F365864

General Info

Members Datasets Scaffolds Average Seq Length
255 179 510 352

Family's Representative Sequence

Representative Sequence 3300037853|Ga0436364_0121299|Ga0436364_0121299_33616_34842
Length 401
Sequence MQPVEIAHRENRAAAMVRGRAGMSDDADHGGAGRSLERRMRENTPSRGRKDTVSRRLGSDPGSQVENEAAPLREAWYYAVPSARLRVGRMLAKTMLGEPILLGRDGAGNVFALRDICPHRGMPLSAGHFDGCEVECCYHGWRFDMAGRCTAIPSLVAGQNVDVGRIRAVAYRVWEAQGNIWVFFGDDPAAAAGIPEIEGFADHAPRLVETVRFAAAIDHAVVGLMDPAHGPFVHRAWWWRSRRSAHDKAKDFAPSPFGFTMNRHAPSANSRAYRLLGGVPQTEITFRLPGVRIEQIRAGRHLVCNLTALTPIDARTTEINHCIYWTAPWLSLLKPAFLHQDRDIMERQQLGLRHDPALMLINDADTQARWYYRLKREYRRARAEGRPFENPVKPRTLRWRS

Samples

Sample ID Description Type Environment
1 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
5 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
19 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
20 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
21 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
22 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
23 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
24 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
25 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
26 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
27 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
28 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
29 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
30 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
31 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
32 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
33 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
34 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
35 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
36 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
37 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
38 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
39 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
40 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
41 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
42 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
43 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
44 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
45 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
46 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
47 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
49 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
50 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
51 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
52 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
53 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
54 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
56 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
57 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
58 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
60 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
61 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
62 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
63 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
64 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
65 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
66 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
67 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
68 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
69 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
70 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
71 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
72 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
73 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
74 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
75 3300015684 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.2_F02 Metagenome Unclassified
76 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
77 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
102 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
104 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
105 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
106 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
107 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
108 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
109 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
110 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
111 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
112 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
113 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
114 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
115 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
116 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
117 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
118 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
119 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
120 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
121 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
122 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
123 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
124 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
125 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
126 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
127 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
128 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
129 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
130 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
131 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
132 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
133 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
134 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
135 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
136 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
137 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
138 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
139 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
140 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
141 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
142 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
143 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
144 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
145 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
146 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
147 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
148 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
157 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
158 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
159 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
160 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
162 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
163 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
164 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
165 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
166 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
167 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
168 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
169 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
170 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
171 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
172 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
173 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
174 2617270889 Nostoc punctiforme PCC 73102 Isolate Unclassified
175 2886627955 Nostoc sp. PA-18-2419 JC1668 Isolate Unclassified
176 2913844669 Nostocales cyanobacterium LEGE 12452 Isolate Unclassified
177 2913912277 Desmonostoc muscorum LEGE 12446 Isolate Unclassified
178 2913939268 Nostoc sp. LEGE 12447 Isolate Unclassified
179 642555144 Nostoc punctiforme PCC 73102 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.86
Metatranscriptomes 0.78
Isolates 2.35

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.18
Nodule 0
Rhizoplane 5.1
Rhizosphere 85.49
Stem 0
Stem Tuber 0
Unclassified 3.92

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436364_0121299 3300037853 Bacteria 57560
2 SwRhRL2b_contig_482826 2162886007 Bacteria 127325
3 rootL2_10328754 3300003322 Bacteria 2102
4 JGI25405J52794_10005374 3300003911 Bacteria 2307
5 Ga0065704_10070147 3300005289 Bacteria 265283
6 Ga0065707_10181050 3300005295 Unclassified 1418
7 Ga0070658_10265705 3300005327 Bacteria 1458
8 Ga0070690_100003336 3300005330 Bacteria 8755
9 Ga0068869_100012968 3300005334 Bacteria 5526
10 Ga0068868_100021534 3300005338 Unclassified 4855
11 Ga0070660_100009059 3300005339 Bacteria 6985
12 Ga0070689_100067406 3300005340 Bacteria 2790
13 Ga0070687_100006218 3300005343 Bacteria 4884
14 Ga0070661_100016927 3300005344 Bacteria 5162
15 Ga0070661_100149457 3300005344 Unclassified 1765
16 Ga0070673_100021886 3300005364 Bacteria 4645
17 Ga0070688_100000302 3300005365 Bacteria 25180
18 Ga0070659_100046823 3300005366 Bacteria 3390
19 Ga0070714_100002590 3300005435 Bacteria 13324
20 Ga0070714_100021051 3300005435 Bacteria 5332
21 Ga0070714_100034144 3300005435 Bacteria 4258
22 Ga0070714_100090528 3300005435 Bacteria 2680
23 Ga0070710_10094378 3300005437 Bacteria 1770
24 Ga0070701_10000286 3300005438 Bacteria 16535
25 Ga0070711_100014708 3300005439 Bacteria 4937
26 Ga0070700_100000989 3300005441 Bacteria 14024
27 Ga0070708_100106278 3300005445 Bacteria 2576
28 Ga0070708_100344069 3300005445 Bacteria 1405
29 Ga0070681_10042014 3300005458 Bacteria 4583
30 Ga0070681_10086229 3300005458 Bacteria 3093
31 Ga0070681_10134169 3300005458 Bacteria 2406
32 Ga0070681_10180876 3300005458 Bacteria 2030
33 Ga0068867_100008811 3300005459 Bacteria 7123
34 Ga0068867_100056808 3300005459 Bacteria 2897
35 Ga0070706_100010291 3300005467 Bacteria 8690
36 Ga0070706_100303908 3300005467 Bacteria 1488
37 Ga0070707_100000688 3300005468 Bacteria 33517
38 Ga0070707_100004459 3300005468 Bacteria 13109
39 Ga0070707_100102908 3300005468 Bacteria 2767
40 Ga0070698_100210607 3300005471 Bacteria 1878
41 Ga0070699_100054858 3300005518 Bacteria 3451
42 Ga0070679_100098268 3300005530 Bacteria 2915
43 Ga0070679_100112926 3300005530 Bacteria 2702
44 Ga0070679_100356798 3300005530 Bacteria 1409
45 Ga0070697_100002806 3300005536 Bacteria 13414
46 Ga0070697_100044570 3300005536 Bacteria 3593
47 Ga0068853_100023400 3300005539 Bacteria 5171
48 Ga0070672_100014463 3300005543 Bacteria 5594
49 Ga0070696_100060140 3300005546 Bacteria 2656
50 Ga0070704_100230306 3300005549 Bacteria 1511
51 Ga0068855_100310188 3300005563 Bacteria 1746
52 Ga0070664_100000672 3300005564 Bacteria 26116
53 Ga0070664_100216973 3300005564 Bacteria 1711
54 Ga0068859_100009725 3300005617 Bacteria 9711
55 Ga0068861_100140456 3300005719 Bacteria 1971
56 Ga0068863_100290715 3300005841 Bacteria 1584
57 Ga0068858_100005602 3300005842 Bacteria 12285
58 Ga0068858_100041471 3300005842 Unclassified 4267
59 Ga0081455_10001036 3300005937 Bacteria 35110
60 Ga0081538_10001895 3300005981 Bacteria 21006
61 Ga0081540_1010571 3300005983 Bacteria 6235
62 Ga0081540_1022087 3300005983 Bacteria 3765
63 Ga0081539_10010154 3300005985 Bacteria 7718
64 Ga0070717_10135779 3300006028 Bacteria 2118
65 Ga0070717_10162328 3300006028 Bacteria 1939
66 Ga0070717_10283378 3300006028 Bacteria 1470
67 Ga0097621_100219140 3300006237 Bacteria 1657
68 Ga0068871_100073041 3300006358 Bacteria 2827
69 Ga0075428_100017114 3300006844 Bacteria 8008
70 Ga0075428_100299666 3300006844 Bacteria 1728
71 Ga0075433_10103661 3300006852 Bacteria 2520
72 Ga0075429_100159473 3300006880 Bacteria 1975
73 Ga0075429_100206881 3300006880 Bacteria 1719
74 Ga0068865_100018208 3300006881 Bacteria 4530
75 Ga0075436_100003886 3300006914 Bacteria 10237
76 Ga0075436_100095183 3300006914 Bacteria 2072
77 Ga0075436_100113450 3300006914 Bacteria 1892
78 Ga0097620_100009725 3300006931 Bacteria 9711
79 Ga0075435_100197375 3300007076 Bacteria 1704
80 Ga0099795_10013856 3300007788 Bacteria 2485
81 Ga0105240_10000001 3300009093 Bacteria 2887840
82 Ga0111539_10011568 3300009094 Bacteria 11075
83 Ga0105245_10115364 3300009098 Bacteria 2503
84 Ga0105245_10206065 3300009098 Bacteria 1891
85 Ga0114129_10002222 3300009147 Bacteria 26769
86 Ga0105242_10193273 3300009176 Bacteria 1803
87 Ga0105248_10002232 3300009177 Bacteria 21407
88 Ga0105237_10028946 3300009545 Bacteria 5635
89 Ga0105237_10053001 3300009545 Bacteria 4070
90 Ga0105238_10041203 3300009551 Bacteria 4678
91 Ga0105239_10049595 3300010375 Bacteria 4603
92 Ga0157371_10163174 3300013102 Bacteria 1591
93 Ga0157370_10124659 3300013104 Bacteria 2405
94 Ga0157369_10006420 3300013105 Bacteria 13629
95 Ga0157369_10008866 3300013105 Bacteria 11520
96 Ga0157369_10060277 3300013105 Bacteria 4092
97 Ga0157369_10161145 3300013105 Bacteria 2368
98 Ga0163162_10011821 3300013306 Bacteria 8516
99 Ga0163162_10113132 3300013306 Bacteria 2813
100 Ga0157372_10236503 3300013307 Bacteria 2119
101 Ga0163163_10007467 3300014325 Bacteria 9647
102 Ga0157380_10013577 3300014326 Bacteria 5945
103 Ga0182008_10104341 3300014497 Bacteria 1402
104 Ga0157379_10206741 3300014968 Bacteria 1776
105 Ga0157379_10303576 3300014968 Bacteria 1455
106 Ga0183365_10001 3300015684 Bacteria 2090444
107 Ga0213875_10000573 3300021388 Bacteria 30029
108 Ga0213875_10001977 3300021388 Bacteria 12673
109 Ga0207647_10025190 3300025904 Bacteria 3914
110 Ga0207684_10002352 3300025910 Bacteria 19133
111 Ga0207684_10079756 3300025910 Bacteria 2785
112 Ga0207684_10268486 3300025910 Bacteria 1472
113 Ga0207707_10015182 3300025912 Bacteria 6707
114 Ga0207707_10119024 3300025912 Bacteria 2308
115 Ga0207707_10198327 3300025912 Bacteria 1750
116 Ga0207695_10000001 3300025913 Bacteria 2888630
117 Ga0207671_10070650 3300025914 Bacteria 2603
118 Ga0207671_10176703 3300025914 Bacteria 1660
119 Ga0207693_10010690 3300025915 Bacteria 7449
120 Ga0207660_10011935 3300025917 Bacteria 5671
121 Ga0207662_10003026 3300025918 Bacteria 8576
122 Ga0207657_10139444 3300025919 Bacteria 1982
123 Ga0207649_10022918 3300025920 Bacteria 3610
124 Ga0207652_10074702 3300025921 Bacteria 2952
125 Ga0207652_10153788 3300025921 Bacteria 2060
126 Ga0207646_10006547 3300025922 Bacteria 12025
127 Ga0207700_10056059 3300025928 Bacteria 2965
128 Ga0207700_10311772 3300025928 Bacteria 1361
129 Ga0207664_10158475 3300025929 Bacteria 1929
130 Ga0207704_10177783 3300025938 Bacteria 1534
131 Ga0207665_10022608 3300025939 Bacteria 4138
132 Ga0207665_10104120 3300025939 Bacteria 1986
133 Ga0207691_10014622 3300025940 Bacteria 7481
134 Ga0207689_10000769 3300025942 Bacteria 30802
135 Ga0207679_10005021 3300025945 Bacteria 8265
136 Ga0207667_10291722 3300025949 Bacteria 1666
137 Ga0207703_10010469 3300026035 Bacteria 7250
138 Ga0207703_10016464 3300026035 Bacteria 5765
139 Ga0207639_10068367 3300026041 Bacteria 2768
140 Ga0207641_10259848 3300026088 Bacteria 1625
141 Ga0207648_10033112 3300026089 Bacteria 4559
142 Ga0207428_10023756 3300027907 Bacteria 5150
143 Ga0268264_10026857 3300028381 Bacteria 4704
144 Ga0265338_10001088 3300028800 Bacteria 45144
145 Ga0265770_1003604 3300030878 Unclassified 2106
146 Ga0265760_10000036 3300031090 Bacteria 45130
147 Ga0265330_10038067 3300031235 Bacteria 2139
148 Ga0265327_10000496 3300031251 Bacteria 68506
149 Ga0265314_10006097 3300031711 Bacteria 10713
150 Ga0307414_10153843 3300032004 Bacteria 1818
151 Ga0373926_0086778 3300035083 Bacteria 1161
152 Ga0373923_0115476 3300035111 Bacteria 1195
153 Ga0373936_0071010 3300035113 Unclassified 1435
154 Ga0373956_0122648 3300035119 Bacteria 1214
155 Ga0373955_0014795 3300035172 Bacteria 3806
156 Ga0373955_0164243 3300035172 Bacteria 1312
157 Ga0373927_0057718 3300035695 Bacteria 2510
158 Ga0373947_0027556 3300035725 Bacteria 3326
159 Ga0373947_0062330 3300035725 Bacteria 2269
160 Ga0373937_0007528 3300036401 Bacteria 9427
161 Ga0373937_0018361 3300036401 Bacteria 6245
162 Ga0373937_0045740 3300036401 Bacteria 4000
163 Ga0373925_0010516 3300037068 Bacteria 6713
164 Ga0373925_0052822 3300037068 Bacteria 3037
165 Ga0395899_0001176 3300037312 Bacteria 23086
166 Ga0395900_0001377 3300037418 Bacteria 29258
167 Ga0395900_0137347 3300037418 Bacteria 2505
168 Ga0395898_0003355 3300037466 Bacteria 17968
169 Ga0395898_0073702 3300037466 Bacteria 3298
170 Ga0395898_0480761 3300037466 Bacteria 1182
171 Ga0395905_0000093 3300037471 Bacteria 149291
172 Ga0395905_0041732 3300037471 Bacteria 4306
173 Ga0436364_0247428 3300037853 Bacteria 7296
174 Ga0436364_0356524 3300037853 Unclassified 1197
175 Ga0436364_1532808 3300037853 Bacteria 13120
176 Ga0395901_0001507 3300038443 Bacteria 24210
177 Ga0436365_1408948 3300039437 Bacteria 5675
178 Ga0436365_1581374 3300039437 Bacteria 1924
179 Ga0436361_0465153 3300039447 Bacteria 16350
180 Ga0436362_1140698 3300039453 Bacteria 1880
181 Ga0439440_0001775 3300042993 Bacteria 3986
182 Ga0453683_0037816 3300044673 Bacteria 3035
183 Ga0453683_0109529 3300044673 Bacteria 1736
184 Ga0451576_0019013 3300045051 Bacteria 7507
185 Ga0451576_0055557 3300045051 Bacteria 4142
186 Ga0451576_0147245 3300045051 Bacteria 2455
187 Ga0451576_0370252 3300045051 Bacteria 1501
188 Ga0495580_0119852 3300046472 Bacteria 1827
189 Ga0495662_0092626 3300046476 Bacteria 1474
190 Ga0495618_0174581 3300046514 Bacteria 1367
191 Ga0495645_0110561 3300046543 Bacteria 1945
192 Ga0495645_0127645 3300046543 Bacteria 1786
193 Ga0495635_0042934 3300046663 Bacteria 3121
194 Ga0495680_0153323 3300047322 Bacteria 1678
195 Ga0496101_0282264 3300048904 Bacteria 1298
196 Ga0496104_0437719 3300048907 Unclassified 1219
197 Ga0496108_0189259 3300048911 Bacteria 1783
198 Ga0496109_0026667 3300048912 Bacteria 5155
199 Ga0496110_0000984 3300048913 Bacteria 19970
200 Ga0496110_0023796 3300048913 Bacteria 5212
201 Ga0496110_0256390 3300048913 Bacteria 1592
202 Ga0496112_0026408 3300048915 Bacteria 5587
203 Ga0496112_0212911 3300048915 Bacteria 1889
204 Ga0496113_0113878 3300048916 Bacteria 2108
205 Ga0496113_0170962 3300048916 Bacteria 1721
206 Ga0496113_0274798 3300048916 Unclassified 1347
207 Ga0496115_0201408 3300048918 Bacteria 1644
208 Ga0496120_0061808 3300048923 Bacteria 2089
209 Ga0496124_0000001 3300048927 Bacteria 1747840
210 Ga0496125_0071163 3300048928 Bacteria 2719
211 Ga0496126_0011190 3300048929 Bacteria 9311
212 Ga0496126_0013221 3300048929 Bacteria 8417
213 Ga0501031_0000387 3300049568 Bacteria 25827
214 Ga0501031_0020237 3300049568 Bacteria 4338
215 Ga0501036_0004578 3300049572 Bacteria 11168
216 Ga0501036_0035185 3300049572 Bacteria 4238
217 Ga0501039_0000166 3300049575 Bacteria 45779
218 Ga0501039_0048332 3300049575 Bacteria 3289
219 Ga0501041_0002040 3300049577 Bacteria 11365
220 Ga0501042_0006988 3300049578 Bacteria 7368
221 Ga0501042_0065742 3300049578 Bacteria 2591
222 Ga0501042_0166290 3300049578 Unclassified 1592
223 Ga0501046_0000649 3300049580 Bacteria 33919
224 Ga0501046_0027504 3300049580 Bacteria 4638
225 Ga0501047_0010834 3300049581 Bacteria 8618
226 Ga0501048_0005172 3300049582 Bacteria 9945
227 Ga0501068_0029282 3300049584 Bacteria 3260
228 Ga0501072_0290302 3300049588 Bacteria 1300
229 Ga0501076_0142680 3300049592 Bacteria 1946
230 Ga0501079_0069797 3300049741 Bacteria 2713
231 Ga0501035_0024561 3300049822 Bacteria 5527
232 Ga0501044_0140501 3300049823 Bacteria 2404
233 nmdc:mga05p37_28914_c1 3300050507 Bacteria 6762
234 nmdc:mga05p37_36572_c1 3300050507 Bacteria 6022
235 nmdc:mga0qj67_99954_c1 3300050509 Bacteria 2338
236 nmdc:mga06r32_136533_c1 3300050510 Bacteria 2427
237 nmdc:mga06r32_219385_c1 3300050510 Bacteria 1890
238 nmdc:mga08y16_8370_c1 3300050511 Bacteria 10821
239 nmdc:mga0n895_267640_c1 3300050512 Bacteria 1734
240 nmdc:mga08x19_123958_c1 3300050514 Bacteria 1734
241 nmdc:mga08x19_26082_c1 3300050514 Bacteria 3645
242 nmdc:mga08x19_5276_c1 3300050514 Bacteria 7645
243 nmdc:mga0a205_178032_c1 3300050515 Bacteria 2021
244 nmdc:mga0a205_525435_c1 3300050515 Bacteria 1040
245 Ga0500635_0000310 3300053080 Bacteria 17133
246 Ga0495595_0004767 3300053084 Bacteria 5460
247 Ga0495619_0014219 3300053085 Bacteria 5027
248 Ga0500562_000217 3300053108 Bacteria 15571
249 Ga0500608_001258 3300053122 Bacteria 9029
250 2617914761 2617270889 Bacteria 9064343
251 2886629719 2886627955 Bacteria 7618130
252 2913848446 2913844669 Bacteria 8381711
253 2913914047 2913912277 Bacteria 9037797
254 2913943479 2913939268 Bacteria 8559644
255 642599887 642555144 Bacteria 9059191
256 Ga0436364_0121299
257 SwRhRL2b_contig_482826
258 rootL2_10328754
259 JGI25405J52794_10005374
260 Ga0065704_10070147
261 Ga0065707_10181050
262 Ga0070658_10265705
263 Ga0070690_100003336
264 Ga0068869_100012968
265 Ga0068868_100021534
266 Ga0070660_100009059
267 Ga0070689_100067406
268 Ga0070687_100006218
269 Ga0070661_100016927
270 Ga0070661_100149457
271 Ga0070673_100021886
272 Ga0070688_100000302
273 Ga0070659_100046823
274 Ga0070714_100002590
275 Ga0070714_100021051
276 Ga0070714_100034144
277 Ga0070714_100090528
278 Ga0070710_10094378
279 Ga0070701_10000286
280 Ga0070711_100014708
281 Ga0070700_100000989
282 Ga0070708_100106278
283 Ga0070708_100344069
284 Ga0070681_10042014
285 Ga0070681_10086229
286 Ga0070681_10134169
287 Ga0070681_10180876
288 Ga0068867_100008811
289 Ga0068867_100056808
290 Ga0070706_100010291
291 Ga0070706_100303908
292 Ga0070707_100000688
293 Ga0070707_100004459
294 Ga0070707_100102908
295 Ga0070698_100210607
296 Ga0070699_100054858
297 Ga0070679_100098268
298 Ga0070679_100112926
299 Ga0070679_100356798
300 Ga0070697_100002806
301 Ga0070697_100044570
302 Ga0068853_100023400
303 Ga0070672_100014463
304 Ga0070696_100060140
305 Ga0070704_100230306
306 Ga0068855_100310188
307 Ga0070664_100000672
308 Ga0070664_100216973
309 Ga0068859_100009725
310 Ga0068861_100140456
311 Ga0068863_100290715
312 Ga0068858_100005602
313 Ga0068858_100041471
314 Ga0081455_10001036
315 Ga0081538_10001895
316 Ga0081540_1010571
317 Ga0081540_1022087
318 Ga0081539_10010154
319 Ga0070717_10135779
320 Ga0070717_10162328
321 Ga0070717_10283378
322 Ga0097621_100219140
323 Ga0068871_100073041
324 Ga0075428_100017114
325 Ga0075428_100299666
326 Ga0075433_10103661
327 Ga0075429_100159473
328 Ga0075429_100206881
329 Ga0068865_100018208
330 Ga0075436_100003886
331 Ga0075436_100095183
332 Ga0075436_100113450
333 Ga0097620_100009725
334 Ga0075435_100197375
335 Ga0099795_10013856
336 Ga0105240_10000001
337 Ga0111539_10011568
338 Ga0105245_10115364
339 Ga0105245_10206065
340 Ga0114129_10002222
341 Ga0105242_10193273
342 Ga0105248_10002232
343 Ga0105237_10028946
344 Ga0105237_10053001
345 Ga0105238_10041203
346 Ga0105239_10049595
347 Ga0157371_10163174
348 Ga0157370_10124659
349 Ga0157369_10006420
350 Ga0157369_10008866
351 Ga0157369_10060277
352 Ga0157369_10161145
353 Ga0163162_10011821
354 Ga0163162_10113132
355 Ga0157372_10236503
356 Ga0163163_10007467
357 Ga0157380_10013577
358 Ga0182008_10104341
359 Ga0157379_10206741
360 Ga0157379_10303576
361 Ga0183365_10001
362 Ga0213875_10000573
363 Ga0213875_10001977
364 Ga0207647_10025190
365 Ga0207684_10002352
366 Ga0207684_10079756
367 Ga0207684_10268486
368 Ga0207707_10015182
369 Ga0207707_10119024
370 Ga0207707_10198327
371 Ga0207695_10000001
372 Ga0207671_10070650
373 Ga0207671_10176703
374 Ga0207693_10010690
375 Ga0207660_10011935
376 Ga0207662_10003026
377 Ga0207657_10139444
378 Ga0207649_10022918
379 Ga0207652_10074702
380 Ga0207652_10153788
381 Ga0207646_10006547
382 Ga0207700_10056059
383 Ga0207700_10311772
384 Ga0207664_10158475
385 Ga0207704_10177783
386 Ga0207665_10022608
387 Ga0207665_10104120
388 Ga0207691_10014622
389 Ga0207689_10000769
390 Ga0207679_10005021
391 Ga0207667_10291722
392 Ga0207703_10010469
393 Ga0207703_10016464
394 Ga0207639_10068367
395 Ga0207641_10259848
396 Ga0207648_10033112
397 Ga0207428_10023756
398 Ga0268264_10026857
399 Ga0265338_10001088
400 Ga0265770_1003604
401 Ga0265760_10000036
402 Ga0265330_10038067
403 Ga0265327_10000496
404 Ga0265314_10006097
405 Ga0307414_10153843
406 Ga0373926_0086778
407 Ga0373923_0115476
408 Ga0373936_0071010
409 Ga0373956_0122648
410 Ga0373955_0014795
411 Ga0373955_0164243
412 Ga0373927_0057718
413 Ga0373947_0027556
414 Ga0373947_0062330
415 Ga0373937_0007528
416 Ga0373937_0018361
417 Ga0373937_0045740
418 Ga0373925_0010516
419 Ga0373925_0052822
420 Ga0395899_0001176
421 Ga0395900_0001377
422 Ga0395900_0137347
423 Ga0395898_0003355
424 Ga0395898_0073702
425 Ga0395898_0480761
426 Ga0395905_0000093
427 Ga0395905_0041732
428 Ga0436364_0247428
429 Ga0436364_0356524
430 Ga0436364_1532808
431 Ga0395901_0001507
432 Ga0436365_1408948
433 Ga0436365_1581374
434 Ga0436361_0465153
435 Ga0436362_1140698
436 Ga0439440_0001775
437 Ga0453683_0037816
438 Ga0453683_0109529
439 Ga0451576_0019013
440 Ga0451576_0055557
441 Ga0451576_0147245
442 Ga0451576_0370252
443 Ga0495580_0119852
444 Ga0495662_0092626
445 Ga0495618_0174581
446 Ga0495645_0110561
447 Ga0495645_0127645
448 Ga0495635_0042934
449 Ga0495680_0153323
450 Ga0496101_0282264
451 Ga0496104_0437719
452 Ga0496108_0189259
453 Ga0496109_0026667
454 Ga0496110_0000984
455 Ga0496110_0023796
456 Ga0496110_0256390
457 Ga0496112_0026408
458 Ga0496112_0212911
459 Ga0496113_0113878
460 Ga0496113_0170962
461 Ga0496113_0274798
462 Ga0496115_0201408
463 Ga0496120_0061808
464 Ga0496124_0000001
465 Ga0496125_0071163
466 Ga0496126_0011190
467 Ga0496126_0013221
468 Ga0501031_0000387
469 Ga0501031_0020237
470 Ga0501036_0004578
471 Ga0501036_0035185
472 Ga0501039_0000166
473 Ga0501039_0048332
474 Ga0501041_0002040
475 Ga0501042_0006988
476 Ga0501042_0065742
477 Ga0501042_0166290
478 Ga0501046_0000649
479 Ga0501046_0027504
480 Ga0501047_0010834
481 Ga0501048_0005172
482 Ga0501068_0029282
483 Ga0501072_0290302
484 Ga0501076_0142680
485 Ga0501079_0069797
486 Ga0501035_0024561
487 Ga0501044_0140501
488 nmdc:mga05p37_28914_c1
489 nmdc:mga05p37_36572_c1
490 nmdc:mga0qj67_99954_c1
491 nmdc:mga06r32_136533_c1
492 nmdc:mga06r32_219385_c1
493 nmdc:mga08y16_8370_c1
494 nmdc:mga0n895_267640_c1
495 nmdc:mga08x19_123958_c1
496 nmdc:mga08x19_26082_c1
497 nmdc:mga08x19_5276_c1
498 nmdc:mga0a205_178032_c1
499 nmdc:mga0a205_525435_c1
500 Ga0500635_0000310
501 Ga0495595_0004767
502 Ga0495619_0014219
503 Ga0500562_000217
504 Ga0500608_001258
505 2617914761
506 2886629719
507 2913848446
508 2913914047
509 2913943479
510 642599887

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00355

Rieske

Rieske [2Fe-2S] domain

75

169

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
4emj-assembly1.cif.gz_B complex between the reductase and ferredoxin components of toluene dioxygenase 0.8856 9 120
5bok-assembly1.cif.gz_A ferredoxin component of 3-nitrotoluene dioxygenase from diaphorobacter sp. strain ds2 0.8741 10 116
2qpz-assembly1.cif.gz_A naphthalene 1,2-dioxygenase rieske ferredoxin 0.8731 10 117
7bui-assembly1.cif.gz_E complex of reduced oxygenase and oxidized ferredoxin in carbazole 1,9a- dioxygenase 0.8588 7 121
7szg-assembly1.cif.gz_A structure of the rieske non-heme iron oxygenase gxta pressurized with xenon 0.8483 8 322
ID Description Score Start End Superfamily
1z01A02 Mainly Beta;Single Sheet;N-terminal domain of TfIIb; 0.9572 8 120 2.20.25.680
af_Q2FVL9_1_103_2.102.10.10 Mainly Beta;3-layer Sandwich;Rieske Iron-sulfur Protein;Rieske [2Fe-2S] iron-sulphur domain 0.9137 10 116 2.102.10.10
3dqyA00 Mainly Beta;3-layer Sandwich;Rieske Iron-sulfur Protein;Rieske [2Fe-2S] iron-sulphur domain 0.9022 9 116 2.102.10.10
af_I1JZ61_209_331_2.102.10.10 Mainly Beta;3-layer Sandwich;Rieske Iron-sulfur Protein;Rieske [2Fe-2S] iron-sulphur domain 0.9004 8 134 2.102.10.10
1z01A02 Mainly Beta;Single Sheet;N-terminal domain of TfIIb; 0.897 8 120 2.20.25.680
ID Description Score Start End GO Terms
AF-A0A258X900-F1-model_v4 Rieske domain-containing protein 0.9715 25 346 GO:0016491
GO:0046872
GO:0051537
AF-A0A258X900-F1-model_v4 Rieske domain-containing protein 0.9655 25 346 GO:0016491
GO:0046872
GO:0051537
AF-A0A520HWE8-F1-model_v4 Rieske (2Fe-2S) protein 0.9583 6 116 GO:0046872
GO:0051537
AF-A3UF43-F1-model_v4 Rieske 2Fe-2S family protein 0.9536 5 346 GO:0016491
GO:0046872
GO:0051537
AF-A0A2D5FRZ6-F1-model_v4 deleted 0.9532 5 346

Map