F370431

General Info

Members Datasets Scaffolds Average Seq Length
261 198 248 1011

Family's Representative Sequence

Representative Sequence 3300031344|Ga0265316_10006360|Ga0265316_100063606
Length 1067
Sequence MLQAIVYFSLRFRGIVVALACLLLGYGIYVAAHAKLDVFPNFVPPEVTVQTECPGLAPEQVETLVTRPVESAINGLGNQESLRSESIQGLSVITVVFTEGTNVLEARQLLAEKLGATAGSLPAGVAAPKMSPLTSSTMDLLKIGLLSDQLTPMQLRTFANWTLRPRLLAVSGVADCKIFGGEVRQWQIQVHPNLLVAHNLALSDVLGAARLASGVRGAGFIENENQRVVLQTEGQTLTAEALGAIVVTTGTNGVPVRLRDVATVAEGGEPKFGDSLIMGRPGVLVTMASQYGANTMEVTVALEQALADLKPVFAREGIQLFSRLHRPATFIEAAVHNIEHSLLVGAALVAVVLLLFLGHFRTAFISLTAIPLALLTAVIVLDRLGVTLNTITLGGLAIALGEVVDDAIIGVENILRRLRENAAKAQPRPALPVILDASIEVRTPVVFATAVVTLVFLPVLTLSGLQGSFFAPLAQSYILAILASLAVALTLTPALALIFFGRGTGNTEMPWLQRVLRRAYERVLTWVSQHHPFVLVGVVFLFCGLALSRLPFLGGEFLPEFREGHFVLGMSTAPGAALGETLRIGRYISAELLKNPNIATVEQQVGRAELGEDAWPPHRSEFHVELKPDLPGKVQAQVEDEIRDLLKNVPGIQYEVLTFLGDRIGETIGGETAPIVVNLFGEDLDALDAKAAEVSKALSDLKAEDVQVKSPPGAPRIGIRLRSDRLTGLGFRPVEVLEAVQTAYEGQVVGQVFQENQTTDVAVILDAASRRDLEGVGALLLTSATGLRVPLREIADVYLTDGRSSILHEGARRRQTVTCSPPTGRDVDSFVAEARDAIAKKVNLPAGMYVEYAGAAEAKKAATRELLLHGAIALVGILLLLAVAVGRMGEGVDEDRKPSWAGRMLSTVIGPQWPNLCLVLINLPLALAGGVLAVYIMSLLGAGNLSMGAMVGFVTLFGVTTRNSILLISHYEHLVAVDGEPWNLATAIRGASERLVPILMTASVTALGLLPLALGSGEAGREIEGPMAQVILGGLATSAALNLLVLPTLAVRFGRFTTAKKQPGLSG

Samples

Sample ID Description Type Environment
1 2582581279 Caulobacter henricii OK261 Isolate Rhizosphere
2 2582581305 Rhizorhabdus wittichii YR128 Isolate Rhizosphere
3 2643221552 Caulobacter sp. Root1472 Isolate Unclassified
4 2738541275 Novosphingobium sp. GV027 Isolate Unclassified
5 2738541301 Novosphingobium sp. GV079 Isolate Unclassified
6 2738541304 Novosphingobium sp. GV061 Isolate Unclassified
7 2738543022 Novosphingobium sp. GV055 Isolate Unclassified
8 2738543033 Novosphingobium sp. GV064 Isolate Unclassified
9 2739367664 Novosphingobium sp. GV002 Isolate Unclassified
10 2739367865 Novosphingobium sp. GV013 Isolate Unclassified
11 2919138771 Novosphingobium sp. 1748 Isolate Rhizosphere
12 2928100450 Novosphingobium sp. 1529 Isolate Rhizosphere
13 2928959182 Novosphingobium capsulatum 1057 Isolate Unclassified
14 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
15 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
16 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
17 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
18 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
19 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
20 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
21 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
22 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
23 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
24 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
25 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
26 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
27 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
28 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
29 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
30 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
31 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
32 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
33 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
34 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
35 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
36 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
37 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
38 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
39 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
40 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
41 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
42 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
43 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
44 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
45 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
46 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
47 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
48 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
49 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
50 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
51 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
53 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
54 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
55 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
56 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
57 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
58 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
59 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
60 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
61 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
62 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
63 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
64 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
65 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
66 3300015684 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.2_F02 Metagenome Unclassified
67 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
68 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
69 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
99 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
100 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
101 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
102 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
103 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
104 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
105 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
106 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
107 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
108 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
109 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
110 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
111 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
112 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
113 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
114 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
115 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
116 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
117 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
118 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
119 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
120 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
121 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
122 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
123 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
124 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
125 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
126 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
127 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
128 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
129 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
130 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
131 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
132 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
133 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
134 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
135 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
136 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
137 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
138 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
139 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
140 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
141 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
142 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
143 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
144 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
145 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
146 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
147 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
148 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
149 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
150 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
151 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
152 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
153 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
154 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
155 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
156 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
157 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
158 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
159 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
160 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
161 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
162 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
163 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
164 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
165 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
166 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
167 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
168 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
169 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
170 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
171 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
172 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
173 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
174 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
175 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
176 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
177 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
178 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
179 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
180 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
181 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
182 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
183 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
184 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
185 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
186 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
187 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
188 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
189 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
190 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
191 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
192 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
193 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
194 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
195 3300053723 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 endosphere Metagenome Endosphere
196 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere
197 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere
198 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.02
Metatranscriptomes 0
Isolates 4.98

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.96
Nodule 0
Rhizoplane 4.98
Rhizosphere 74.71
Stem 0
Stem Tuber 0
Unclassified 10.34

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24741J21665_1000102 3300001915 Bacteria 22417
2 JGI24739J22299_10000648 3300001989 Bacteria 12506
3 JGI24735J21928_10001224 3300002067 Bacteria 9121
4 JGI24748J21848_1000052 3300002074 Bacteria 50713
5 JGI24034J26672_10000031 3300002239 Bacteria 93812
6 rootH2_10038923 3300003320 Bacteria 9542
7 rootH1_10074774 3300003323 Bacteria 24917
8 rootH1_10084515 3300003323 Bacteria 8674
9 Ga0065704_10000332 3300005289 Bacteria 32777
10 Ga0065707_10084271 3300005295 Bacteria 7425
11 Ga0070683_100001543 3300005329 Bacteria 17823
12 Ga0070683_100015123 3300005329 Bacteria 6773
13 Ga0070690_100000010 3300005330 Bacteria 103492
14 Ga0070666_10000006 3300005335 Bacteria 319173
15 Ga0070660_100014888 3300005339 Bacteria 5614
16 Ga0070689_100010909 3300005340 Bacteria 6492
17 Ga0070669_100000050 3300005353 Bacteria 115079
18 Ga0070669_100000076 3300005353 Bacteria 97334
19 Ga0070671_100000804 3300005355 Bacteria 22691
20 Ga0070667_100000864 3300005367 Bacteria 28131
21 Ga0070667_100015346 3300005367 Bacteria 6333
22 Ga0070713_100027337 3300005436 Bacteria 4489
23 Ga0070681_10010861 3300005458 Bacteria 9001
24 Ga0070699_100007662 3300005518 Bacteria 9387
25 Ga0070679_100025580 3300005530 Bacteria 5795
26 Ga0068853_100000012 3300005539 Bacteria 228770
27 Ga0068853_100038676 3300005539 Bacteria 4064
28 Ga0070686_100000042 3300005544 Bacteria 103828
29 Ga0070686_100012070 3300005544 Bacteria 4914
30 Ga0070665_100000019 3300005548 Bacteria 413972
31 Ga0070665_100000290 3300005548 Bacteria 79561
32 Ga0070665_100002632 3300005548 Bacteria 19565
33 Ga0070665_100003090 3300005548 Bacteria 17922
34 Ga0070704_100008707 3300005549 Bacteria 6103
35 Ga0068855_100011920 3300005563 Bacteria 10509
36 Ga0068855_100025330 3300005563 Bacteria 7099
37 Ga0068857_100001201 3300005577 Bacteria 20213
38 Ga0068856_100006112 3300005614 Bacteria 11822
39 Ga0068856_100022799 3300005614 Bacteria 6088
40 Ga0068859_100013097 3300005617 Bacteria 8333
41 Ga0068864_100018376 3300005618 Bacteria 5840
42 Ga0068861_100000534 3300005719 Bacteria 22295
43 Ga0068863_100000069 3300005841 Bacteria 116525
44 Ga0068860_100000014 3300005843 Bacteria 319437
45 Ga0068862_100002295 3300005844 Bacteria 17093
46 Ga0081455_10000997 3300005937 Bacteria 35914
47 Ga0075367_10000555 3300006178 Bacteria 14168
48 Ga0075429_100047840 3300006880 Bacteria 3720
49 Ga0097620_100013097 3300006931 Bacteria 8333
50 Ga0105250_10000005 3300009092 Bacteria 422580
51 Ga0105240_10002417 3300009093 Bacteria 30006
52 Ga0105240_10033582 3300009093 Bacteria 6625
53 Ga0105241_10004854 3300009174 Bacteria 9916
54 Ga0105248_10002135 3300009177 Bacteria 21881
55 Ga0105248_10029720 3300009177 Bacteria 6098
56 Ga0105238_10004426 3300009551 Bacteria 13932
57 Ga0105238_10020178 3300009551 Bacteria 6783
58 Ga0105238_10044588 3300009551 Bacteria 4483
59 Ga0105249_10000035 3300009553 Bacteria 201325
60 Ga0105239_10007806 3300010375 Bacteria 12240
61 Ga0157373_10003461 3300013100 Bacteria 11939
62 Ga0157369_10008715 3300013105 Bacteria 11629
63 Ga0163162_10025255 3300013306 Bacteria 5871
64 Ga0163162_10035729 3300013306 Bacteria 4951
65 Ga0157372_10008351 3300013307 Bacteria 11011
66 Ga0157375_10000048 3300013308 Bacteria 140600
67 Ga0157380_10001349 3300014326 Bacteria 15978
68 Ga0157379_10002446 3300014968 Bacteria 15551
69 Ga0157379_10037787 3300014968 Bacteria 4306
70 Ga0183365_10003 3300015684 Bacteria 414944
71 Ga0163161_10001028 3300017792 Bacteria 21281
72 Ga0209026_1001205 3300025250 Bacteria 11975
73 Ga0209050_1000324 3300025298 Bacteria 95696
74 Ga0207696_1000181 3300025711 Bacteria 98281
75 Ga0207680_10000011 3300025903 Bacteria 391225
76 Ga0207647_10003534 3300025904 Bacteria 11723
77 Ga0207695_10001219 3300025913 Bacteria 44087
78 Ga0207695_10024443 3300025913 Bacteria 6799
79 Ga0207695_10032745 3300025913 Bacteria 5683
80 Ga0207695_10046772 3300025913 Bacteria 4584
81 Ga0207671_10011321 3300025914 Bacteria 7269
82 Ga0207657_10021953 3300025919 Bacteria 5993
83 Ga0207681_10000068 3300025923 Bacteria 97190
84 Ga0207681_10000088 3300025923 Bacteria 80059
85 Ga0207694_10007315 3300025924 Bacteria 8378
86 Ga0207694_10017960 3300025924 Bacteria 5346
87 Ga0207644_10023909 3300025931 Bacteria 4190
88 Ga0207670_10004164 3300025936 Bacteria 7756
89 Ga0207711_10001449 3300025941 Bacteria 22173
90 Ga0207711_10032650 3300025941 Bacteria 4401
91 Ga0207661_10055528 3300025944 Bacteria 3177
92 Ga0207667_10015554 3300025949 Bacteria 8636
93 Ga0207667_10046746 3300025949 Bacteria 4584
94 Ga0207712_10000013 3300025961 Bacteria 391208
95 Ga0207668_10010016 3300025972 Bacteria 5705
96 Ga0207640_10012228 3300025981 Bacteria 4885
97 Ga0207658_10003802 3300025986 Bacteria 10631
98 Ga0207703_10006577 3300026035 Bacteria 9274
99 Ga0207639_10000017 3300026041 Bacteria 256177
100 Ga0207639_10000366 3300026041 Bacteria 31310
101 Ga0207639_10017040 3300026041 Bacteria 5148
102 Ga0207678_10003586 3300026067 Bacteria 13959
103 Ga0207702_10005022 3300026078 Bacteria 11624
104 Ga0207641_10000112 3300026088 Bacteria 120365
105 Ga0207676_10000644 3300026095 Bacteria 27992
106 Ga0207676_10005800 3300026095 Bacteria 8729
107 Ga0207674_10005599 3300026116 Bacteria 14892
108 Ga0207674_10012711 3300026116 Bacteria 9408
109 Ga0207675_100001658 3300026118 Bacteria 22274
110 Ga0268266_10000025 3300028379 Bacteria 477143
111 Ga0268266_10004857 3300028379 Bacteria 12751
112 Ga0268266_10011835 3300028379 Bacteria 7560
113 Ga0268265_10000096 3300028380 Bacteria 111507
114 Ga0268264_10000037 3300028381 Bacteria 391116
115 Ga0265337_1000188 3300028556 Bacteria 32521
116 Ga0265337_1005536 3300028556 Bacteria 5008
117 Ga0265319_1000822 3300028563 Bacteria 19798
118 Ga0265319_1002127 3300028563 Bacteria 11091
119 Ga0265318_10003483 3300028577 Bacteria 7893
120 Ga0265323_10010505 3300028653 Bacteria 3751
121 Ga0265336_10000240 3300028666 Bacteria 39084
122 Ga0307515_10035034 3300028794 Bacteria 8184
123 Ga0265338_10001431 3300028800 Bacteria 38817
124 Ga0265338_10001459 3300028800 Bacteria 38318
125 Ga0265338_10003502 3300028800 Bacteria 22031
126 Ga0265338_10024207 3300028800 Bacteria 6211
127 Ga0265320_10000059 3300031240 Bacteria 102018
128 Ga0265320_10000295 3300031240 Bacteria 40537
129 Ga0265320_10000624 3300031240 Bacteria 27104
130 Ga0265320_10000660 3300031240 Bacteria 26365
131 Ga0265320_10001184 3300031240 Bacteria 19203
132 Ga0265320_10001315 3300031240 Bacteria 18174
133 Ga0265320_10007552 3300031240 Bacteria 6739
134 Ga0265329_10001839 3300031242 Bacteria 10067
135 Ga0265331_10002773 3300031250 Bacteria 11634
136 Ga0265327_10002787 3300031251 Bacteria 17658
137 Ga0265327_10003125 3300031251 Bacteria 16270
138 Ga0265316_10006360 3300031344 Bacteria 11296
139 Ga0265313_10001971 3300031595 Bacteria 18556
140 Ga0265314_10000186 3300031711 Bacteria 92221
141 Ga0307510_10027792 3300033180 Bacteria 6471
142 Ga0373930_0000609 3300034816 Bacteria 4957
143 Ga0373928_0000069 3300035084 Bacteria 17972
144 Ga0373929_0002337 3300035085 Bacteria 3485
145 Ga0373944_0000122 3300035089 Bacteria 14607
146 Ga0373949_0000865 3300035090 Bacteria 9557
147 Ga0373932_0000001 3300035112 Bacteria 1459067
148 Ga0373943_0013207 3300035170 Bacteria 3727
149 Ga0373962_0000033 3300035242 Bacteria 33867
150 Ga0316574_0006014 3300035398 Bacteria 6521
151 Ga0316574_0021842 3300035398 Bacteria 3804
152 Ga0373931_0000002 3300035691 Bacteria 599830
153 Ga0373935_0015746 3300035692 Bacteria 4574
154 Ga0373927_0006301 3300035695 Bacteria 8091
155 Ga0373927_0010437 3300035695 Bacteria 6191
156 Ga0373927_0014977 3300035695 Bacteria 5130
157 Ga0373937_0002072 3300036401 Bacteria 16775
158 Ga0373925_0000121 3300037068 Bacteria 84624
159 Ga0373925_0001231 3300037068 Bacteria 22626
160 Ga0395905_0000091 3300037471 Bacteria 151747
161 Ga0451577_0012193 3300042876 Bacteria 8082
162 Ga0466966_0001223 3300044684 Bacteria 16480
163 Ga0453684_0000238 3300044712 Bacteria 236003
164 Ga0466971_0003224 3300044719 Bacteria 6961
165 Ga0466970_0009769 3300044765 Bacteria 4857
166 Ga0451576_0003871 3300045051 Bacteria 20074
167 Ga0451576_0013553 3300045051 Bacteria 9118
168 Ga0495592_0000103 3300046454 Bacteria 75494
169 Ga0495638_0000079 3300046460 Bacteria 157488
170 Ga0495662_0004150 3300046476 Bacteria 7302
171 Ga0495583_0000030 3300046506 Bacteria 254970
172 Ga0495583_0000234 3300046506 Bacteria 92118
173 Ga0495628_0000560 3300046516 Bacteria 34267
174 Ga0495630_0000077 3300046517 Bacteria 76692
175 Ga0495630_0001725 3300046517 Bacteria 15254
176 Ga0495630_0002846 3300046517 Bacteria 12005
177 Ga0495648_0002545 3300046524 Bacteria 16711
178 Ga0495666_0014870 3300046526 Bacteria 3873
179 Ga0495640_0028533 3300046533 Bacteria 4017
180 Ga0495586_0000044 3300046535 Bacteria 74379
181 Ga0495586_0003390 3300046535 Bacteria 8543
182 Ga0495586_0004638 3300046535 Bacteria 7346
183 Ga0495634_0015188 3300046642 Bacteria 5536
184 Ga0495611_0001489 3300046648 Bacteria 11639
185 Ga0495661_0005193 3300046665 Bacteria 9279
186 Ga0495647_0000495 3300046681 Bacteria 11438
187 Ga0495658_0003129 3300046683 Bacteria 8259
188 Ga0495658_0014314 3300046683 Bacteria 4051
189 Ga0495613_0001138 3300046689 Bacteria 20240
190 Ga0495613_0007444 3300046689 Bacteria 8159
191 Ga0495624_0013786 3300046690 Bacteria 5505
192 Ga0495649_0000701 3300046694 Bacteria 27333
193 Ga0495672_0000735 3300047320 Bacteria 36006
194 Ga0495676_0025739 3300047321 Bacteria 5075
195 Ga0495686_0000505 3300047472 Bacteria 56729
196 Ga0495686_0000844 3300047472 Bacteria 39354
197 Ga0495686_0003193 3300047472 Bacteria 14439
198 Ga0496100_0001038 3300048903 Bacteria 13417
199 Ga0496101_0002127 3300048904 Bacteria 12075
200 Ga0496102_0000122 3300048905 Bacteria 111166
201 Ga0496103_0000056 3300048906 Bacteria 143579
202 Ga0496103_0003244 3300048906 Bacteria 9976
203 Ga0496104_0000480 3300048907 Bacteria 34405
204 Ga0496105_0000057 3300048908 Bacteria 88084
205 Ga0496106_0002493 3300048909 Bacteria 13699
206 Ga0496107_0000086 3300048910 Bacteria 44285
207 Ga0496112_0016423 3300048915 Bacteria 6934
208 Ga0496113_0000036 3300048916 Bacteria 56761
209 Ga0496115_0001044 3300048918 Bacteria 20108
210 Ga0496115_0036193 3300048918 Bacteria 3907
211 Ga0496116_0024759 3300048919 Bacteria 4429
212 Ga0496117_0000473 3300048920 Bacteria 66756
213 Ga0496117_0014743 3300048920 Bacteria 6710
214 Ga0496119_0000079 3300048922 Bacteria 140247
215 Ga0496120_0000506 3300048923 Bacteria 60652
216 Ga0496121_0001387 3300048924 Bacteria 41011
217 Ga0496122_0001515 3300048925 Bacteria 37040
218 Ga0496123_0000627 3300048926 Bacteria 59185
219 Ga0496124_0009796 3300048927 Bacteria 9803
220 Ga0496125_0001706 3300048928 Bacteria 30600
221 Ga0496126_0000103 3300048929 Bacteria 201037
222 Ga0501034_0002737 3300049571 Bacteria 20747
223 Ga0501035_0011253 3300049822 Bacteria 8289
224 Ga0501044_0020427 3300049823 Bacteria 7072
225 nmdc:mga06z11_1394_c1 3300050494 Bacteria 8966
226 Ga0500643_003405 3300053087 Bacteria 7675
227 Ga0500651_0013240 3300053093 Bacteria 5019
228 Ga0500555_000429 3300053103 Bacteria 17436
229 Ga0500572_000253 3300053111 Bacteria 19177
230 Ga0500595_008068 3300053119 Bacteria 4321
231 Ga0500608_000102 3300053122 Bacteria 34987
232 Ga0500608_004573 3300053122 Bacteria 5381
233 Ga0500618_000053 3300053125 Bacteria 101079
234 Ga0500618_000136 3300053125 Bacteria 61719
235 Ga0500618_002181 3300053125 Bacteria 7680
236 Ga0500655_000013 3300053133 Bacteria 50102
237 Ga0500559_0000018 3300053136 Bacteria 140924
238 Ga0500564_000086 3300053138 Bacteria 24009
239 Ga0500564_002803 3300053138 Bacteria 6564
240 Ga0500590_007422 3300053148 Bacteria 5412
241 Ga0500616_0000016 3300053153 Bacteria 627087
242 Ga0500622_0009728 3300053156 Bacteria 5311
243 Ga0500624_000181 3300053157 Bacteria 24974
244 Ga0500636_0003079 3300053177 Bacteria 9348
245 Ga0500567_001310 3300053723 Bacteria 9925
246 Ga0500570_000084 3300053724 Bacteria 25886
247 Ga0500625_000022 3300053729 Bacteria 78028
248 Ga0500645_001314 3300053730 Bacteria 12892

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048919 Ga0496116_0024759 Ga0496116_0024759_1689_4379 879
2 3300035170 Ga0373943_0013207 Ga0373943_0013207_881_3715 901
3 3300035398 Ga0316574_0006014 Ga0316574_0006014_1571_4663 909
4 3300053138 Ga0500564_002803 Ga0500564_002803_3286_6357 932
5 3300053723 Ga0500567_001310 Ga0500567_001310_1674_4745 932
6 3300053729 Ga0500625_000022 Ga0500625_000022_22475_25546 932
7 3300053122 Ga0500608_004573 Ga0500608_004573_1586_4657 934
8 3300005289 Ga0065704_10000332 Ga0065704_100003322 946
9 3300005353 Ga0070669_100000050 Ga0070669_10000005075 946
10 3300005355 Ga0070671_100000804 Ga0070671_1000008049 946
11 3300005367 Ga0070667_100000864 Ga0070667_10000086420 946
12 3300005548 Ga0070665_100002632 Ga0070665_10000263211 946
13 3300013306 Ga0163162_10025255 Ga0163162_100252552 946
14 3300025923 Ga0207681_10000068 Ga0207681_1000006818 946
15 3300025972 Ga0207668_10010016 Ga0207668_100100161 946
16 3300028379 Ga0268266_10011835 Ga0268266_100118354 946
17 3300048903 Ga0496100_0001038 Ga0496100_0001038_1410_4499 946
18 3300048904 Ga0496101_0002127 Ga0496101_0002127_8205_11294 946
19 3300048905 Ga0496102_0000122 Ga0496102_0000122_16953_20042 946
20 3300048906 Ga0496103_0000056 Ga0496103_0000056_49370_52459 946
21 3300048907 Ga0496104_0000480 Ga0496104_0000480_31232_34321 946
22 3300048908 Ga0496105_0000057 Ga0496105_0000057_31055_34144 946
23 3300048915 Ga0496112_0016423 Ga0496112_0016423_2189_5278 946
24 3300048916 Ga0496113_0000036 Ga0496113_0000036_52741_55830 946
25 3300048920 Ga0496117_0000473 Ga0496117_0000473_55886_58975 946
26 3300048922 Ga0496119_0000079 Ga0496119_0000079_81289_84378 946
27 3300048923 Ga0496120_0000506 Ga0496120_0000506_29641_32730 946
28 3300048925 Ga0496122_0001515 Ga0496122_0001515_2726_5815 946
29 3300048926 Ga0496123_0000627 Ga0496123_0000627_2156_5245 946
30 3300048927 Ga0496124_0009796 Ga0496124_0009796_2139_5228 946
31 3300048928 Ga0496125_0001706 Ga0496125_0001706_24256_27345 946
32 3300048929 Ga0496126_0000103 Ga0496126_0000103_55871_58960 946
33 3300003323 rootH1_10074774 rootH1_1007477412 950
34 3300053153 Ga0500616_0000016 Ga0500616_0000016_544887_548033 957
35 3300005295 Ga0065707_10084271 Ga0065707_100842715 963
36 3300014968 Ga0157379_10002446 Ga0157379_1000244614 963
37 3300005563 Ga0068855_100011920 Ga0068855_1000119209 965
38 3300046454 Ga0495592_0000103 Ga0495592_0000103_12399_15527 967
39 3300046476 Ga0495662_0004150 Ga0495662_0004150_976_4104 967
40 3300046516 Ga0495628_0000560 Ga0495628_0000560_12400_15528 967
41 3300046517 Ga0495630_0002846 Ga0495630_0002846_2242_5370 967
42 3300046526 Ga0495666_0014870 Ga0495666_0014870_631_3759 967
43 3300046535 Ga0495586_0003390 Ga0495586_0003390_3721_6849 967
44 3300046690 Ga0495624_0013786 Ga0495624_0013786_1610_4738 967
45 3300003320 rootH2_10038923 rootH2_100389235 969
46 3300009093 Ga0105240_10033582 Ga0105240_100335822 970
47 3300009177 Ga0105248_10029720 Ga0105248_100297202 970
48 3300025913 Ga0207695_10001219 Ga0207695_1000121922 971
49 3300009092 Ga0105250_10000005 Ga0105250_10000005234 972
50 3300025711 Ga0207696_1000181 Ga0207696_100018163 972
51 3300042876 Ga0451577_0012193 Ga0451577_0012193_94_3273 973
52 3300033180 Ga0307510_10027792 Ga0307510_100277923 976
53 3300005329 Ga0070683_100001543 Ga0070683_1000015437 977
54 3300025944 Ga0207661_10055528 Ga0207661_100555282 977
55 3300053156 Ga0500622_0009728 Ga0500622_0009728_2076_5183 977
56 3300034816 Ga0373930_0000609 Ga0373930_0000609_989_4102 980
57 3300035084 Ga0373928_0000069 Ga0373928_0000069_8323_11436 980
58 3300035085 Ga0373929_0002337 Ga0373929_0002337_358_3471 980
59 3300035089 Ga0373944_0000122 Ga0373944_0000122_11456_14569 980
60 3300035090 Ga0373949_0000865 Ga0373949_0000865_6268_9381 980
61 3300035112 Ga0373932_0000001 Ga0373932_0000001_1348824_1351937 980
62 3300035242 Ga0373962_0000033 Ga0373962_0000033_18938_22051 980
63 3300035691 Ga0373931_0000002 Ga0373931_0000002_143461_146574 980
64 3300035695 Ga0373927_0010437 Ga0373927_0010437_1343_4456 980
65 3300037068 Ga0373925_0000121 Ga0373925_0000121_77222_80335 980
66 3300046506 Ga0495583_0000234 Ga0495583_0000234_73351_76455 980
67 3300053119 Ga0500595_008068 Ga0500595_008068_1131_4223 980
68 3300026041 Ga0207639_10017040 Ga0207639_100170403 981
69 3300047320 Ga0495672_0000735 Ga0495672_0000735_18389_21499 981
70 3300035695 Ga0373927_0006301 Ga0373927_0006301_4825_8025 983
71 3300053093 Ga0500651_0013240 Ga0500651_0013240_953_4030 983
72 3300053133 Ga0500655_000013 Ga0500655_000013_925_4002 983
73 3300053148 Ga0500590_007422 Ga0500590_007422_1218_4295 983
74 3300053724 Ga0500570_000084 Ga0500570_000084_21794_24871 983
75 3300053730 Ga0500645_001314 Ga0500645_001314_3684_6770 983
76 3300005937 Ga0081455_10000997 Ga0081455_100009974 984
77 3300031251 Ga0265327_10002787 Ga0265327_100027875 984
78 3300005329 Ga0070683_100015123 Ga0070683_1000151233 985
79 3300005530 Ga0070679_100025580 Ga0070679_1000255803 985
80 3300031242 Ga0265329_10001839 Ga0265329_100018392 986
81 3300031711 Ga0265314_10000186 Ga0265314_1000018662 986
82 3300046694 Ga0495649_0000701 Ga0495649_0000701_15336_18461 987
83 3300005339 Ga0070660_100014888 Ga0070660_1000148884 988
84 3300005548 Ga0070665_100000290 Ga0070665_10000029028 988
85 3300025919 Ga0207657_10021953 Ga0207657_100219532 988
86 3300035398 Ga0316574_0021842 Ga0316574_0021842_25_3120 988
87 3300045051 Ga0451576_0003871 Ga0451576_0003871_1650_4775 988
88 3300048918 Ga0496115_0001044 Ga0496115_0001044_11966_15043 988
89 3300005436 Ga0070713_100027337 Ga0070713_1000273373 989
90 3300025250 Ga0209026_1001205 Ga0209026_10012052 989
91 3300028800 Ga0265338_10001459 Ga0265338_100014592 989
92 3300006880 Ga0075429_100047840 Ga0075429_1000478402 990
93 3300009551 Ga0105238_10044588 Ga0105238_100445882 990
94 3300028653 Ga0265323_10010505 Ga0265323_100105052 990
95 3300046460 Ga0495638_0000079 Ga0495638_0000079_141706_144801 992
96 3300005618 Ga0068864_100018376 Ga0068864_1000183762 993
97 3300013306 Ga0163162_10035729 Ga0163162_100357293 993
98 3300025914 Ga0207671_10011321 Ga0207671_100113214 993
99 3300026095 Ga0207676_10005800 Ga0207676_100058004 993
100 3300046524 Ga0495648_0002545 Ga0495648_0002545_3480_6560 993
101 3300053138 Ga0500564_000086 Ga0500564_000086_3836_6916 993
102 3300031240 Ga0265320_10000295 Ga0265320_1000029530 994
103 3300031250 Ga0265331_10002773 Ga0265331_100027733 994
104 3300031595 Ga0265313_10001971 Ga0265313_1000197114 994
105 3300047472 Ga0495686_0003193 Ga0495686_0003193_2504_5602 994
106 3300025298 Ga0209050_1000324 Ga0209050_100032444 995
107 3300053125 Ga0500618_002181 Ga0500618_002181_3800_6877 995
108 3300035695 Ga0373927_0014977 Ga0373927_0014977_1283_4402 996
109 3300046648 Ga0495611_0001489 Ga0495611_0001489_7595_10675 996
110 3300005548 Ga0070665_100003090 Ga0070665_10000309016 998
111 3300028379 Ga0268266_10004857 Ga0268266_1000485710 998
112 3300046506 Ga0495583_0000030 Ga0495583_0000030_104100_107285 999
113 3300046665 Ga0495661_0005193 Ga0495661_0005193_2995_6180 999
114 3300053103 Ga0500555_000429 Ga0500555_000429_11136_14321 999
115 3300028556 Ga0265337_1000188 Ga0265337_10001889 1000
116 3300028666 Ga0265336_10000240 Ga0265336_1000024014 1000
117 3300028800 Ga0265338_10001431 Ga0265338_1000143113 1000
118 3300053111 Ga0500572_000253 Ga0500572_000253_13371_16460 1000
119 3300028556 Ga0265337_1005536 Ga0265337_10055363 1001
120 3300031240 Ga0265320_10000059 Ga0265320_1000005918 1001
121 3300031240 Ga0265320_10001315 Ga0265320_1000131510 1001
122 3300049823 Ga0501044_0020427 Ga0501044_0020427_187_3270 1001
123 3300005549 Ga0070704_100008707 Ga0070704_1000087072 1002
124 3300046683 Ga0495658_0003129 Ga0495658_0003129_2172_5291 1003
125 3300048909 Ga0496106_0002493 Ga0496106_0002493_8105_11191 1003
126 3300048910 Ga0496107_0000086 Ga0496107_0000086_19621_22707 1003
127 3300048918 Ga0496115_0036193 Ga0496115_0036193_546_3641 1003
128 3300048924 Ga0496121_0001387 Ga0496121_0001387_12648_15734 1003
129 3300053125 Ga0500618_000053 Ga0500618_000053_80201_83287 1003
130 3300005719 Ga0068861_100000534 Ga0068861_10000053413 1004
131 3300026118 Ga0207675_100001658 Ga0207675_10000165813 1004
132 3300005617 Ga0068859_100013097 Ga0068859_1000130973 1005
133 3300006931 Ga0097620_100013097 Ga0097620_1000130973 1005
134 3300009177 Ga0105248_10002135 Ga0105248_1000213522 1005
135 3300025941 Ga0207711_10001449 Ga0207711_100014493 1005
136 3300053136 Ga0500559_0000018 Ga0500559_0000018_61170_64271 1005
137 3300005544 Ga0070686_100012070 Ga0070686_1000120702 1006
138 3300031240 Ga0265320_10007552 Ga0265320_100075523 1007
139 3300028563 Ga0265319_1000822 Ga0265319_100082212 1008
140 3300031240 Ga0265320_10000624 Ga0265320_100006246 1008
141 3300005458 Ga0070681_10010861 Ga0070681_100108614 1009
142 3300009551 Ga0105238_10020178 Ga0105238_100201782 1009
143 3300013308 Ga0157375_10000048 Ga0157375_1000004868 1009
144 3300028577 Ga0265318_10003483 Ga0265318_100034831 1009
145 3300047472 Ga0495686_0000844 Ga0495686_0000844_36173_39319 1009
146 3300037471 Ga0395905_0000091 Ga0395905_0000091_63735_66830 1011
147 3300005577 Ga0068857_100001201 Ga0068857_10000120114 1012
148 3300026116 Ga0207674_10012711 Ga0207674_100127114 1012
149 3300028794 Ga0307515_10035034 Ga0307515_100350343 1013
150 3300035692 Ga0373935_0015746 Ga0373935_0015746_298_3492 1013
151 3300036401 Ga0373937_0002072 Ga0373937_0002072_939_4067 1013
152 3300037068 Ga0373925_0001231 Ga0373925_0001231_1699_4893 1013
153 3300046517 Ga0495630_0001725 Ga0495630_0001725_4507_7701 1013
154 3300003323 rootH1_10084515 rootH1_100845157 1014
155 3300005340 Ga0070689_100010909 Ga0070689_1000109093 1014
156 3300005539 Ga0068853_100000012 Ga0068853_100000012181 1014
157 3300009093 Ga0105240_10002417 Ga0105240_1000241714 1014
158 3300009551 Ga0105238_10004426 Ga0105238_100044267 1014
159 3300025913 Ga0207695_10024443 Ga0207695_100244434 1014
160 3300025924 Ga0207694_10007315 Ga0207694_100073158 1014
161 3300025936 Ga0207670_10004164 Ga0207670_100041643 1014
162 3300025949 Ga0207667_10015554 Ga0207667_100155545 1014
163 3300026041 Ga0207639_10000017 Ga0207639_10000017207 1014
164 3300028800 Ga0265338_10003502 Ga0265338_100035028 1014
165 3300028800 Ga0265338_10024207 Ga0265338_100242072 1014
166 3300031240 Ga0265320_10001184 Ga0265320_1000118410 1014
167 3300031344 Ga0265316_10006360 Ga0265316_100063606 1014
168 3300044712 Ga0453684_0000238 Ga0453684_0000238_69849_72968 1014
169 3300046517 Ga0495630_0000077 Ga0495630_0000077_36574_39738 1014
170 3300046533 Ga0495640_0028533 Ga0495640_0028533_580_3744 1014
171 3300046535 Ga0495586_0000044 Ga0495586_0000044_34214_37378 1014
172 3300046642 Ga0495634_0015188 Ga0495634_0015188_434_3598 1014
173 iso_pu_bacteria 2582581279 2585149252 1014
174 iso_pu_bacteria 2643221552 2643781024 1014
175 3300005518 Ga0070699_100007662 Ga0070699_1000076626 1015
176 3300005614 Ga0068856_100022799 Ga0068856_1000227992 1015
177 3300025913 Ga0207695_10046772 Ga0207695_100467723 1015
178 3300025949 Ga0207667_10046746 Ga0207667_100467463 1015
179 3300025981 Ga0207640_10012228 Ga0207640_100122283 1015
180 3300028563 Ga0265319_1002127 Ga0265319_10021276 1015
181 3300031240 Ga0265320_10000660 Ga0265320_1000066022 1015
182 3300045051 Ga0451576_0013553 Ga0451576_0013553_5263_8361 1015
183 iso_pu_bacteria 2582581305 2585262832 1015
184 3300002074 JGI24748J21848_1000052 JGI24748J21848_100005262 1016
185 3300002239 JGI24034J26672_10000031 JGI24034J26672_1000003138 1016
186 3300005330 Ga0070690_100000010 Ga0070690_10000001067 1016
187 3300005335 Ga0070666_10000006 Ga0070666_10000006270 1016
188 3300005353 Ga0070669_100000076 Ga0070669_10000007615 1016
189 3300005367 Ga0070667_100015346 Ga0070667_1000153462 1016
190 3300005544 Ga0070686_100000042 Ga0070686_10000004267 1016
191 3300005548 Ga0070665_100000019 Ga0070665_10000001968 1016
192 3300005841 Ga0068863_100000069 Ga0068863_100000069111 1016
193 3300005843 Ga0068860_100000014 Ga0068860_100000014270 1016
194 3300005844 Ga0068862_100002295 Ga0068862_1000022957 1016
195 3300009553 Ga0105249_10000035 Ga0105249_1000003562 1016
196 3300014326 Ga0157380_10001349 Ga0157380_100013492 1016
197 3300014968 Ga0157379_10037787 Ga0157379_100377872 1016
198 3300017792 Ga0163161_10001028 Ga0163161_1000102815 1016
199 3300025903 Ga0207680_10000011 Ga0207680_10000011267 1016
200 3300025923 Ga0207681_10000088 Ga0207681_1000008813 1016
201 3300025924 Ga0207694_10017960 Ga0207694_100179602 1016
202 3300025931 Ga0207644_10023909 Ga0207644_100239092 1016
203 3300025941 Ga0207711_10032650 Ga0207711_100326502 1016
204 3300025961 Ga0207712_10000013 Ga0207712_10000013267 1016
205 3300025986 Ga0207658_10003802 Ga0207658_100038029 1016
206 3300026035 Ga0207703_10006577 Ga0207703_100065774 1016
207 3300026088 Ga0207641_10000112 Ga0207641_1000011228 1016
208 3300026095 Ga0207676_10000644 Ga0207676_1000064419 1016
209 3300028379 Ga0268266_10000025 Ga0268266_10000025421 1016
210 3300028380 Ga0268265_10000096 Ga0268265_1000009657 1016
211 3300028381 Ga0268264_10000037 Ga0268264_10000037267 1016
212 3300048906 Ga0496103_0003244 Ga0496103_0003244_1564_4665 1016
213 3300048920 Ga0496117_0014743 Ga0496117_0014743_1452_4553 1016
214 3300015684 Ga0183365_10003 Ga0183365_1000312 1017
215 3300046535 Ga0495586_0004638 Ga0495586_0004638_1118_4264 1017
216 3300046681 Ga0495647_0000495 Ga0495647_0000495_6594_9740 1017
217 3300046683 Ga0495658_0014314 Ga0495658_0014314_434_3580 1017
218 3300046689 Ga0495613_0007444 Ga0495613_0007444_4431_7577 1017
219 3300047321 Ga0495676_0025739 Ga0495676_0025739_1698_4844 1017
220 iso_pu_bacteria 2919138771 2919142618 1017
221 3300006178 Ga0075367_10000555 Ga0075367_100005556 1018
222 3300049822 Ga0501035_0011253 Ga0501035_0011253_4086_7169 1018
223 3300050494 nmdc:mga06z11_1394_c1 nmdc:mga06z11_1394_c1_43_3153 1018
224 3300053125 Ga0500618_000136 Ga0500618_000136_44190_47285 1018
225 3300031251 Ga0265327_10003125 Ga0265327_100031253 1019
226 3300044684 Ga0466966_0001223 Ga0466966_0001223_3637_6762 1019
227 3300044719 Ga0466971_0003224 Ga0466971_0003224_598_3723 1019
228 3300044765 Ga0466970_0009769 Ga0466970_0009769_1008_4133 1019
229 3300046689 Ga0495613_0001138 Ga0495613_0001138_2451_5528 1019
230 3300053122 Ga0500608_000102 Ga0500608_000102_6006_9122 1019
231 iso_pu_bacteria 2739367664 2739650444 1019
232 iso_pu_bacteria 2739367865 2740028917 1019
233 3300049571 Ga0501034_0002737 Ga0501034_0002737_11631_14726 1022
234 iso_pu_bacteria 2738541275 2738709103 1022
235 iso_pu_bacteria 2738541301 2738847528 1022
236 iso_pu_bacteria 2738541304 2738863257 1022
237 iso_pu_bacteria 2738543022 2739295775 1022
238 iso_pu_bacteria 2738543033 2739357453 1022
239 iso_pu_bacteria 2928100450 2928102127 1022
240 iso_pu_bacteria 2928959182 2928962431 1022
241 3300047472 Ga0495686_0000505 Ga0495686_0000505_20205_23318 1023
242 3300053087 Ga0500643_003405 Ga0500643_003405_584_3685 1026
243 3300053157 Ga0500624_000181 Ga0500624_000181_8777_11878 1026
244 3300053177 Ga0500636_0003079 Ga0500636_0003079_2329_5430 1026
245 3300001915 JGI24741J21665_1000102 JGI24741J21665_100010214 1029
246 3300001989 JGI24739J22299_10000648 JGI24739J22299_100006487 1029
247 3300002067 JGI24735J21928_10001224 JGI24735J21928_100012243 1029
248 3300005539 Ga0068853_100038676 Ga0068853_1000386762 1029
249 3300005563 Ga0068855_100025330 Ga0068855_1000253301 1029
250 3300005614 Ga0068856_100006112 Ga0068856_1000061129 1029
251 3300009174 Ga0105241_10004854 Ga0105241_100048545 1029
252 3300010375 Ga0105239_10007806 Ga0105239_100078068 1029
253 3300013100 Ga0157373_10003461 Ga0157373_100034612 1029
254 3300013105 Ga0157369_10008715 Ga0157369_100087152 1029
255 3300013307 Ga0157372_10008351 Ga0157372_100083515 1029
256 3300025904 Ga0207647_10003534 Ga0207647_100035342 1029
257 3300025913 Ga0207695_10032745 Ga0207695_100327453 1029
258 3300026041 Ga0207639_10000366 Ga0207639_1000036622 1029
259 3300026067 Ga0207678_10003586 Ga0207678_100035867 1029
260 3300026078 Ga0207702_10005022 Ga0207702_100050227 1029
261 3300026116 Ga0207674_10005599 Ga0207674_100055995 1029

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00873

ACR_tran

AcrB/AcrD/AcrF family

5

892

0.96

PF00873

ACR_tran

AcrB/AcrD/AcrF family

911

1054

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
4k0j-assembly2.cif.gz_D x-ray crystal structure of a heavy metal efflux pump, crystal form i 0.9489 5 1015
4k0j-assembly2.cif.gz_D x-ray crystal structure of a heavy metal efflux pump, crystal form i 0.9422 5 1015
4k0e-assembly1.cif.gz_B x-ray crystal structure of a heavy metal efflux pump, crystal form ii 0.9404 5 1013
4k0j-assembly2.cif.gz_F x-ray crystal structure of a heavy metal efflux pump, crystal form i 0.939 6 1019
4k0j-assembly2.cif.gz_E x-ray crystal structure of a heavy metal efflux pump, crystal form i 0.9388 5 1018
ID Description Score Start End Superfamily
af_Q2FVZ5_39_104_3.30.70.1430 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Multidrug efflux transporter AcrB pore domain 0.955 46 103 3.30.70.1430
af_P38054_46_113_3.30.70.1430 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Multidrug efflux transporter AcrB pore domain 0.9505 48 112 3.30.70.1430
af_P37637_331_506_1.20.1640.10 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.938 331 495 1.20.1640.10
4zjlE01 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.9312 328 496 1.20.1640.10
1oyeA01 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.9259 328 496 1.20.1640.10
ID Description Score Start End GO Terms
AF-A0A5J4R062-F1-model_v4 Cobalt-zinc-cadmium resistance protein CzcA 0.9564 362 975 GO:0005886
GO:0042910
AF-A0A3D2H6K4-F1-model_v4 CusA/CzcA family heavy metal efflux RND transporter 0.9502 1 1015 GO:0005886
GO:0008324
GO:0042910
AF-A0A3D1F444-F1-model_v4 CusA/CzcA family heavy metal efflux RND transporter 0.9491 135 1019 GO:0005886
GO:0008324
GO:0042910
AF-A0A1J5PXB3-F1-model_v4 Cobalt-zinc-cadmium resistance protein CzcA 0.9491 552 1020 GO:0005886
GO:0042910
AF-A0A356VI36-F1-model_v4 deleted 0.9486 49 132

Feature Viewer

pLDDT pTM Quality
87.88 0.83 High
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Predicted Structure (AlphaFold2)

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