.150.80 |
| 1yt3A01 | Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H | 0.9012 | 23 | 204 | 3.30.420.10 |
| af_A0A1D8PDF4_132_438_3.30.420.10 | Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H | 0.8935 | 23 | 204 | 3.30.420.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A850CE81-F1-model_v4 | Ribonuclease D | 0.9749 | 22 | 187 |
GO:0003676
GO:0006139 GO:0008408 |
| AF-A0A4T0V3I0-F1-model_v4 | Ribonuclease D | 0.9664 | 7 | 404 |
GO:0000166
GO:0003676 GO:0006139 GO:0008408 |
| AF-A0A2T8F802-F1-model_v4 | Ribonuclease D | 0.9652 | 13 | 402 |
GO:0000166
GO:0003676 GO:0006139 GO:0008408 |
| AF-A0A7V8YKU7-F1-model_v4 | Ribonuclease D | 0.961 | 13 | 210 |
GO:0003676
GO:0006139 GO:0008408 |
| AF-A0A850CE81-F1-model_v4 | Ribonuclease D | 0.9579 | 22 | 187 |
GO:0003676
GO:0006139 GO:0008408 |