F369756

General Info

Members Datasets Scaffolds Average Seq Length
260 175 241 298

Family's Representative Sequence

Representative Sequence 3300044656|Ga0466969_0044558|Ga0466969_0044558_767_1741
Length 324
Sequence MPTKEMDNAKRRTIRRALITGVRGFTGEYVRDELLQAGYEVHGTLSRTDVNGNPPFKYEHVLDITSVHECRRVIGMVQPTHIVHLAAISYIAHDVALDMYHVNVLGALNILQACVDVGCHPEKVLTASSANVYGNATGVIDESEPPAPVNHYAASKLAMEHLARTWSDRLPIIITRPFNYTGRGQSTRFLVPKIVSHFAQRRPFVELGNLDVARDFSDVRMVAKAYRALLESSAAGETVNVCSERPRTLHEVIDMVRKATGHDPEIRVNRAFVRENEVKVLVGSAAKLRRLAPAVRPIDFSETIRWMCGAGIAVDSPLTLEPSP

Samples

Sample ID Description Type Environment
1 2510065053 Pseudomonas sp. MOIL14HWK12:I1 Isolate Rhizosphere
2 2510065055 Pseudomonas sp. MOIL14HWK12:I2 Isolate Rhizosphere
3 2510065058 Pseudomonas oleovorans MOIL14HWK12 Isolate Rhizosphere
4 2515154123 Trinickia symbiotica JPY347 Isolate Nodule
5 2600255067 Paraburkholderia kururiensis thiooxydans NBRC 107107 Isolate Unclassified
6 2608642108 Pantoea agglomerans NFPP29 Isolate Rhizoplane
7 2713897148 Pseudomonas fluorescens SF39a Isolate Rhizosphere
8 2738541271 Pseudomonas sp. GV021 Isolate Unclassified
9 2738543016 Pseudomonas sp. GV012 Isolate Unclassified
10 2773857672 Pseudomonas sp. 1766 Isolate Unclassified
11 2791355137 Paraburkholderia piptadeniae STM7183 Isolate Unclassified
12 2842832357 Pseudomonas sp. R-72164 Isolate Unclassified
13 2842843487 Pseudomonas sp. R-72074 Isolate Unclassified
14 2857576091 Pigmentiphaga sp. R-72090 Isolate Unclassified
15 2902682994 Paraburkholderia atlantica CNPSo 3155 Isolate Unclassified
16 2919487758 Pseudomonas koreensis 3441 Isolate Unclassified
17 2974289157 Pseudomonas fluorescens SORGH_AS 191 Isolate Unclassified
18 2981990288 Burkholderia sp. PvR073 Isolate Rhizosphere
19 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
20 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
21 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
22 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
23 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
24 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
25 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
26 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
27 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
28 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
29 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
30 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
31 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
32 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
33 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
34 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
35 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
36 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
37 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
38 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
39 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
40 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
41 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
42 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
43 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
44 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
45 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
46 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
47 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
48 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
49 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
50 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
51 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
52 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
53 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
54 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
55 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
56 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
57 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
58 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
59 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
60 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
61 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
62 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
63 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
64 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
65 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
66 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
67 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
68 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
69 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
70 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
71 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
72 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
73 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
74 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
75 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
76 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
77 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
78 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
79 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
80 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
81 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
82 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
83 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
85 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
87 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
109 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
110 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
111 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
115 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
116 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
117 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
118 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
119 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
120 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
121 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
122 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
123 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
124 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
125 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
126 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
127 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
128 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
129 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
130 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
131 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
132 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
133 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
134 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
135 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
136 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
137 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
138 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
139 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
140 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
141 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
142 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
143 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
144 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
145 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
146 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
147 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
148 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
149 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
150 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
151 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
152 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
153 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
154 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
155 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
156 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
157 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
158 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
159 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
160 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
161 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
162 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
163 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
164 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
165 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
166 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
167 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
168 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
169 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
170 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
171 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
172 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
173 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
174 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
175 8056172158 Pseudomonas ekonensis COR58 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.69
Metatranscriptomes 0
Isolates 7.31

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.38
Nodule 1.15
Rhizoplane 1.15
Rhizosphere 75.38
Stem 0
Stem Tuber 0
Unclassified 16.92

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24741J21665_1002894 3300001915 Bacteria 4306
2 rootH2_10018794 3300003320 Bacteria 7223
3 rootL2_10329950 3300003322 Bacteria 1352
4 Ga0055526_1000218 3300003771 Bacteria 49706
5 Ga0055537_1000900 3300003773 Bacteria 14074
6 Ga0055536_1000265 3300003781 Bacteria 40334
7 Ga0055534_1000519 3300003784 Bacteria 20776
8 Ga0055528_1000332 3300003790 Bacteria 39798
9 Ga0058692_1001253 3300003856 Bacteria 9671
10 Ga0065712_10128904 3300005290 Bacteria 1573
11 Ga0065715_10162027 3300005293 Bacteria 1620
12 Ga0070658_10020008 3300005327 Bacteria 5360
13 Ga0070658_10056675 3300005327 Bacteria 3186
14 Ga0070683_100140124 3300005329 Bacteria 2291
15 Ga0070670_100089998 3300005331 Bacteria 2638
16 Ga0070670_100351698 3300005331 Bacteria 1294
17 Ga0070680_100000636 3300005336 Bacteria 24427
18 Ga0070660_100032927 3300005339 Bacteria 3904
19 Ga0070661_100000784 3300005344 Bacteria 22881
20 Ga0070661_100161116 3300005344 Bacteria 1699
21 Ga0070668_100041859 3300005347 Bacteria 3509
22 Ga0070675_100098703 3300005354 Archaea 2457
23 Ga0070671_100022788 3300005355 Bacteria 5117
24 Ga0070714_100188795 3300005435 Bacteria 1879
25 Ga0070700_100037741 3300005441 Bacteria 2940
26 Ga0070663_100005494 3300005455 Bacteria 7536
27 Ga0070662_100045414 3300005457 Bacteria 3152
28 Ga0070662_100116122 3300005457 Bacteria 2045
29 Ga0070679_100151406 3300005530 Bacteria 2296
30 Ga0070672_100020627 3300005543 Bacteria 4810
31 Ga0070665_100001904 3300005548 Bacteria 23592
32 Ga0068855_100108737 3300005563 Bacteria 3184
33 Ga0068857_100048024 3300005577 Bacteria 3790
34 Ga0068856_100000999 3300005614 Bacteria 30124
35 Ga0068856_100183660 3300005614 Bacteria 2105
36 Ga0068852_100001328 3300005616 Bacteria 16561
37 Ga0068852_100100217 3300005616 Bacteria 2613
38 Ga0068861_100046493 3300005719 Bacteria 3272
39 Ga0068860_100027201 3300005843 Bacteria 5511
40 Ga0075432_10043146 3300006058 Bacteria 1580
41 Ga0068865_100046739 3300006881 Bacteria 2971
42 Ga0079104_1000592 3300006946 Bacteria 36135
43 Ga0105251_10011245 3300009011 Bacteria 5123
44 Ga0105251_10108659 3300009011 Bacteria 1265
45 Ga0105244_10000665 3300009036 Bacteria 30168
46 Ga0105244_10026147 3300009036 Bacteria 3162
47 Ga0105250_10009289 3300009092 Bacteria 4146
48 Ga0105250_10039627 3300009092 Bacteria 1889
49 Ga0105240_10005474 3300009093 Bacteria 18925
50 Ga0105243_10007313 3300009148 Bacteria 8492
51 Ga0105241_10343212 3300009174 Bacteria 1294
52 Ga0105248_10001677 3300009177 Bacteria 24650
53 Ga0105237_10126806 3300009545 Bacteria 2547
54 Ga0105238_10462279 3300009551 Bacteria 1267
55 Ga0105239_10204498 3300010375 Bacteria 2213
56 Ga0105246_10027025 3300011119 Bacteria 3756
57 Ga0157373_10000625 3300013100 Bacteria 27712
58 Ga0157373_10015923 3300013100 Bacteria 5490
59 Ga0157373_10023757 3300013100 Bacteria 4442
60 Ga0157373_10041489 3300013100 Bacteria 3292
61 Ga0157371_10001819 3300013102 Bacteria 21490
62 Ga0157371_10001865 3300013102 Bacteria 21097
63 Ga0157371_10005147 3300013102 Bacteria 11146
64 Ga0157371_10014898 3300013102 Bacteria 5852
65 Ga0157371_10034000 3300013102 Bacteria 3660
66 Ga0157370_10001663 3300013104 Bacteria 27396
67 Ga0157370_10002680 3300013104 Bacteria 21338
68 Ga0157370_10004437 3300013104 Bacteria 16081
69 Ga0157370_10066110 3300013104 Bacteria 3420
70 Ga0157370_10110264 3300013104 Bacteria 2573
71 Ga0157370_10165865 3300013104 Bacteria 2054
72 Ga0157370_10194885 3300013104 Bacteria 1881
73 Ga0157369_10001654 3300013105 Bacteria 27182
74 Ga0157369_10002535 3300013105 Bacteria 21833
75 Ga0157369_10004392 3300013105 Bacteria 16647
76 Ga0157369_10005624 3300013105 Bacteria 14561
77 Ga0157369_10007046 3300013105 Bacteria 12963
78 Ga0157369_10015052 3300013105 Bacteria 8730
79 Ga0157369_10089226 3300013105 Bacteria 3292
80 Ga0157369_10210766 3300013105 Bacteria 2036
81 Ga0157369_10294380 3300013105 Bacteria 1689
82 Ga0157374_10000102 3300013296 Bacteria 78555
83 Ga0157374_10000780 3300013296 Bacteria 27887
84 Ga0157378_10002674 3300013297 Bacteria 15872
85 Ga0163162_10006037 3300013306 Bacteria 11727
86 Ga0157372_10096975 3300013307 Bacteria 3361
87 Ga0157372_10349867 3300013307 Bacteria 1721
88 Ga0157375_10135931 3300013308 Bacteria 2582
89 Ga0182006_1051698 3300015261 Bacteria 1580
90 Ga0182007_10029866 3300015262 Bacteria 1865
91 Ga0163161_10000938 3300017792 Bacteria 22429
92 Ga0163161_10001164 3300017792 Bacteria 19773
93 Ga0163161_10001227 3300017792 Bacteria 19219
94 Ga0163161_10053486 3300017792 Bacteria 2928
95 Ga0163161_10131092 3300017792 Bacteria 1891
96 Ga0209672_100489 3300025228 Bacteria 22048
97 Ga0209759_1003670 3300025256 Bacteria 6026
98 Ga0209565_1000037 3300025263 Bacteria 289371
99 Ga0209673_1000032 3300025273 Bacteria 339956
100 Ga0209675_1000020 3300025291 Bacteria 335854
101 Ga0209676_1000223 3300025292 Bacteria 124359
102 Ga0209564_1000210 3300025295 Bacteria 133323
103 Ga0209050_1029093 3300025298 Bacteria 1776
104 Ga0209256_1001437 3300025299 Bacteria 24667
105 Ga0207696_1004745 3300025711 Bacteria 5787
106 Ga0207696_1005418 3300025711 Bacteria 5298
107 Ga0207655_1001324 3300025728 Bacteria 23396
108 Ga0207655_1013512 3300025728 Bacteria 4684
109 Ga0207713_1036580 3300025735 Bacteria 2104
110 Ga0207647_10001043 3300025904 Bacteria 21440
111 Ga0207647_10052298 3300025904 Bacteria 2521
112 Ga0207705_10032554 3300025909 Bacteria 3726
113 Ga0207705_10044991 3300025909 Bacteria 3173
114 Ga0207695_10005445 3300025913 Bacteria 16875
115 Ga0207660_10001055 3300025917 Bacteria 18262
116 Ga0207657_10044392 3300025919 Bacteria 3907
117 Ga0207649_10000557 3300025920 Bacteria 25678
118 Ga0207650_10378883 3300025925 Bacteria 1168
119 Ga0207659_10235106 3300025926 Archaea 1480
120 Ga0207709_10004085 3300025935 Bacteria 8494
121 Ga0207691_10061014 3300025940 Bacteria 3425
122 Ga0207711_10004514 3300025941 Bacteria 11856
123 Ga0207667_10006206 3300025949 Bacteria 14509
124 Ga0207667_10132077 3300025949 Bacteria 2572
125 Ga0207678_10020518 3300026067 Bacteria 5793
126 Ga0207702_10000730 3300026078 Bacteria 35149
127 Ga0207648_10023179 3300026089 Bacteria 5568
128 Ga0207674_10074319 3300026116 Bacteria 3411
129 Ga0207675_100181532 3300026118 Bacteria 2015
130 Ga0207698_10007998 3300026142 Bacteria 6663
131 Ga0209281_1000667 3300027111 Bacteria 36058
132 Ga0209371_1000832 3300027312 Bacteria 25391
133 Ga0207428_10068087 3300027907 Bacteria 2801
134 Ga0268266_10000370 3300028379 Bacteria 69264
135 Ga0268265_10045117 3300028380 Bacteria 3287
136 Ga0268264_10007550 3300028381 Bacteria 9070
137 Ga0265324_10002998 3300029957 Bacteria 8253
138 Ga0268256_1000815 3300030500 Bacteria 22341
139 Ga0307511_10093164 3300030521 Bacteria 2027
140 Ga0307413_10385396 3300031824 Unclassified 1093
141 Ga0307410_10037250 3300031852 Bacteria 3175
142 Ga0307410_10186057 3300031852 Bacteria 1576
143 Ga0307407_10142571 3300031903 Bacteria 1547
144 Ga0307412_10002272 3300031911 Bacteria 10631
145 Ga0307412_10170803 3300031911 Bacteria 1625
146 Ga0307416_100066369 3300032002 Bacteria 2970
147 Ga0307414_10250264 3300032004 Unclassified 1472
148 Ga0307414_10284746 3300032004 Bacteria 1390
149 Ga0307411_10099150 3300032005 Bacteria 2055
150 Ga0307415_100070703 3300032126 Bacteria 2451
151 Ga0395899_0000977 3300037312 Bacteria 26396
152 Ga0395899_0004118 3300037312 Bacteria 11451
153 Ga0395899_0009965 3300037312 Bacteria 7288
154 Ga0395900_0087354 3300037418 Bacteria 3205
155 Ga0395900_0242171 3300037418 Bacteria 1809
156 Ga0395900_0519024 3300037418 Unclassified 1139
157 Ga0395898_0110086 3300037466 Bacteria 2640
158 Ga0395898_0241585 3300037466 Unclassified 1722
159 Ga0395905_0043339 3300037471 Bacteria 4221
160 Ga0395905_0085994 3300037471 Unclassified 2946
161 Ga0395905_0191323 3300037471 Bacteria 1919
162 Ga0395905_0208199 3300037471 Bacteria 1833
163 Ga0395901_0023732 3300038443 Bacteria 6289
164 Ga0395901_0110192 3300038443 Bacteria 2890
165 Ga0395901_0114509 3300038443 Bacteria 2832
166 Ga0436361_0070740 3300039447 Bacteria 2122
167 Ga0439438_000002 3300041405 Bacteria 618223
168 Ga0439447_000084 3300041407 Bacteria 33114
169 Ga0439466_0000001 3300041411 Bacteria 647258
170 Ga0439445_0015087 3300042004 Bacteria 1888
171 Ga0439448_0017988 3300042005 Bacteria 2161
172 Ga0439432_000295 3300042006 Bacteria 17930
173 Ga0439456_016578 3300042013 Bacteria 1541
174 Ga0439464_0049509 3300042439 Bacteria 1212
175 Ga0466969_0007501 3300044656 Bacteria 5800
176 Ga0466969_0044558 3300044656 Bacteria 2205
177 Ga0466972_0122818 3300044658 Bacteria 1224
178 Ga0466966_0018021 3300044684 Bacteria 4663
179 Ga0466966_0102594 3300044684 Bacteria 1768
180 Ga0466961_0002662 3300044693 Bacteria 11074
181 Ga0466961_0008168 3300044693 Bacteria 6668
182 Ga0466971_0003382 3300044719 Bacteria 6813
183 Ga0466959_0000502 3300045049 Bacteria 22691
184 Ga0466959_0065367 3300045049 Bacteria 2639
185 Ga0466958_0002410 3300045836 Bacteria 9367
186 Ga0466967_0002192 3300045976 Bacteria 12017
187 Ga0495591_000180 3300046458 Bacteria 65553
188 Ga0495591_000210 3300046458 Bacteria 59177
189 Ga0495638_0118821 3300046460 Bacteria 1564
190 Ga0495596_0005996 3300046500 Bacteria 5669
191 Ga0495607_0000050 3300046501 Bacteria 120052
192 Ga0495607_0000641 3300046501 Bacteria 33969
193 Ga0495607_0038364 3300046501 Bacteria 2870
194 Ga0495637_0000117 3300046520 Bacteria 58356
195 Ga0495648_0000600 3300046524 Bacteria 38533
196 Ga0495654_0000009 3300046530 Bacteria 381872
197 Ga0495654_0001896 3300046530 Bacteria 13905
198 Ga0495661_0001560 3300046665 Bacteria 18884
199 Ga0495660_0002473 3300046810 Bacteria 11777
200 Ga0495660_0003481 3300046810 Bacteria 9713
201 Ga0495660_0043073 3300046810 Bacteria 2491
202 Ga0495636_0001353 3300047318 Bacteria 9308
203 Ga0495672_0000015 3300047320 Bacteria 502855
204 Ga0495672_0050245 3300047320 Bacteria 2463
205 Ga0495683_0001022 3300047323 Bacteria 19483
206 Ga0495673_0034053 3300047469 Bacteria 2357
207 Ga0495673_0086647 3300047469 Bacteria 1287
208 Ga0496102_0399688 3300048905 Bacteria 1292
209 Ga0496105_0105368 3300048908 Bacteria 2328
210 Ga0496116_0010613 3300048919 Bacteria 7703
211 Ga0496116_0026556 3300048919 Bacteria 4232
212 Ga0496116_0044955 3300048919 Bacteria 2993
213 Ga0496117_0001742 3300048920 Bacteria 30028
214 Ga0496117_0016308 3300048920 Bacteria 6276
215 Ga0496117_0034615 3300048920 Bacteria 3803
216 Ga0496118_0002049 3300048921 Bacteria 28483
217 Ga0496118_0012786 3300048921 Bacteria 8013
218 Ga0496118_0052721 3300048921 Bacteria 3099
219 Ga0496118_0074435 3300048921 Bacteria 2427
220 Ga0496119_0003463 3300048922 Bacteria 16376
221 Ga0496119_0004253 3300048922 Bacteria 14348
222 Ga0496119_0055556 3300048922 Bacteria 2404
223 Ga0496120_0000711 3300048923 Bacteria 48821
224 Ga0496121_0003798 3300048924 Bacteria 21061
225 Ga0496121_0008624 3300048924 Bacteria 11933
226 Ga0496122_0000216 3300048925 Bacteria 128675
227 Ga0496122_0007304 3300048925 Bacteria 12340
228 Ga0496122_0027066 3300048925 Bacteria 4916
229 Ga0496123_0000233 3300048926 Bacteria 112582
230 Ga0496123_0010301 3300048926 Bacteria 8292
231 Ga0496123_0018638 3300048926 Bacteria 5506
232 Ga0496123_0025517 3300048926 Bacteria 4453
233 Ga0496123_0153387 3300048926 Bacteria 1239
234 Ga0496124_0000484 3300048927 Bacteria 68281
235 Ga0496124_0012993 3300048927 Bacteria 8164
236 Ga0496124_0212660 3300048927 Bacteria 1462
237 Ga0496125_0005148 3300048928 Bacteria 14705
238 Ga0496125_0027151 3300048928 Bacteria 5197
239 Ga0495678_000192 3300049459 Bacteria 71600
240 nmdc:mga00v17_179912_c1 3300050491 Bacteria 1364
241 Ga0466962_0003762 3300061719 Bacteria 7248

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300025263 Ga0209565_1000037 Ga0209565_100003780 246
2 3300025273 Ga0209673_1000032 Ga0209673_1000032184 246
3 3300025291 Ga0209675_1000020 Ga0209675_1000020115 246
4 3300025295 Ga0209564_1000210 Ga0209564_10002108 246
5 3300017792 Ga0163161_10000938 Ga0163161_1000093812 265
6 3300025298 Ga0209050_1029093 Ga0209050_10290932 265
7 3300048926 Ga0496123_0018638 Ga0496123_0018638_424_1368 265
8 3300048928 Ga0496125_0027151 Ga0496125_0027151_214_1158 265
9 3300048908 Ga0496105_0105368 Ga0496105_0105368_1316_2134 268
10 3300048922 Ga0496119_0003463 Ga0496119_0003463_8461_9279 268
11 3300047318 Ga0495636_0001353 Ga0495636_0001353_2451_3275 271
12 3300045976 Ga0466967_0002192 Ga0466967_0002192_10734_11630 274
13 3300050491 nmdc:mga00v17_179912_c1 nmdc:mga00v17_179912_c1_32_868 276
14 3300029957 Ga0265324_10002998 Ga0265324_100029981 282
15 3300048925 Ga0496122_0007304 Ga0496122_0007304_2491_3381 286
16 3300048926 Ga0496123_0010301 Ga0496123_0010301_847_1737 286
17 3300013104 Ga0157370_10002680 Ga0157370_100026808 287
18 3300013105 Ga0157369_10005624 Ga0157369_1000562411 287
19 3300048924 Ga0496121_0008624 Ga0496121_0008624_6861_7751 287
20 3300048928 Ga0496125_0005148 Ga0496125_0005148_3782_4672 287
21 iso_pu_bacteria 2981990288 2981994168 287
22 3300003771 Ga0055526_1000218 Ga0055526_100021819 288
23 3300003773 Ga0055537_1000900 Ga0055537_10009008 288
24 3300003784 Ga0055534_1000519 Ga0055534_10005199 288
25 3300003790 Ga0055528_1000332 Ga0055528_100033231 288
26 3300017792 Ga0163161_10001227 Ga0163161_100012278 288
27 3300025299 Ga0209256_1001437 Ga0209256_10014379 288
28 iso_pu_bacteria 2791355137 2792839629 288
29 iso_pu_bacteria 2902682994 2902683318 288
30 3300025256 Ga0209759_1003670 Ga0209759_10036704 289
31 iso_pu_bacteria 2510065053 2510282885 289
32 iso_pu_bacteria 2510065055 2510293562 289
33 iso_pu_bacteria 2510065058 2510310835 289
34 iso_pu_bacteria 2773857672 2774129055 289
35 3300009174 Ga0105241_10343212 Ga0105241_103432122 290
36 3300009545 Ga0105237_10126806 Ga0105237_101268063 290
37 3300013105 Ga0157369_10015052 Ga0157369_100150523 290
38 3300013296 Ga0157374_10000102 Ga0157374_1000010232 290
39 3300025228 Ga0209672_100489 Ga0209672_10048925 290
40 3300025904 Ga0207647_10052298 Ga0207647_100522982 290
41 3300025949 Ga0207667_10132077 Ga0207667_101320772 290
42 3300042005 Ga0439448_0017988 Ga0439448_0017988_1226_2107 290
43 3300046501 Ga0495607_0000050 Ga0495607_0000050_86464_87351 290
44 3300003781 Ga0055536_1000265 Ga0055536_100026519 292
45 3300006058 Ga0075432_10043146 Ga0075432_100431462 292
46 3300006946 Ga0079104_1000592 Ga0079104_100059220 292
47 3300009036 Ga0105244_10000665 Ga0105244_1000066519 292
48 3300013100 Ga0157373_10023757 Ga0157373_100237574 292
49 3300013102 Ga0157371_10001865 Ga0157371_100018659 292
50 3300013104 Ga0157370_10001663 Ga0157370_1000166310 292
51 3300013105 Ga0157369_10007046 Ga0157369_100070465 292
52 3300013105 Ga0157369_10210766 Ga0157369_102107662 292
53 3300017792 Ga0163161_10131092 Ga0163161_101310922 292
54 3300025292 Ga0209676_1000223 Ga0209676_1000223105 292
55 3300025728 Ga0207655_1001324 Ga0207655_100132410 292
56 3300027111 Ga0209281_1000667 Ga0209281_100066715 292
57 3300027907 Ga0207428_10068087 Ga0207428_100680873 292
58 3300031911 Ga0307412_10002272 Ga0307412_1000227210 292
59 3300041407 Ga0439447_000084 Ga0439447_000084_18194_19090 292
60 3300042004 Ga0439445_0015087 Ga0439445_0015087_503_1399 292
61 3300046458 Ga0495591_000180 Ga0495591_000180_15178_16074 292
62 3300046520 Ga0495637_0000117 Ga0495637_0000117_18520_19416 292
63 3300046810 Ga0495660_0043073 Ga0495660_0043073_1445_2341 292
64 3300047469 Ga0495673_0034053 Ga0495673_0034053_194_1090 292
65 3300048905 Ga0496102_0399688 Ga0496102_0399688_225_1121 292
66 3300048927 Ga0496124_0012993 Ga0496124_0012993_925_1821 292
67 3300049459 Ga0495678_000192 Ga0495678_000192_31299_32195 292
68 iso_pu_bacteria 2713897148 2715751263 292
69 iso_pu_bacteria 2738541271 2738691096 292
70 iso_pu_bacteria 2738543016 2739266767 292
71 iso_pu_bacteria 2842832357 2842836555 292
72 iso_pu_bacteria 2842843487 2842844668 292
73 iso_pu_bacteria 2857576091 2857577819 292
74 iso_pu_bacteria 2919487758 2919489781 292
75 iso_pu_bacteria 2974289157 2974289906 292
76 iso_pu_bacteria 8056172158 8056173235 292
77 3300005327 Ga0070658_10056675 Ga0070658_100566754 293
78 3300009177 Ga0105248_10001677 Ga0105248_1000167719 293
79 3300010375 Ga0105239_10204498 Ga0105239_102044982 293
80 3300013100 Ga0157373_10000625 Ga0157373_1000062515 293
81 3300013102 Ga0157371_10001819 Ga0157371_100018194 293
82 3300013102 Ga0157371_10005147 Ga0157371_100051476 293
83 3300013104 Ga0157370_10066110 Ga0157370_100661101 293
84 3300013105 Ga0157369_10001654 Ga0157369_1000165410 293
85 3300025941 Ga0207711_10004514 Ga0207711_100045145 293
86 3300030521 Ga0307511_10093164 Ga0307511_100931642 293
87 3300039447 Ga0436361_0070740 Ga0436361_0070740_243_1145 293
88 3300042013 Ga0439456_016578 Ga0439456_016578_528_1424 293
89 3300044656 Ga0466969_0007501 Ga0466969_0007501_2261_3166 293
90 3300044684 Ga0466966_0102594 Ga0466966_0102594_500_1405 293
91 3300044693 Ga0466961_0002662 Ga0466961_0002662_6095_7000 293
92 3300046458 Ga0495591_000210 Ga0495591_000210_19101_20000 293
93 3300046500 Ga0495596_0005996 Ga0495596_0005996_4165_5064 293
94 3300046501 Ga0495607_0000641 Ga0495607_0000641_19050_19946 293
95 3300046501 Ga0495607_0038364 Ga0495607_0038364_1162_2061 293
96 3300046524 Ga0495648_0000600 Ga0495648_0000600_19389_20288 293
97 3300046665 Ga0495661_0001560 Ga0495661_0001560_10835_11731 293
98 3300046810 Ga0495660_0003481 Ga0495660_0003481_16_912 293
99 3300047323 Ga0495683_0001022 Ga0495683_0001022_8908_9804 293
100 3300048920 Ga0496117_0001742 Ga0496117_0001742_18149_19045 293
101 3300048921 Ga0496118_0002049 Ga0496118_0002049_9431_10327 293
102 3300048926 Ga0496123_0153387 Ga0496123_0153387_241_1137 293
103 iso_pu_bacteria 2608642108 2608669897 293
104 3300003856 Ga0058692_1001253 Ga0058692_10012538 294
105 3300005347 Ga0070668_100041859 Ga0070668_1000418594 294
106 3300005457 Ga0070662_100116122 Ga0070662_1001161222 294
107 3300009011 Ga0105251_10011245 Ga0105251_100112452 294
108 3300009011 Ga0105251_10108659 Ga0105251_101086592 294
109 3300009036 Ga0105244_10026147 Ga0105244_100261473 294
110 3300009092 Ga0105250_10009289 Ga0105250_100092893 294
111 3300009092 Ga0105250_10039627 Ga0105250_100396271 294
112 3300011119 Ga0105246_10027025 Ga0105246_100270253 294
113 3300013100 Ga0157373_10015923 Ga0157373_100159233 294
114 3300013102 Ga0157371_10014898 Ga0157371_100148983 294
115 3300013104 Ga0157370_10110264 Ga0157370_101102642 294
116 3300013104 Ga0157370_10194885 Ga0157370_101948852 294
117 3300013105 Ga0157369_10294380 Ga0157369_102943802 294
118 3300013307 Ga0157372_10096975 Ga0157372_100969752 294
119 3300013307 Ga0157372_10349867 Ga0157372_103498671 294
120 3300015261 Ga0182006_1051698 Ga0182006_10516982 294
121 3300015262 Ga0182007_10029866 Ga0182007_100298662 294
122 3300017792 Ga0163161_10053486 Ga0163161_100534863 294
123 3300025711 Ga0207696_1004745 Ga0207696_10047454 294
124 3300025711 Ga0207696_1005418 Ga0207696_10054183 294
125 3300025728 Ga0207655_1013512 Ga0207655_10135123 294
126 3300025735 Ga0207713_1036580 Ga0207713_10365802 294
127 3300027312 Ga0209371_1000832 Ga0209371_100083216 294
128 3300030500 Ga0268256_1000815 Ga0268256_100081513 294
129 3300041405 Ga0439438_000002 Ga0439438_000002_164774_165676 294
130 3300041411 Ga0439466_0000001 Ga0439466_0000001_202719_203621 294
131 3300042006 Ga0439432_000295 Ga0439432_000295_5530_6432 294
132 3300042439 Ga0439464_0049509 Ga0439464_0049509_91_993 294
133 3300046460 Ga0495638_0118821 Ga0495638_0118821_650_1534 294
134 3300046530 Ga0495654_0000009 Ga0495654_0000009_107283_108185 294
135 3300046530 Ga0495654_0001896 Ga0495654_0001896_10593_11489 294
136 3300046810 Ga0495660_0002473 Ga0495660_0002473_1707_2609 294
137 3300047320 Ga0495672_0000015 Ga0495672_0000015_459977_460879 294
138 3300047469 Ga0495673_0086647 Ga0495673_0086647_237_1133 294
139 3300048919 Ga0496116_0010613 Ga0496116_0010613_4395_5297 294
140 3300048919 Ga0496116_0026556 Ga0496116_0026556_2271_3173 294
141 3300048919 Ga0496116_0044955 Ga0496116_0044955_1032_1934 294
142 3300048920 Ga0496117_0016308 Ga0496117_0016308_2379_3281 294
143 3300048920 Ga0496117_0034615 Ga0496117_0034615_2465_3367 294
144 3300048921 Ga0496118_0012786 Ga0496118_0012786_4733_5635 294
145 3300048921 Ga0496118_0052721 Ga0496118_0052721_1981_2883 294
146 3300048921 Ga0496118_0074435 Ga0496118_0074435_1171_2073 294
147 3300048922 Ga0496119_0004253 Ga0496119_0004253_376_1278 294
148 3300048922 Ga0496119_0055556 Ga0496119_0055556_15_917 294
149 3300048923 Ga0496120_0000711 Ga0496120_0000711_34784_35686 294
150 3300048925 Ga0496122_0027066 Ga0496122_0027066_1793_2695 294
151 3300048926 Ga0496123_0025517 Ga0496123_0025517_3176_4078 294
152 3300048927 Ga0496124_0000484 Ga0496124_0000484_54758_55660 294
153 3300048927 Ga0496124_0212660 Ga0496124_0212660_80_982 294
154 iso_pu_bacteria 2600255067 2600812700 294
155 3300048924 Ga0496121_0003798 Ga0496121_0003798_8729_9649 295
156 iso_pu_bacteria 2515154123 2515688522 295
157 3300037312 Ga0395899_0009965 Ga0395899_0009965_3538_4431 297
158 3300037471 Ga0395905_0085994 Ga0395905_0085994_389_1282 297
159 3300038443 Ga0395901_0023732 Ga0395901_0023732_2274_3167 297
160 3300044656 Ga0466969_0044558 Ga0466969_0044558_767_1741 297
161 3300045049 Ga0466959_0065367 Ga0466959_0065367_1072_2046 297
162 3300003322 rootL2_10329950 rootL2_103299502 298
163 3300005331 Ga0070670_100351698 Ga0070670_1003516982 298
164 3300005355 Ga0070671_100022788 Ga0070671_1000227884 298
165 3300005548 Ga0070665_100001904 Ga0070665_1000019048 298
166 3300017792 Ga0163161_10001164 Ga0163161_100011646 298
167 3300025925 Ga0207650_10378883 Ga0207650_103788831 298
168 3300025940 Ga0207691_10061014 Ga0207691_100610143 298
169 3300028379 Ga0268266_10000370 Ga0268266_1000037011 298
170 3300037312 Ga0395899_0000977 Ga0395899_0000977_17006_17902 298
171 3300037418 Ga0395900_0519024 Ga0395900_0519024_88_984 298
172 3300037466 Ga0395898_0241585 Ga0395898_0241585_156_1052 298
173 3300037471 Ga0395905_0043339 Ga0395905_0043339_1687_2583 298
174 3300038443 Ga0395901_0110192 Ga0395901_0110192_772_1668 298
175 3300048925 Ga0496122_0000216 Ga0496122_0000216_55717_56613 298
176 3300048926 Ga0496123_0000233 Ga0496123_0000233_55775_56671 298
177 3300001915 JGI24741J21665_1002894 JGI24741J21665_10028943 299
178 3300003320 rootH2_10018794 rootH2_100187945 299
179 3300005290 Ga0065712_10128904 Ga0065712_101289042 299
180 3300005293 Ga0065715_10162027 Ga0065715_101620272 299
181 3300005327 Ga0070658_10020008 Ga0070658_100200083 299
182 3300005329 Ga0070683_100140124 Ga0070683_1001401241 299
183 3300005331 Ga0070670_100089998 Ga0070670_1000899984 299
184 3300005336 Ga0070680_100000636 Ga0070680_1000006367 299
185 3300005339 Ga0070660_100032927 Ga0070660_1000329272 299
186 3300005344 Ga0070661_100000784 Ga0070661_10000078414 299
187 3300005344 Ga0070661_100161116 Ga0070661_1001611162 299
188 3300005354 Ga0070675_100098703 Ga0070675_1000987032 299
189 3300005435 Ga0070714_100188795 Ga0070714_1001887952 299
190 3300005441 Ga0070700_100037741 Ga0070700_1000377413 299
191 3300005455 Ga0070663_100005494 Ga0070663_1000054944 299
192 3300005457 Ga0070662_100045414 Ga0070662_1000454142 299
193 3300005530 Ga0070679_100151406 Ga0070679_1001514062 299
194 3300005543 Ga0070672_100020627 Ga0070672_1000206274 299
195 3300005563 Ga0068855_100108737 Ga0068855_1001087373 299
196 3300005577 Ga0068857_100048024 Ga0068857_1000480243 299
197 3300005614 Ga0068856_100000999 Ga0068856_1000009997 299
198 3300005614 Ga0068856_100183660 Ga0068856_1001836602 299
199 3300005616 Ga0068852_100001328 Ga0068852_1000013288 299
200 3300005616 Ga0068852_100100217 Ga0068852_1001002172 299
201 3300005719 Ga0068861_100046493 Ga0068861_1000464933 299
202 3300005843 Ga0068860_100027201 Ga0068860_1000272014 299
203 3300006881 Ga0068865_100046739 Ga0068865_1000467391 299
204 3300009093 Ga0105240_10005474 Ga0105240_100054745 299
205 3300009148 Ga0105243_10007313 Ga0105243_100073138 299
206 3300009551 Ga0105238_10462279 Ga0105238_104622792 299
207 3300013100 Ga0157373_10041489 Ga0157373_100414892 299
208 3300013102 Ga0157371_10034000 Ga0157371_100340003 299
209 3300013104 Ga0157370_10004437 Ga0157370_1000443712 299
210 3300013104 Ga0157370_10165865 Ga0157370_101658652 299
211 3300013105 Ga0157369_10002535 Ga0157369_100025352 299
212 3300013105 Ga0157369_10004392 Ga0157369_100043923 299
213 3300013105 Ga0157369_10089226 Ga0157369_100892263 299
214 3300013296 Ga0157374_10000780 Ga0157374_1000078012 299
215 3300013297 Ga0157378_10002674 Ga0157378_100026744 299
216 3300013306 Ga0163162_10006037 Ga0163162_100060373 299
217 3300013308 Ga0157375_10135931 Ga0157375_101359313 299
218 3300025904 Ga0207647_10001043 Ga0207647_100010438 299
219 3300025909 Ga0207705_10032554 Ga0207705_100325543 299
220 3300025909 Ga0207705_10044991 Ga0207705_100449912 299
221 3300025913 Ga0207695_10005445 Ga0207695_100054453 299
222 3300025917 Ga0207660_10001055 Ga0207660_1000105515 299
223 3300025919 Ga0207657_10044392 Ga0207657_100443922 299
224 3300025920 Ga0207649_10000557 Ga0207649_1000055722 299
225 3300025926 Ga0207659_10235106 Ga0207659_102351062 299
226 3300025935 Ga0207709_10004085 Ga0207709_100040853 299
227 3300025949 Ga0207667_10006206 Ga0207667_100062069 299
228 3300026067 Ga0207678_10020518 Ga0207678_100205183 299
229 3300026078 Ga0207702_10000730 Ga0207702_1000073010 299
230 3300026089 Ga0207648_10023179 Ga0207648_100231792 299
231 3300026116 Ga0207674_10074319 Ga0207674_100743192 299
232 3300026118 Ga0207675_100181532 Ga0207675_1001815322 299
233 3300026142 Ga0207698_10007998 Ga0207698_100079983 299
234 3300028380 Ga0268265_10045117 Ga0268265_100451173 299
235 3300028381 Ga0268264_10007550 Ga0268264_100075503 299
236 3300031824 Ga0307413_10385396 Ga0307413_103853962 299
237 3300031852 Ga0307410_10037250 Ga0307410_100372502 299
238 3300031852 Ga0307410_10186057 Ga0307410_101860572 299
239 3300031903 Ga0307407_10142571 Ga0307407_101425712 299
240 3300031911 Ga0307412_10170803 Ga0307412_101708032 299
241 3300032002 Ga0307416_100066369 Ga0307416_1000663692 299
242 3300032004 Ga0307414_10250264 Ga0307414_102502642 299
243 3300032004 Ga0307414_10284746 Ga0307414_102847462 299
244 3300032005 Ga0307411_10099150 Ga0307411_100991502 299
245 3300032126 Ga0307415_100070703 Ga0307415_1000707033 299
246 3300037312 Ga0395899_0004118 Ga0395899_0004118_768_1667 299
247 3300037418 Ga0395900_0087354 Ga0395900_0087354_550_1449 299
248 3300037418 Ga0395900_0242171 Ga0395900_0242171_527_1426 299
249 3300037466 Ga0395898_0110086 Ga0395898_0110086_1476_2375 299
250 3300037471 Ga0395905_0191323 Ga0395905_0191323_21_920 299
251 3300037471 Ga0395905_0208199 Ga0395905_0208199_565_1464 299
252 3300038443 Ga0395901_0114509 Ga0395901_0114509_1838_2737 299
253 3300044658 Ga0466972_0122818 Ga0466972_0122818_196_1095 299
254 3300044684 Ga0466966_0018021 Ga0466966_0018021_3331_4230 299
255 3300044693 Ga0466961_0008168 Ga0466961_0008168_1973_2935 299
256 3300044719 Ga0466971_0003382 Ga0466971_0003382_3882_4844 299
257 3300045049 Ga0466959_0000502 Ga0466959_0000502_17749_18711 299
258 3300045836 Ga0466958_0002410 Ga0466958_0002410_5288_6250 299
259 3300047320 Ga0495672_0050245 Ga0495672_0050245_1341_2288 299
260 3300061719 Ga0466962_0003762 Ga0466962_0003762_2817_3779 299

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

17

242

0.91

PF04321

RmlD_sub_bind

RmlD substrate binding domain

15

266

0.87

PF16363

GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

18

307

0.86

PF07993

NAD_binding_4

Male sterility protein

68

226

0.76

PF01073

3Beta_HSD

3-beta hydroxysteroid dehydrogenase/isomerase family

18

269

0.69

Structural Annotation

Top 5 Hits

ID Description Score Start End
4lw8-assembly1.cif.gz_B crystal structure of a putative epimerase from burkholderia cenocepacia j2315 0.9472 3 297
5x6r-assembly2.cif.gz_B crystal structure of saccharomyces cerevisiae kmo in complex with ro 61-8048 0.933 4 31
4h2n-assembly1.cif.gz_A crystal structure of mhpco, y270f mutant 0.9298 1 32
4lw8-assembly1.cif.gz_B crystal structure of a putative epimerase from burkholderia cenocepacia j2315 0.9286 3 297
3alm-assembly2.cif.gz_B crystal structure of 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase, mutant c294a 0.9241 1 32
ID Description Score Start End Superfamily
4lw8B02 Alpha Beta;Alpha-Beta Complex;UDP-galactose 4-epimerase; domain 1;UDP-galactose 4-epimerase, domain 1 0.9587 174 297 3.90.25.10
af_Q0D7W4_71_358_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9437 2 32 3.50.50.60
3i3lA01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9349 2 31 3.50.50.60
3gmbB01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9262 1 32 3.50.50.60
af_Q54H02_2_246_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9249 4 32 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A0J7XZX2-F1-model_v4 GDP-6-deoxy-D-lyxo-4-hexulose reductase 0.9872 1 298
AF-A0A6P2Y065-F1-model_v4 GDP-6-deoxy-D-lyxo-4-hexulose reductase 0.9783 128 297
AF-A0A1A6C603-F1-model_v4 UDP-glucose 4-epimerase 0.9698 18 298
AF-Q0K7P6-F1-model_v4 Nucleoside-diphosphate-sugar epimerase (EC 5.1.3.-) 0.9642 37 298 GO:0016853
AF-A0A3D4KPF5-F1-model_v4 Epimerase 0.9629 1 298

Feature Viewer

pLDDT pTM Quality
93.22 0.92 High
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Predicted Structure (AlphaFold2)

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