F369676

General Info

Members Datasets Scaffolds Average Seq Length
260 163 241 307

Family's Representative Sequence

Representative Sequence 3300032004|Ga0307414_10042400|Ga0307414_100424002
Length 358
Sequence MRSAWPGWRRGATCPSSIGQALITTPGRSFRLGSLLLLMRAPTLRTVWFGLALSLLAPLLAGSPPAAAVSLPVPASADDGSVLVLGRISDDPKAHYEQLKPLLDYVVPRMRDVGIKEGRILMARDAQQMTSYLRRGRVDWVTETAGTGMQLQKRAGARPLLLTERGGVSRYHSVFFVRKDSGIDSLADLQGRSIAFQSTASTSAYIVPAAALLDQGLSLEILLSPMDRPTPDSVGYVFARSELNIAAWVHKRLVDAGVFSSLDWEDARRMPPAFRQDMKAIYQTPDYPRALEMVRGNLDPKVEARLREVLLQAADDPDAREAMTLFFRTTRFMSVDPVSQQGLDRLRDGIGRVREQVE

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2643221559 Lysobacter sp. Root559 Isolate Unclassified
3 2643221579 Pseudoxanthomonas sp. Root630 Isolate Unclassified
4 2643221581 Pseudoxanthomonas sp. Root65 Isolate Unclassified
5 2643221586 Lysobacter sp. Root667 Isolate Unclassified
6 2643221593 Lysobacter sp. Root690 Isolate Unclassified
7 2643221612 Lysobacter sp. Root76 Isolate Unclassified
8 2643221695 Lysobacter sp. Root494 Isolate Unclassified
9 2643221727 Lysobacter sp. Root96 Isolate Unclassified
10 2894414249 Luteimonas sp. LNNU 24178 Isolate Rhizosphere
11 2919513703 Luteimonas sp. 3794 Isolate Unclassified
12 2919675420 Luteimonas terrae 4099 Isolate Unclassified
13 2923516293 Pseudoxanthomonas mexicana SLBN-89 Isolate Rhizosphere
14 2929195423 Xanthomonas sp. R-73098 Hybrid assembly Isolate Unclassified
15 2939589442 Stenotrophomonas rhizophila 716 Isolate Rhizosphere
16 2974307012 Stenotrophomonas sp. SORGH_AS_0282 Isolate Unclassified
17 2977247770 Stenotrophomonas rhizophila SORGH_AS 457 Isolate Unclassified
18 2984514374 Stenotrophomonas sp. SORGH_AS282 Isolate Aerial Root
19 2987605356 Stenotrophomonas sp. ATCM1_4 Isolate Unclassified
20 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
21 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
22 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
23 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
24 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
25 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
26 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
27 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
28 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
29 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
30 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
31 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
32 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
33 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
34 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
37 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
38 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
39 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
40 3300009979 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_126 metaG Metagenome Rhizosphere
41 3300012512 Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.old.270510 Metagenome Rhizosphere
42 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
43 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
44 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
45 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
46 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
47 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
48 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
49 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
50 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
51 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
52 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
54 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
55 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
56 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
58 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
65 3300027471 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes) (version 2) Metagenome Rhizosphere
66 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
67 3300027552 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes) (version 2) Metagenome Rhizosphere
68 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
69 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
70 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
71 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
72 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
73 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
74 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
75 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
76 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
77 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
78 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
79 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
80 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
81 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
82 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
83 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
84 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
85 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
86 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
87 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
88 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
89 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
90 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
91 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
92 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
93 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
94 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
95 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
96 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
97 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
98 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
99 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
100 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
101 3300042128 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0117W_E14_070716_123 Metagenome Rhizosphere
102 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
103 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
104 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
105 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
106 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
107 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
108 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
109 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
110 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
111 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
112 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
113 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
114 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
115 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
116 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
117 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
118 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
119 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
120 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
121 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
122 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
123 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
124 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
125 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
126 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
127 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
128 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
129 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
130 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
131 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
132 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
133 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
134 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
135 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
136 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
137 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
147 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
148 3300049660 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_B_0_control Metagenome Rhizosphere
149 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
150 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
151 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
152 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
153 3300049762 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E11_A_4_control Metagenome Rhizosphere
154 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
155 3300049772 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E11_B_4_control Metagenome Rhizosphere
156 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
158 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
159 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
160 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
161 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
162 3300053734 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 endosphere Metagenome Endosphere
163 8002869464 Pseudoxanthomonas helianthi 110414 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 92.69
Metatranscriptomes 0
Isolates 7.31

Biome Distribution

Category Percentage (%)
Aerial Root 0.38
Bulb 0
Endosphere 22.31
Nodule 0
Rhizoplane 6.15
Rhizosphere 50
Stem 0
Stem Tuber 0
Unclassified 21.15

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1723949 2162886007 Bacteria 3803
2 JGI25151J46595_10020341 3300003187 Bacteria 2800
3 Ga0055526_1000008 3300003771 Bacteria 300059
4 Ga0055526_1019739 3300003771 Bacteria 2440
5 Ga0055537_1000107 3300003773 Bacteria 62592
6 Ga0055537_1000231 3300003773 Bacteria 40770
7 Ga0055524_1000087 3300003775 Bacteria 116388
8 Ga0055524_1010477 3300003775 Bacteria 3687
9 Ga0055536_1001935 3300003781 Bacteria 11953
10 Ga0055534_1000003 3300003784 Bacteria 300063
11 Ga0055534_1000026 3300003784 Bacteria 130908
12 Ga0055528_1000004 3300003790 Bacteria 285772
13 Ga0055528_1002443 3300003790 Bacteria 9949
14 Ga0055530_10012623 3300003791 Bacteria 2932
15 Ga0055531_10047665 3300003794 Bacteria 1163
16 Ga0065714_10010579 3300005288 Bacteria 2681
17 Ga0065704_10070640 3300005289 Bacteria 18572
18 Ga0065704_10072343 3300005289 Bacteria 8706
19 Ga0070670_100010794 3300005331 Bacteria 7802
20 Ga0070668_100004646 3300005347 Bacteria 10173
21 Ga0070669_100020531 3300005353 Bacteria 4718
22 Ga0070664_100045472 3300005564 Bacteria 3707
23 Ga0068864_100069955 3300005618 Bacteria 3053
24 Ga0068863_100148029 3300005841 Bacteria 2246
25 Ga0068862_100036938 3300005844 Bacteria 4140
26 Ga0075364_10009835 3300006051 Bacteria 5753
27 Ga0075364_10074846 3300006051 Bacteria 2233
28 Ga0105251_10000597 3300009011 Bacteria 33077
29 Ga0105032_100338 3300009979 Bacteria 4811
30 Ga0157327_1001795 3300012512 Bacteria 1398
31 Ga0157373_10097708 3300013100 Bacteria 2067
32 Ga0157373_10382960 3300013100 Bacteria 1006
33 Ga0157371_10025969 3300013102 Bacteria 4262
34 Ga0157370_10009136 3300013104 Bacteria 10629
35 Ga0182008_10000958 3300014497 Bacteria 20100
36 Ga0182008_10012026 3300014497 Bacteria 4582
37 Ga0182008_10078493 3300014497 Bacteria 1624
38 Ga0163161_10010369 3300017792 Bacteria 6452
39 Ga0207425_1012374 3300025245 Bacteria 2005
40 Ga0209565_1000001 3300025263 Bacteria 2950419
41 Ga0209565_1000022 3300025263 Bacteria 390888
42 Ga0209673_1000001 3300025273 Bacteria 3176258
43 Ga0209673_1000110 3300025273 Bacteria 181173
44 Ga0209130_1021984 3300025284 Bacteria 1430
45 Ga0209675_1000001 3300025291 Bacteria 2950293
46 Ga0209675_1000060 3300025291 Bacteria 184316
47 Ga0209675_1009296 3300025291 Bacteria 3488
48 Ga0209675_1010078 3300025291 Bacteria 3264
49 Ga0209676_1000027 3300025292 Bacteria 560222
50 Ga0209676_1000219 3300025292 Bacteria 125330
51 Ga0209676_1000299 3300025292 Bacteria 100419
52 Ga0209676_1003678 3300025292 Bacteria 9188
53 Ga0209676_1005662 3300025292 Bacteria 6430
54 Ga0209676_1013411 3300025292 Bacteria 3153
55 Ga0209025_1000015 3300025294 Bacteria 808120
56 Ga0209025_1002538 3300025294 Bacteria 19066
57 Ga0209025_1007684 3300025294 Bacteria 7961
58 Ga0209025_1037205 3300025294 Bacteria 2163
59 Ga0209564_1000001 3300025295 Bacteria 3176258
60 Ga0209564_1000541 3300025295 Bacteria 61140
61 Ga0209564_1008741 3300025295 Bacteria 4939
62 Ga0209758_1018876 3300025297 Bacteria 3355
63 Ga0209050_1000850 3300025298 Bacteria 41582
64 Ga0209050_1000974 3300025298 Bacteria 36653
65 Ga0209050_1026686 3300025298 Bacteria 1925
66 Ga0209256_1000002 3300025299 Bacteria 1906740
67 Ga0209256_1002852 3300025299 Bacteria 13174
68 Ga0209256_1012904 3300025299 Bacteria 3146
69 Ga0209051_1002029 3300025303 Bacteria 15417
70 Ga0209051_1019594 3300025303 Bacteria 2945
71 Ga0209257_1000133 3300025304 Bacteria 208808
72 Ga0209257_1000325 3300025304 Bacteria 99936
73 Ga0209257_1000839 3300025304 Bacteria 44159
74 Ga0209257_1008563 3300025304 Bacteria 5768
75 Ga0209257_1013276 3300025304 Bacteria 3688
76 Ga0207713_1001379 3300025735 Bacteria 19712
77 Ga0207650_10008467 3300025925 Bacteria 7022
78 Ga0207679_10041328 3300025945 Bacteria 3306
79 Ga0207641_10043497 3300026088 Bacteria 3773
80 Ga0209371_1000016 3300027312 Bacteria 646301
81 Ga0209995_1000641 3300027471 Bacteria 5403
82 Ga0209999_1000100 3300027543 Bacteria 10325
83 Ga0209982_1008801 3300027552 Bacteria 1485
84 Ga0209983_1000300 3300027665 Bacteria 10288
85 Ga0209971_1000909 3300027682 Bacteria 7613
86 Ga0209974_10002626 3300027876 Bacteria 6521
87 Ga0209974_10011635 3300027876 Bacteria 2953
88 Ga0268256_1000015 3300030500 Bacteria 646300
89 Ga0316176_1112762 3300030732 Bacteria 2454
90 Ga0316183_1027521 3300030742 Bacteria 8277
91 Ga0307513_10002570 3300031456 Bacteria 25077
92 Ga0307513_10206612 3300031456 Bacteria 1799
93 Ga0307413_10032724 3300031824 Bacteria 2951
94 Ga0307410_10050674 3300031852 Bacteria 2793
95 Ga0307410_10257242 3300031852 Bacteria 1360
96 Ga0307407_10069487 3300031903 Bacteria 2091
97 Ga0307407_10183503 3300031903 Bacteria 1388
98 Ga0307416_100242905 3300032002 Bacteria 1746
99 Ga0307414_10038880 3300032004 Bacteria 3199
100 Ga0307414_10042400 3300032004 Bacteria 3091
101 Ga0307414_10043878 3300032004 Bacteria 3049
102 Ga0307414_10099145 3300032004 Bacteria 2188
103 Ga0307414_10127160 3300032004 Bacteria 1971
104 Ga0307414_10243893 3300032004 Bacteria 1489
105 Ga0307414_10252251 3300032004 Bacteria 1467
106 Ga0307411_10049562 3300032005 Bacteria 2730
107 Ga0395900_0254430 3300037418 Bacteria 1756
108 Ga0395905_0002807 3300037471 Bacteria 19089
109 Ga0395905_0048225 3300037471 Bacteria 3992
110 Ga0395905_0063418 3300037471 Bacteria 3457
111 Ga0395905_0197698 3300037471 Bacteria 1885
112 Ga0395901_0425282 3300038443 Bacteria 1361
113 Ga0439436_0002811 3300041404 Bacteria 5273
114 Ga0439436_0013613 3300041404 Bacteria 2459
115 Ga0439439_0002510 3300041406 Bacteria 3912
116 Ga0439447_001149 3300041407 Bacteria 9645
117 Ga0439465_0002695 3300041413 Bacteria 5807
118 Ga0439465_0004812 3300041413 Bacteria 4339
119 Ga0439465_0008294 3300041413 Bacteria 3278
120 Ga0451791_0913040 3300041451 Bacteria 2058
121 Ga0451793_1559875 3300041452 Bacteria 1973
122 Ga0451793_1621297 3300041452 Bacteria 2357
123 Ga0451797_0167862 3300041453 Bacteria 2183
124 Ga0451797_0798866 3300041453 Bacteria 2660
125 Ga0451797_0859034 3300041453 Bacteria 1387
126 Ga0451807_0819233 3300041486 Bacteria 2437
127 Ga0451833_0367140 3300041491 Bacteria 1556
128 Ga0451837_0134831 3300041494 Bacteria 1615
129 Ga0451837_0563014 3300041494 Bacteria 4678
130 Ga0451837_0775445 3300041494 Bacteria 1608
131 Ga0451841_0116158 3300041498 Bacteria 1323
132 Ga0451843_0553472 3300041509 Bacteria 2412
133 Ga0451843_0802530 3300041509 Bacteria 1545
134 Ga0439433_0012049 3300041999 Bacteria 1895
135 Ga0439445_0000574 3300042004 Bacteria 7522
136 Ga0439445_0035739 3300042004 Bacteria 1305
137 Ga0439445_0061048 3300042004 Bacteria 1031
138 Ga0439432_004247 3300042006 Bacteria 5239
139 Ga0439432_020298 3300042006 Bacteria 2210
140 Ga0439449_0000046 3300042007 Bacteria 37723
141 Ga0439449_0002898 3300042007 Bacteria 6672
142 Ga0439449_0003165 3300042007 Bacteria 6410
143 Ga0439449_0064268 3300042007 Bacteria 1354
144 Ga0439462_0036101 3300042015 Bacteria 1315
145 Ga0450897_000778 3300042128 Bacteria 1929
146 Ga0451577_0011566 3300042876 Bacteria 8342
147 Ga0495638_0007673 3300046460 Bacteria 7711
148 Ga0495638_0060909 3300046460 Bacteria 2333
149 Ga0495610_0005253 3300046512 Bacteria 9264
150 Ga0495610_0077717 3300046512 Bacteria 1532
151 Ga0495616_0027978 3300046513 Bacteria 2988
152 Ga0495631_0013470 3300046518 Bacteria 3968
153 Ga0495643_0001545 3300046522 Bacteria 20567
154 Ga0495663_0002935 3300046525 Bacteria 5018
155 Ga0495663_0060609 3300046525 Bacteria 1189
156 Ga0495609_0084706 3300046538 Bacteria 1383
157 Ga0495621_0000575 3300046539 Bacteria 9160
158 Ga0495656_0031293 3300046615 Bacteria 2157
159 Ga0495668_0002897 3300046616 Bacteria 13541
160 Ga0495668_0015539 3300046616 Bacteria 4442
161 Ga0495625_0046301 3300046660 Bacteria 3139
162 Ga0495660_0014632 3300046810 Bacteria 4537
163 Ga0495636_0022232 3300047318 Bacteria 2563
164 Ga0495636_0054421 3300047318 Bacteria 1681
165 Ga0495672_0000527 3300047320 Bacteria 43714
166 Ga0496100_0238882 3300048903 Bacteria 1340
167 Ga0496103_0075835 3300048906 Bacteria 2110
168 Ga0496107_0174797 3300048910 Bacteria 1594
169 Ga0496108_0087798 3300048911 Bacteria 2641
170 Ga0496109_0024279 3300048912 Bacteria 5388
171 Ga0496109_0070780 3300048912 Bacteria 3201
172 Ga0496110_0206971 3300048913 Bacteria 1783
173 Ga0496111_0066764 3300048914 Bacteria 2612
174 Ga0496112_0208927 3300048915 Bacteria 1910
175 Ga0496116_0065423 3300048919 Bacteria 2332
176 Ga0496117_0002167 3300048920 Bacteria 25580
177 Ga0496117_0020806 3300048920 Bacteria 5338
178 Ga0496117_0043522 3300048920 Bacteria 3263
179 Ga0496117_0045530 3300048920 Bacteria 3167
180 Ga0496118_0023739 3300048921 Bacteria 5314
181 Ga0496118_0027817 3300048921 Bacteria 4775
182 Ga0496118_0048861 3300048921 Bacteria 3263
183 Ga0496119_0012825 3300048922 Bacteria 6758
184 Ga0496120_0003775 3300048923 Bacteria 13382
185 Ga0496121_0024116 3300048924 Bacteria 5829
186 Ga0496122_0000468 3300048925 Bacteria 84377
187 Ga0496122_0006433 3300048925 Bacteria 13488
188 Ga0496122_0011058 3300048925 Bacteria 9210
189 Ga0496122_0015613 3300048925 Bacteria 7245
190 Ga0496122_0052432 3300048925 Bacteria 3087
191 Ga0496123_0000456 3300048926 Bacteria 71960
192 Ga0496123_0002471 3300048926 Bacteria 22837
193 Ga0496123_0005646 3300048926 Bacteria 12489
194 Ga0496123_0028914 3300048926 Bacteria 4092
195 Ga0496123_0059399 3300048926 Bacteria 2472
196 Ga0496124_0001606 3300048927 Bacteria 32474
197 Ga0496124_0002156 3300048927 Bacteria 26424
198 Ga0496124_0024970 3300048927 Bacteria 5420
199 Ga0496124_0064676 3300048927 Bacteria 3052
200 Ga0496124_0076146 3300048927 Bacteria 2770
201 Ga0496124_0097098 3300048927 Bacteria 2393
202 Ga0496125_0013464 3300048928 Bacteria 8037
203 Ga0496126_0062344 3300048929 Bacteria 3346
204 Ga0496126_0158810 3300048929 Bacteria 1933
205 Ga0496126_0175126 3300048929 Bacteria 1825
206 Ga0501290_001384 3300049513 Bacteria 3348
207 Ga0501031_0001761 3300049568 Bacteria 13584
208 Ga0501031_0200957 3300049568 Bacteria 1300
209 Ga0501032_0011399 3300049569 Bacteria 6387
210 Ga0501034_0000272 3300049571 Bacteria 93316
211 Ga0501034_0002957 3300049571 Bacteria 19690
212 Ga0501034_0004412 3300049571 Bacteria 15660
213 Ga0501034_0015815 3300049571 Bacteria 7749
214 Ga0501036_0004073 3300049572 Bacteria 11758
215 Ga0501037_0003382 3300049573 Bacteria 11595
216 Ga0501038_0005619 3300049574 Bacteria 11638
217 Ga0501038_0132107 3300049574 Bacteria 2048
218 Ga0501039_0008543 3300049575 Bacteria 7807
219 Ga0501043_0004649 3300049579 Bacteria 11128
220 Ga0501047_0012416 3300049581 Bacteria 8063
221 Ga0501070_0006489 3300049586 Bacteria 9956
222 Ga0501070_0197912 3300049586 Bacteria 1650
223 Ga0501073_0004962 3300049589 Bacteria 9982
224 Ga0501216_009183 3300049660 Bacteria 1573
225 Ga0501235_014506 3300049669 Bacteria 1737
226 Ga0501225_0002720 3300049705 Bacteria 5427
227 Ga0501225_0029134 3300049705 Bacteria 1517
228 Ga0501079_0459172 3300049741 Bacteria 1000
229 Ga0501080_0005000 3300049742 Bacteria 11807
230 Ga0501080_0109781 3300049742 Bacteria 2557
231 Ga0501265_001454 3300049762 Bacteria 2680
232 Ga0501269_007095 3300049766 Bacteria 1352
233 Ga0501275_000023 3300049772 Bacteria 17435
234 Ga0501035_0007324 3300049822 Bacteria 10318
235 Ga0501044_0004512 3300049823 Bacteria 15566
236 Ga0501044_0463615 3300049823 Bacteria 1172
237 nmdc:mga00v17_16503_c1 3300050491 Bacteria 4161
238 nmdc:mga0yw44_41528_c1 3300050492 Bacteria 2738
239 nmdc:mga04h51_25727_c1 3300050495 Bacteria 1814
240 Ga0500568_0002355 3300053139 Bacteria 11190
241 Ga0500565_000423 3300053734 Bacteria 2267

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300003771 Ga0055526_1000008 Ga0055526_1000008203 281
2 3300003773 Ga0055537_1000107 Ga0055537_10001077 281
3 3300003775 Ga0055524_1000087 Ga0055524_100008764 281
4 3300003784 Ga0055534_1000003 Ga0055534_100000349 281
5 3300003790 Ga0055528_1000004 Ga0055528_100000499 281
6 3300025263 Ga0209565_1000001 Ga0209565_10000011400 281
7 3300025273 Ga0209673_1000001 Ga0209673_10000011400 281
8 3300025291 Ga0209675_1000001 Ga0209675_10000011133 281
9 3300025295 Ga0209564_1000001 Ga0209564_10000011295 281
10 3300025299 Ga0209256_1000002 Ga0209256_1000002258 281
11 3300041451 Ga0451791_0913040 Ga0451791_0913040_849_1790 282
12 3300041452 Ga0451793_1621297 Ga0451793_1621297_973_1914 282
13 3300041486 Ga0451807_0819233 Ga0451807_0819233_920_1861 282
14 3300041491 Ga0451833_0367140 Ga0451833_0367140_365_1306 282
15 3300041494 Ga0451837_0775445 Ga0451837_0775445_534_1475 282
16 3300041509 Ga0451843_0553472 Ga0451843_0553472_39_932 282
17 3300041509 Ga0451843_0802530 Ga0451843_0802530_342_1283 282
18 3300041453 Ga0451797_0798866 Ga0451797_0798866_1292_2230 283
19 3300031456 Ga0307513_10002570 Ga0307513_1000257019 285
20 3300031824 Ga0307413_10032724 Ga0307413_100327242 285
21 3300042876 Ga0451577_0011566 Ga0451577_0011566_4752_5705 285
22 3300046512 Ga0495610_0005253 Ga0495610_0005253_3759_4688 285
23 3300046518 Ga0495631_0013470 Ga0495631_0013470_1055_1984 285
24 3300005347 Ga0070668_100004646 Ga0070668_1000046468 286
25 3300009979 Ga0105032_100338 Ga0105032_1003383 286
26 3300025294 Ga0209025_1007684 Ga0209025_10076846 286
27 3300025304 Ga0209257_1000325 Ga0209257_10003256 286
28 3300041404 Ga0439436_0002811 Ga0439436_0002811_1569_2465 286
29 3300041406 Ga0439439_0002510 Ga0439439_0002510_1230_2126 286
30 3300041999 Ga0439433_0012049 Ga0439433_0012049_748_1644 286
31 3300042004 Ga0439445_0035739 Ga0439445_0035739_301_1197 286
32 3300042007 Ga0439449_0064268 Ga0439449_0064268_428_1324 286
33 3300049669 Ga0501235_014506 Ga0501235_014506_390_1253 286
34 iso_pu_bacteria 2643221559 2643816272 286
35 iso_pu_bacteria 2643221586 2643939043 286
36 iso_pu_bacteria 2643221612 2644077216 286
37 iso_pu_bacteria 2643221727 2644694557 286
38 iso_pu_bacteria 2987605356 2987606203 286
39 3300031456 Ga0307513_10206612 Ga0307513_102066122 287
40 3300041404 Ga0439436_0013613 Ga0439436_0013613_525_1433 288
41 3300041413 Ga0439465_0002695 Ga0439465_0002695_2637_3545 288
42 3300041413 Ga0439465_0004812 Ga0439465_0004812_3367_4308 288
43 3300042004 Ga0439445_0000574 Ga0439445_0000574_4383_5291 288
44 3300042007 Ga0439449_0000046 Ga0439449_0000046_30216_31124 288
45 3300046525 Ga0495663_0002935 Ga0495663_0002935_473_1414 288
46 3300049705 Ga0501225_0002720 Ga0501225_0002720_3464_4372 288
47 3300003781 Ga0055536_1001935 Ga0055536_10019351 289
48 3300025292 Ga0209676_1000027 Ga0209676_100002736 289
49 3300041453 Ga0451797_0167862 Ga0451797_0167862_978_1907 289
50 3300048927 Ga0496124_0097098 Ga0496124_0097098_816_1760 289
51 iso_pu_bacteria 2643221695 2644528672 289
52 3300032004 Ga0307414_10099145 Ga0307414_100991452 290
53 3300041494 Ga0451837_0134831 Ga0451837_0134831_260_1138 290
54 iso_pu_bacteria 2643221593 2643977648 290
55 3300005289 Ga0065704_10070640 Ga0065704_1007064012 291
56 3300031852 Ga0307410_10257242 Ga0307410_102572421 291
57 3300031903 Ga0307407_10069487 Ga0307407_100694872 291
58 3300032004 Ga0307414_10243893 Ga0307414_102438931 291
59 3300053139 Ga0500568_0002355 Ga0500568_0002355_8326_9243 291
60 iso_pu_bacteria 2643221579 2643905607 291
61 iso_pu_bacteria 2643221581 2643913261 291
62 iso_pu_bacteria 2894414249 2894416151 291
63 iso_pu_bacteria 2923516293 2923517715 291
64 3300042015 Ga0439462_0036101 Ga0439462_0036101_204_1130 292
65 3300048925 Ga0496122_0000468 Ga0496122_0000468_4970_5857 292
66 3300048926 Ga0496123_0000456 Ga0496123_0000456_60721_61608 292
67 3300049571 Ga0501034_0000272 Ga0501034_0000272_49168_50097 292
68 3300050491 nmdc:mga00v17_16503_c1 nmdc:mga00v17_16503_c1_1398_2297 292
69 3300005288 Ga0065714_10010579 Ga0065714_100105792 293
70 3300013100 Ga0157373_10382960 Ga0157373_103829601 293
71 3300013104 Ga0157370_10009136 Ga0157370_100091369 293
72 3300014497 Ga0182008_10000958 Ga0182008_100009586 293
73 3300017792 Ga0163161_10010369 Ga0163161_100103693 293
74 3300027876 Ga0209974_10011635 Ga0209974_100116352 293
75 3300030732 Ga0316176_1112762 Ga0316176_11127622 293
76 3300032004 Ga0307414_10038880 Ga0307414_100388803 293
77 3300032004 Ga0307414_10042400 Ga0307414_100424002 293
78 3300041407 Ga0439447_001149 Ga0439447_001149_3273_4205 293
79 3300041452 Ga0451793_1559875 Ga0451793_1559875_251_1201 293
80 3300041498 Ga0451841_0116158 Ga0451841_0116158_92_1021 293
81 3300042006 Ga0439432_004247 Ga0439432_004247_70_1002 293
82 3300042007 Ga0439449_0003165 Ga0439449_0003165_3602_4543 293
83 3300046460 Ga0495638_0007673 Ga0495638_0007673_1524_2453 293
84 3300046460 Ga0495638_0060909 Ga0495638_0060909_1341_2279 293
85 3300046512 Ga0495610_0077717 Ga0495610_0077717_412_1341 293
86 3300046538 Ga0495609_0084706 Ga0495609_0084706_222_1151 293
87 3300046616 Ga0495668_0002897 Ga0495668_0002897_5550_6482 293
88 3300048913 Ga0496110_0206971 Ga0496110_0206971_451_1380 293
89 3300048920 Ga0496117_0020806 Ga0496117_0020806_3352_4281 293
90 3300048920 Ga0496117_0043522 Ga0496117_0043522_1061_1984 293
91 3300048921 Ga0496118_0023739 Ga0496118_0023739_3328_4257 293
92 3300048921 Ga0496118_0048861 Ga0496118_0048861_1280_2203 293
93 3300048924 Ga0496121_0024116 Ga0496121_0024116_3634_4563 293
94 3300048925 Ga0496122_0015613 Ga0496122_0015613_730_1659 293
95 3300048925 Ga0496122_0052432 Ga0496122_0052432_1429_2358 293
96 3300048926 Ga0496123_0059399 Ga0496123_0059399_814_1743 293
97 3300048927 Ga0496124_0024970 Ga0496124_0024970_2039_2968 293
98 3300048927 Ga0496124_0064676 Ga0496124_0064676_849_1772 293
99 3300048928 Ga0496125_0013464 Ga0496125_0013464_3248_4177 293
100 3300048929 Ga0496126_0175126 Ga0496126_0175126_670_1599 293
101 3300049660 Ga0501216_009183 Ga0501216_009183_169_1101 293
102 3300049705 Ga0501225_0029134 Ga0501225_0029134_48_980 293
103 3300049766 Ga0501269_007095 Ga0501269_007095_146_1078 293
104 3300050492 nmdc:mga0yw44_41528_c1 nmdc:mga0yw44_41528_c1_393_1322 293
105 3300053734 Ga0500565_000423 Ga0500565_000423_974_1903 293
106 iso_pu_bacteria 2919675420 2919678323 293
107 3300003187 JGI25151J46595_10020341 JGI25151J46595_100203412 294
108 3300003771 Ga0055526_1019739 Ga0055526_10197392 294
109 3300003794 Ga0055531_10047665 Ga0055531_100476651 294
110 3300005353 Ga0070669_100020531 Ga0070669_1000205312 294
111 3300005618 Ga0068864_100069955 Ga0068864_1000699553 294
112 3300005841 Ga0068863_100148029 Ga0068863_1001480292 294
113 3300005844 Ga0068862_100036938 Ga0068862_1000369382 294
114 3300006051 Ga0075364_10009835 Ga0075364_100098352 294
115 3300006051 Ga0075364_10074846 Ga0075364_100748462 294
116 3300012512 Ga0157327_1001795 Ga0157327_10017952 294
117 3300013102 Ga0157371_10025969 Ga0157371_100259694 294
118 3300014497 Ga0182008_10078493 Ga0182008_100784932 294
119 3300025245 Ga0207425_1012374 Ga0207425_10123742 294
120 3300025284 Ga0209130_1021984 Ga0209130_10219842 294
121 3300025291 Ga0209675_1009296 Ga0209675_10092962 294
122 3300025291 Ga0209675_1010078 Ga0209675_10100782 294
123 3300025292 Ga0209676_1000299 Ga0209676_10002996 294
124 3300025292 Ga0209676_1003678 Ga0209676_10036785 294
125 3300025292 Ga0209676_1005662 Ga0209676_10056624 294
126 3300025292 Ga0209676_1013411 Ga0209676_10134112 294
127 3300025294 Ga0209025_1000015 Ga0209025_100001523 294
128 3300025294 Ga0209025_1002538 Ga0209025_100253814 294
129 3300025294 Ga0209025_1037205 Ga0209025_10372052 294
130 3300025295 Ga0209564_1008741 Ga0209564_10087414 294
131 3300025297 Ga0209758_1018876 Ga0209758_10188762 294
132 3300025298 Ga0209050_1000974 Ga0209050_100097410 294
133 3300025299 Ga0209256_1002852 Ga0209256_10028526 294
134 3300025303 Ga0209051_1019594 Ga0209051_10195943 294
135 3300025304 Ga0209257_1000133 Ga0209257_1000133199 294
136 3300025304 Ga0209257_1008563 Ga0209257_10085633 294
137 3300026088 Ga0207641_10043497 Ga0207641_100434972 294
138 3300027471 Ga0209995_1000641 Ga0209995_10006414 294
139 3300027543 Ga0209999_1000100 Ga0209999_10001009 294
140 3300027552 Ga0209982_1008801 Ga0209982_10088012 294
141 3300027665 Ga0209983_1000300 Ga0209983_10003005 294
142 3300027682 Ga0209971_1000909 Ga0209971_10009095 294
143 3300027876 Ga0209974_10002626 Ga0209974_100026265 294
144 3300031852 Ga0307410_10050674 Ga0307410_100506742 294
145 3300031903 Ga0307407_10183503 Ga0307407_101835032 294
146 3300032002 Ga0307416_100242905 Ga0307416_1002429052 294
147 3300032004 Ga0307414_10043878 Ga0307414_100438782 294
148 3300032004 Ga0307414_10127160 Ga0307414_101271602 294
149 3300032004 Ga0307414_10252251 Ga0307414_102522512 294
150 3300032005 Ga0307411_10049562 Ga0307411_100495622 294
151 3300037471 Ga0395905_0197698 Ga0395905_0197698_419_1324 294
152 3300041413 Ga0439465_0008294 Ga0439465_0008294_1963_2973 294
153 3300042004 Ga0439445_0061048 Ga0439445_0061048_65_994 294
154 3300042007 Ga0439449_0002898 Ga0439449_0002898_3510_4520 294
155 3300042128 Ga0450897_000778 Ga0450897_000778_750_1679 294
156 3300046513 Ga0495616_0027978 Ga0495616_0027978_450_1379 294
157 3300046525 Ga0495663_0060609 Ga0495663_0060609_45_995 294
158 3300046539 Ga0495621_0000575 Ga0495621_0000575_2276_3214 294
159 3300046615 Ga0495656_0031293 Ga0495656_0031293_479_1411 294
160 3300046616 Ga0495668_0015539 Ga0495668_0015539_1255_2205 294
161 3300047318 Ga0495636_0022232 Ga0495636_0022232_1572_2522 294
162 3300048903 Ga0496100_0238882 Ga0496100_0238882_286_1218 294
163 3300048906 Ga0496103_0075835 Ga0496103_0075835_665_1597 294
164 3300048910 Ga0496107_0174797 Ga0496107_0174797_366_1298 294
165 3300048911 Ga0496108_0087798 Ga0496108_0087798_1662_2594 294
166 3300048912 Ga0496109_0070780 Ga0496109_0070780_431_1363 294
167 3300048914 Ga0496111_0066764 Ga0496111_0066764_971_1903 294
168 3300048915 Ga0496112_0208927 Ga0496112_0208927_918_1850 294
169 3300048925 Ga0496122_0011058 Ga0496122_0011058_3399_4313 294
170 3300048926 Ga0496123_0005646 Ga0496123_0005646_4540_5454 294
171 3300048929 Ga0496126_0158810 Ga0496126_0158810_510_1424 294
172 3300049513 Ga0501290_001384 Ga0501290_001384_857_1792 294
173 3300049568 Ga0501031_0200957 Ga0501031_0200957_174_1172 294
174 3300049571 Ga0501034_0002957 Ga0501034_0002957_8363_9295 294
175 3300049574 Ga0501038_0132107 Ga0501038_0132107_826_1824 294
176 3300049586 Ga0501070_0197912 Ga0501070_0197912_88_1086 294
177 3300049742 Ga0501080_0109781 Ga0501080_0109781_1319_2317 294
178 3300049762 Ga0501265_001454 Ga0501265_001454_1051_1986 294
179 3300049772 Ga0501275_000023 Ga0501275_000023_12381_13316 294
180 iso_pu_bacteria 2919513703 2919515308 294
181 iso_pu_bacteria 8002869464 8002872720 294
182 3300003773 Ga0055537_1000231 Ga0055537_10002313 295
183 3300003775 Ga0055524_1010477 Ga0055524_10104772 295
184 3300003784 Ga0055534_1000026 Ga0055534_10000263 295
185 3300003790 Ga0055528_1002443 Ga0055528_10024433 295
186 3300003791 Ga0055530_10012623 Ga0055530_100126231 295
187 3300005564 Ga0070664_100045472 Ga0070664_1000454722 295
188 3300013100 Ga0157373_10097708 Ga0157373_100977082 295
189 3300014497 Ga0182008_10012026 Ga0182008_100120263 295
190 3300025263 Ga0209565_1000022 Ga0209565_1000022200 295
191 3300025273 Ga0209673_1000110 Ga0209673_100011056 295
192 3300025291 Ga0209675_1000060 Ga0209675_1000060158 295
193 3300025292 Ga0209676_1000219 Ga0209676_100021982 295
194 3300025295 Ga0209564_1000541 Ga0209564_10005418 295
195 3300025298 Ga0209050_1000850 Ga0209050_100085041 295
196 3300025298 Ga0209050_1026686 Ga0209050_10266863 295
197 3300025299 Ga0209256_1012904 Ga0209256_10129042 295
198 3300025303 Ga0209051_1002029 Ga0209051_10020292 295
199 3300025304 Ga0209257_1000839 Ga0209257_10008393 295
200 3300025304 Ga0209257_1013276 Ga0209257_10132764 295
201 3300025945 Ga0207679_10041328 Ga0207679_100413283 295
202 3300030742 Ga0316183_1027521 Ga0316183_10275215 295
203 3300037418 Ga0395900_0254430 Ga0395900_0254430_273_1199 295
204 3300037471 Ga0395905_0002807 Ga0395905_0002807_13276_14202 295
205 3300037471 Ga0395905_0048225 Ga0395905_0048225_1087_2013 295
206 3300037471 Ga0395905_0063418 Ga0395905_0063418_2491_3417 295
207 3300038443 Ga0395901_0425282 Ga0395901_0425282_35_961 295
208 3300041494 Ga0451837_0563014 Ga0451837_0563014_590_1516 295
209 3300042006 Ga0439432_020298 Ga0439432_020298_1208_2167 295
210 3300046522 Ga0495643_0001545 Ga0495643_0001545_16807_17766 295
211 3300046660 Ga0495625_0046301 Ga0495625_0046301_854_1813 295
212 3300046810 Ga0495660_0014632 Ga0495660_0014632_1166_2110 295
213 3300047318 Ga0495636_0054421 Ga0495636_0054421_220_1197 295
214 3300047320 Ga0495672_0000527 Ga0495672_0000527_4602_5561 295
215 3300048919 Ga0496116_0065423 Ga0496116_0065423_828_1787 295
216 3300048920 Ga0496117_0045530 Ga0496117_0045530_936_1895 295
217 3300048921 Ga0496118_0027817 Ga0496118_0027817_2030_2989 295
218 3300048926 Ga0496123_0028914 Ga0496123_0028914_885_1844 295
219 3300048927 Ga0496124_0002156 Ga0496124_0002156_9756_10700 295
220 3300048927 Ga0496124_0076146 Ga0496124_0076146_854_1813 295
221 3300048929 Ga0496126_0062344 Ga0496126_0062344_1387_2346 295
222 3300049568 Ga0501031_0001761 Ga0501031_0001761_7381_8298 295
223 3300049569 Ga0501032_0011399 Ga0501032_0011399_480_1397 295
224 3300049571 Ga0501034_0004412 Ga0501034_0004412_12562_13476 295
225 3300049571 Ga0501034_0015815 Ga0501034_0015815_1331_2248 295
226 3300049572 Ga0501036_0004073 Ga0501036_0004073_5098_6015 295
227 3300049573 Ga0501037_0003382 Ga0501037_0003382_6423_7340 295
228 3300049574 Ga0501038_0005619 Ga0501038_0005619_5057_5974 295
229 3300049575 Ga0501039_0008543 Ga0501039_0008543_1824_2741 295
230 3300049579 Ga0501043_0004649 Ga0501043_0004649_4877_5794 295
231 3300049581 Ga0501047_0012416 Ga0501047_0012416_5405_6322 295
232 3300049586 Ga0501070_0006489 Ga0501070_0006489_3578_4495 295
233 3300049589 Ga0501073_0004962 Ga0501073_0004962_1302_2219 295
234 3300049741 Ga0501079_0459172 Ga0501079_0459172_46_963 295
235 3300049742 Ga0501080_0005000 Ga0501080_0005000_5781_6698 295
236 3300049822 Ga0501035_0007324 Ga0501035_0007324_9117_10034 295
237 3300049823 Ga0501044_0004512 Ga0501044_0004512_6329_7246 295
238 3300049823 Ga0501044_0463615 Ga0501044_0463615_92_1006 295
239 3300050495 nmdc:mga04h51_25727_c1 nmdc:mga04h51_25727_c1_22_981 295
240 iso_pu_bacteria 2939589442 2939591006 295
241 iso_pu_bacteria 2974307012 2974308320 295
242 iso_pu_bacteria 2977247770 2977249078 295
243 iso_pu_bacteria 2984514374 2984516470 295
244 2162886007 SwRhRL2b_contig_1723949 SwRhRL2b_0930.00004660 296
245 3300005289 Ga0065704_10072343 Ga0065704_100723432 296
246 3300005331 Ga0070670_100010794 Ga0070670_1000107944 296
247 3300009011 Ga0105251_10000597 Ga0105251_1000059719 296
248 3300025735 Ga0207713_1001379 Ga0207713_100137919 296
249 3300025925 Ga0207650_10008467 Ga0207650_100084674 296
250 3300027312 Ga0209371_1000016 Ga0209371_1000016273 296
251 3300030500 Ga0268256_1000015 Ga0268256_1000015297 296
252 3300041453 Ga0451797_0859034 Ga0451797_0859034_159_1049 296
253 3300048912 Ga0496109_0024279 Ga0496109_0024279_308_1240 296
254 3300048920 Ga0496117_0002167 Ga0496117_0002167_4010_4900 296
255 3300048922 Ga0496119_0012825 Ga0496119_0012825_2206_3096 296
256 3300048923 Ga0496120_0003775 Ga0496120_0003775_5634_6524 296
257 3300048925 Ga0496122_0006433 Ga0496122_0006433_5616_6506 296
258 3300048926 Ga0496123_0002471 Ga0496123_0002471_16336_17226 296
259 3300048927 Ga0496124_0001606 Ga0496124_0001606_27778_28668 296
260 iso_pu_bacteria 2929195423 2929198249 296

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12974

Phosphonate-bd

ABC transporter, phosphonate, periplasmic substrate-binding protein

86

339

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
5ub7-assembly2.cif.gz_B xac2383 from xanthomonas citri bound to atp 0.9443 19 296
5ub3-assembly2.cif.gz_B xac2383 from xanthomonas citri bound to chloride ion 0.9438 20 296
5ub7-assembly2.cif.gz_B xac2383 from xanthomonas citri bound to atp 0.9378 19 296
5ub3-assembly2.cif.gz_B xac2383 from xanthomonas citri bound to chloride ion 0.9341 20 296
6ghq-assembly1.cif.gz_A htxb d206n protein variant from pseudomonas stutzeri in a partially open conformation to 1.53 a resolution 0.8171 20 294
ID Description Score Start End Superfamily
af_Q2G1L7_145_252_3.40.190.10 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.8274 109 223 3.40.190.10
af_Q2G1L7_145_252_3.40.190.10 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.7994 109 223 3.40.190.10
3uifA02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.7967 110 222 3.40.190.10
2xxqA01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.7885 108 222 3.40.190.10
2v25B02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.7779 106 224 3.40.190.10
ID Description Score Start End GO Terms
AF-A0A507ZWT0-F1-model_v4 PhnD/SsuA/transferrin family substrate-binding protein 0.9739 11 296
AF-A0A090SKE2-F1-model_v4 deleted 0.9623 79 293
AF-A0A4U5JRG2-F1-model_v4 Phosphate/phosphite/phosphonate ABC transporter substrate-binding protein 0.9613 12 296
AF-A0A1Q9G714-F1-model_v4 Alkylphosphonate ABC transporter 0.961 11 294
AF-A0A7Y0QWK7-F1-model_v4 Phosphate/phosphite/phosphonate ABC transporter substrate-binding protein 0.9579 9 288

Feature Viewer

pLDDT pTM Quality
93.92 0.87 High
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Predicted Structure (AlphaFold2)

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