F371429

General Info

Members Datasets Scaffolds Average Seq Length
262 183 248 280

Family's Representative Sequence

Representative Sequence 3300049588|Ga0501072_0190471|Ga0501072_0190471_531_1376
Length 281
Sequence MLQRSVRANPVVTVGGVRFGNALPLALIAGPCALESREHALEMASALKEIAARLGVGLVFKTSFDKANRTSAASGRGLGLEAALPIFAEIREKTGLPVLTDVHEAAQCEAVAQAVDVLQIPAFLCRQTDLLVAAARTKRVVNVKKGQFLAPRDMTNVVAKITGEGNANVLATERGVSFGYNTLVSDMRALPIMAQETGAPVIFDATHSVQQPGGQGTSSGGERQFVPVLARAAAAVGVAGVFIETHQDPDRAPSDGPNMIPLKELEPLLKTLIALDRIAKQ

Samples

Sample ID Description Type Environment
1 2516143018 Ensifer sp. BR816 Isolate Nodule
2 2524023250 Niveispirillum irakense DSM 11586 Isolate Unclassified
3 2585427594 Rhizobium sp. YR528 Isolate Rhizosphere
4 2597490356 Azospirillum brasilense sp7 Isolate Unclassified
5 2643221558 Rhizobium sp. Root149 Isolate Unclassified
6 2643221643 Rhizobium sp. Root1220 Isolate Unclassified
7 2842333319 Skermanella aerolata SEMIA 4010 Isolate Nodule
8 2846952575 Azospirillum brasilense sp7 Isolate Unclassified
9 2848858292 Azospirillum brasilense Az39 Isolate Unclassified
10 2855872281 Sinorhizobium fredii PCH1 Isolate Nodule
11 2897803580 Azospirillum doebereinerae GSF71 Isolate Unclassified
12 2989349275 Shinella kummerowiae CCBAU 25048 Isolate Unclassified
13 3005409236 Rhizobium sp. P32RR-XVIII Isolate Rhizosphere
14 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
15 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
16 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
17 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
18 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
19 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
20 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
21 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
22 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
23 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
24 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
35 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
36 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
37 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
38 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
39 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
40 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
42 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
43 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
44 3300009987 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_213 metaG Metagenome Rhizosphere
45 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
46 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
47 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
48 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
49 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
50 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
51 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
52 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
53 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
54 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
56 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
83 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
85 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
86 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
87 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
88 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
89 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
90 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
91 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
92 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
93 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
94 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
95 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
96 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
97 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
98 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
99 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
100 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
101 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
102 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
103 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
104 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
105 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
106 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
107 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
108 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
109 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
110 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
111 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
112 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
113 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
114 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
115 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
116 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
117 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
118 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
119 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
120 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
121 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
122 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
123 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
124 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
125 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
126 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
127 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
128 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
129 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
130 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
131 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
132 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
133 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
134 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
135 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
136 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
148 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
149 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
150 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
151 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
152 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
153 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
154 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
155 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
156 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
157 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
158 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
160 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
161 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
162 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
163 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
164 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
165 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
166 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
167 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
168 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
169 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
170 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
171 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
172 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
173 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
174 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
175 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
176 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
177 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
178 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
179 3300053731 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere Metagenome Endosphere
180 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
181 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
182 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
183 643692032 Sinorhizobium fredii NGR234 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 94.27
Metatranscriptomes 0.38
Isolates 5.34

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.92
Nodule 1.53
Rhizoplane 2.67
Rhizosphere 78.63
Stem 0
Stem Tuber 0
Unclassified 7.25

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055531_10015488 3300003794 Bacteria 3354
2 Ga0070680_100001393 3300005336 Bacteria 17465
3 Ga0070691_10005588 3300005341 Bacteria 5722
4 Ga0070669_100005460 3300005353 Bacteria 9173
5 Ga0070674_100003569 3300005356 Bacteria 8746
6 Ga0070709_10113686 3300005434 Bacteria 1823
7 Ga0070714_100041888 3300005435 Bacteria 3866
8 Ga0070714_100407200 3300005435 Bacteria 1287
9 Ga0070713_100278588 3300005436 Bacteria 1533
10 Ga0070705_100013858 3300005440 Bacteria 4133
11 Ga0070700_100154201 3300005441 Bacteria 1574
12 Ga0070681_10000014 3300005458 Bacteria 132528
13 Ga0070681_10035966 3300005458 Bacteria 4974
14 Ga0070681_10169727 3300005458 Bacteria 2104
15 Ga0070681_10197609 3300005458 Bacteria 1930
16 Ga0070681_10315988 3300005458 Bacteria 1471
17 Ga0070679_100001034 3300005530 Bacteria 24273
18 Ga0070679_100036938 3300005530 Bacteria 4849
19 Ga0070696_100222889 3300005546 Bacteria 1415
20 Ga0070665_100651743 3300005548 Bacteria 1066
21 Ga0068855_100003700 3300005563 Bacteria 18695
22 Ga0068855_100150061 3300005563 Bacteria 2650
23 Ga0068856_100133829 3300005614 Bacteria 2484
24 Ga0068852_100047378 3300005616 Bacteria 3667
25 Ga0068852_100103213 3300005616 Bacteria 2578
26 Ga0068864_100510389 3300005618 Bacteria 1158
27 Ga0068861_100009228 3300005719 Bacteria 6805
28 Ga0068862_100155887 3300005844 Bacteria 2036
29 Ga0081538_10070702 3300005981 Bacteria 1925
30 Ga0070717_10233343 3300006028 Bacteria 1620
31 Ga0070716_100065530 3300006173 Bacteria 2116
32 Ga0070712_100358199 3300006175 Bacteria 1196
33 Ga0075431_100419421 3300006847 Bacteria 1338
34 Ga0105240_10000830 3300009093 Bacteria 55820
35 Ga0105240_10336859 3300009093 Bacteria 1715
36 Ga0111539_10000125 3300009094 Bacteria 86127
37 Ga0105247_10038143 3300009101 Bacteria 2932
38 Ga0105241_10127244 3300009174 Bacteria 2058
39 Ga0105237_10087453 3300009545 Bacteria 3106
40 Ga0105030_103444 3300009987 Bacteria 1362
41 Ga0105239_10002505 3300010375 Bacteria 23379
42 Ga0105239_10006654 3300010375 Bacteria 13369
43 Ga0105239_10025881 3300010375 Bacteria 6463
44 Ga0105239_10183107 3300010375 Bacteria 2344
45 Ga0157373_10254372 3300013100 Bacteria 1242
46 Ga0157370_10172025 3300013104 Bacteria 2013
47 Ga0157369_10020936 3300013105 Bacteria 7312
48 Ga0157369_10028235 3300013105 Bacteria 6211
49 Ga0157372_10027353 3300013307 Bacteria 6210
50 Ga0157372_10099153 3300013307 Bacteria 3323
51 Ga0157380_10033589 3300014326 Bacteria 3951
52 Ga0157380_10266797 3300014326 Bacteria 1558
53 Ga0182008_10028829 3300014497 Bacteria 2807
54 Ga0182008_10138657 3300014497 Bacteria 1216
55 Ga0213875_10011895 3300021388 Bacteria 4315
56 Ga0224712_10196076 3300022467 Bacteria 916
57 Ga0209676_1000019 3300025292 Bacteria 620012
58 Ga0209758_1000059 3300025297 Bacteria 328458
59 Ga0209758_1018517 3300025297 Bacteria 3406
60 Ga0209050_1008706 3300025298 Bacteria 5353
61 Ga0209050_1016638 3300025298 Bacteria 2992
62 Ga0209051_1026385 3300025303 Bacteria 2343
63 Ga0209257_1000629 3300025304 Bacteria 56718
64 Ga0207699_10241461 3300025906 Bacteria 1241
65 Ga0207707_10000001 3300025912 Bacteria 1212482
66 Ga0207707_10034396 3300025912 Bacteria 4433
67 Ga0207707_10080772 3300025912 Bacteria 2839
68 Ga0207707_10181076 3300025912 Bacteria 1840
69 Ga0207695_10000004 3300025913 Bacteria 1288665
70 Ga0207693_10079484 3300025915 Bacteria 2567
71 Ga0207660_10000551 3300025917 Bacteria 25165
72 Ga0207660_10133396 3300025917 Bacteria 1892
73 Ga0207660_10152929 3300025917 Bacteria 1774
74 Ga0207649_10043960 3300025920 Bacteria 2734
75 Ga0207652_10002756 3300025921 Bacteria 14756
76 Ga0207681_10026434 3300025923 Bacteria 3744
77 Ga0207694_10000014 3300025924 Bacteria 374435
78 Ga0207700_10065350 3300025928 Bacteria 2775
79 Ga0207664_10094692 3300025929 Bacteria 2455
80 Ga0207664_10465716 3300025929 Bacteria 1129
81 Ga0207644_10040894 3300025931 Bacteria 3278
82 Ga0207644_10306551 3300025931 Bacteria 1281
83 Ga0207669_10004897 3300025937 Bacteria 5949
84 Ga0207704_10023012 3300025938 Bacteria 3350
85 Ga0207665_10074646 3300025939 Bacteria 2321
86 Ga0207661_10287107 3300025944 Bacteria 1472
87 Ga0207667_10000116 3300025949 Bacteria 128218
88 Ga0207658_10089226 3300025986 Bacteria 2386
89 Ga0207639_10518646 3300026041 Bacteria 1091
90 Ga0207702_10022171 3300026078 Bacteria 5263
91 Ga0207674_10038954 3300026116 Bacteria 4929
92 Ga0207675_100018675 3300026118 Bacteria 6471
93 Ga0207698_10007264 3300026142 Bacteria 6940
94 Ga0207428_10000078 3300027907 Bacteria 136571
95 Ga0268265_10006433 3300028380 Bacteria 7962
96 Ga0265338_10000006 3300028800 Bacteria 570804
97 Ga0265338_10004555 3300028800 Bacteria 18659
98 Ga0265338_10072621 3300028800 Bacteria 2937
99 Ga0265324_10068071 3300029957 Bacteria 1214
100 Ga0265332_10046562 3300031238 Bacteria 1867
101 Ga0265325_10000023 3300031241 Bacteria 116475
102 Ga0265339_10008139 3300031249 Bacteria 6692
103 Ga0265339_10058771 3300031249 Bacteria 2076
104 Ga0265339_10068018 3300031249 Bacteria 1904
105 Ga0265331_10004670 3300031250 Bacteria 8484
106 Ga0265331_10041197 3300031250 Bacteria 2244
107 Ga0265327_10020436 3300031251 Bacteria 4033
108 Ga0307513_10524535 3300031456 Bacteria 899
109 Ga0265313_10004114 3300031595 Bacteria 11325
110 Ga0265314_10024932 3300031711 Bacteria 4522
111 Ga0265342_10004102 3300031712 Bacteria 11612
112 Ga0307516_10016783 3300031730 Bacteria 7646
113 Ga0307413_10093629 3300031824 Bacteria 1964
114 Ga0307409_100133094 3300031995 Bacteria 2129
115 Ga0307414_10183936 3300032004 Bacteria 1684
116 Ga0373957_0125320 3300035120 Bacteria 1042
117 Ga0373927_0072064 3300035695 Bacteria 2236
118 Ga0373927_0166080 3300035695 Bacteria 1446
119 Ga0373937_0029307 3300036401 Bacteria 4984
120 Ga0373937_0169592 3300036401 Bacteria 2048
121 Ga0395898_0018215 3300037466 Bacteria 7163
122 Ga0395905_0000325 3300037471 Bacteria 68813
123 Ga0436364_0812264 3300037853 Bacteria 26045
124 Ga0395901_0362554 3300038443 Bacteria 1494
125 Ga0436363_0090199 3300039450 Bacteria 1769
126 Ga0436363_0789846 3300039450 Bacteria 2564
127 Ga0451577_0230502 3300042876 Bacteria 1675
128 Ga0451576_0634043 3300045051 Bacteria 1123
129 Ga0495638_0000924 3300046460 Bacteria 29846
130 Ga0495582_0056793 3300046473 Bacteria 2158
131 Ga0495585_0089317 3300046492 Bacteria 1661
132 Ga0495631_0047809 3300046518 Bacteria 1877
133 Ga0495643_0054359 3300046522 Bacteria 2144
134 Ga0495652_0057971 3300046529 Bacteria 3282
135 Ga0495640_0086378 3300046533 Bacteria 2077
136 Ga0495609_0016784 3300046538 Bacteria 3410
137 Ga0495667_0023257 3300046559 Bacteria 4175
138 Ga0495634_0117847 3300046642 Bacteria 1702
139 Ga0495625_0018245 3300046660 Bacteria 5483
140 Ga0495635_0016294 3300046663 Bacteria 5190
141 Ga0495599_0133681 3300046678 Bacteria 1540
142 Ga0495599_0181204 3300046678 Bacteria 1298
143 Ga0495670_0088149 3300046691 Bacteria 1586
144 Ga0495680_0139282 3300047322 Bacteria 1776
145 Ga0495675_0063144 3300047444 Bacteria 2344
146 Ga0495686_0254793 3300047472 Bacteria 985
147 Ga0496103_0068182 3300048906 Bacteria 2223
148 Ga0496110_0077686 3300048913 Bacteria 2954
149 Ga0496112_0148477 3300048915 Bacteria 2312
150 Ga0496112_0162574 3300048915 Bacteria 2199
151 Ga0496113_0221176 3300048916 Bacteria 1509
152 Ga0496113_0232889 3300048916 Bacteria 1469
153 Ga0496115_0327922 3300048918 Bacteria 1251
154 Ga0496122_0000025 3300048925 Bacteria 362915
155 Ga0496122_0032312 3300048925 Bacteria 4332
156 Ga0496123_0000032 3300048926 Bacteria 285282
157 Ga0496124_0081011 3300048927 Bacteria 2670
158 Ga0496126_0094787 3300048929 Bacteria 2619
159 Ga0495682_0008726 3300049460 Bacteria 3989
160 Ga0501032_0002558 3300049569 Bacteria 14233
161 Ga0501033_0011516 3300049570 Bacteria 6768
162 Ga0501033_0131677 3300049570 Bacteria 1811
163 Ga0501034_0041355 3300049571 Bacteria 4663
164 Ga0501034_0051995 3300049571 Bacteria 4130
165 Ga0501034_0109473 3300049571 Bacteria 2753
166 Ga0501036_0066445 3300049572 Bacteria 3051
167 Ga0501036_0201053 3300049572 Bacteria 1676
168 Ga0501037_0000894 3300049573 Bacteria 22219
169 Ga0501038_0000009 3300049574 Bacteria 190794
170 Ga0501038_0003016 3300049574 Bacteria 15700
171 Ga0501039_0001785 3300049575 Bacteria 15903
172 Ga0501039_0268436 3300049575 Bacteria 1341
173 Ga0501043_0002670 3300049579 Bacteria 14960
174 Ga0501046_0001386 3300049580 Bacteria 23324
175 Ga0501047_0002597 3300049581 Bacteria 17196
176 Ga0501047_0003413 3300049581 Bacteria 15035
177 Ga0501047_0139205 3300049581 Bacteria 2306
178 Ga0501048_0052119 3300049582 Bacteria 2911
179 Ga0501067_0009781 3300049583 Bacteria 5307
180 Ga0501067_0009912 3300049583 Bacteria 5277
181 Ga0501067_0010339 3300049583 Bacteria 5164
182 Ga0501067_0023904 3300049583 Bacteria 3388
183 Ga0501069_0102962 3300049585 Bacteria 1622
184 Ga0501070_0032707 3300049586 Bacteria 4352
185 Ga0501070_0250658 3300049586 Bacteria 1448
186 Ga0501070_0301900 3300049586 Bacteria 1304
187 Ga0501070_0390220 3300049586 Bacteria 1127
188 Ga0501071_0167417 3300049587 Bacteria 1645
189 Ga0501072_0004215 3300049588 Bacteria 10906
190 Ga0501072_0190471 3300049588 Bacteria 1636
191 Ga0501073_0002646 3300049589 Bacteria 13420
192 Ga0501073_0019648 3300049589 Bacteria 4874
193 Ga0501073_0022905 3300049589 Bacteria 4492
194 Ga0501073_0112683 3300049589 Bacteria 1887
195 Ga0501073_0445911 3300049589 Bacteria 895
196 Ga0501074_0001553 3300049590 Bacteria 15529
197 Ga0501075_0112941 3300049591 Bacteria 2066
198 Ga0501079_0026679 3300049741 Bacteria 4429
199 Ga0501079_0160489 3300049741 Bacteria 1753
200 Ga0501080_0010521 3300049742 Bacteria 8471
201 Ga0501080_0041562 3300049742 Bacteria 4283
202 Ga0501080_0051276 3300049742 Bacteria 3839
203 Ga0501080_0060896 3300049742 Bacteria 3514
204 Ga0501080_0136786 3300049742 Bacteria 2267
205 Ga0501080_0234418 3300049742 Bacteria 1677
206 Ga0501080_0327371 3300049742 Bacteria 1386
207 Ga0501083_0073424 3300049744 Bacteria 2274
208 Ga0501083_0134836 3300049744 Bacteria 1618
209 Ga0501035_0002991 3300049822 Bacteria 16226
210 Ga0501035_0025308 3300049822 Bacteria 5441
211 Ga0501044_0004360 3300049823 Bacteria 15848
212 Ga0501044_0013642 3300049823 Bacteria 8782
213 Ga0501044_0049820 3300049823 Bacteria 4323
214 Ga0501044_0139818 3300049823 Bacteria 2410
215 Ga0501044_0292580 3300049823 Bacteria 1560
216 Ga0501044_0403043 3300049823 Bacteria 1280
217 nmdc:mga08y16_66_c1 3300050511 Bacteria 87732
218 nmdc:mga0rr50_381980_c1 3300050513 Bacteria 1188
219 nmdc:mga08x19_129659_c1 3300050514 Bacteria 1695
220 nmdc:mga08x19_264604_c1 3300050514 Bacteria 1189
221 nmdc:mga08x19_65326_c1 3300050514 Bacteria 2363
222 Ga0495601_0008203 3300053077 Bacteria 6160
223 Ga0500610_0016731 3300053079 Bacteria 3505
224 Ga0495595_0033147 3300053084 Bacteria 2329
225 Ga0495619_0009008 3300053085 Bacteria 6297
226 Ga0500578_0115007 3300053086 Bacteria 1694
227 Ga0500578_0295489 3300053086 Bacteria 962
228 Ga0500651_0104185 3300053093 Bacteria 1737
229 Ga0500651_0152608 3300053093 Bacteria 1386
230 Ga0500641_0002887 3300053096 Bacteria 6094
231 Ga0500650_0059838 3300053098 Bacteria 1778
232 Ga0500594_0023025 3300053118 Bacteria 1575
233 Ga0500595_000608 3300053119 Bacteria 21356
234 Ga0500658_0084652 3300053134 Bacteria 1362
235 Ga0500568_0005324 3300053139 Bacteria 6671
236 Ga0500568_0126982 3300053139 Bacteria 949
237 Ga0500588_0000657 3300053146 Bacteria 5777
238 Ga0500616_0005971 3300053153 Bacteria 8115
239 Ga0500616_0066177 3300053153 Bacteria 1856
240 Ga0500619_003480 3300053154 Bacteria 3235
241 Ga0500627_0041267 3300053158 Bacteria 1983
242 Ga0500609_007890 3300053731 Bacteria 1435
243 Ga0501084_0083318 3300054114 Bacteria 2684
244 Ga0501082_0005961 3300060353 Bacteria 10571
245 Ga0501082_0009903 3300060353 Bacteria 8215
246 Ga0501082_0054007 3300060353 Bacteria 3463
247 Ga0501082_0206295 3300060353 Bacteria 1710
248 Ga0530510_0360741 3300061734 Bacteria 1092

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049589 Ga0501073_0445911 Ga0501073_0445911_27_746 238
2 3300028800 Ga0265338_10072621 Ga0265338_100726214 254
3 3300032004 Ga0307414_10183936 Ga0307414_101839362 255
4 3300009987 Ga0105030_103444 Ga0105030_1034442 258
5 3300005458 Ga0070681_10197609 Ga0070681_101976092 259
6 3300025912 Ga0207707_10181076 Ga0207707_101810763 259
7 3300026116 Ga0207674_10038954 Ga0207674_100389544 259
8 3300025986 Ga0207658_10089226 Ga0207658_100892263 260
9 3300050514 nmdc:mga08x19_264604_c1 nmdc:mga08x19_264604_c1_51_893 262
10 3300038443 Ga0395901_0362554 Ga0395901_0362554_240_1079 263
11 3300050514 nmdc:mga08x19_129659_c1 nmdc:mga08x19_129659_c1_85_927 263
12 3300031995 Ga0307409_100133094 Ga0307409_1001330942 264
13 3300036401 Ga0373937_0029307 Ga0373937_0029307_3772_4611 264
14 3300028800 Ga0265338_10004555 Ga0265338_1000455522 265
15 3300029957 Ga0265324_10068071 Ga0265324_100680712 265
16 3300031249 Ga0265339_10058771 Ga0265339_100587713 265
17 3300048929 Ga0496126_0094787 Ga0496126_0094787_1003_1842 265
18 3300049572 Ga0501036_0201053 Ga0501036_0201053_664_1503 269
19 3300049591 Ga0501075_0112941 Ga0501075_0112941_932_1771 269
20 3300049742 Ga0501080_0327371 Ga0501080_0327371_289_1134 269
21 3300061734 Ga0530510_0360741 Ga0530510_0360741_88_927 269
22 3300049571 Ga0501034_0051995 Ga0501034_0051995_282_1127 271
23 iso_pu_bacteria 2516143018 2516209225 271
24 iso_pu_bacteria 2597490356 2599101379 271
25 iso_pu_bacteria 2846952575 2846953897 271
26 iso_pu_bacteria 2848858292 2848859917 271
27 iso_pu_bacteria 2855872281 2855874262 271
28 iso_pu_bacteria 2897803580 2897809861 271
29 iso_pu_bacteria 2989349275 2989352901 271
30 iso_pu_bacteria 643692032 643825484 271
31 iso_pu_bacteria 2585427594 2585845782 272
32 iso_pu_bacteria 3005409236 3005409663 272
33 iso_pu_bacteria 2643221643 2644239255 273
34 3300025931 Ga0207644_10306551 Ga0207644_103065512 274
35 iso_pu_bacteria 2524023250 2524610823 274
36 iso_pu_bacteria 2643221558 2643811831 274
37 3300046460 Ga0495638_0000924 Ga0495638_0000924_26770_27612 275
38 3300046492 Ga0495585_0089317 Ga0495585_0089317_516_1358 275
39 3300046518 Ga0495631_0047809 Ga0495631_0047809_348_1190 275
40 3300046522 Ga0495643_0054359 Ga0495643_0054359_1061_1903 275
41 3300046538 Ga0495609_0016784 Ga0495609_0016784_2212_3054 275
42 3300046660 Ga0495625_0018245 Ga0495625_0018245_4212_5054 275
43 3300046691 Ga0495670_0088149 Ga0495670_0088149_319_1161 275
44 3300048925 Ga0496122_0032312 Ga0496122_0032312_2874_3701 275
45 3300049588 Ga0501072_0190471 Ga0501072_0190471_531_1376 275
46 3300053079 Ga0500610_0016731 Ga0500610_0016731_54_896 275
47 3300053098 Ga0500650_0059838 Ga0500650_0059838_574_1416 275
48 3300053118 Ga0500594_0023025 Ga0500594_0023025_327_1169 275
49 3300053139 Ga0500568_0005324 Ga0500568_0005324_4976_5818 275
50 3300053158 Ga0500627_0041267 Ga0500627_0041267_295_1137 275
51 3300005441 Ga0070700_100154201 Ga0070700_1001542012 276
52 3300005548 Ga0070665_100651743 Ga0070665_1006517432 276
53 3300013307 Ga0157372_10027353 Ga0157372_100273532 276
54 3300013307 Ga0157372_10099153 Ga0157372_100991533 276
55 3300031249 Ga0265339_10068018 Ga0265339_100680182 276
56 3300031250 Ga0265331_10004670 Ga0265331_100046706 276
57 3300037471 Ga0395905_0000325 Ga0395905_0000325_9212_10057 276
58 3300048925 Ga0496122_0000025 Ga0496122_0000025_320762_321610 276
59 3300048926 Ga0496123_0000032 Ga0496123_0000032_42603_43451 276
60 3300048927 Ga0496124_0081011 Ga0496124_0081011_35_883 276
61 3300049586 Ga0501070_0390220 Ga0501070_0390220_227_1072 276
62 3300049744 Ga0501083_0073424 Ga0501083_0073424_15_860 276
63 3300060353 Ga0501082_0005961 Ga0501082_0005961_6017_6862 276
64 3300005341 Ga0070691_10005588 Ga0070691_100055885 277
65 3300005458 Ga0070681_10315988 Ga0070681_103159883 277
66 3300009093 Ga0105240_10336859 Ga0105240_103368592 277
67 3300013104 Ga0157370_10172025 Ga0157370_101720253 277
68 3300022467 Ga0224712_10196076 Ga0224712_101960761 277
69 3300025917 Ga0207660_10133396 Ga0207660_101333961 277
70 3300025944 Ga0207661_10287107 Ga0207661_102871071 277
71 3300035695 Ga0373927_0166080 Ga0373927_0166080_545_1393 277
72 3300049571 Ga0501034_0109473 Ga0501034_0109473_1190_2029 277
73 3300049581 Ga0501047_0003413 Ga0501047_0003413_1656_2495 277
74 3300049583 Ga0501067_0009912 Ga0501067_0009912_4263_5102 277
75 3300049583 Ga0501067_0023904 Ga0501067_0023904_1595_2434 277
76 3300049588 Ga0501072_0004215 Ga0501072_0004215_1042_1881 277
77 3300049589 Ga0501073_0019648 Ga0501073_0019648_2185_3024 277
78 3300049741 Ga0501079_0026679 Ga0501079_0026679_3304_4143 277
79 3300049741 Ga0501079_0160489 Ga0501079_0160489_118_957 277
80 3300049742 Ga0501080_0051276 Ga0501080_0051276_1122_1961 277
81 3300049744 Ga0501083_0134836 Ga0501083_0134836_398_1237 277
82 3300049822 Ga0501035_0025308 Ga0501035_0025308_3826_4665 277
83 3300054114 Ga0501084_0083318 Ga0501084_0083318_1670_2509 277
84 3300005336 Ga0070680_100001393 Ga0070680_1000013938 278
85 3300005440 Ga0070705_100013858 Ga0070705_1000138584 278
86 3300005458 Ga0070681_10000014 Ga0070681_1000001445 278
87 3300005458 Ga0070681_10169727 Ga0070681_101697273 278
88 3300005530 Ga0070679_100001034 Ga0070679_1000010349 278
89 3300010375 Ga0105239_10025881 Ga0105239_100258814 278
90 3300025912 Ga0207707_10000001 Ga0207707_10000001705 278
91 3300025912 Ga0207707_10080772 Ga0207707_100807722 278
92 3300025917 Ga0207660_10000551 Ga0207660_1000055124 278
93 3300025921 Ga0207652_10002756 Ga0207652_100027569 278
94 3300028800 Ga0265338_10000006 Ga0265338_10000006251 278
95 3300031238 Ga0265332_10046562 Ga0265332_100465622 278
96 3300031241 Ga0265325_10000023 Ga0265325_1000002320 278
97 3300031249 Ga0265339_10008139 Ga0265339_100081393 278
98 3300031250 Ga0265331_10041197 Ga0265331_100411972 278
99 3300031595 Ga0265313_10004114 Ga0265313_100041144 278
100 3300031711 Ga0265314_10024932 Ga0265314_100249324 278
101 3300031712 Ga0265342_10004102 Ga0265342_100041025 278
102 3300037466 Ga0395898_0018215 Ga0395898_0018215_3961_4797 278
103 3300042876 Ga0451577_0230502 Ga0451577_0230502_813_1649 278
104 3300048918 Ga0496115_0327922 Ga0496115_0327922_145_999 278
105 3300049570 Ga0501033_0131677 Ga0501033_0131677_891_1733 278
106 3300049571 Ga0501034_0041355 Ga0501034_0041355_1748_2590 278
107 3300049574 Ga0501038_0000009 Ga0501038_0000009_39302_40138 278
108 3300049575 Ga0501039_0268436 Ga0501039_0268436_356_1198 278
109 3300049581 Ga0501047_0139205 Ga0501047_0139205_1437_2279 278
110 3300049742 Ga0501080_0041562 Ga0501080_0041562_1081_1935 278
111 3300049742 Ga0501080_0136786 Ga0501080_0136786_1131_1973 278
112 3300049742 Ga0501080_0234418 Ga0501080_0234418_215_1057 278
113 3300049823 Ga0501044_0004360 Ga0501044_0004360_11820_12674 278
114 3300049823 Ga0501044_0139818 Ga0501044_0139818_117_959 278
115 3300053154 Ga0500619_003480 Ga0500619_003480_1555_2397 278
116 3300060353 Ga0501082_0206295 Ga0501082_0206295_850_1692 278
117 3300005563 Ga0068855_100150061 Ga0068855_1001500612 279
118 3300005616 Ga0068852_100103213 Ga0068852_1001032132 279
119 3300009174 Ga0105241_10127244 Ga0105241_101272442 279
120 3300009545 Ga0105237_10087453 Ga0105237_100874533 279
121 3300010375 Ga0105239_10002505 Ga0105239_100025055 279
122 3300013105 Ga0157369_10028235 Ga0157369_100282353 279
123 3300021388 Ga0213875_10011895 Ga0213875_100118951 279
124 3300025931 Ga0207644_10040894 Ga0207644_100408942 279
125 3300026041 Ga0207639_10518646 Ga0207639_105186462 279
126 3300036401 Ga0373937_0169592 Ga0373937_0169592_1055_1900 279
127 3300037853 Ga0436364_0812264 Ga0436364_0812264_2801_3640 279
128 3300046529 Ga0495652_0057971 Ga0495652_0057971_1290_2135 279
129 3300046678 Ga0495599_0133681 Ga0495599_0133681_351_1196 279
130 3300047444 Ga0495675_0063144 Ga0495675_0063144_1427_2272 279
131 3300053153 Ga0500616_0066177 Ga0500616_0066177_330_1205 279
132 iso_pu_bacteria 2842333319 2842333381 279
133 3300005434 Ga0070709_10113686 Ga0070709_101136862 280
134 3300005435 Ga0070714_100041888 Ga0070714_1000418881 280
135 3300005435 Ga0070714_100407200 Ga0070714_1004072001 280
136 3300005436 Ga0070713_100278588 Ga0070713_1002785882 280
137 3300005563 Ga0068855_100003700 Ga0068855_10000370017 280
138 3300005614 Ga0068856_100133829 Ga0068856_1001338292 280
139 3300005616 Ga0068852_100047378 Ga0068852_1000473783 280
140 3300006028 Ga0070717_10233343 Ga0070717_102333432 280
141 3300006175 Ga0070712_100358199 Ga0070712_1003581991 280
142 3300009093 Ga0105240_10000830 Ga0105240_1000083016 280
143 3300009101 Ga0105247_10038143 Ga0105247_100381432 280
144 3300010375 Ga0105239_10006654 Ga0105239_100066549 280
145 3300013105 Ga0157369_10020936 Ga0157369_100209366 280
146 3300014497 Ga0182008_10028829 Ga0182008_100288292 280
147 3300025906 Ga0207699_10241461 Ga0207699_102414612 280
148 3300025913 Ga0207695_10000004 Ga0207695_10000004937 280
149 3300025915 Ga0207693_10079484 Ga0207693_100794842 280
150 3300025920 Ga0207649_10043960 Ga0207649_100439603 280
151 3300025924 Ga0207694_10000014 Ga0207694_1000001421 280
152 3300025928 Ga0207700_10065350 Ga0207700_100653502 280
153 3300025929 Ga0207664_10094692 Ga0207664_100946922 280
154 3300025929 Ga0207664_10465716 Ga0207664_104657162 280
155 3300025939 Ga0207665_10074646 Ga0207665_100746461 280
156 3300025949 Ga0207667_10000116 Ga0207667_1000011644 280
157 3300026078 Ga0207702_10022171 Ga0207702_100221714 280
158 3300026142 Ga0207698_10007264 Ga0207698_100072644 280
159 3300031730 Ga0307516_10016783 Ga0307516_100167833 280
160 3300039450 Ga0436363_0789846 Ga0436363_0789846_889_1731 280
161 3300046473 Ga0495582_0056793 Ga0495582_0056793_361_1209 280
162 3300048915 Ga0496112_0148477 Ga0496112_0148477_219_1064 280
163 3300048916 Ga0496113_0232889 Ga0496113_0232889_531_1376 280
164 3300049460 Ga0495682_0008726 Ga0495682_0008726_1870_2730 280
165 3300049589 Ga0501073_0112683 Ga0501073_0112683_30_872 280
166 3300050513 nmdc:mga0rr50_381980_c1 nmdc:mga0rr50_381980_c1_224_1069 280
167 3300050514 nmdc:mga08x19_65326_c1 nmdc:mga08x19_65326_c1_1191_2036 280
168 3300053086 Ga0500578_0295489 Ga0500578_0295489_29_901 280
169 3300005458 Ga0070681_10035966 Ga0070681_100359663 281
170 3300005530 Ga0070679_100036938 Ga0070679_1000369382 281
171 3300005618 Ga0068864_100510389 Ga0068864_1005103892 281
172 3300006173 Ga0070716_100065530 Ga0070716_1000655301 281
173 3300006847 Ga0075431_100419421 Ga0075431_1004194212 281
174 3300014497 Ga0182008_10138657 Ga0182008_101386571 281
175 3300025912 Ga0207707_10034396 Ga0207707_100343962 281
176 3300025917 Ga0207660_10152929 Ga0207660_101529292 281
177 3300031251 Ga0265327_10020436 Ga0265327_100204363 281
178 3300039450 Ga0436363_0090199 Ga0436363_0090199_747_1604 281
179 3300010375 Ga0105239_10183107 Ga0105239_101831071 282
180 3300013100 Ga0157373_10254372 Ga0157373_102543722 282
181 3300035120 Ga0373957_0125320 Ga0373957_0125320_62_913 282
182 3300046533 Ga0495640_0086378 Ga0495640_0086378_774_1625 282
183 3300046559 Ga0495667_0023257 Ga0495667_0023257_1964_2815 282
184 3300046642 Ga0495634_0117847 Ga0495634_0117847_676_1527 282
185 3300046663 Ga0495635_0016294 Ga0495635_0016294_2719_3570 282
186 3300046678 Ga0495599_0181204 Ga0495599_0181204_210_1061 282
187 3300047322 Ga0495680_0139282 Ga0495680_0139282_553_1404 282
188 3300048906 Ga0496103_0068182 Ga0496103_0068182_517_1368 282
189 3300048913 Ga0496110_0077686 Ga0496110_0077686_1762_2613 282
190 3300048915 Ga0496112_0162574 Ga0496112_0162574_1276_2127 282
191 3300048916 Ga0496113_0221176 Ga0496113_0221176_151_1002 282
192 3300049585 Ga0501069_0102962 Ga0501069_0102962_531_1382 282
193 3300053077 Ga0495601_0008203 Ga0495601_0008203_4245_5096 282
194 3300053084 Ga0495595_0033147 Ga0495595_0033147_402_1253 282
195 3300053085 Ga0495619_0009008 Ga0495619_0009008_1854_2705 282
196 3300003794 Ga0055531_10015488 Ga0055531_100154882 283
197 3300005353 Ga0070669_100005460 Ga0070669_1000054606 283
198 3300005356 Ga0070674_100003569 Ga0070674_1000035694 283
199 3300005546 Ga0070696_100222889 Ga0070696_1002228891 283
200 3300005719 Ga0068861_100009228 Ga0068861_1000092286 283
201 3300005844 Ga0068862_100155887 Ga0068862_1001558872 283
202 3300005981 Ga0081538_10070702 Ga0081538_100707022 283
203 3300009094 Ga0111539_10000125 Ga0111539_1000012568 283
204 3300014326 Ga0157380_10033589 Ga0157380_100335892 283
205 3300014326 Ga0157380_10266797 Ga0157380_102667972 283
206 3300025292 Ga0209676_1000019 Ga0209676_1000019286 283
207 3300025297 Ga0209758_1000059 Ga0209758_1000059167 283
208 3300025297 Ga0209758_1018517 Ga0209758_10185175 283
209 3300025298 Ga0209050_1008706 Ga0209050_10087067 283
210 3300025298 Ga0209050_1016638 Ga0209050_10166382 283
211 3300025303 Ga0209051_1026385 Ga0209051_10263854 283
212 3300025304 Ga0209257_1000629 Ga0209257_100062914 283
213 3300025923 Ga0207681_10026434 Ga0207681_100264342 283
214 3300025937 Ga0207669_10004897 Ga0207669_100048973 283
215 3300025938 Ga0207704_10023012 Ga0207704_100230122 283
216 3300026118 Ga0207675_100018675 Ga0207675_1000186756 283
217 3300027907 Ga0207428_10000078 Ga0207428_10000078115 283
218 3300028380 Ga0268265_10006433 Ga0268265_100064339 283
219 3300031456 Ga0307513_10524535 Ga0307513_105245351 283
220 3300031824 Ga0307413_10093629 Ga0307413_100936292 283
221 3300035695 Ga0373927_0072064 Ga0373927_0072064_17_892 283
222 3300045051 Ga0451576_0634043 Ga0451576_0634043_106_957 283
223 3300047472 Ga0495686_0254793 Ga0495686_0254793_22_873 283
224 3300049569 Ga0501032_0002558 Ga0501032_0002558_3020_3871 283
225 3300049570 Ga0501033_0011516 Ga0501033_0011516_4292_5143 283
226 3300049572 Ga0501036_0066445 Ga0501036_0066445_1985_2836 283
227 3300049573 Ga0501037_0000894 Ga0501037_0000894_11896_12747 283
228 3300049574 Ga0501038_0003016 Ga0501038_0003016_11922_12773 283
229 3300049575 Ga0501039_0001785 Ga0501039_0001785_11344_12195 283
230 3300049579 Ga0501043_0002670 Ga0501043_0002670_12351_13202 283
231 3300049580 Ga0501046_0001386 Ga0501046_0001386_13234_14085 283
232 3300049581 Ga0501047_0002597 Ga0501047_0002597_27_896 283
233 3300049582 Ga0501048_0052119 Ga0501048_0052119_182_1033 283
234 3300049583 Ga0501067_0009781 Ga0501067_0009781_3726_4577 283
235 3300049583 Ga0501067_0010339 Ga0501067_0010339_161_1030 283
236 3300049586 Ga0501070_0032707 Ga0501070_0032707_1457_2308 283
237 3300049586 Ga0501070_0250658 Ga0501070_0250658_531_1385 283
238 3300049586 Ga0501070_0301900 Ga0501070_0301900_140_1009 283
239 3300049587 Ga0501071_0167417 Ga0501071_0167417_49_900 283
240 3300049589 Ga0501073_0002646 Ga0501073_0002646_3697_4548 283
241 3300049589 Ga0501073_0022905 Ga0501073_0022905_26_895 283
242 3300049590 Ga0501074_0001553 Ga0501074_0001553_1339_2190 283
243 3300049742 Ga0501080_0010521 Ga0501080_0010521_7145_7996 283
244 3300049742 Ga0501080_0060896 Ga0501080_0060896_228_1097 283
245 3300049822 Ga0501035_0002991 Ga0501035_0002991_9011_9862 283
246 3300049823 Ga0501044_0013642 Ga0501044_0013642_7346_8215 283
247 3300049823 Ga0501044_0049820 Ga0501044_0049820_3256_4107 283
248 3300049823 Ga0501044_0292580 Ga0501044_0292580_121_972 283
249 3300049823 Ga0501044_0403043 Ga0501044_0403043_97_948 283
250 3300050511 nmdc:mga08y16_66_c1 nmdc:mga08y16_66_c1_80066_80917 283
251 3300053086 Ga0500578_0115007 Ga0500578_0115007_460_1311 283
252 3300053093 Ga0500651_0104185 Ga0500651_0104185_140_991 283
253 3300053093 Ga0500651_0152608 Ga0500651_0152608_358_1209 283
254 3300053096 Ga0500641_0002887 Ga0500641_0002887_2345_3196 283
255 3300053119 Ga0500595_000608 Ga0500595_000608_169_1020 283
256 3300053134 Ga0500658_0084652 Ga0500658_0084652_112_963 283
257 3300053139 Ga0500568_0126982 Ga0500568_0126982_88_939 283
258 3300053146 Ga0500588_0000657 Ga0500588_0000657_399_1355 283
259 3300053153 Ga0500616_0005971 Ga0500616_0005971_2564_3415 283
260 3300053731 Ga0500609_007890 Ga0500609_007890_20_961 283
261 3300060353 Ga0501082_0009903 Ga0501082_0009903_1089_1940 283
262 3300060353 Ga0501082_0054007 Ga0501082_0054007_176_1027 283

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00793

DAHP_synth_1

DAHP synthetase I family

5

281

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
3fs2-assembly1.cif.gz_A crystal structure of 2-dehydro-3-deoxyphosphooctonate aldolase from bruciella melitensis at 1.85a resolution 0.975 2 275
4lu0-assembly1.cif.gz_D crystal structure of 2-keto-3-deoxy-d-manno-octulosonate-8-phosphate synthase from pseudomonas aeruginosa. 0.9714 5 277
3fs2-assembly1.cif.gz_A crystal structure of 2-dehydro-3-deoxyphosphooctonate aldolase from bruciella melitensis at 1.85a resolution 0.9676 2 275
3tmq-assembly1.cif.gz_A crystal structure of a 2-dehydro-3-deoxyphosphooctonate aldolase from burkholderia pseudomallei in complex with d-arabinose-5-phosphate 0.9669 5 281
4lu0-assembly1.cif.gz_B crystal structure of 2-keto-3-deoxy-d-manno-octulosonate-8-phosphate synthase from pseudomonas aeruginosa. 0.9667 3 279
ID Description Score Start End Superfamily
1fwtA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9635 18 280 3.20.20.70
1fwtA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9599 18 280 3.20.20.70
1o60D00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9505 3 280 3.20.20.70
1o60D00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9434 3 280 3.20.20.70
3t4cC00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9053 5 277 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A358HSL4-F1-model_v4 3-deoxy-8-phosphooctulonate synthase (EC 2.5.1.55) 0.9945 129 279 GO:0005737
GO:0008676
GO:0009103
AF-A0A3D4TKA2-F1-model_v4 3-deoxy-8-phosphooctulonate synthase (EC 2.5.1.55) 0.9927 140 254 GO:0005737
GO:0008676
GO:0009103
AF-A0A845RWX3-F1-model_v4 3-deoxy-8-phosphooctulonate synthase (EC 2.5.1.55) 0.9901 137 276 GO:0005737
GO:0008676
GO:0009103
AF-A0A7V2NCW1-F1-model_v4 3-deoxy-8-phosphooctulonate synthase (EC 2.5.1.55) 0.9894 128 275 GO:0005737
GO:0008676
GO:0009103
AF-A0A7C3JW73-F1-model_v4 3-deoxy-8-phosphooctulonate synthase (EC 2.5.1.55) 0.9891 137 275 GO:0005737
GO:0008676
GO:0009103

Feature Viewer

pLDDT pTM Quality
91.79 0.92 High
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Predicted Structure (AlphaFold2)

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