F368842

General Info

Members Datasets Scaffolds Average Seq Length
259 170 230 349

Family's Representative Sequence

Representative Sequence 3300021361|Ga0213872_10049721|Ga0213872_100497211
Length 372
Sequence VTTRSGIPRSDASGSAVEALSNSLVISVDAMGGDQGPPVVVPGVALAVERLGGRDVRILLHGDRAKIEPELARCPALARISEIRHTEQRIAGDEKPAQALRRGKGSSLWNAVEAVKTGQAQAAVSGGNTGALMAISKLLLRMAAPGLERPAIVASWPTLRGVTAVLDVGANISSDAEQLLEFAIMGVAFHRAVHGSTRPTVGILNVGSEEMKGHEEVREAHARLRAFQDLPFEYHGFVEGDDIAKGTVDVVVTDGFTGNVALKTAEGVARFIGTVFKDGLTSSLQAKLGAAIAYPALKSIKARIDPSSVNGGPLLGLNGIVVKSHGGADAKGFANAMKVAVDLAASRHAAEIADNLARFGALAEKAEAEAGV

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2510917020 Caulobacter sp. AP07 Isolate Rhizosphere
3 2510917021 Novosphingobium sp. AP12 Isolate Rhizosphere
4 2582581279 Caulobacter henricii OK261 Isolate Rhizosphere
5 2582581280 Caulobacter henricii CF287 Isolate Rhizosphere
6 2582581293 Caulobacter henricii YR570 Isolate Rhizosphere
7 2585428106 Caulobacter sp. OV484 Isolate Rhizosphere
8 2643221545 Caulobacter sp. Root1455 Isolate Unclassified
9 2643221552 Caulobacter sp. Root1472 Isolate Unclassified
10 2643221574 Brevundimonas sp. Root608 Isolate Unclassified
11 2643221583 Caulobacter sp. Root655 Isolate Unclassified
12 2643221584 Caulobacter sp. Root656 Isolate Unclassified
13 2643221640 Caulobacter sp. Root342 Isolate Unclassified
14 2643221642 Caulobacter sp. Root343 Isolate Unclassified
15 2643221663 Brevundimonas sp. Root1279 Isolate Unclassified
16 2643221691 Caulobacter sp. Root487D2Y Isolate Unclassified
17 2643221699 Brevundimonas sp. Root1423 Isolate Unclassified
18 2791355048 Caulobacter flavus CGMCC1 15093 Isolate Rhizosphere
19 2818991435 Caulobacter henricii 536 Isolate Unclassified
20 2818991454 Caulobacter rhizosphaerae 3260 Isolate Rhizosphere
21 2843744320 Caulobacter flavus RHGG3 Isolate Unclassified
22 2849560528 Caulobacter zeae 410 Isolate Unclassified
23 2849573788 Caulobacter endophyticus 774 Isolate Unclassified
24 2851153111 Caulobacter radicis 736 Isolate Unclassified
25 2857504554 Caulobacter sp. R-72291 Isolate Unclassified
26 2884960567 Caulobacter sp. 602-1 Isolate Rhizosphere
27 2898329390 Caulobacter sp. 602-2 Isolate Rhizosphere
28 2928531327 Caulobacter sp. 1776 Isolate Rhizosphere
29 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
30 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
31 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
32 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
33 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
34 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
35 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
36 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
37 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
38 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
39 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
40 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
41 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
42 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
43 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
44 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
45 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
46 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
47 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
48 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
49 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
50 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
51 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
52 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
53 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
54 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
55 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
56 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
57 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
58 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
59 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
60 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
62 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
63 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
65 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
79 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
80 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
81 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
82 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
83 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
84 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
85 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
86 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
87 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
88 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
89 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
90 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
91 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
92 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
93 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
94 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
95 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
96 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
97 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
98 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
99 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
100 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
101 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
102 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
103 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
104 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
105 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
106 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
107 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
108 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
109 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
110 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
111 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
112 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
113 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
114 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
115 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
116 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
117 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
118 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
119 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
120 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
121 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
122 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
123 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
124 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
125 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
126 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
127 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
128 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
129 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
130 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
131 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
132 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
133 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
134 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
135 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
136 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
137 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
138 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
139 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
140 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
141 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
142 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
147 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
148 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
149 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
150 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
151 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
152 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
153 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
154 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
155 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
156 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
157 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
158 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
159 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
160 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
161 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
162 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
163 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
164 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
165 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
166 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
167 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
168 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
169 3300053731 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere Metagenome Endosphere
170 8054302542 Novosphingobium kaempferiae Sx8-5 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 88.8
Metatranscriptomes 0
Isolates 11.2

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 26.25
Nodule 0
Rhizoplane 2.7
Rhizosphere 54.83
Stem 0
Stem Tuber 0
Unclassified 16.22

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1688787 2162886007 Bacteria 29014
2 rootL2_10087546 3300003322 Bacteria 1667
3 rootL2_10087547 3300003322 Bacteria 2352
4 Ga0055537_1002479 3300003773 Bacteria 6170
5 Ga0055524_1002709 3300003775 Bacteria 8941
6 Ga0055524_1019916 3300003775 Bacteria 2277
7 Ga0055536_1001549 3300003781 Bacteria 13785
8 Ga0055536_1009298 3300003781 Bacteria 4083
9 Ga0055536_1009530 3300003781 Bacteria 4001
10 Ga0055530_10007470 3300003791 Bacteria 4589
11 Ga0055530_10008720 3300003791 Bacteria 4012
12 Ga0055531_10005910 3300003794 Bacteria 7049
13 Ga0055531_10006931 3300003794 Bacteria 6309
14 Ga0055531_10012097 3300003794 Bacteria 4088
15 Ga0065165_1000911 3300005262 Bacteria 38161
16 Ga0065704_10000190 3300005289 Bacteria 213919
17 Ga0065704_10076002 3300005289 Bacteria 5310
18 Ga0070658_10153312 3300005327 Bacteria 1930
19 Ga0068869_100109864 3300005334 Bacteria 2096
20 Ga0070660_100166975 3300005339 Bacteria 1776
21 Ga0070669_100004389 3300005353 Bacteria 10177
22 Ga0070671_100012712 3300005355 Bacteria 6786
23 Ga0070659_100095036 3300005366 Bacteria 2394
24 Ga0070667_100000198 3300005367 Bacteria 71378
25 Ga0070667_100008730 3300005367 Bacteria 8400
26 Ga0070667_100155298 3300005367 Bacteria 2012
27 Ga0068853_100339687 3300005539 Bacteria 1395
28 Ga0070665_100000107 3300005548 Bacteria 156048
29 Ga0068863_100002972 3300005841 Bacteria 16767
30 Ga0068858_100438754 3300005842 Bacteria 1257
31 Ga0068862_100008274 3300005844 Bacteria 8605
32 Ga0068862_100017546 3300005844 Bacteria 5961
33 Ga0068862_100047794 3300005844 Bacteria 3653
34 Ga0075370_10038950 3300006353 Bacteria 2677
35 Ga0105251_10000540 3300009011 Bacteria 35672
36 Ga0105240_10005226 3300009093 Bacteria 19415
37 Ga0105247_10030037 3300009101 Bacteria 3294
38 Ga0105248_10021548 3300009177 Bacteria 7138
39 Ga0157373_10002645 3300013100 Bacteria 13586
40 Ga0157373_10016224 3300013100 Bacteria 5436
41 Ga0163161_10069716 3300017792 Bacteria 2570
42 Ga0213872_10049721 3300021361 Bacteria 1904
43 Ga0213876_10000186 3300021384 Bacteria 64451
44 Ga0213876_10033897 3300021384 Bacteria 2692
45 Ga0209565_1000392 3300025263 Bacteria 36920
46 Ga0209673_1003063 3300025273 Bacteria 10299
47 Ga0209676_1000031 3300025292 Bacteria 478976
48 Ga0209676_1000061 3300025292 Bacteria 332674
49 Ga0209676_1000391 3300025292 Bacteria 80028
50 Ga0209564_1000667 3300025295 Bacteria 50734
51 Ga0209758_1014136 3300025297 Bacteria 4275
52 Ga0209758_1016208 3300025297 Bacteria 3799
53 Ga0209050_1003429 3300025298 Bacteria 11699
54 Ga0209050_1008919 3300025298 Bacteria 5240
55 Ga0209050_1009526 3300025298 Bacteria 4951
56 Ga0209256_1001640 3300025299 Bacteria 21785
57 Ga0209051_1002678 3300025303 Bacteria 12445
58 Ga0209257_1000264 3300025304 Bacteria 120518
59 Ga0209257_1000439 3300025304 Bacteria 79332
60 Ga0209257_1003564 3300025304 Bacteria 13207
61 Ga0209257_1019694 3300025304 Bacteria 2528
62 Ga0207713_1004470 3300025735 Bacteria 9056
63 Ga0207681_10001134 3300025923 Bacteria 17207
64 Ga0207644_10000736 3300025931 Bacteria 20767
65 Ga0207644_10084085 3300025931 Bacteria 2358
66 Ga0207711_10009542 3300025941 Bacteria 8095
67 Ga0207668_10034035 3300025972 Bacteria 3380
68 Ga0207658_10004078 3300025986 Bacteria 10197
69 Ga0207658_10065049 3300025986 Bacteria 2737
70 Ga0207639_10015508 3300026041 Bacteria 5378
71 Ga0207641_10067325 3300026088 Bacteria 3067
72 Ga0268266_10001429 3300028379 Bacteria 28467
73 Ga0268265_10001880 3300028380 Bacteria 16702
74 Ga0268265_10017095 3300028380 Bacteria 4998
75 Ga0268265_10052396 3300028380 Bacteria 3086
76 Ga0268265_10120579 3300028380 Bacteria 2160
77 Ga0268264_10011097 3300028381 Bacteria 7442
78 Ga0265337_1009069 3300028556 Bacteria 3572
79 Ga0265326_10041921 3300028558 Bacteria 1299
80 Ga0307515_10036965 3300028794 Bacteria 7874
81 Ga0307515_10085080 3300028794 Bacteria 4052
82 Ga0307515_10109356 3300028794 Bacteria 3247
83 Ga0265338_10001753 3300028800 Bacteria 34268
84 Ga0265338_10017143 3300028800 Bacteria 7825
85 Ga0265324_10011993 3300029957 Bacteria 3285
86 Ga0265320_10060900 3300031240 Bacteria 1801
87 Ga0265327_10000166 3300031251 Bacteria 141539
88 Ga0265327_10000758 3300031251 Bacteria 50091
89 Ga0265327_10001144 3300031251 Bacteria 36241
90 Ga0265327_10070038 3300031251 Bacteria 1758
91 Ga0307513_10048175 3300031456 Bacteria 4627
92 Ga0307508_10012224 3300031616 Bacteria 7850
93 Ga0265314_10035851 3300031711 Bacteria 3612
94 Ga0307406_10001331 3300031901 Bacteria 13870
95 Ga0307412_10049944 3300031911 Bacteria 2758
96 Ga0307414_10017284 3300032004 Bacteria 4409
97 Ga0307414_10047990 3300032004 Bacteria 2942
98 Ga0307414_10148149 3300032004 Bacteria 1847
99 Ga0373937_0183389 3300036401 Bacteria 1966
100 Ga0395899_0000013 3300037312 Bacteria 510397
101 Ga0395901_0169754 3300038443 Bacteria 2289
102 Ga0436365_1470129 3300039437 Bacteria 6758
103 Ga0436365_1884511 3300039437 Bacteria 98004
104 Ga0436361_0447879 3300039447 Bacteria 8137
105 Ga0451807_2117202 3300041486 Bacteria 1622
106 Ga0439446_0018312 3300042156 Bacteria 1961
107 Ga0495627_000360 3300046453 Bacteria 42630
108 Ga0495627_000905 3300046453 Bacteria 20645
109 Ga0495638_0005733 3300046460 Bacteria 9151
110 Ga0495638_0006242 3300046460 Bacteria 8699
111 Ga0495638_0007553 3300046460 Bacteria 7776
112 Ga0495638_0090978 3300046460 Bacteria 1838
113 Ga0495650_0000020 3300046471 Bacteria 533839
114 Ga0495650_0001649 3300046471 Bacteria 20636
115 Ga0495596_0000730 3300046500 Bacteria 20234
116 Ga0495607_0003515 3300046501 Bacteria 11972
117 Ga0495583_0000069 3300046506 Bacteria 186863
118 Ga0495606_0005980 3300046507 Bacteria 11405
119 Ga0495610_0000018 3300046512 Bacteria 355044
120 Ga0495610_0001891 3300046512 Bacteria 18089
121 Ga0495610_0002172 3300046512 Bacteria 16661
122 Ga0495610_0004295 3300046512 Bacteria 10590
123 Ga0495610_0009219 3300046512 Bacteria 6262
124 Ga0495610_0093987 3300046512 Bacteria 1354
125 Ga0495616_0000623 3300046513 Bacteria 26569
126 Ga0495620_0022457 3300046515 Bacteria 3037
127 Ga0495620_0056728 3300046515 Bacteria 1646
128 Ga0495632_0001484 3300046519 Bacteria 19465
129 Ga0495632_0012451 3300046519 Bacteria 4906
130 Ga0495637_0008023 3300046520 Bacteria 5198
131 Ga0495637_0016161 3300046520 Bacteria 3491
132 Ga0495643_0000199 3300046522 Bacteria 93741
133 Ga0495643_0023854 3300046522 Bacteria 3473
134 Ga0495643_0044526 3300046522 Bacteria 2411
135 Ga0495643_0084333 3300046522 Bacteria 1649
136 Ga0495648_0000098 3300046524 Bacteria 109074
137 Ga0495654_0000109 3300046530 Bacteria 93356
138 Ga0495633_0024436 3300046558 Bacteria 2987
139 Ga0495668_0000039 3300046616 Bacteria 231402
140 Ga0495668_0005992 3300046616 Bacteria 8072
141 Ga0495668_0008528 3300046616 Bacteria 6383
142 Ga0495625_0000271 3300046660 Bacteria 80817
143 Ga0495625_0007138 3300046660 Bacteria 9810
144 Ga0495625_0035743 3300046660 Bacteria 3659
145 Ga0495625_0042644 3300046660 Bacteria 3295
146 Ga0495625_0052884 3300046660 Bacteria 2906
147 Ga0495625_0077224 3300046660 Bacteria 2327
148 Ga0495625_0124421 3300046660 Bacteria 1751
149 Ga0495613_0047710 3300046689 Bacteria 3163
150 Ga0495670_0096143 3300046691 Bacteria 1520
151 Ga0495589_0005263 3300046794 Bacteria 6838
152 Ga0495660_0005778 3300046810 Bacteria 7390
153 Ga0495674_0334842 3300047319 Bacteria 1231
154 Ga0495672_0001344 3300047320 Bacteria 24402
155 Ga0495672_0003993 3300047320 Bacteria 12341
156 Ga0495673_0000189 3300047469 Bacteria 99018
157 Ga0495673_0000296 3300047469 Bacteria 66691
158 Ga0495673_0002175 3300047469 Bacteria 14249
159 Ga0495681_0000020 3300047470 Bacteria 170007
160 Ga0495686_0001394 3300047472 Bacteria 26804
161 Ga0495686_0047999 3300047472 Bacteria 2694
162 Ga0495686_0110779 3300047472 Bacteria 1646
163 Ga0495615_0000074 3300048090 Bacteria 30813
164 Ga0496103_0009196 3300048906 Bacteria 5853
165 Ga0496104_0035044 3300048907 Bacteria 4684
166 Ga0496105_0005799 3300048908 Bacteria 9418
167 Ga0496106_0018427 3300048909 Bacteria 5161
168 Ga0496107_0000019 3300048910 Bacteria 150224
169 Ga0496115_0283153 3300048918 Bacteria 1361
170 Ga0496116_0036099 3300048919 Bacteria 3464
171 Ga0496117_0002537 3300048920 Bacteria 22802
172 Ga0496118_0030423 3300048921 Bacteria 4505
173 Ga0496121_0015784 3300048924 Bacteria 7866
174 Ga0496121_0056999 3300048924 Bacteria 3241
175 Ga0496121_0256066 3300048924 Bacteria 1211
176 Ga0496122_0004735 3300048925 Bacteria 16687
177 Ga0496123_0001822 3300048926 Bacteria 28023
178 Ga0496124_0052945 3300048927 Bacteria 3445
179 Ga0496124_0274687 3300048927 Bacteria 1232
180 Ga0496125_0057427 3300048928 Bacteria 3151
181 Ga0496125_0081488 3300048928 Bacteria 2472
182 Ga0496126_0005629 3300048929 Bacteria 14247
183 Ga0496126_0061068 3300048929 Bacteria 3387
184 Ga0495678_008928 3300049459 Bacteria 5013
185 Ga0501033_0005419 3300049570 Bacteria 10114
186 Ga0501033_0110498 3300049570 Bacteria 2001
187 Ga0501034_0015147 3300049571 Bacteria 7925
188 Ga0501037_0024877 3300049573 Bacteria 4426
189 Ga0501047_0144881 3300049581 Bacteria 2253
190 Ga0501238_007512 3300049671 Bacteria 1418
191 Ga0501044_0001836 3300049823 Bacteria 24727
192 Ga0501044_0172864 3300049823 Bacteria 2130
193 Ga0500578_0000035 3300053086 Bacteria 136406
194 Ga0500643_001838 3300053087 Bacteria 11602
195 Ga0500643_005094 3300053087 Bacteria 5743
196 Ga0500643_022153 3300053087 Bacteria 2050
197 Ga0500644_0000958 3300053088 Bacteria 9065
198 Ga0500644_0002537 3300053088 Bacteria 4562
199 Ga0500647_0029378 3300053091 Bacteria 2607
200 Ga0500641_0000413 3300053096 Bacteria 15841
201 Ga0500641_0019074 3300053096 Bacteria 2589
202 Ga0500554_001921 3300053102 Bacteria 4023
203 Ga0500556_0000111 3300053104 Bacteria 72589
204 Ga0500594_0000350 3300053118 Bacteria 10317
205 Ga0500595_006690 3300053119 Bacteria 4865
206 Ga0500608_000162 3300053122 Bacteria 27771
207 Ga0500608_038553 3300053122 Bacteria 2286
208 Ga0500618_000186 3300053125 Bacteria 51092
209 Ga0500559_0000040 3300053136 Bacteria 106740
210 Ga0500559_0000300 3300053136 Bacteria 37885
211 Ga0500559_0000324 3300053136 Bacteria 36134
212 Ga0500559_0002750 3300053136 Bacteria 8924
213 Ga0500559_0009247 3300053136 Bacteria 4277
214 Ga0500559_0016372 3300053136 Bacteria 3129
215 Ga0500564_000082 3300053138 Bacteria 24718
216 Ga0500573_0035994 3300053140 Bacteria 2858
217 Ga0500577_0007421 3300053142 Bacteria 3073
218 Ga0500616_0024512 3300053153 Bacteria 3351
219 Ga0500616_0030048 3300053153 Bacteria 2986
220 Ga0500622_0000180 3300053156 Bacteria 68052
221 Ga0500622_0003459 3300053156 Bacteria 10533
222 Ga0500622_0007963 3300053156 Bacteria 5964
223 Ga0500622_0008413 3300053156 Bacteria 5774
224 Ga0500622_0025945 3300053156 Bacteria 3094
225 Ga0500636_0020394 3300053177 Bacteria 3925
226 Ga0500637_0002914 3300053178 Bacteria 7736
227 Ga0500611_003362 3300053727 Bacteria 2040
228 Ga0500645_000457 3300053730 Bacteria 28069
229 Ga0500645_003443 3300053730 Bacteria 6419
230 Ga0500609_000422 3300053731 Bacteria 6271

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300031911 Ga0307412_10049944 Ga0307412_100499442 267
2 3300031901 Ga0307406_10001331 Ga0307406_100013315 268
3 3300047319 Ga0495674_0334842 Ga0495674_0334842_290_1210 280
4 3300046660 Ga0495625_0124421 Ga0495625_0124421_32_1021 294
5 iso_pu_bacteria 2643221663 2644351983 308
6 3300005366 Ga0070659_100095036 Ga0070659_1000950362 311
7 3300005539 Ga0068853_100339687 Ga0068853_1003396872 311
8 3300026041 Ga0207639_10015508 Ga0207639_100155085 311
9 3300031251 Ga0265327_10001144 Ga0265327_1000114422 311
10 3300031456 Ga0307513_10048175 Ga0307513_100481756 311
11 3300047472 Ga0495686_0047999 Ga0495686_0047999_1256_2338 312
12 3300049570 Ga0501033_0005419 Ga0501033_0005419_4913_5938 312
13 3300049571 Ga0501034_0015147 Ga0501034_0015147_2111_3136 312
14 3300049573 Ga0501037_0024877 Ga0501037_0024877_1312_2337 312
15 3300049823 Ga0501044_0001836 Ga0501044_0001836_20243_21268 312
16 3300003781 Ga0055536_1001549 Ga0055536_10015495 313
17 3300003794 Ga0055531_10006931 Ga0055531_100069315 313
18 3300025292 Ga0209676_1000061 Ga0209676_100006193 313
19 3300025298 Ga0209050_1009526 Ga0209050_10095262 313
20 3300025304 Ga0209257_1000439 Ga0209257_100043965 313
21 3300028558 Ga0265326_10041921 Ga0265326_100419212 313
22 3300032004 Ga0307414_10047990 Ga0307414_100479902 313
23 3300032004 Ga0307414_10148149 Ga0307414_101481492 313
24 3300053088 Ga0500644_0000958 Ga0500644_0000958_5024_6070 313
25 3300003781 Ga0055536_1009298 Ga0055536_10092983 314
26 3300003781 Ga0055536_1009530 Ga0055536_10095303 314
27 3300003791 Ga0055530_10007470 Ga0055530_100074704 314
28 3300003791 Ga0055530_10008720 Ga0055530_100087203 314
29 3300003794 Ga0055531_10012097 Ga0055531_100120973 314
30 3300006353 Ga0075370_10038950 Ga0075370_100389504 314
31 3300025292 Ga0209676_1000031 Ga0209676_100003132 314
32 3300025292 Ga0209676_1000391 Ga0209676_100039161 314
33 3300025298 Ga0209050_1003429 Ga0209050_10034293 314
34 3300025298 Ga0209050_1008919 Ga0209050_10089197 314
35 3300025303 Ga0209051_1002678 Ga0209051_10026786 314
36 3300025304 Ga0209257_1003564 Ga0209257_100356412 314
37 3300025304 Ga0209257_1019694 Ga0209257_10196942 314
38 3300028794 Ga0307515_10085080 Ga0307515_100850805 314
39 3300028794 Ga0307515_10109356 Ga0307515_101093562 314
40 3300046522 Ga0495643_0084333 Ga0495643_0084333_377_1426 314
41 3300046616 Ga0495668_0000039 Ga0495668_0000039_26706_27737 314
42 3300047472 Ga0495686_0110779 Ga0495686_0110779_394_1443 314
43 3300048918 Ga0496115_0283153 Ga0496115_0283153_119_1150 314
44 3300048924 Ga0496121_0256066 Ga0496121_0256066_35_1066 314
45 3300048927 Ga0496124_0052945 Ga0496124_0052945_1692_2729 314
46 3300048927 Ga0496124_0274687 Ga0496124_0274687_140_1177 314
47 3300048928 Ga0496125_0081488 Ga0496125_0081488_909_1946 314
48 3300048929 Ga0496126_0005629 Ga0496126_0005629_5426_6463 314
49 3300053122 Ga0500608_000162 Ga0500608_000162_26664_27695 314
50 3300053136 Ga0500559_0016372 Ga0500559_0016372_2051_3082 314
51 3300053156 Ga0500622_0003459 Ga0500622_0003459_6612_7661 314
52 3300053156 Ga0500622_0007963 Ga0500622_0007963_4650_5681 314
53 iso_pu_bacteria 2510917020 2511122164 314
54 iso_pu_bacteria 2582581280 2585155099 314
55 iso_pu_bacteria 2582581293 2585199073 314
56 iso_pu_bacteria 2643221545 2643750680 314
57 iso_pu_bacteria 2643221552 2643782044 314
58 iso_pu_bacteria 2643221583 2643926261 314
59 iso_pu_bacteria 2643221584 2643927874 314
60 iso_pu_bacteria 2643221691 2644509754 314
61 iso_pu_bacteria 2818991435 2819535935 314
62 iso_pu_bacteria 2818991454 2819646167 314
63 3300032004 Ga0307414_10017284 Ga0307414_100172843 315
64 3300046520 Ga0495637_0016161 Ga0495637_0016161_732_1859 315
65 3300053140 Ga0500573_0035994 Ga0500573_0035994_543_1607 315
66 3300038443 Ga0395901_0169754 Ga0395901_0169754_863_1909 317
67 iso_pu_bacteria 2643221574 2643883121 317
68 iso_pu_bacteria 2643221699 2644547822 317
69 3300003322 rootL2_10087546 rootL2_100875462 318
70 3300003322 rootL2_10087547 rootL2_100875473 318
71 3300003773 Ga0055537_1002479 Ga0055537_10024791 318
72 3300003775 Ga0055524_1002709 Ga0055524_10027099 318
73 3300003775 Ga0055524_1019916 Ga0055524_10199162 318
74 3300003794 Ga0055531_10005910 Ga0055531_100059102 318
75 3300005262 Ga0065165_1000911 Ga0065165_100091120 318
76 3300025263 Ga0209565_1000392 Ga0209565_100039229 318
77 3300025273 Ga0209673_1003063 Ga0209673_10030636 318
78 3300025295 Ga0209564_1000667 Ga0209564_100066754 318
79 3300025297 Ga0209758_1014136 Ga0209758_10141364 318
80 3300025297 Ga0209758_1016208 Ga0209758_10162083 318
81 3300025299 Ga0209256_1001640 Ga0209256_100164018 318
82 3300025304 Ga0209257_1000264 Ga0209257_100026432 318
83 3300028794 Ga0307515_10036965 Ga0307515_100369654 318
84 3300046453 Ga0495627_000360 Ga0495627_000360_40078_41133 318
85 3300046460 Ga0495638_0005733 Ga0495638_0005733_7633_8688 318
86 3300046460 Ga0495638_0006242 Ga0495638_0006242_5942_7000 318
87 3300046460 Ga0495638_0007553 Ga0495638_0007553_6566_7636 318
88 3300046460 Ga0495638_0090978 Ga0495638_0090978_555_1628 318
89 3300046471 Ga0495650_0000020 Ga0495650_0000020_75093_76151 318
90 3300046507 Ga0495606_0005980 Ga0495606_0005980_2089_3156 318
91 3300046512 Ga0495610_0001891 Ga0495610_0001891_11037_12095 318
92 3300046512 Ga0495610_0009219 Ga0495610_0009219_2167_3237 318
93 3300046512 Ga0495610_0093987 Ga0495610_0093987_246_1319 318
94 3300046513 Ga0495616_0000623 Ga0495616_0000623_22009_23082 318
95 3300046515 Ga0495620_0056728 Ga0495620_0056728_465_1523 318
96 3300046519 Ga0495632_0012451 Ga0495632_0012451_105_1163 318
97 3300046520 Ga0495637_0008023 Ga0495637_0008023_871_1944 318
98 3300046530 Ga0495654_0000109 Ga0495654_0000109_26479_27537 318
99 3300046616 Ga0495668_0005992 Ga0495668_0005992_1639_2697 318
100 3300046660 Ga0495625_0000271 Ga0495625_0000271_6066_7133 318
101 3300046660 Ga0495625_0007138 Ga0495625_0007138_3061_4128 318
102 3300046660 Ga0495625_0042644 Ga0495625_0042644_1069_2127 318
103 3300046660 Ga0495625_0052884 Ga0495625_0052884_1644_2702 318
104 3300046691 Ga0495670_0096143 Ga0495670_0096143_320_1393 318
105 3300046810 Ga0495660_0005778 Ga0495660_0005778_213_1271 318
106 3300047320 Ga0495672_0003993 Ga0495672_0003993_10908_11966 318
107 3300047469 Ga0495673_0000189 Ga0495673_0000189_21582_22637 318
108 3300047469 Ga0495673_0002175 Ga0495673_0002175_7156_8226 318
109 3300049570 Ga0501033_0110498 Ga0501033_0110498_843_1901 318
110 3300049671 Ga0501238_007512 Ga0501238_007512_97_1155 318
111 3300049823 Ga0501044_0172864 Ga0501044_0172864_671_1729 318
112 3300053087 Ga0500643_022153 Ga0500643_022153_299_1366 318
113 3300053104 Ga0500556_0000111 Ga0500556_0000111_55365_56423 318
114 3300053122 Ga0500608_038553 Ga0500608_038553_1006_2067 318
115 3300053125 Ga0500618_000186 Ga0500618_000186_22331_23389 318
116 3300053136 Ga0500559_0000324 Ga0500559_0000324_12447_13520 318
117 3300053136 Ga0500559_0009247 Ga0500559_0009247_1182_2240 318
118 3300053156 Ga0500622_0008413 Ga0500622_0008413_2609_3676 318
119 3300053727 Ga0500611_003362 Ga0500611_003362_487_1542 318
120 3300053731 Ga0500609_000422 Ga0500609_000422_3072_4145 318
121 iso_pu_bacteria 2643221699 2644547610 318
122 iso_pu_bacteria 2791355048 2792462006 318
123 iso_pu_bacteria 2843744320 2843748868 318
124 iso_pu_bacteria 2849560528 2849563084 318
125 iso_pu_bacteria 2849573788 2849578649 318
126 iso_pu_bacteria 2851153111 2851153506 318
127 iso_pu_bacteria 2898329390 2898333581 318
128 3300005334 Ga0068869_100109864 Ga0068869_1001098642 319
129 3300005339 Ga0070660_100166975 Ga0070660_1001669752 319
130 3300013100 Ga0157373_10002645 Ga0157373_1000264515 319
131 3300013100 Ga0157373_10016224 Ga0157373_100162245 319
132 3300021384 Ga0213876_10000186 Ga0213876_1000018635 319
133 3300039437 Ga0436365_1884511 Ga0436365_1884511_25088_26149 319
134 3300046506 Ga0495583_0000069 Ga0495583_0000069_55517_56602 319
135 iso_pu_bacteria 2857504554 2857507611 319
136 iso_pu_bacteria 2884960567 2884964616 319
137 iso_pu_bacteria 2928531327 2928535518 319
138 3300005844 Ga0068862_100047794 Ga0068862_1000477944 320
139 3300009093 Ga0105240_10005226 Ga0105240_1000522612 320
140 3300025972 Ga0207668_10034035 Ga0207668_100340356 320
141 3300028380 Ga0268265_10052396 Ga0268265_100523962 320
142 3300036401 Ga0373937_0183389 Ga0373937_0183389_235_1335 320
143 3300021384 Ga0213876_10033897 Ga0213876_100338973 321
144 3300028380 Ga0268265_10120579 Ga0268265_101205792 321
145 3300028556 Ga0265337_1009069 Ga0265337_10090694 321
146 3300028800 Ga0265338_10001753 Ga0265338_1000175310 321
147 3300031251 Ga0265327_10070038 Ga0265327_100700382 321
148 3300031711 Ga0265314_10035851 Ga0265314_100358512 321
149 3300037312 Ga0395899_0000013 Ga0395899_0000013_352908_353969 321
150 3300039437 Ga0436365_1470129 Ga0436365_1470129_5111_6175 321
151 3300039447 Ga0436361_0447879 Ga0436361_0447879_1255_2316 321
152 3300046689 Ga0495613_0047710 Ga0495613_0047710_1773_2855 321
153 3300047320 Ga0495672_0001344 Ga0495672_0001344_15280_16338 321
154 3300053087 Ga0500643_001838 Ga0500643_001838_9834_10904 321
155 3300053156 Ga0500622_0025945 Ga0500622_0025945_1848_2918 321
156 3300028800 Ga0265338_10017143 Ga0265338_100171434 322
157 3300029957 Ga0265324_10011993 Ga0265324_100119932 322
158 3300031240 Ga0265320_10060900 Ga0265320_100609002 322
159 3300031251 Ga0265327_10000758 Ga0265327_1000075818 322
160 3300046512 Ga0495610_0002172 Ga0495610_0002172_4097_5170 322
161 3300046524 Ga0495648_0000098 Ga0495648_0000098_4165_5238 322
162 3300046616 Ga0495668_0008528 Ga0495668_0008528_1076_2149 322
163 3300047469 Ga0495673_0000296 Ga0495673_0000296_28849_29922 322
164 3300047472 Ga0495686_0001394 Ga0495686_0001394_18509_19582 322
165 3300049459 Ga0495678_008928 Ga0495678_008928_1667_2740 322
166 3300053086 Ga0500578_0000035 Ga0500578_0000035_38021_39094 322
167 3300053087 Ga0500643_005094 Ga0500643_005094_536_1603 322
168 3300053088 Ga0500644_0002537 Ga0500644_0002537_1383_2456 322
169 3300053091 Ga0500647_0029378 Ga0500647_0029378_1029_2111 322
170 3300053096 Ga0500641_0019074 Ga0500641_0019074_321_1388 322
171 3300053118 Ga0500594_0000350 Ga0500594_0000350_7447_8520 322
172 3300053138 Ga0500564_000082 Ga0500564_000082_1778_2863 322
173 3300053153 Ga0500616_0024512 Ga0500616_0024512_362_1444 322
174 3300053153 Ga0500616_0030048 Ga0500616_0030048_1007_2074 322
175 3300053156 Ga0500622_0000180 Ga0500622_0000180_25882_26955 322
176 3300053177 Ga0500636_0020394 Ga0500636_0020394_2527_3606 322
177 3300053730 Ga0500645_000457 Ga0500645_000457_6655_7737 322
178 iso_pu_bacteria 2585428106 2587916890 322
179 iso_pu_bacteria 2643221640 2644225582 322
180 iso_pu_bacteria 2643221642 2644234973 322
181 3300005327 Ga0070658_10153312 Ga0070658_101533121 323
182 3300021361 Ga0213872_10049721 Ga0213872_100497211 323
183 3300031251 Ga0265327_10000166 Ga0265327_1000016660 323
184 3300041486 Ga0451807_2117202 Ga0451807_2117202_205_1284 323
185 3300053096 Ga0500641_0000413 Ga0500641_0000413_5562_6635 323
186 3300053102 Ga0500554_001921 Ga0500554_001921_1564_2667 323
187 iso_pu_bacteria 2582581279 2585149200 323
188 3300053119 Ga0500595_006690 Ga0500595_006690_1681_2796 324
189 3300053136 Ga0500559_0000040 Ga0500559_0000040_1237_2334 324
190 3300042156 Ga0439446_0018312 Ga0439446_0018312_694_1782 326
191 3300046660 Ga0495625_0035743 Ga0495625_0035743_34_1122 326
192 3300046794 Ga0495589_0005263 Ga0495589_0005263_4059_5147 326
193 3300048909 Ga0496106_0018427 Ga0496106_0018427_757_1857 326
194 3300048910 Ga0496107_0000019 Ga0496107_0000019_145347_146447 326
195 3300048924 Ga0496121_0056999 Ga0496121_0056999_96_1196 326
196 3300053142 Ga0500577_0007421 Ga0500577_0007421_1651_2739 326
197 3300046512 Ga0495610_0004295 Ga0495610_0004295_110_1183 328
198 3300046522 Ga0495643_0000199 Ga0495643_0000199_83045_84118 328
199 3300046558 Ga0495633_0024436 Ga0495633_0024436_1403_2476 328
200 iso_pu_bacteria 2510917021 2511127990 328
201 iso_pu_bacteria 8054302542 8054305764 328
202 3300005844 Ga0068862_100008274 Ga0068862_1000082747 329
203 3300009101 Ga0105247_10030037 Ga0105247_100300373 329
204 3300028380 Ga0268265_10001880 Ga0268265_1000188016 329
205 3300046453 Ga0495627_000905 Ga0495627_000905_6329_7414 329
206 3300046471 Ga0495650_0001649 Ga0495650_0001649_13214_14299 329
207 3300046512 Ga0495610_0000018 Ga0495610_0000018_151063_152148 329
208 3300046515 Ga0495620_0022457 Ga0495620_0022457_980_2065 329
209 3300046519 Ga0495632_0001484 Ga0495632_0001484_7301_8386 329
210 3300047470 Ga0495681_0000020 Ga0495681_0000020_161436_162521 329
211 3300049581 Ga0501047_0144881 Ga0501047_0144881_673_1734 329
212 3300005289 Ga0065704_10076002 Ga0065704_100760025 330
213 3300005353 Ga0070669_100004389 Ga0070669_1000043894 330
214 3300005355 Ga0070671_100012712 Ga0070671_1000127125 330
215 3300005367 Ga0070667_100155298 Ga0070667_1001552983 330
216 3300005548 Ga0070665_100000107 Ga0070665_10000010711 330
217 3300005841 Ga0068863_100002972 Ga0068863_10000297216 330
218 3300005842 Ga0068858_100438754 Ga0068858_1004387542 330
219 3300005844 Ga0068862_100017546 Ga0068862_1000175464 330
220 3300009011 Ga0105251_10000540 Ga0105251_100005403 330
221 3300009177 Ga0105248_10021548 Ga0105248_100215482 330
222 3300025735 Ga0207713_1004470 Ga0207713_10044709 330
223 3300025923 Ga0207681_10001134 Ga0207681_1000113411 330
224 3300025931 Ga0207644_10000736 Ga0207644_1000073610 330
225 3300025941 Ga0207711_10009542 Ga0207711_100095427 330
226 3300025986 Ga0207658_10065049 Ga0207658_100650491 330
227 3300026088 Ga0207641_10067325 Ga0207641_100673253 330
228 3300028379 Ga0268266_10001429 Ga0268266_1000142918 330
229 3300028380 Ga0268265_10017095 Ga0268265_100170957 330
230 3300028381 Ga0268264_10011097 Ga0268264_100110974 330
231 3300031616 Ga0307508_10012224 Ga0307508_100122245 330
232 3300048906 Ga0496103_0009196 Ga0496103_0009196_3630_4703 330
233 3300048919 Ga0496116_0036099 Ga0496116_0036099_38_1111 330
234 3300048920 Ga0496117_0002537 Ga0496117_0002537_21224_22297 330
235 3300048921 Ga0496118_0030423 Ga0496118_0030423_942_2015 330
236 3300048924 Ga0496121_0015784 Ga0496121_0015784_5652_6725 330
237 3300048928 Ga0496125_0057427 Ga0496125_0057427_164_1237 330
238 3300048929 Ga0496126_0061068 Ga0496126_0061068_1474_2547 330
239 3300017792 Ga0163161_10069716 Ga0163161_100697162 331
240 3300046500 Ga0495596_0000730 Ga0495596_0000730_2285_3358 331
241 3300046501 Ga0495607_0003515 Ga0495607_0003515_7768_8841 331
242 3300046522 Ga0495643_0023854 Ga0495643_0023854_2150_3223 331
243 3300046522 Ga0495643_0044526 Ga0495643_0044526_648_1721 331
244 3300046660 Ga0495625_0077224 Ga0495625_0077224_293_1366 331
245 2162886007 SwRhRL2b_contig_1688787 SwRhRL2b_0052.00002020 332
246 3300005289 Ga0065704_10000190 Ga0065704_10000190191 332
247 3300005367 Ga0070667_100000198 Ga0070667_10000019830 332
248 3300005367 Ga0070667_100008730 Ga0070667_1000087309 332
249 3300025931 Ga0207644_10084085 Ga0207644_100840852 332
250 3300025986 Ga0207658_10004078 Ga0207658_100040786 332
251 3300048090 Ga0495615_0000074 Ga0495615_0000074_28180_29253 332
252 3300048907 Ga0496104_0035044 Ga0496104_0035044_3012_4079 332
253 3300048908 Ga0496105_0005799 Ga0496105_0005799_6419_7486 332
254 3300048925 Ga0496122_0004735 Ga0496122_0004735_15553_16626 332
255 3300048926 Ga0496123_0001822 Ga0496123_0001822_1589_2662 332
256 3300053136 Ga0500559_0000300 Ga0500559_0000300_19925_21007 332
257 3300053136 Ga0500559_0002750 Ga0500559_0002750_2756_3838 332
258 3300053178 Ga0500637_0002914 Ga0500637_0002914_4318_5400 332
259 3300053730 Ga0500645_003443 Ga0500645_003443_1513_2595 332

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02504

FA_synthesis

Fatty acid synthesis protein

24

351

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
1vi1-assembly2.cif.gz_B crystal structure of a fatty acid/phospholipid synthesis protein 0.8843 4 315
1vi1-assembly1.cif.gz_A crystal structure of a fatty acid/phospholipid synthesis protein 0.8799 4 314
6a1k-assembly1.cif.gz_B phosphate acyltransferase plsx from b.subtilis 0.873 5 312
1u7n-assembly1.cif.gz_B crystal structure of the fatty acid/phospholipid synthesis protein plsx from enterococcus faecalis v583 0.8603 5 312
1vi1-assembly2.cif.gz_B crystal structure of a fatty acid/phospholipid synthesis protein 0.8581 4 315
ID Description Score Start End Superfamily
af_P27247_3_343_3.40.718.10 Alpha Beta;3-Layer(aba) Sandwich;Isopropylmalate Dehydrogenase;Isopropylmalate Dehydrogenase 0.8443 4 317 3.40.718.10
1u7nB00 Alpha Beta;3-Layer(aba) Sandwich;Isopropylmalate Dehydrogenase;Isopropylmalate Dehydrogenase 0.8324 7 312 3.40.718.10
1u7nB00 Alpha Beta;3-Layer(aba) Sandwich;Isopropylmalate Dehydrogenase;Isopropylmalate Dehydrogenase 0.8197 7 312 3.40.718.10
af_P27247_3_343_3.40.718.10 Alpha Beta;3-Layer(aba) Sandwich;Isopropylmalate Dehydrogenase;Isopropylmalate Dehydrogenase 0.8006 4 317 3.40.718.10
af_O07230_1_301_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.7521 1 65 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A520I4I7-F1-model_v4 phosphate acyltransferase (EC 2.3.1.274) 0.9497 4 92 GO:0005737
GO:0006633
GO:0008654
GO:0043811
AF-A0A6L3ZRN4-F1-model_v4 deleted 0.9422 98 321
AF-A0A258BN49-F1-model_v4 phosphate acyltransferase (EC 2.3.1.274) 0.9365 90 318 GO:0005737
GO:0006633
GO:0008654
GO:0043811
AF-A0A160TI93-F1-model_v4 phosphate acyltransferase (EC 2.3.1.274) 0.9341 11 321 GO:0005737
GO:0006633
GO:0008654
GO:0016747
AF-A0A383CVV7-F1-model_v4 phosphate acyltransferase (EC 2.3.1.274) 0.9312 107 315 GO:0005737
GO:0006633
GO:0008654
GO:0016747

Feature Viewer

pLDDT pTM Quality
80.12 0.8 High
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Predicted Structure (AlphaFold2)

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