F368438

General Info

Members Datasets Scaffolds Average Seq Length
258 185 516 600

Family's Representative Sequence

Representative Sequence 3300050492|nmdc:mga0yw44_40929_c1|nmdc:mga0yw44_40929_c1_557_2575
Length 672
Sequence MMLGADPTRIEGTRLGKGVVRRVLREFARPYRTLLVGFVGTIVVEAVLDLGPPLLFRQIIDHAIPEKNSGALNVLAALVVGLAVLSSALSFVERYCSSKIGEGLIFDLRVRLFGHVQRMPISFFTRTQTGALISRLNNDVLGAQRALTSTLGSVISNVIVLTTTLVAMFILDWRVTIVALILLPLFIIPAKRVGRRMQTLTRAGMNYDADMNTRMTERLNVSGALLVKLFGHQPRESSEFADRAGKVRDIGVKTAMYGRTFFIALGLVATLGTSAVYWLGGLSVINGTITLGTLVAMAALVTRIYQPLTALTNARVDVMTAFVSFDRVFEIIDMPNPITDRPGAIDLVDPAGRIELDDVWFRYPAASDHVIESLVNPSGAPVAHGGHAETMNGTAAGDGDGPSPEAVSEKFVVRGVSAVVEPGQMVALVGPSGAGKTTLSSLVPRLYDVTEGAVRIDGHDVRDLTQDSLRAAIGVVSQDPHLFHESVIDNLRYANPAATDEQVIAACRAAQIHDVLAGLPAGYDTIVGERGHRLSGGEKQRIAIARMLLKDPAVVVLDEATSHLDSENEALVQAALTNALDGRTSIVIAHRLSTITSADRILVIDGGELVEQGTHVELLAEGGLYADLYHTLVRSEAAGYRSGSPSPTRHPVDAPGESDPAATILSVTPPLA

Samples

Sample ID Description Type Environment
1 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
17 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
18 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
22 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
27 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
28 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
29 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
30 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
31 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
32 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
33 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
34 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
35 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
36 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
37 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
38 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
39 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
40 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
41 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
42 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
45 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
47 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
48 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
49 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
50 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
51 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
52 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
53 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
54 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
55 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
56 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
75 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
77 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
78 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
79 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
80 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
81 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
82 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
83 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
84 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
85 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
86 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
87 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
88 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
89 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
90 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
91 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
92 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
93 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
94 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
95 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
96 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
97 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
98 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
99 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
100 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
101 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
102 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
103 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
104 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
105 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
106 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
107 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
108 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
109 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
110 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
111 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
112 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
113 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
114 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
115 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
116 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
117 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
118 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
119 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
120 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
121 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
122 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
137 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
138 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
139 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
140 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
141 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
142 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
143 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
144 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
145 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
146 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
147 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
148 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
149 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
152 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
153 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
154 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
155 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
156 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
157 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
158 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
159 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
160 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
161 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
162 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
163 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
164 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
165 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
166 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
167 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
168 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
169 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
170 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
171 2571042588 Paenibacillus zanthoxyli JH29 Isolate Unclassified
172 2579778775 Paenibacillus durus P3L-5 Isolate Unclassified
173 2619619294 Paenibacillus durus ATCC 35681 Isolate Unclassified
174 2675903058 Actinopolymorpha cephalotaxi CPCC 202808 Isolate Rhizosphere
175 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
176 2827628540 Actinopolymorpha cephalotaxi DSM 45117 Isolate Rhizosphere
177 2837183177 Egibacter rhizosphaerae EGI 80759 Isolate Unclassified
178 2856741275 Microbispora triticiradicis NEAU-HRDPA2-9 Isolate Unclassified
179 2857710386 Brevibacterium sp. R-73093 Isolate Unclassified
180 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
181 2891554331 Microbispora sp. CL1-1 Isolate Unclassified
182 2891562705 Microbispora tritici MT50 Isolate Unclassified
183 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
184 2907202186 Paenibacillus sp. HJL G12 Isolate Unclassified
185 8055172936 Sphaerisporangium perillae NEAU-ZS1 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 93.8
Metatranscriptomes 0
Isolates 6.2

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.26
Nodule 0
Rhizoplane 3.49
Rhizosphere 84.5
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga0yw44_40929_c1 3300050492 Bacteria 2756
2 JGI25407J50210_10000279 3300003373 Bacteria 9144
3 Ga0065712_10105931 3300005290 Bacteria 1928
4 Ga0070658_10006129 3300005327 Bacteria 9752
5 Ga0070658_10009185 3300005327 Bacteria 7948
6 Ga0070658_10038800 3300005327 Bacteria 3841
7 Ga0070683_100022676 3300005329 Bacteria 5614
8 Ga0070683_100026600 3300005329 Bacteria 5212
9 Ga0070670_100054341 3300005331 Bacteria 3438
10 Ga0070680_100000369 3300005336 Bacteria 30305
11 Ga0070680_100083597 3300005336 Bacteria 2636
12 Ga0070660_100001787 3300005339 Bacteria 14762
13 Ga0070660_100012900 3300005339 Bacteria 5978
14 Ga0070668_100005902 3300005347 Bacteria 9078
15 Ga0070673_100024922 3300005364 Bacteria 4394
16 Ga0070673_100122746 3300005364 Bacteria 2170
17 Ga0070714_100018702 3300005435 Bacteria 5635
18 Ga0070713_100010013 3300005436 Bacteria 6831
19 Ga0070700_100064700 3300005441 Bacteria 2316
20 Ga0070708_100001127 3300005445 Bacteria 20470
21 Ga0070708_100080134 3300005445 Bacteria 2955
22 Ga0070681_10110353 3300005458 Bacteria 2690
23 Ga0068867_100027382 3300005459 Bacteria 4095
24 Ga0070685_10008196 3300005466 Bacteria 5358
25 Ga0070706_100013434 3300005467 Bacteria 7570
26 Ga0070679_100183457 3300005530 Bacteria 2064
27 Ga0070684_100050535 3300005535 Bacteria 3611
28 Ga0068853_100004801 3300005539 Bacteria 10512
29 Ga0070704_100052032 3300005549 Bacteria 2887
30 Ga0068855_100034028 3300005563 Bacteria 6079
31 Ga0068852_100084907 3300005616 Bacteria 2819
32 Ga0068860_100037555 3300005843 Bacteria 4636
33 Ga0068862_100012271 3300005844 Bacteria 7085
34 Ga0081455_10000396 3300005937 Bacteria 57399
35 Ga0081455_10001268 3300005937 Bacteria 31556
36 Ga0081538_10000315 3300005981 Bacteria 55243
37 Ga0081538_10000932 3300005981 Bacteria 31558
38 Ga0081538_10002787 3300005981 Bacteria 16742
39 Ga0075365_10026293 3300006038 Bacteria 3693
40 Ga0075365_10040889 3300006038 Bacteria 3026
41 Ga0075365_10056235 3300006038 Bacteria 2615
42 Ga0075363_100049821 3300006048 Bacteria 2231
43 Ga0075364_10008545 3300006051 Bacteria 6123
44 Ga0068871_100024798 3300006358 Bacteria 4655
45 Ga0075428_100000001 3300006844 Bacteria 772630
46 Ga0075428_100029623 3300006844 Bacteria 6056
47 Ga0075428_100055504 3300006844 Bacteria 4340
48 Ga0075428_100086936 3300006844 Bacteria 3410
49 Ga0075428_100176810 3300006844 Bacteria 2311
50 Ga0075430_100002512 3300006846 Bacteria 15292
51 Ga0075430_100031981 3300006846 Bacteria 4466
52 Ga0075430_100125105 3300006846 Bacteria 2143
53 Ga0075431_100001047 3300006847 Bacteria 24688
54 Ga0075431_100013209 3300006847 Bacteria 8342
55 Ga0075433_10002060 3300006852 Bacteria 15196
56 Ga0075434_100001568 3300006871 Bacteria 19364
57 Ga0075429_100004879 3300006880 Bacteria 11558
58 Ga0075429_100011074 3300006880 Bacteria 7805
59 Ga0068865_100107512 3300006881 Bacteria 2052
60 Ga0075436_100005022 3300006914 Bacteria 9093
61 Ga0075435_100009597 3300007076 Bacteria 7022
62 Ga0099794_10017215 3300007265 Bacteria 3218
63 Ga0111539_10003679 3300009094 Bacteria 20188
64 Ga0111539_10011521 3300009094 Bacteria 11096
65 Ga0105245_10024652 3300009098 Bacteria 5284
66 Ga0114129_10156340 3300009147 Bacteria 3117
67 Ga0105242_10007557 3300009176 Bacteria 8366
68 Ga0105242_10024474 3300009176 Bacteria 4769
69 Ga0105238_10039401 3300009551 Bacteria 4791
70 Ga0105249_10000081 3300009553 Bacteria 137945
71 Ga0157373_10040714 3300013100 Bacteria 3324
72 Ga0157369_10009953 3300013105 Bacteria 10862
73 Ga0157369_10016043 3300013105 Bacteria 8430
74 Ga0157369_10023145 3300013105 Bacteria 6922
75 Ga0157369_10129677 3300013105 Bacteria 2672
76 Ga0157378_10038573 3300013297 Bacteria 4234
77 Ga0157372_10002145 3300013307 Bacteria 21444
78 Ga0157372_10014978 3300013307 Bacteria 8299
79 Ga0157372_10051415 3300013307 Bacteria 4586
80 Ga0157372_10084696 3300013307 Bacteria 3594
81 Ga0157380_10093498 3300014326 Bacteria 2486
82 Ga0182008_10003817 3300014497 Bacteria 8958
83 Ga0157376_10027677 3300014969 Bacteria 4497
84 Ga0207705_10006195 3300025909 Bacteria 8893
85 Ga0207705_10009683 3300025909 Bacteria 7008
86 Ga0207707_10014228 3300025912 Bacteria 6931
87 Ga0207657_10075448 3300025919 Bacteria 2846
88 Ga0207649_10062334 3300025920 Bacteria 2350
89 Ga0207652_10174489 3300025921 Bacteria 1930
90 Ga0207650_10039749 3300025925 Bacteria 3438
91 Ga0207687_10012430 3300025927 Bacteria 5563
92 Ga0207700_10007116 3300025928 Bacteria 6815
93 Ga0207664_10069062 3300025929 Bacteria 2840
94 Ga0207644_10019187 3300025931 Bacteria 4636
95 Ga0207667_10061774 3300025949 Bacteria 3919
96 Ga0207651_10069377 3300025960 Bacteria 2489
97 Ga0207651_10101323 3300025960 Bacteria 2137
98 Ga0207712_10000087 3300025961 Bacteria 106680
99 Ga0207668_10006748 3300025972 Bacteria 6793
100 Ga0207708_10016213 3300026075 Bacteria 5598
101 Ga0207708_10086639 3300026075 Bacteria 2410
102 Ga0207648_10040905 3300026089 Bacteria 4072
103 Ga0207674_10041462 3300026116 Bacteria 4761
104 Ga0207675_100018416 3300026118 Bacteria 6511
105 Ga0207675_100064067 3300026118 Bacteria 3435
106 Ga0207675_100080027 3300026118 Bacteria 3062
107 Ga0207428_10009980 3300027907 Bacteria 8500
108 Ga0268265_10008525 3300028380 Bacteria 6930
109 Ga0268265_10019058 3300028380 Bacteria 4764
110 Ga0265338_10000134 3300028800 Bacteria 135896
111 Ga0265338_10077656 3300028800 Bacteria 2806
112 Ga0265325_10000801 3300031241 Bacteria 22728
113 Ga0265339_10000830 3300031249 Bacteria 23799
114 Ga0265327_10019900 3300031251 Bacteria 4110
115 Ga0307513_10002872 3300031456 Bacteria 23596
116 Ga0265313_10001647 3300031595 Bacteria 20696
117 Ga0265314_10029078 3300031711 Bacteria 4112
118 Ga0316578_10002536 3300031728 Bacteria 8062
119 Ga0316577_10020121 3300031733 Bacteria 3699
120 Ga0307410_10014457 3300031852 Bacteria 4644
121 Ga0307409_100026030 3300031995 Bacteria 4118
122 Ga0307409_100050875 3300031995 Bacteria 3167
123 Ga0373948_0002996 3300034817 Bacteria 2552
124 Ga0316574_0015489 3300035398 Bacteria 4425
125 Ga0373931_0000003 3300035691 Bacteria 560286
126 Ga0373931_0000316 3300035691 Bacteria 20282
127 Ga0316584_0031143 3300036712 Bacteria 3944
128 Ga0395898_0128176 3300037466 Bacteria 2431
129 Ga0395905_0108212 3300037471 Bacteria 2609
130 Ga0395901_0036461 3300038443 Bacteria 5083
131 Ga0400485_13147 3300038735 Bacteria 19957
132 Ga0400483_003728 3300039062 Bacteria 5177
133 Ga0400483_016226 3300039062 Bacteria 90099
134 Ga0400483_240658 3300039062 Bacteria 3248
135 Ga0436365_0970602 3300039437 Bacteria 4361
136 Ga0436365_1057709 3300039437 Bacteria 4187
137 Ga0436362_1179689 3300039453 Bacteria 3252
138 Ga0439464_0008230 3300042439 Bacteria 2733
139 Ga0439460_0001025 3300042461 Bacteria 6481
140 Ga0451577_0004592 3300042876 Bacteria 14509
141 Ga0451577_0055721 3300042876 Bacteria 3526
142 Ga0439440_0000121 3300042993 Bacteria 10827
143 Ga0453683_0007894 3300044673 Bacteria 7178
144 Ga0466966_0102203 3300044684 Bacteria 1772
145 Ga0466961_0038567 3300044693 Bacteria 3065
146 Ga0466961_0099552 3300044693 Bacteria 1832
147 Ga0453684_0041365 3300044712 Bacteria 6235
148 Ga0453684_0042108 3300044712 Bacteria 6162
149 Ga0453684_0107230 3300044712 Bacteria 3402
150 Ga0466959_0072068 3300045049 Bacteria 2501
151 Ga0495580_0014016 3300046472 Bacteria 6098
152 Ga0495594_0011292 3300046499 Bacteria 4640
153 Ga0495628_0001507 3300046516 Bacteria 21338
154 Ga0495640_0023509 3300046533 Bacteria 4487
155 Ga0495658_0019884 3300046683 Bacteria 3512
156 Ga0495613_0001147 3300046689 Bacteria 20220
157 Ga0495674_0039744 3300047319 Bacteria 4214
158 Ga0495684_0074175 3300047471 Bacteria 2585
159 Ga0496101_0012590 3300048904 Bacteria 5649
160 Ga0496105_0031842 3300048908 Bacteria 4325
161 Ga0496105_0075506 3300048908 Bacteria 2783
162 Ga0496110_0001711 3300048913 Bacteria 16151
163 Ga0496110_0042873 3300048913 Bacteria 3949
164 Ga0496111_0188140 3300048914 Bacteria 1535
165 Ga0496112_0009266 3300048915 Bacteria 8852
166 Ga0496113_0047199 3300048916 Bacteria 3200
167 Ga0496114_0151802 3300048917 Bacteria 2010
168 Ga0501032_0010917 3300049569 Bacteria 6529
169 Ga0501033_0008775 3300049570 Bacteria 7813
170 Ga0501033_0010740 3300049570 Bacteria 7020
171 Ga0501033_0021976 3300049570 Bacteria 4812
172 Ga0501034_0001276 3300049571 Bacteria 34102
173 Ga0501034_0006656 3300049571 Bacteria 12393
174 Ga0501034_0019693 3300049571 Bacteria 6898
175 Ga0501034_0034538 3300049571 Bacteria 5127
176 Ga0501034_0124661 3300049571 Bacteria 2561
177 Ga0501036_0043883 3300049572 Bacteria 3787
178 Ga0501037_0013044 3300049573 Bacteria 6128
179 Ga0501038_0021764 3300049574 Bacteria 5754
180 Ga0501038_0052570 3300049574 Bacteria 3512
181 Ga0501039_0028281 3300049575 Bacteria 4315
182 Ga0501040_0058922 3300049576 Bacteria 2638
183 Ga0501041_0062335 3300049577 Bacteria 2282
184 Ga0501042_0029712 3300049578 Bacteria 3855
185 Ga0501043_0037257 3300049579 Bacteria 3825
186 Ga0501043_0124761 3300049579 Bacteria 2019
187 Ga0501046_0013561 3300049580 Bacteria 6895
188 Ga0501047_0009650 3300049581 Bacteria 9123
189 Ga0501047_0052110 3300049581 Bacteria 3955
190 Ga0501048_0018026 3300049582 Bacteria 5196
191 Ga0501068_0000891 3300049584 Bacteria 15591
192 Ga0501068_0010958 3300049584 Bacteria 5104
193 Ga0501069_0003019 3300049585 Bacteria 8650
194 Ga0501069_0018914 3300049585 Bacteria 3719
195 Ga0501070_0010133 3300049586 Bacteria 7979
196 Ga0501070_0016461 3300049586 Bacteria 6214
197 Ga0501071_0011353 3300049587 Bacteria 6000
198 Ga0501072_0001045 3300049588 Bacteria 20501
199 Ga0501072_0002254 3300049588 Bacteria 14406
200 Ga0501073_0000846 3300049589 Bacteria 21830
201 Ga0501074_0032474 3300049590 Bacteria 3782
202 Ga0501074_0089195 3300049590 Bacteria 2208
203 Ga0501075_0012145 3300049591 Bacteria 6114
204 Ga0501076_0003189 3300049592 Bacteria 11438
205 Ga0501079_0010045 3300049741 Bacteria 7186
206 Ga0501080_0001254 3300049742 Bacteria 21139
207 Ga0501080_0045759 3300049742 Bacteria 4074
208 Ga0501081_0006299 3300049743 Bacteria 7690
209 Ga0501083_0006460 3300049744 Bacteria 8316
210 Ga0501035_0132825 3300049822 Bacteria 2169
211 Ga0501044_0001502 3300049823 Bacteria 27345
212 Ga0501044_0014679 3300049823 Bacteria 8445
213 Ga0501044_0178284 3300049823 Bacteria 2093
214 Ga0501045_0012806 3300049824 Bacteria 5909
215 nmdc:mga00v17_8963_c1 3300050491 Bacteria 5398
216 nmdc:mga0yw44_44_c1 3300050492 Bacteria 41809
217 nmdc:mga05p37_29723_c1 3300050507 Bacteria 6668
218 nmdc:mga09592_307_c1 3300050508 Bacteria 35790
219 nmdc:mga09592_9783_c1 3300050508 Bacteria 7792
220 nmdc:mga0qj67_43655_c1 3300050509 Bacteria 3531
221 nmdc:mga0qj67_4515_c1 3300050509 Bacteria 10080
222 nmdc:mga06r32_101170_c1 3300050510 Bacteria 2828
223 nmdc:mga06r32_153_c1 3300050510 Bacteria 52808
224 nmdc:mga06r32_91810_c1 3300050510 Bacteria 2968
225 nmdc:mga08y16_3774_c1 3300050511 Bacteria 15776
226 nmdc:mga08y16_38565_c1 3300050511 Bacteria 5017
227 nmdc:mga0n895_18427_c1 3300050512 Bacteria 6461
228 nmdc:mga08x19_15993_c1 3300050514 Bacteria 4571
229 nmdc:mga0a205_66373_c1 3300050515 Bacteria 3486
230 Ga0495601_0005709 3300053077 Bacteria 7253
231 Ga0500635_0001364 3300053080 Bacteria 5855
232 Ga0495595_0002542 3300053084 Bacteria 7159
233 Ga0495595_0018689 3300053084 Bacteria 2998
234 Ga0495619_0001955 3300053085 Bacteria 13745
235 Ga0495619_0060032 3300053085 Bacteria 2527
236 Ga0500566_0000517 3300053094 Bacteria 21548
237 Ga0500568_0000068 3300053139 Bacteria 103847
238 Ga0501084_0001501 3300054114 Bacteria 18521
239 Ga0501084_0001894 3300054114 Bacteria 16698
240 Ga0501084_0099092 3300054114 Bacteria 2447
241 Ga0501082_0012612 3300060353 Bacteria 7265
242 Ga0530510_0008843 3300061734 Bacteria 7048
243 2515856131 2515154155 Bacteria 7985436
244 2573041296 2571042588 Bacteria 5045676
245 2580935126 2579778775 Bacteria 5360914
246 2621274816 2619619294 Bacteria 5575484
247 2676476057 2675903058 Bacteria 6822861
248 2816510371 2816332139 Bacteria 9138787
249 2827633887 2827628540 Bacteria 6858585
250 2837183257 2837183177 Bacteria 4637169
251 2856742951 2856741275 Bacteria 8096094
252 2857712494 2857710386 Bacteria 3186771
253 2891402959 2891395885 Bacteria 9251614
254 2891554714 2891554331 Bacteria 8812224
255 2891568794 2891562705 Bacteria 8039471
256 2895436223 2895427314 Bacteria 13147766
257 2907204830 2907202186 Bacteria 6632024
258 8055179321 8055172936 Bacteria 9305943
259 nmdc:mga0yw44_40929_c1
260 JGI25407J50210_10000279
261 Ga0065712_10105931
262 Ga0070658_10006129
263 Ga0070658_10009185
264 Ga0070658_10038800
265 Ga0070683_100022676
266 Ga0070683_100026600
267 Ga0070670_100054341
268 Ga0070680_100000369
269 Ga0070680_100083597
270 Ga0070660_100001787
271 Ga0070660_100012900
272 Ga0070668_100005902
273 Ga0070673_100024922
274 Ga0070673_100122746
275 Ga0070714_100018702
276 Ga0070713_100010013
277 Ga0070700_100064700
278 Ga0070708_100001127
279 Ga0070708_100080134
280 Ga0070681_10110353
281 Ga0068867_100027382
282 Ga0070685_10008196
283 Ga0070706_100013434
284 Ga0070679_100183457
285 Ga0070684_100050535
286 Ga0068853_100004801
287 Ga0070704_100052032
288 Ga0068855_100034028
289 Ga0068852_100084907
290 Ga0068860_100037555
291 Ga0068862_100012271
292 Ga0081455_10000396
293 Ga0081455_10001268
294 Ga0081538_10000315
295 Ga0081538_10000932
296 Ga0081538_10002787
297 Ga0075365_10026293
298 Ga0075365_10040889
299 Ga0075365_10056235
300 Ga0075363_100049821
301 Ga0075364_10008545
302 Ga0068871_100024798
303 Ga0075428_100000001
304 Ga0075428_100029623
305 Ga0075428_100055504
306 Ga0075428_100086936
307 Ga0075428_100176810
308 Ga0075430_100002512
309 Ga0075430_100031981
310 Ga0075430_100125105
311 Ga0075431_100001047
312 Ga0075431_100013209
313 Ga0075433_10002060
314 Ga0075434_100001568
315 Ga0075429_100004879
316 Ga0075429_100011074
317 Ga0068865_100107512
318 Ga0075436_100005022
319 Ga0075435_100009597
320 Ga0099794_10017215
321 Ga0111539_10003679
322 Ga0111539_10011521
323 Ga0105245_10024652
324 Ga0114129_10156340
325 Ga0105242_10007557
326 Ga0105242_10024474
327 Ga0105238_10039401
328 Ga0105249_10000081
329 Ga0157373_10040714
330 Ga0157369_10009953
331 Ga0157369_10016043
332 Ga0157369_10023145
333 Ga0157369_10129677
334 Ga0157378_10038573
335 Ga0157372_10002145
336 Ga0157372_10014978
337 Ga0157372_10051415
338 Ga0157372_10084696
339 Ga0157380_10093498
340 Ga0182008_10003817
341 Ga0157376_10027677
342 Ga0207705_10006195
343 Ga0207705_10009683
344 Ga0207707_10014228
345 Ga0207657_10075448
346 Ga0207649_10062334
347 Ga0207652_10174489
348 Ga0207650_10039749
349 Ga0207687_10012430
350 Ga0207700_10007116
351 Ga0207664_10069062
352 Ga0207644_10019187
353 Ga0207667_10061774
354 Ga0207651_10069377
355 Ga0207651_10101323
356 Ga0207712_10000087
357 Ga0207668_10006748
358 Ga0207708_10016213
359 Ga0207708_10086639
360 Ga0207648_10040905
361 Ga0207674_10041462
362 Ga0207675_100018416
363 Ga0207675_100064067
364 Ga0207675_100080027
365 Ga0207428_10009980
366 Ga0268265_10008525
367 Ga0268265_10019058
368 Ga0265338_10000134
369 Ga0265338_10077656
370 Ga0265325_10000801
371 Ga0265339_10000830
372 Ga0265327_10019900
373 Ga0307513_10002872
374 Ga0265313_10001647
375 Ga0265314_10029078
376 Ga0316578_10002536
377 Ga0316577_10020121
378 Ga0307410_10014457
379 Ga0307409_100026030
380 Ga0307409_100050875
381 Ga0373948_0002996
382 Ga0316574_0015489
383 Ga0373931_0000003
384 Ga0373931_0000316
385 Ga0316584_0031143
386 Ga0395898_0128176
387 Ga0395905_0108212
388 Ga0395901_0036461
389 Ga0400485_13147
390 Ga0400483_003728
391 Ga0400483_016226
392 Ga0400483_240658
393 Ga0436365_0970602
394 Ga0436365_1057709
395 Ga0436362_1179689
396 Ga0439464_0008230
397 Ga0439460_0001025
398 Ga0451577_0004592
399 Ga0451577_0055721
400 Ga0439440_0000121
401 Ga0453683_0007894
402 Ga0466966_0102203
403 Ga0466961_0038567
404 Ga0466961_0099552
405 Ga0453684_0041365
406 Ga0453684_0042108
407 Ga0453684_0107230
408 Ga0466959_0072068
409 Ga0495580_0014016
410 Ga0495594_0011292
411 Ga0495628_0001507
412 Ga0495640_0023509
413 Ga0495658_0019884
414 Ga0495613_0001147
415 Ga0495674_0039744
416 Ga0495684_0074175
417 Ga0496101_0012590
418 Ga0496105_0031842
419 Ga0496105_0075506
420 Ga0496110_0001711
421 Ga0496110_0042873
422 Ga0496111_0188140
423 Ga0496112_0009266
424 Ga0496113_0047199
425 Ga0496114_0151802
426 Ga0501032_0010917
427 Ga0501033_0008775
428 Ga0501033_0010740
429 Ga0501033_0021976
430 Ga0501034_0001276
431 Ga0501034_0006656
432 Ga0501034_0019693
433 Ga0501034_0034538
434 Ga0501034_0124661
435 Ga0501036_0043883
436 Ga0501037_0013044
437 Ga0501038_0021764
438 Ga0501038_0052570
439 Ga0501039_0028281
440 Ga0501040_0058922
441 Ga0501041_0062335
442 Ga0501042_0029712
443 Ga0501043_0037257
444 Ga0501043_0124761
445 Ga0501046_0013561
446 Ga0501047_0009650
447 Ga0501047_0052110
448 Ga0501048_0018026
449 Ga0501068_0000891
450 Ga0501068_0010958
451 Ga0501069_0003019
452 Ga0501069_0018914
453 Ga0501070_0010133
454 Ga0501070_0016461
455 Ga0501071_0011353
456 Ga0501072_0001045
457 Ga0501072_0002254
458 Ga0501073_0000846
459 Ga0501074_0032474
460 Ga0501074_0089195
461 Ga0501075_0012145
462 Ga0501076_0003189
463 Ga0501079_0010045
464 Ga0501080_0001254
465 Ga0501080_0045759
466 Ga0501081_0006299
467 Ga0501083_0006460
468 Ga0501035_0132825
469 Ga0501044_0001502
470 Ga0501044_0014679
471 Ga0501044_0178284
472 Ga0501045_0012806
473 nmdc:mga00v17_8963_c1
474 nmdc:mga0yw44_44_c1
475 nmdc:mga05p37_29723_c1
476 nmdc:mga09592_307_c1
477 nmdc:mga09592_9783_c1
478 nmdc:mga0qj67_43655_c1
479 nmdc:mga0qj67_4515_c1
480 nmdc:mga06r32_101170_c1
481 nmdc:mga06r32_153_c1
482 nmdc:mga06r32_91810_c1
483 nmdc:mga08y16_3774_c1
484 nmdc:mga08y16_38565_c1
485 nmdc:mga0n895_18427_c1
486 nmdc:mga08x19_15993_c1
487 nmdc:mga0a205_66373_c1
488 Ga0495601_0005709
489 Ga0500635_0001364
490 Ga0495595_0002542
491 Ga0495595_0018689
492 Ga0495619_0001955
493 Ga0495619_0060032
494 Ga0500566_0000517
495 Ga0500568_0000068
496 Ga0501084_0001501
497 Ga0501084_0001894
498 Ga0501084_0099092
499 Ga0501082_0012612
500 Ga0530510_0008843
501 2515856131
502 2573041296
503 2580935126
504 2621274816
505 2676476057
506 2816510371
507 2827633887
508 2837183257
509 2856742951
510 2857712494
511 2891402959
512 2891554714
513 2891568794
514 2895436223
515 2907204830
516 8055179321

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00664

ABC_membrane

ABC transporter transmembrane region

34

308

0.96

PF00005

ABC_tran

ABC transporter

413

562

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ghi-assembly4.cif.gz_D crystal structure of plasmodium yoelii multidrug resistance protein 2 0.9502 337 599
2ghi-assembly1.cif.gz_A crystal structure of plasmodium yoelii multidrug resistance protein 2 0.9431 337 601
3nhb-assembly1.cif.gz_A nucleotide binding domain of human abcb6 (adp bound structure) 0.9408 310 599
6bzr-assembly2.cif.gz_A human abcc6 nbd2 in adp-bound state 0.938 336 600
4q7l-assembly3.cif.gz_C structure of nbd288 of tm287/288 0.9361 336 599
ID Description Score Start End Superfamily
af_Q19015_1020_1270_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9597 383 601 3.40.50.300
af_O53645_932_1184_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9513 328 602 3.40.50.300
af_Q19015_398_655_1.20.1560.10 Mainly Alpha;Up-down Bundle;ABC transporter transmembrane region fold;ABC transporter type 1, transmembrane domain 0.9483 393 612 1.20.1560.10
af_Q9R1S7_1246_1490_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9445 336 594 3.40.50.300
af_Q19015_1020_1270_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9429 383 601 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A3D3GPI7-F1-model_v4 ABC transporter domain-containing protein 0.9811 392 606 GO:0005524
GO:0016887
GO:0034040
AF-A0A847KX24-F1-model_v4 deleted 0.978 392 606
AF-A0A0G2AFU2-F1-model_v4 Peptide-transporting atpase 0.9777 396 607 GO:0005524
GO:0016887
GO:0034040
AF-A0A7V9FMT5-F1-model_v4 ATP-binding cassette domain-containing protein 0.975 381 603 GO:0005524
GO:0016887
GO:0034040
AF-A0A7C7CQ99-F1-model_v4 ATP-binding cassette domain-containing protein 0.9711 381 599 GO:0005524
GO:0012505
GO:0016887
GO:0042626

Map