F369718

General Info

Members Datasets Scaffolds Average Seq Length
260 100 201 312

Family's Representative Sequence

Representative Sequence 3300039062|Ga0400483_014433|Ga0400483_014433_181_1284
Length 358
Sequence MALHLFIHYIKLIYICLPKVSAPLAEQHNSALLTQRGYAGDKHMSNLMRSIDDRTRLAGTNRLEVLLFSLGKDSNTQREEVFGINVFKVREVMHMPDEVEGMVSLRGVMVPVINLSKFCGVSTDAPPQILMITEYNTHVQGFLVNSVDTIERLDWEDVKAPPPMLTKRLGGLLTAVAELENDCLVMILDVERVLAETGGFYENEHVFDGVEKHEADEHITVLFADDSSVARGQIAKTLEHMGIEYISAKTGAEAWAKLNELAEHAEATGKSISDRIQFILTDVEMPEMDGYVLTRNVKKDSRFDDIPVIMHSSLTSEANKALGKGVGADAYVPKFQPKELSGTLNKLIQERHIHGSED

Samples

Sample ID Description Type Environment
1 2526164512 Azovibrio restrictus DSM 23866 Isolate Unclassified
2 2547132103 Chromobacterium sp. C-61 Isolate Rhizosphere
3 2547132512 Azospira oryzae 6a3 Isolate Unclassified
4 2574179768 Azoarcus communis DSM 12120 Isolate Unclassified
5 2843690924 Chromobacterium rhizoryzae JP2-74 Isolate Rhizosphere
6 2846033681 Chromobacterium sinusclupearum MWU13-2610 Isolate Rhizosphere
7 2846037992 Chromobacterium alticapitis MWU14-2602 Isolate Rhizosphere
8 2891633521 Azoarcus rhizosphaerae CC-YHH848 Isolate Rhizosphere
9 2998344455 Vogesella urethralis SLBN-145 Isolate Rhizosphere
10 3300003163 Avena fatua rhizosphere microbial communities - H1_Rhizo_Litter_2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
11 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
12 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
13 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
14 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
15 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
18 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
19 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
20 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
21 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
22 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
23 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
24 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
25 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
26 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
27 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
30 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
31 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
32 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
33 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
34 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
35 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
36 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
37 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
38 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
39 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
49 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
50 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
51 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
52 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
53 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
54 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
55 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
56 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
57 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
58 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
59 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
60 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
61 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
62 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
63 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
64 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
65 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
66 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
67 3300033529 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
68 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
69 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
70 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
71 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
72 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
73 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
74 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
75 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
76 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
77 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
78 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
79 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
80 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
81 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
82 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
83 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
84 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
85 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
86 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
87 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
88 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
89 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
90 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
91 3300049551 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
92 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
93 3300049656 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_B_0_drought Metagenome Rhizosphere
94 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
95 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
96 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
97 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
98 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
99 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere
100 639633007 Azoarcus olearius BH72 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 90.77
Metatranscriptomes 2.31
Isolates 6.92

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.08
Nodule 0
Rhizoplane 2.31
Rhizosphere 71.54
Stem 0
Stem Tuber 0
Unclassified 23.08

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0006759J45824_1092209 3300003163 Bacteria 1063
2 rootH1_10108050 3300003316 Bacteria 2950
3 rootL2_10005977 3300003322 Bacteria 10457
4 Ga0068869_100403824 3300005334 Bacteria 1124
5 Ga0068868_100038334 3300005338 Bacteria 3720
6 Ga0070674_100017828 3300005356 Bacteria 4474
7 Ga0070673_100087232 3300005364 Bacteria 2543
8 Ga0070678_100233586 3300005456 Bacteria 1534
9 Ga0068867_100106911 3300005459 Bacteria 2144
10 Ga0070686_100146830 3300005544 Bacteria 1647
11 Ga0070693_100045055 3300005547 Bacteria 2498
12 Ga0068854_100280753 3300005578 Bacteria 1341
13 Ga0070702_100284640 3300005615 Bacteria 1136
14 Ga0068866_10078437 3300005718 Bacteria 1767
15 Ga0068858_100102623 3300005842 Bacteria 2668
16 Ga0070716_100073166 3300006173 Bacteria 2021
17 Ga0075366_10000114 3300006195 Bacteria 33061
18 Ga0068871_100102993 3300006358 Bacteria 2393
19 Ga0075428_100182480 3300006844 Bacteria 2271
20 Ga0075431_100337418 3300006847 Bacteria 1517
21 Ga0105241_10129596 3300009174 Bacteria 2040
22 Ga0105237_10019942 3300009545 Bacteria 6921
23 Ga0105237_10130770 3300009545 Bacteria 2504
24 Ga0105249_10286733 3300009553 Bacteria 1646
25 Ga0105239_10089174 3300010375 Bacteria 3401
26 Ga0105239_10142166 3300010375 Bacteria 2675
27 Ga0157374_10000796 3300013296 Bacteria 27666
28 Ga0157374_10158015 3300013296 Bacteria 2207
29 Ga0157374_10338858 3300013296 Bacteria 1492
30 Ga0157378_10101662 3300013297 Bacteria 2625
31 Ga0157378_10108477 3300013297 Bacteria 2542
32 Ga0157372_10322248 3300013307 Bacteria 1799
33 Ga0157375_10357415 3300013308 Bacteria 1627
34 Ga0157375_10367997 3300013308 Bacteria 1604
35 Ga0213872_10000851 3300021361 Bacteria 22084
36 Ga0213872_10001765 3300021361 Bacteria 13544
37 Ga0213872_10003607 3300021361 Bacteria 8508
38 Ga0213872_10006523 3300021361 Bacteria 5840
39 Ga0213872_10006786 3300021361 Bacteria 5699
40 Ga0213872_10027143 3300021361 Bacteria 2629
41 Ga0213872_10037528 3300021361 Bacteria 2212
42 Ga0207642_10165368 3300025899 Bacteria 1192
43 Ga0207671_10020046 3300025914 Bacteria 5100
44 Ga0207669_10084268 3300025937 Bacteria 2048
45 Ga0207665_10146496 3300025939 Bacteria 1688
46 Ga0207640_10213240 3300025981 Bacteria 1473
47 Ga0207677_10141256 3300026023 Bacteria 1844
48 Ga0207639_10052830 3300026041 Bacteria 3098
49 Ga0207639_10186301 3300026041 Bacteria 1770
50 Ga0207648_10086187 3300026089 Bacteria 2740
51 Ga0207674_10018873 3300026116 Bacteria 7479
52 Ga0265318_10002714 3300028577 Bacteria 9289
53 Ga0265336_10000441 3300028666 Bacteria 25397
54 Ga0265324_10000023 3300029957 Bacteria 164128
55 Ga0265324_10006228 3300029957 Bacteria 5015
56 Ga0265330_10036306 3300031235 Bacteria 2197
57 Ga0265332_10000010 3300031238 Bacteria 289041
58 Ga0265332_10001011 3300031238 Bacteria 16591
59 Ga0265332_10002034 3300031238 Bacteria 10589
60 Ga0265328_10001156 3300031239 Bacteria 12158
61 Ga0265328_10001608 3300031239 Bacteria 10386
62 Ga0265328_10002027 3300031239 Bacteria 9165
63 Ga0265328_10027393 3300031239 Bacteria 2136
64 Ga0265320_10019801 3300031240 Bacteria 3667
65 Ga0265325_10027352 3300031241 Bacteria 3082
66 Ga0265329_10006452 3300031242 Bacteria 4653
67 Ga0265339_10073678 3300031249 Bacteria 1815
68 Ga0265331_10000044 3300031250 Bacteria 186644
69 Ga0265331_10000820 3300031250 Bacteria 25595
70 Ga0265331_10002959 3300031250 Bacteria 11189
71 Ga0265331_10007645 3300031250 Bacteria 6225
72 Ga0265331_10041701 3300031250 Bacteria 2229
73 Ga0265331_10048704 3300031250 Bacteria 2036
74 Ga0265331_10083119 3300031250 Bacteria 1485
75 Ga0265327_10000065 3300031251 Bacteria 225004
76 Ga0265327_10000102 3300031251 Bacteria 186668
77 Ga0265327_10010547 3300031251 Bacteria 6475
78 Ga0265327_10014140 3300031251 Bacteria 5240
79 Ga0265327_10043663 3300031251 Bacteria 2396
80 Ga0265316_10041755 3300031344 Bacteria 3669
81 Ga0265316_10087544 3300031344 Bacteria 2379
82 Ga0307509_10000031 3300031507 Bacteria 205072
83 Ga0307509_10000407 3300031507 Bacteria 72359
84 Ga0307508_10139506 3300031616 Bacteria 2027
85 Ga0316579_10024684 3300031691 Bacteria 2708
86 Ga0316579_10028057 3300031691 Bacteria 2561
87 Ga0265314_10007370 3300031711 Bacteria 9551
88 Ga0265314_10012374 3300031711 Bacteria 6965
89 Ga0265342_10007465 3300031712 Bacteria 7999
90 Ga0316577_10026258 3300031733 Bacteria 3243
91 Ga0316587_1010759 3300033529 Bacteria 1467
92 Ga0316587_1011595 3300033529 Bacteria 1424
93 Ga0316587_1020095 3300033529 Bacteria 1132
94 Ga0316587_1025584 3300033529 Bacteria 1026
95 Ga0373933_0153438 3300035724 Bacteria 1460
96 Ga0316582_0228108 3300036647 Bacteria 1274
97 Ga0373925_0594868 3300037068 Bacteria 911
98 Ga0400484_26082 3300038725 Bacteria 22611
99 Ga0400490_21814 3300038726 Bacteria 23977
100 Ga0400490_26671 3300038726 Bacteria 24238
101 Ga0400490_28231 3300038726 Bacteria 5797
102 Ga0400490_28655 3300038726 Bacteria 21912
103 Ga0400490_35440 3300038726 Bacteria 9987
104 Ga0400485_01922 3300038735 Bacteria 62762
105 Ga0400485_06748 3300038735 Bacteria 3074
106 Ga0400485_08947 3300038735 Bacteria 16828
107 Ga0400488_15152 3300038741 Bacteria 5090
108 Ga0400488_24343 3300038741 Bacteria 5229
109 Ga0400488_43840 3300038741 Bacteria 2989
110 Ga0400488_46825 3300038741 Bacteria 15754
111 Ga0400488_52876 3300038741 Bacteria 3172
112 Ga0400488_59839 3300038741 Bacteria 35399
113 Ga0400486_03140 3300038742 Bacteria 13609
114 Ga0400486_14401 3300038742 Unclassified 3934
115 Ga0400486_23232 3300038742 Bacteria 285561
116 Ga0400486_27500 3300038742 Bacteria 6860
117 Ga0400483_001456 3300039062 Bacteria 2796
118 Ga0400483_014433 3300039062 Bacteria 1516
119 Ga0400483_015065 3300039062 Bacteria 26280
120 Ga0400483_088915 3300039062 Bacteria 4602
121 Ga0400483_097462 3300039062 Bacteria 21852
122 Ga0400483_101942 3300039062 Unclassified 3664
123 Ga0400483_110847 3300039062 Bacteria 1852
124 Ga0400483_119873 3300039062 Bacteria 11301
125 Ga0400483_159399 3300039062 Bacteria 2714
126 Ga0400483_159993 3300039062 Bacteria 17231
127 Ga0400483_193355 3300039062 Bacteria 2350
128 Ga0400483_259509 3300039062 Bacteria 4124
129 Ga0400483_278015 3300039062 Bacteria 34425
130 Ga0400483_280633 3300039062 Bacteria 1437
131 Ga0400483_287117 3300039062 Bacteria 3137
132 Ga0400489_25470 3300039093 Bacteria 3480
133 Ga0400487_12529 3300039110 Bacteria 19079
134 Ga0400487_13769 3300039110 Bacteria 4374
135 Ga0400487_14673 3300039110 Bacteria 3009
136 Ga0400487_15184 3300039110 Bacteria 3462
137 Ga0400487_21560 3300039110 Bacteria 51887
138 Ga0400487_32651 3300039110 Bacteria 71701
139 Ga0400487_46988 3300039110 Bacteria 6165
140 Ga0400487_56197 3300039110 Bacteria 40143
141 Ga0400487_65881 3300039110 Bacteria 2176
142 Ga0436361_0085197 3300039447 Bacteria 13675
143 Ga0436361_0183078 3300039447 Bacteria 10188
144 Ga0436361_0597072 3300039447 Bacteria 40141
145 Ga0436361_0773457 3300039447 Bacteria 43735
146 Ga0436361_0926033 3300039447 Bacteria 12498
147 Ga0436361_1100774 3300039447 Bacteria 10792
148 Ga0436361_1118556 3300039447 Bacteria 8684
149 Ga0451577_0000284 3300042876 Bacteria 98326
150 Ga0451577_0003496 3300042876 Bacteria 17455
151 Ga0451577_0107899 3300042876 Bacteria 2489
152 Ga0451577_0356590 3300042876 Bacteria 1327
153 Ga0451577_0671380 3300042876 Bacteria 939
154 Ga0453683_0021450 3300044673 Bacteria 4125
155 Ga0453683_0096990 3300044673 Bacteria 1850
156 Ga0466961_0000161 3300044693 Bacteria 45305
157 Ga0453684_0000029 3300044712 Bacteria 757969
158 Ga0453684_0000102 3300044712 Bacteria 366870
159 Ga0453684_0000114 3300044712 Bacteria 356610
160 Ga0453684_0000149 3300044712 Bacteria 307732
161 Ga0453684_0000917 3300044712 Bacteria 97990
162 Ga0453684_0001320 3300044712 Bacteria 73258
163 Ga0453684_0026272 3300044712 Bacteria 8420
164 Ga0453684_0071234 3300044712 Bacteria 4396
165 Ga0453684_0079669 3300044712 Bacteria 4093
166 Ga0453684_0082939 3300044712 Bacteria 3992
167 Ga0453684_0192877 3300044712 Bacteria 2382
168 Ga0466959_0060343 3300045049 Bacteria 2759
169 Ga0466959_0164290 3300045049 Bacteria 1559
170 Ga0451576_0000060 3300045051 Bacteria 290345
171 Ga0451576_0000184 3300045051 Bacteria 157166
172 Ga0451576_0000813 3300045051 Bacteria 61106
173 Ga0451576_0003776 3300045051 Bacteria 20429
174 Ga0451576_0005523 3300045051 Bacteria 15792
175 Ga0451576_0030313 3300045051 Bacteria 5781
176 Ga0451576_0031653 3300045051 Bacteria 5638
177 Ga0451576_0053682 3300045051 Bacteria 4221
178 Ga0451576_0097051 3300045051 Bacteria 3065
179 Ga0451576_0121268 3300045051 Bacteria 2722
180 Ga0451576_0151385 3300045051 Bacteria 2419
181 Ga0451576_0187444 3300045051 Bacteria 2160
182 Ga0451576_0202616 3300045051 Bacteria 2072
183 Ga0451576_0215988 3300045051 Bacteria 2002
184 Ga0451576_0226184 3300045051 Bacteria 1954
185 Ga0451576_0321973 3300045051 Bacteria 1618
186 Ga0451576_0365370 3300045051 Bacteria 1512
187 Ga0496102_0117534 3300048905 Bacteria 2482
188 Ga0496106_0134217 3300048909 Bacteria 1943
189 Ga0496106_0156622 3300048909 Bacteria 1799
190 Ga0496108_0236694 3300048911 Bacteria 1588
191 Ga0496114_0004966 3300048917 Bacteria 10373
192 Ga0496126_0075902 3300048929 Bacteria 2982
193 Ga0501335_006254 3300049551 Bacteria 1081
194 Ga0501076_0026654 3300049592 Bacteria 4479
195 Ga0501209_000068 3300049656 Bacteria 10328
196 Ga0501280_001847 3300049776 Bacteria 3719
197 nmdc:mga0k408_172_c1 3300050493 Bacteria 34042
198 Ga0500559_0013772 3300053136 Bacteria 3421
199 Ga0500636_0000053 3300053177 Bacteria 55579
200 Ga0500637_0060041 3300053178 Bacteria 2177
201 Ga0500625_019295 3300053729 Bacteria 3201

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300037068 Ga0373925_0594868 Ga0373925_0594868_154_891 241
2 3300045051 Ga0451576_0226184 Ga0451576_0226184_24_824 248
3 3300035724 Ga0373933_0153438 Ga0373933_0153438_11_796 250
4 3300009553 Ga0105249_10286733 Ga0105249_102867331 271
5 3300013308 Ga0157375_10357415 Ga0157375_103574152 277
6 3300048909 Ga0496106_0156622 Ga0496106_0156622_25_963 277
7 3300048911 Ga0496108_0236694 Ga0496108_0236694_163_1101 277
8 3300048917 Ga0496114_0004966 Ga0496114_0004966_7973_8911 277
9 3300021361 Ga0213872_10006786 Ga0213872_100067865 278
10 3300021361 Ga0213872_10027143 Ga0213872_100271431 278
11 3300021361 Ga0213872_10037528 Ga0213872_100375283 278
12 3300039447 Ga0436361_0773457 Ga0436361_0773457_38518_39468 278
13 3300039447 Ga0436361_0926033 Ga0436361_0926033_5902_6846 278
14 3300039447 Ga0436361_1100774 Ga0436361_1100774_6562_7512 278
15 3300039447 Ga0436361_1118556 Ga0436361_1118556_2557_3507 278
16 3300005334 Ga0068869_100403824 Ga0068869_1004038241 279
17 3300005544 Ga0070686_100146830 Ga0070686_1001468302 279
18 3300005547 Ga0070693_100045055 Ga0070693_1000450552 279
19 3300005615 Ga0070702_100284640 Ga0070702_1002846401 279
20 3300009174 Ga0105241_10129596 Ga0105241_101295962 279
21 3300009545 Ga0105237_10019942 Ga0105237_100199425 279
22 3300010375 Ga0105239_10089174 Ga0105239_100891742 279
23 3300013307 Ga0157372_10322248 Ga0157372_103222482 279
24 3300025914 Ga0207671_10020046 Ga0207671_100200462 279
25 3300026041 Ga0207639_10052830 Ga0207639_100528303 279
26 3300026116 Ga0207674_10018873 Ga0207674_100188736 279
27 3300044693 Ga0466961_0000161 Ga0466961_0000161_27205_28146 279
28 3300045049 Ga0466959_0060343 Ga0466959_0060343_1768_2709 279
29 3300045049 Ga0466959_0164290 Ga0466959_0164290_602_1543 279
30 3300045051 Ga0451576_0097051 Ga0451576_0097051_1722_2696 279
31 3300044673 Ga0453683_0096990 Ga0453683_0096990_570_1514 280
32 3300045051 Ga0451576_0000060 Ga0451576_0000060_96651_97595 280
33 3300021361 Ga0213872_10003607 Ga0213872_100036077 281
34 3300021361 Ga0213872_10006523 Ga0213872_100065235 281
35 3300039062 Ga0400483_001456 Ga0400483_001456_993_1949 281
36 3300039447 Ga0436361_0085197 Ga0436361_0085197_6143_7096 281
37 3300021361 Ga0213872_10000851 Ga0213872_1000085115 282
38 3300039447 Ga0436361_0597072 Ga0436361_0597072_14473_15423 282
39 3300031238 Ga0265332_10000010 Ga0265332_10000010210 283
40 3300005456 Ga0070678_100233586 Ga0070678_1002335862 284
41 3300006195 Ga0075366_10000114 Ga0075366_1000011419 284
42 3300050493 nmdc:mga0k408_172_c1 nmdc:mga0k408_172_c1_17165_18127 284
43 3300039062 Ga0400483_280633 Ga0400483_280633_411_1367 285
44 3300045051 Ga0451576_0187444 Ga0451576_0187444_35_898 287
45 3300053178 Ga0500637_0060041 Ga0500637_0060041_1237_2139 287
46 3300003316 rootH1_10108050 rootH1_101080503 288
47 3300003322 rootL2_10005977 rootL2_100059776 288
48 3300021361 Ga0213872_10001765 Ga0213872_100017659 288
49 3300039447 Ga0436361_0183078 Ga0436361_0183078_7980_8939 288
50 3300042876 Ga0451577_0671380 Ga0451577_0671380_29_895 288
51 3300045051 Ga0451576_0365370 Ga0451576_0365370_624_1490 288
52 3300005364 Ga0070673_100087232 Ga0070673_1000872322 291
53 3300005842 Ga0068858_100102623 Ga0068858_1001026233 291
54 3300013296 Ga0157374_10000796 Ga0157374_1000079612 291
55 3300013297 Ga0157378_10101662 Ga0157378_101016621 291
56 3300026023 Ga0207677_10141256 Ga0207677_101412562 291
57 3300026041 Ga0207639_10186301 Ga0207639_101863012 291
58 3300038726 Ga0400490_28231 Ga0400490_28231_1661_2623 291
59 3300039062 Ga0400483_110847 Ga0400483_110847_456_1418 291
60 3300048905 Ga0496102_0117534 Ga0496102_0117534_393_1337 291
61 3300038726 Ga0400490_35440 Ga0400490_35440_6881_7855 296
62 3300039062 Ga0400483_014433 Ga0400483_014433_181_1284 296
63 3300039062 Ga0400483_159399 Ga0400483_159399_1215_2189 296
64 iso_pu_bacteria 2547132103 2547375648 299
65 iso_pu_bacteria 2843690924 2843691923 299
66 iso_pu_bacteria 2846033681 2846034593 299
67 iso_pu_bacteria 2846033681 2846035624 299
68 iso_pu_bacteria 2846037992 2846040463 299
69 iso_pu_bacteria 2998344455 2998346104 299
70 3300005338 Ga0068868_100038334 Ga0068868_1000383343 300
71 3300006358 Ga0068871_100102993 Ga0068871_1001029933 300
72 3300013296 Ga0157374_10338858 Ga0157374_103388582 300
73 3300013297 Ga0157378_10108477 Ga0157378_101084773 300
74 3300025899 Ga0207642_10165368 Ga0207642_101653682 300
75 3300025937 Ga0207669_10084268 Ga0207669_100842683 300
76 iso_pu_bacteria 2526164512 2526213825 300
77 iso_pu_bacteria 2547132512 2548848070 300
78 iso_pu_bacteria 2574179768 2574431892 301
79 iso_pu_bacteria 2891633521 2891635977 301
80 iso_pu_bacteria 639633007 639786599 301
81 3300006173 Ga0070716_100073166 Ga0070716_1000731662 303
82 3300025939 Ga0207665_10146496 Ga0207665_101464961 303
83 3300028666 Ga0265336_10000441 Ga0265336_1000044125 303
84 3300029957 Ga0265324_10000023 Ga0265324_1000002320 303
85 3300031238 Ga0265332_10001011 Ga0265332_100010118 303
86 3300031239 Ga0265328_10001156 Ga0265328_100011568 303
87 3300031240 Ga0265320_10019801 Ga0265320_100198012 303
88 3300031241 Ga0265325_10027352 Ga0265325_100273522 303
89 3300031242 Ga0265329_10006452 Ga0265329_100064523 303
90 3300031250 Ga0265331_10007645 Ga0265331_100076455 303
91 3300031344 Ga0265316_10041755 Ga0265316_100417552 303
92 3300031691 Ga0316579_10024684 Ga0316579_100246843 303
93 3300031691 Ga0316579_10028057 Ga0316579_100280572 303
94 3300031711 Ga0265314_10007370 Ga0265314_100073705 303
95 3300031711 Ga0265314_10012374 Ga0265314_100123746 303
96 3300031712 Ga0265342_10007465 Ga0265342_100074656 303
97 3300031733 Ga0316577_10026258 Ga0316577_100262582 303
98 3300036647 Ga0316582_0228108 Ga0316582_0228108_138_1106 303
99 3300042876 Ga0451577_0003496 Ga0451577_0003496_9947_10894 303
100 3300042876 Ga0451577_0356590 Ga0451577_0356590_350_1297 303
101 3300044673 Ga0453683_0021450 Ga0453683_0021450_331_1278 303
102 3300044712 Ga0453684_0000029 Ga0453684_0000029_76651_77595 303
103 3300044712 Ga0453684_0071234 Ga0453684_0071234_553_1500 303
104 3300044712 Ga0453684_0082939 Ga0453684_0082939_132_1076 303
105 3300045051 Ga0451576_0000813 Ga0451576_0000813_33377_34324 303
106 3300045051 Ga0451576_0005523 Ga0451576_0005523_4590_5537 303
107 3300045051 Ga0451576_0030313 Ga0451576_0030313_43_990 303
108 3300049592 Ga0501076_0026654 Ga0501076_0026654_1483_2469 303
109 3300005338 Ga0068868_100038334 Ga0068868_1000383342 304
110 3300005356 Ga0070674_100017828 Ga0070674_1000178282 304
111 3300005459 Ga0068867_100106911 Ga0068867_1001069112 304
112 3300005718 Ga0068866_10078437 Ga0068866_100784372 304
113 3300006844 Ga0075428_100182480 Ga0075428_1001824802 304
114 3300006847 Ga0075431_100337418 Ga0075431_1003374182 304
115 3300010375 Ga0105239_10142166 Ga0105239_101421663 304
116 3300026089 Ga0207648_10086187 Ga0207648_100861873 304
117 3300029957 Ga0265324_10006228 Ga0265324_100062283 304
118 3300031239 Ga0265328_10027393 Ga0265328_100273932 304
119 3300031250 Ga0265331_10041701 Ga0265331_100417012 304
120 3300031250 Ga0265331_10048704 Ga0265331_100487042 304
121 3300031251 Ga0265327_10014140 Ga0265327_100141404 304
122 3300031507 Ga0307509_10000031 Ga0307509_1000003199 304
123 3300031507 Ga0307509_10000407 Ga0307509_100004077 304
124 3300033529 Ga0316587_1010759 Ga0316587_10107591 304
125 3300033529 Ga0316587_1011595 Ga0316587_10115951 304
126 3300033529 Ga0316587_1020095 Ga0316587_10200951 304
127 3300033529 Ga0316587_1025584 Ga0316587_10255841 304
128 3300038725 Ga0400484_26082 Ga0400484_26082_7537_8508 304
129 3300038726 Ga0400490_21814 Ga0400490_21814_7943_8899 304
130 3300038726 Ga0400490_26671 Ga0400490_26671_15956_16912 304
131 3300038726 Ga0400490_28655 Ga0400490_28655_946_1914 304
132 3300038735 Ga0400485_01922 Ga0400485_01922_35948_36910 304
133 3300038735 Ga0400485_06748 Ga0400485_06748_748_1710 304
134 3300038735 Ga0400485_08947 Ga0400485_08947_10792_11757 304
135 3300038741 Ga0400488_15152 Ga0400488_15152_2173_3204 304
136 3300038741 Ga0400488_24343 Ga0400488_24343_1539_2501 304
137 3300038741 Ga0400488_43840 Ga0400488_43840_1909_2865 304
138 3300038741 Ga0400488_46825 Ga0400488_46825_12380_13342 304
139 3300038741 Ga0400488_52876 Ga0400488_52876_663_1631 304
140 3300038741 Ga0400488_59839 Ga0400488_59839_7237_8202 304
141 3300038742 Ga0400486_03140 Ga0400486_03140_5149_6114 304
142 3300038742 Ga0400486_14401 Ga0400486_14401_872_1840 304
143 3300038742 Ga0400486_23232 Ga0400486_23232_70282_71244 304
144 3300038742 Ga0400486_27500 Ga0400486_27500_754_1722 304
145 3300039062 Ga0400483_015065 Ga0400483_015065_13446_14417 304
146 3300039062 Ga0400483_088915 Ga0400483_088915_3384_4349 304
147 3300039062 Ga0400483_097462 Ga0400483_097462_7757_8725 304
148 3300039062 Ga0400483_101942 Ga0400483_101942_670_1632 304
149 3300039062 Ga0400483_119873 Ga0400483_119873_6836_7804 304
150 3300039062 Ga0400483_159993 Ga0400483_159993_4107_5075 304
151 3300039062 Ga0400483_193355 Ga0400483_193355_808_1839 304
152 3300039062 Ga0400483_259509 Ga0400483_259509_823_1788 304
153 3300039062 Ga0400483_278015 Ga0400483_278015_24231_25202 304
154 3300039062 Ga0400483_287117 Ga0400483_287117_293_1324 304
155 3300039093 Ga0400489_25470 Ga0400489_25470_2505_3467 304
156 3300039110 Ga0400487_12529 Ga0400487_12529_10027_10974 304
157 3300039110 Ga0400487_13769 Ga0400487_13769_2629_3594 304
158 3300039110 Ga0400487_14673 Ga0400487_14673_1823_2791 304
159 3300039110 Ga0400487_15184 Ga0400487_15184_1882_2844 304
160 3300039110 Ga0400487_21560 Ga0400487_21560_30228_31184 304
161 3300039110 Ga0400487_32651 Ga0400487_32651_11140_12111 304
162 3300039110 Ga0400487_46988 Ga0400487_46988_1870_2835 304
163 3300039110 Ga0400487_56197 Ga0400487_56197_9488_10450 304
164 3300039110 Ga0400487_65881 Ga0400487_65881_1070_2101 304
165 3300042876 Ga0451577_0000284 Ga0451577_0000284_90715_91695 304
166 3300044712 Ga0453684_0000102 Ga0453684_0000102_347658_348635 304
167 3300044712 Ga0453684_0000149 Ga0453684_0000149_282582_283562 304
168 3300044712 Ga0453684_0001320 Ga0453684_0001320_54001_54978 304
169 3300044712 Ga0453684_0192877 Ga0453684_0192877_166_1131 304
170 3300045051 Ga0451576_0000184 Ga0451576_0000184_6340_7317 304
171 3300045051 Ga0451576_0031653 Ga0451576_0031653_4606_5574 304
172 3300048909 Ga0496106_0134217 Ga0496106_0134217_825_1799 305
173 3300049656 Ga0501209_000068 Ga0501209_000068_1463_2440 305
174 iso_pu_bacteria 2547132103 2547375647 305
175 iso_pu_bacteria 2843690924 2843691922 305
176 iso_pu_bacteria 2846033681 2846035623 305
177 iso_pu_bacteria 2846037992 2846040464 306
178 iso_pu_bacteria 2998344455 2998346103 306
179 3300031239 Ga0265328_10027393 Ga0265328_100273931 307
180 3300031250 Ga0265331_10083119 Ga0265331_100831192 307
181 3300042876 Ga0451577_0003496 Ga0451577_0003496_8987_9934 307
182 3300044673 Ga0453683_0021450 Ga0453683_0021450_1292_2239 307
183 3300044712 Ga0453684_0071234 Ga0453684_0071234_1513_2460 307
184 3300044712 Ga0453684_0082939 Ga0453684_0082939_1090_2034 307
185 3300045051 Ga0451576_0000813 Ga0451576_0000813_34337_35284 307
186 3300045051 Ga0451576_0005523 Ga0451576_0005523_3630_4577 307
187 3300045051 Ga0451576_0030313 Ga0451576_0030313_1003_1950 307
188 3300045051 Ga0451576_0053682 Ga0451576_0053682_442_1389 307
189 3300021361 Ga0213872_10001765 Ga0213872_100017658 308
190 3300039447 Ga0436361_0183078 Ga0436361_0183078_7030_7956 308
191 3300053177 Ga0500636_0000053 Ga0500636_0000053_40439_41422 308
192 iso_pu_bacteria 2526164512 2526213824 308
193 iso_pu_bacteria 2547132512 2548848069 308
194 3300028577 Ga0265318_10002714 Ga0265318_100027142 309
195 3300031235 Ga0265330_10036306 Ga0265330_100363061 309
196 3300031238 Ga0265332_10001011 Ga0265332_100010117 309
197 3300031239 Ga0265328_10001156 Ga0265328_100011567 309
198 3300031240 Ga0265320_10019801 Ga0265320_100198013 309
199 3300031242 Ga0265329_10006452 Ga0265329_100064524 309
200 3300031249 Ga0265339_10073678 Ga0265339_100736782 309
201 3300031250 Ga0265331_10007645 Ga0265331_100076454 309
202 3300031344 Ga0265316_10087544 Ga0265316_100875443 309
203 3300031507 Ga0307509_10000031 Ga0307509_10000031100 309
204 3300031711 Ga0265314_10012374 Ga0265314_100123745 309
205 3300031712 Ga0265342_10007465 Ga0265342_100074655 309
206 3300005578 Ga0068854_100280753 Ga0068854_1002807532 310
207 3300009545 Ga0105237_10130770 Ga0105237_101307703 310
208 3300013296 Ga0157374_10158015 Ga0157374_101580152 310
209 3300013308 Ga0157375_10367997 Ga0157375_103679972 310
210 3300021361 Ga0213872_10003607 Ga0213872_100036078 310
211 3300021361 Ga0213872_10006523 Ga0213872_100065234 310
212 3300021361 Ga0213872_10006786 Ga0213872_100067864 310
213 3300021361 Ga0213872_10027143 Ga0213872_100271432 310
214 3300021361 Ga0213872_10037528 Ga0213872_100375282 310
215 3300025981 Ga0207640_10213240 Ga0207640_102132401 310
216 3300031239 Ga0265328_10001608 Ga0265328_100016084 310
217 3300031239 Ga0265328_10002027 Ga0265328_100020279 310
218 3300031250 Ga0265331_10000044 Ga0265331_10000044148 310
219 3300031250 Ga0265331_10000820 Ga0265331_1000082020 310
220 3300031250 Ga0265331_10002959 Ga0265331_1000295910 310
221 3300031251 Ga0265327_10000102 Ga0265327_1000010247 310
222 3300031251 Ga0265327_10010547 Ga0265327_100105475 310
223 3300031251 Ga0265327_10043663 Ga0265327_100436634 310
224 3300039447 Ga0436361_0085197 Ga0436361_0085197_5169_6101 310
225 3300039447 Ga0436361_0773457 Ga0436361_0773457_39503_40441 310
226 3300039447 Ga0436361_0926033 Ga0436361_0926033_4928_5860 310
227 3300039447 Ga0436361_1100774 Ga0436361_1100774_7549_8490 310
228 3300039447 Ga0436361_1118556 Ga0436361_1118556_3542_4483 310
229 3300044712 Ga0453684_0000917 Ga0453684_0000917_41451_42386 310
230 3300045051 Ga0451576_0226184 Ga0451576_0226184_884_1828 310
231 3300048905 Ga0496102_0117534 Ga0496102_0117534_1351_2310 310
232 3300053136 Ga0500559_0013772 Ga0500559_0013772_903_1886 310
233 3300003163 Ga0006759J45824_1092209 Ga0006759J45824_10922091 311
234 3300003316 rootH1_10108050 rootH1_101080502 311
235 3300003322 rootL2_10005977 rootL2_100059775 311
236 3300006195 Ga0075366_10000114 Ga0075366_1000011420 311
237 3300031238 Ga0265332_10000010 Ga0265332_10000010211 311
238 3300031238 Ga0265332_10002034 Ga0265332_100020342 311
239 3300031251 Ga0265327_10000065 Ga0265327_1000006597 311
240 3300031251 Ga0265327_10014140 Ga0265327_100141403 311
241 3300031507 Ga0307509_10000407 Ga0307509_100004078 311
242 3300031616 Ga0307508_10139506 Ga0307508_101395062 311
243 3300042876 Ga0451577_0107899 Ga0451577_0107899_497_1435 311
244 3300044712 Ga0453684_0000114 Ga0453684_0000114_104039_105013 311
245 3300044712 Ga0453684_0026272 Ga0453684_0026272_2757_3695 311
246 3300044712 Ga0453684_0079669 Ga0453684_0079669_51_1028 311
247 3300044712 Ga0453684_0192877 Ga0453684_0192877_1150_2088 311
248 3300045051 Ga0451576_0003776 Ga0451576_0003776_2988_3962 311
249 3300045051 Ga0451576_0031653 Ga0451576_0031653_3643_4581 311
250 3300045051 Ga0451576_0121268 Ga0451576_0121268_676_1614 311
251 3300045051 Ga0451576_0151385 Ga0451576_0151385_444_1421 311
252 3300045051 Ga0451576_0202616 Ga0451576_0202616_250_1188 311
253 3300045051 Ga0451576_0215988 Ga0451576_0215988_88_1065 311
254 3300045051 Ga0451576_0321973 Ga0451576_0321973_601_1539 311
255 3300048929 Ga0496126_0075902 Ga0496126_0075902_131_1093 311
256 3300049551 Ga0501335_006254 Ga0501335_006254_67_1011 311
257 3300049656 Ga0501209_000068 Ga0501209_000068_491_1453 311
258 3300049776 Ga0501280_001847 Ga0501280_001847_1005_1949 311
259 3300050493 nmdc:mga0k408_172_c1 nmdc:mga0k408_172_c1_16160_17107 311
260 3300053729 Ga0500625_019295 Ga0500625_019295_1681_2664 311

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00072

Response_reg

Response regulator receiver domain

221

345

0.9

PF01584

CheW

CheW-like domain

64

198

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
4jpb-assembly1.cif.gz_W the structure of a ternary complex between chea domains p4 and p5 with chew and with an unzipped fragment of tm14, a chemoreceptor analog from thermotoga maritima. 0.9173 23 162
4hnr-assembly1.cif.gz_A high resolution structure of chemotaxis response regulator chey4 of vibrio cholerae 0.9036 180 308
6rfv-assembly1.cif.gz_C revisiting ph-gated conformational switch. complex hk853-rr468 ph 7 0.8975 180 309
3dzd-assembly1.cif.gz_B crystal structure of sigma54 activator ntrc4 in the inactive state 0.8971 180 310
1ymv-assembly1.cif.gz_A signal transduction protein chey mutant with phe 14 replaced by gly, ser 15 replaced by gly, and met 17 replaced by gly 0.8917 181 310
ID Description Score Start End Superfamily
af_O49397_16_154_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9133 180 309 3.40.50.2300
af_K7LHH0_84_250_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9118 182 309 3.40.50.2300
af_P0DMC5_826_949_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9073 181 308 3.40.50.2300
4hnrA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9036 180 308 3.40.50.2300
af_Q1JSA0_6_124_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8973 181 308 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A6S6YCX8-F1-model_v4 Chemotaxis protein CheV-like 0.9345 1 309 GO:0000160
GO:0006935
AF-A0A0G4EGE5-F1-model_v4 non-specific serine/threonine protein kinase (EC 2.7.11.1) 0.9246 176 308 GO:0000160
GO:0004674
GO:0005524
AF-A0A6S6YCX8-F1-model_v4 Chemotaxis protein CheV-like 0.923 1 309 GO:0000160
GO:0006935
AF-A0A1F9MQS7-F1-model_v4 Two-component system response regulator 0.9228 178 310 GO:0000160
GO:0016787
AF-A0A7V4T7Q0-F1-model_v4 Response regulator 0.9218 178 309 GO:0000160

Feature Viewer

pLDDT pTM Quality
81.97 0.79 High
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Predicted Structure (AlphaFold2)

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