F364815

General Info

Members Datasets Scaffolds Average Seq Length
254 167 241 353

Family's Representative Sequence

Representative Sequence 3300009094|Ga0111539_10290105|Ga0111539_102901052
Length 398
Sequence MSSEAANPHLNPLPGQGEADAKAPGEGRFADVSTIASDRSEMEPASASERESLLTASCPLPITNYKQIVLAHGSGGKLSHQLIEKMILPQFQNDLLEPLHDGAIFSLNGERVAFSTDSFVVSPIFFRGGDIGKLAVHGTVNDLAMCGARPVYLSAGFILEEGLPMEDFWRVVQSMHAAADDAGVKLVTGDTKVVDRGKADKIFINTSGIGVVPNEVNIHPGRAIAGDKIIISGPIAVHGIAIMSVREGLEFETEIASDTAPLHELVAAMVAARIDIHVLRDPTRGGVTSALTEIAQTAKIGMLLNESSIPIGEEVKGACEILGLDPLYVANEGKLLAIVAAEDADQVLRVLRSHSLGKDAAVIGEVINEHPGFVVMKTRVGGTRVVDMLSGEQLPRIC

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2506520007 Serratia plymuthica AS9 Isolate Rhizosphere
3 2506520008 Serratia plymuthica AS12 Isolate Unclassified
4 2508501071 Serratia proteamaculans S4 Isolate Rhizosphere
5 2654587920 Serratia plymuthica HRO-C48 Isolate Rhizosphere
6 2687453601 Serratia plymuthica 3Rp8 Isolate Unclassified
7 2706794495 Dickeya zeae ZJU1202 Isolate Unclassified
8 2740891818 Desulfofaba hansenii DSM 12642 Isolate Unclassified
9 2806310673 Serratia quinivorans NCTC 13189 Isolate Rhizosphere
10 2852103415 Edaphovirga cremea DSM 105170 Isolate Rhizosphere
11 2854601825 Dickeya dianthicola SS70 Isolate Stem Tuber
12 2869551831 Serratia inhibens PRI-2C Isolate Rhizosphere
13 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
14 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
15 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
16 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
17 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
18 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
19 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
20 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
21 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
22 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
23 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
24 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
25 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
26 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
27 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
28 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
29 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
30 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
31 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
32 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
33 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
34 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
35 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
36 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
37 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
38 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
39 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
40 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
41 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
42 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
43 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
44 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
45 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
46 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
47 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
48 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
49 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
50 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
51 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
52 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
53 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
54 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
55 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
56 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
57 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
58 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
59 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
60 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
61 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
62 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
63 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
64 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
65 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
66 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
67 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
68 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
69 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
70 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
71 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
72 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
73 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
74 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
75 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
76 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
77 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
78 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
79 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
80 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
81 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
82 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
83 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
108 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
112 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
113 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
114 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
115 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
116 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
117 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
118 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
119 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
120 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
121 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
122 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
123 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
124 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
125 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
126 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
127 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
128 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
129 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
130 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
131 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
132 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
133 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
134 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
135 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
136 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
137 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
138 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
139 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
140 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
141 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
142 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
143 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
144 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
145 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
146 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
147 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
148 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
149 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
150 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
151 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
152 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
153 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
154 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
155 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
156 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
157 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
158 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
159 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
160 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
161 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
162 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
163 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
164 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
165 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
166 640753048 Serratia proteamaculans 568 Isolate Endosphere
167 8023438354 Bacillus sp. BH2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 94.88
Metatranscriptomes 0
Isolates 5.12

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.57
Nodule 0.79
Rhizoplane 7.09
Rhizosphere 85.04
Stem 0
Stem Tuber 0.39
Unclassified 5.12

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1782030 2162886007 Bacteria 3918
2 JGI25151J46595_10002618 3300003187 Bacteria 10618
3 Ga0065704_10078032 3300005289 Bacteria 4546
4 Ga0065712_10004686 3300005290 Bacteria 3364
5 Ga0065715_10006834 3300005293 Bacteria 8808
6 Ga0065707_10023075 3300005295 Bacteria 1758
7 Ga0065707_10090729 3300005295 Bacteria 4077
8 Ga0070676_10060085 3300005328 Unclassified 2256
9 Ga0070690_100071931 3300005330 Unclassified 2248
10 Ga0070690_100133461 3300005330 Bacteria 1679
11 Ga0070670_100011600 3300005331 Bacteria 7531
12 Ga0068869_100012119 3300005334 Bacteria 5685
13 Ga0070666_10061993 3300005335 Bacteria 2532
14 Ga0070680_100017375 3300005336 Bacteria 5671
15 Ga0068868_100010755 3300005338 Bacteria 6634
16 Ga0068868_100063659 3300005338 Bacteria 2925
17 Ga0070660_100216241 3300005339 Bacteria 1557
18 Ga0070689_100110749 3300005340 Bacteria 2183
19 Ga0070689_100348829 3300005340 Bacteria 1241
20 Ga0070687_100127025 3300005343 Bacteria 1467
21 Ga0070661_100073811 3300005344 Bacteria 2512
22 Ga0070668_100019884 3300005347 Bacteria 5059
23 Ga0070669_100010587 3300005353 Bacteria 6548
24 Ga0070675_100135894 3300005354 Bacteria 2098
25 Ga0070671_100003665 3300005355 Bacteria 12036
26 Ga0070671_100006299 3300005355 Bacteria 9461
27 Ga0070671_100090680 3300005355 Unclassified 2559
28 Ga0070674_100044270 3300005356 Bacteria 3034
29 Ga0070673_100020796 3300005364 Unclassified 4740
30 Ga0070673_100029230 3300005364 Bacteria 4108
31 Ga0070673_100066304 3300005364 Bacteria 2883
32 Ga0070688_100063779 3300005365 Bacteria 2337
33 Ga0070667_100112315 3300005367 Bacteria 2364
34 Ga0070667_100248642 3300005367 Unclassified 1589
35 Ga0070709_10058009 3300005434 Bacteria 2454
36 Ga0070709_10167220 3300005434 Bacteria 1534
37 Ga0070714_100107009 3300005435 Unclassified 2471
38 Ga0070714_100247157 3300005435 Bacteria 1648
39 Ga0070713_100046913 3300005436 Bacteria 3548
40 Ga0070713_100085879 3300005436 Bacteria 2696
41 Ga0070713_100405020 3300005436 Bacteria 1274
42 Ga0070711_100025438 3300005439 Bacteria 3873
43 Ga0070711_100040841 3300005439 Bacteria 3131
44 Ga0070711_100073736 3300005439 Bacteria 2413
45 Ga0070705_100178501 3300005440 Bacteria 1436
46 Ga0070678_100041079 3300005456 Bacteria 3276
47 Ga0070678_100100484 3300005456 Bacteria 2241
48 Ga0070662_100029863 3300005457 Unclassified 3808
49 Ga0070662_100230637 3300005457 Bacteria 1481
50 Ga0070681_10060571 3300005458 Bacteria 3761
51 Ga0070681_10225810 3300005458 Unclassified 1787
52 Ga0070679_100009734 3300005530 Bacteria 9090
53 Ga0070672_100042483 3300005543 Bacteria 3500
54 Ga0070665_100007909 3300005548 Bacteria 10784
55 Ga0070665_100020038 3300005548 Bacteria 6715
56 Ga0070665_100114111 3300005548 Bacteria 2704
57 Ga0068856_100050763 3300005614 Bacteria 4089
58 Ga0068856_100093077 3300005614 Bacteria 3000
59 Ga0068864_100252912 3300005618 Bacteria 1636
60 Ga0068860_100041323 3300005843 Bacteria 4405
61 Ga0068860_100274788 3300005843 Unclassified 1645
62 Ga0081539_10000511 3300005985 Bacteria 80587
63 Ga0070717_10056434 3300006028 Bacteria 3245
64 Ga0070715_10033948 3300006163 Unclassified 2088
65 Ga0070712_100025118 3300006175 Bacteria 3956
66 Ga0070712_100229745 3300006175 Bacteria 1473
67 Ga0097621_100025364 3300006237 Bacteria 4637
68 Ga0097621_100052667 3300006237 Bacteria 3316
69 Ga0068871_100002482 3300006358 Bacteria 12582
70 Ga0068871_100036444 3300006358 Bacteria 3916
71 Ga0075431_100173569 3300006847 Bacteria 2214
72 Ga0075433_10059613 3300006852 Unclassified 3339
73 Ga0075434_100002454 3300006871 Bacteria 16325
74 Ga0079104_1001645 3300006946 Bacteria 14479
75 Ga0105251_10000002 3300009011 Bacteria 350843
76 Ga0111539_10143506 3300009094 Bacteria 2795
77 Ga0111539_10290105 3300009094 Bacteria 1904
78 Ga0105245_10054226 3300009098 Bacteria 3601
79 Ga0114129_10009152 3300009147 Bacteria 14117
80 Ga0114129_10365199 3300009147 Bacteria 1909
81 Ga0105241_10000002 3300009174 Bacteria 869480
82 Ga0105241_10011941 3300009174 Bacteria 6380
83 Ga0105242_10350485 3300009176 Bacteria 1363
84 Ga0105248_10003416 3300009177 Bacteria 17641
85 Ga0105248_10261314 3300009177 Bacteria 1949
86 Ga0105239_10215184 3300010375 Bacteria 2154
87 Ga0157373_10003901 3300013100 Bacteria 11265
88 Ga0157369_10021740 3300013105 Bacteria 7175
89 Ga0157374_10046920 3300013296 Bacteria 4003
90 Ga0157374_10181208 3300013296 Unclassified 2058
91 Ga0157374_10352601 3300013296 Bacteria 1462
92 Ga0157374_10509030 3300013296 Bacteria 1209
93 Ga0157378_10187488 3300013297 Bacteria 1949
94 Ga0163162_10008481 3300013306 Bacteria 10026
95 Ga0163162_10064307 3300013306 Bacteria 3713
96 Ga0163162_10268418 3300013306 Bacteria 1838
97 Ga0157372_10169614 3300013307 Bacteria 2525
98 Ga0157372_10179160 3300013307 Bacteria 2453
99 Ga0157375_10000790 3300013308 Bacteria 27678
100 Ga0157375_10038361 3300013308 Bacteria 4600
101 Ga0157375_10047740 3300013308 Bacteria 4183
102 Ga0163163_10379628 3300014325 Bacteria 1471
103 Ga0182008_10011169 3300014497 Bacteria 4789
104 Ga0157376_10026473 3300014969 Bacteria 4585
105 Ga0157376_10271594 3300014969 Bacteria 1593
106 Ga0163161_10000052 3300017792 Bacteria 119943
107 Ga0163161_10196706 3300017792 Bacteria 1552
108 Ga0213872_10055753 3300021361 Bacteria 1791
109 Ga0209130_1002322 3300025284 Bacteria 9704
110 Ga0209025_1002018 3300025294 Bacteria 23173
111 Ga0207697_10000750 3300025315 Bacteria 18378
112 Ga0207697_10000854 3300025315 Bacteria 17240
113 Ga0207697_10005355 3300025315 Bacteria 5973
114 Ga0207697_10007743 3300025315 Bacteria 4762
115 Ga0207697_10031603 3300025315 Bacteria 2166
116 Ga0207713_1000008 3300025735 Bacteria 553952
117 Ga0207688_10020566 3300025901 Bacteria 3604
118 Ga0207680_10059940 3300025903 Bacteria 2314
119 Ga0207699_10137679 3300025906 Bacteria 1601
120 Ga0207645_10009876 3300025907 Bacteria 6578
121 Ga0207654_10000005 3300025911 Bacteria 869492
122 Ga0207693_10030179 3300025915 Bacteria 4281
123 Ga0207693_10195783 3300025915 Bacteria 1590
124 Ga0207693_10204064 3300025915 Bacteria 1554
125 Ga0207663_10067052 3300025916 Bacteria 2300
126 Ga0207663_10080267 3300025916 Bacteria 2133
127 Ga0207662_10075780 3300025918 Bacteria 2044
128 Ga0207681_10016934 3300025923 Bacteria 4570
129 Ga0207681_10151368 3300025923 Bacteria 1739
130 Ga0207650_10104057 3300025925 Bacteria 2190
131 Ga0207650_10198558 3300025925 Bacteria 1606
132 Ga0207700_10014156 3300025928 Bacteria 5218
133 Ga0207664_10157321 3300025929 Unclassified 1935
134 Ga0207644_10093919 3300025931 Bacteria 2240
135 Ga0207706_10067458 3300025933 Bacteria 3147
136 Ga0207706_10220256 3300025933 Bacteria 1662
137 Ga0207686_10276380 3300025934 Bacteria 1238
138 Ga0207691_10024358 3300025940 Bacteria 5693
139 Ga0207689_10026791 3300025942 Bacteria 4827
140 Ga0207668_10045761 3300025972 Bacteria 2986
141 Ga0207658_10033770 3300025986 Bacteria 3650
142 Ga0207677_10032954 3300026023 Bacteria 3336
143 Ga0207677_10127075 3300026023 Bacteria 1928
144 Ga0207702_10039269 3300026078 Bacteria 3965
145 Ga0207683_10008202 3300026121 Bacteria 8938
146 Ga0207683_10059350 3300026121 Bacteria 3360
147 Ga0207683_10097605 3300026121 Bacteria 2621
148 Ga0209281_1000003 3300027111 Bacteria 1260089
149 Ga0209974_10021283 3300027876 Bacteria 2147
150 Ga0268266_10053000 3300028379 Bacteria 3484
151 Ga0268264_10042728 3300028381 Bacteria 3752
152 Ga0265323_10008445 3300028653 Bacteria 4246
153 Ga0265338_10003829 3300028800 Bacteria 20898
154 Ga0265325_10031651 3300031241 Bacteria 2829
155 Ga0265327_10020540 3300031251 Bacteria 4019
156 Ga0265316_10117024 3300031344 Bacteria 2015
157 Ga0307509_10000016 3300031507 Bacteria 266991
158 Ga0316575_10009016 3300031665 Bacteria 3647
159 Ga0316576_10000246 3300031727 Bacteria 23507
160 Ga0316578_10001064 3300031728 Bacteria 10617
161 Ga0307406_10027955 3300031901 Bacteria 3404
162 Ga0316583_10010954 3300032133 Bacteria 3266
163 Ga0373928_0000717 3300035084 Bacteria 6511
164 Ga0373943_0019077 3300035170 Bacteria 3154
165 Ga0316574_0009612 3300035398 Bacteria 5425
166 Ga0316574_0016439 3300035398 Bacteria 4313
167 Ga0316574_0219229 3300035398 Bacteria 1219
168 Ga0316582_0021487 3300036647 Bacteria 3815
169 Ga0316582_0040496 3300036647 Unclassified 2908
170 Ga0316582_0155491 3300036647 Bacteria 1547
171 Ga0316584_0014799 3300036712 Bacteria 5571
172 Ga0400490_23425 3300038726 Bacteria 3869
173 Ga0400488_53894 3300038741 Bacteria 15218
174 Ga0400483_054272 3300039062 Bacteria 2521
175 Ga0400489_02323 3300039093 Bacteria 3668
176 Ga0436360_0363454 3300039438 Bacteria 9311
177 Ga0436361_0188447 3300039447 Bacteria 14702
178 Ga0436361_0557413 3300039447 Bacteria 2674
179 Ga0436361_0628233 3300039447 Bacteria 3625
180 Ga0436361_1054788 3300039447 Bacteria 6569
181 Ga0436361_1112643 3300039447 Bacteria 1729
182 Ga0439466_0041575 3300041411 Bacteria 1533
183 Ga0451577_0003589 3300042876 Bacteria 17072
184 Ga0451577_0005930 3300042876 Bacteria 12318
185 Ga0451577_0043448 3300042876 Bacteria 4026
186 Ga0451577_0092751 3300042876 Bacteria 2696
187 Ga0451577_0118651 3300042876 Bacteria 2370
188 Ga0451577_0169447 3300042876 Bacteria 1968
189 Ga0451577_0255352 3300042876 Bacteria 1587
190 Ga0453683_0000012 3300044673 Bacteria 376341
191 Ga0453683_0000014 3300044673 Bacteria 364381
192 Ga0453683_0000677 3300044673 Bacteria 36228
193 Ga0453684_0000233 3300044712 Bacteria 240186
194 Ga0453684_0000551 3300044712 Bacteria 141549
195 Ga0453684_0007010 3300044712 Bacteria 21061
196 Ga0453684_0017234 3300044712 Bacteria 11214
197 Ga0453684_0075627 3300044712 Bacteria 4231
198 Ga0453684_0081128 3300044712 Bacteria 4047
199 Ga0453684_0086474 3300044712 Bacteria 3890
200 Ga0453684_0121865 3300044712 Bacteria 3147
201 Ga0451576_0000026 3300045051 Bacteria 427585
202 Ga0451576_0002477 3300045051 Bacteria 27441
203 Ga0451576_0002592 3300045051 Bacteria 26570
204 Ga0451576_0032821 3300045051 Bacteria 5521
205 Ga0495627_000017 3300046453 Bacteria 317280
206 Ga0495629_0078270 3300046459 Bacteria 2309
207 Ga0495651_0163770 3300046462 Bacteria 1591
208 Ga0495651_0172691 3300046462 Bacteria 1538
209 Ga0495653_0183653 3300046463 Bacteria 1433
210 Ga0495608_0092635 3300046511 Bacteria 1953
211 Ga0495630_0047515 3300046517 Bacteria 3210
212 Ga0495654_0000299 3300046530 Bacteria 44079
213 Ga0495586_0027837 3300046535 Bacteria 3024
214 Ga0495589_0000001 3300046794 Bacteria 888100
215 Ga0495684_0009211 3300047471 Bacteria 7621
216 Ga0496100_0217575 3300048903 Bacteria 1400
217 Ga0496101_0014894 3300048904 Bacteria 5234
218 Ga0496101_0044597 3300048904 Bacteria 3173
219 Ga0496104_0029562 3300048907 Bacteria 5084
220 Ga0496105_0164055 3300048908 Bacteria 1823
221 Ga0496105_0273816 3300048908 Unclassified 1363
222 Ga0496107_0014222 3300048910 Bacteria 5572
223 Ga0496108_0088845 3300048911 Unclassified 2626
224 Ga0496109_0144102 3300048912 Bacteria 2228
225 Ga0496112_0009506 3300048915 Bacteria 8767
226 Ga0496112_0016489 3300048915 Bacteria 6923
227 Ga0496112_0125268 3300048915 Bacteria 2540
228 Ga0496112_0132643 3300048915 Unclassified 2462
229 Ga0496113_0047854 3300048916 Unclassified 3180
230 Ga0496114_0145150 3300048917 Unclassified 2057
231 Ga0496114_0164930 3300048917 Bacteria 1928
232 Ga0496115_0006106 3300048918 Bacteria 8802
233 Ga0496115_0039350 3300048918 Bacteria 3755
234 Ga0496116_0000079 3300048919 Bacteria 226744
235 Ga0496125_0000142 3300048928 Bacteria 157997
236 Ga0496126_0002090 3300048929 Bacteria 27959
237 nmdc:mga05p37_71428_c1 3300050507 Bacteria 2564
238 nmdc:mga0n895_16885_c1 3300050512 Bacteria 6711
239 nmdc:mga0n895_47030_c1 3300050512 Bacteria 4217
240 nmdc:mga0rr50_110316_c1 3300050513 Bacteria 2176
241 nmdc:mga0a205_252356_c1 3300050515 Bacteria 1643

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300005334 Ga0068869_100012119 Ga0068869_1000121195 320
2 3300005343 Ga0070687_100127025 Ga0070687_1001270251 320
3 3300009176 Ga0105242_10350485 Ga0105242_103504852 320
4 3300025918 Ga0207662_10075780 Ga0207662_100757803 320
5 3300025934 Ga0207686_10276380 Ga0207686_102763801 320
6 3300025942 Ga0207689_10026791 Ga0207689_100267912 320
7 3300036712 Ga0316584_0014799 Ga0316584_0014799_1565_2530 320
8 3300006237 Ga0097621_100025364 Ga0097621_1000253642 321
9 3300042876 Ga0451577_0255352 Ga0451577_0255352_110_1123 324
10 3300009177 Ga0105248_10003416 Ga0105248_100034164 328
11 3300042876 Ga0451577_0003589 Ga0451577_0003589_474_1484 328
12 3300044673 Ga0453683_0000014 Ga0453683_0000014_289653_290663 328
13 3300044712 Ga0453684_0000551 Ga0453684_0000551_123270_124280 328
14 iso_pu_bacteria 2508501071 2508852469 328
15 iso_pu_bacteria 2806310673 2807177419 328
16 iso_pu_bacteria 640753048 640937978 328
17 3300039447 Ga0436361_0188447 Ga0436361_0188447_6280_7269 329
18 3300042876 Ga0451577_0043448 Ga0451577_0043448_751_1764 329
19 3300044673 Ga0453683_0000012 Ga0453683_0000012_72630_73643 329
20 3300044712 Ga0453684_0007010 Ga0453684_0007010_11252_12265 329
21 3300045051 Ga0451576_0000026 Ga0451576_0000026_48019_49032 329
22 iso_pu_bacteria 2506520007 2506580404 329
23 iso_pu_bacteria 2506520008 2506585543 329
24 iso_pu_bacteria 2654587920 2656277305 329
25 iso_pu_bacteria 2687453601 2689446944 329
26 iso_pu_bacteria 2869551831 2869556351 329
27 3300039093 Ga0400489_02323 Ga0400489_02323_1326_2324 331
28 3300044712 Ga0453684_0000233 Ga0453684_0000233_136034_137044 331
29 3300006946 Ga0079104_1001645 Ga0079104_100164510 332
30 3300009011 Ga0105251_10000002 Ga0105251_1000000292 332
31 3300009174 Ga0105241_10000002 Ga0105241_10000002276 332
32 3300013100 Ga0157373_10003901 Ga0157373_100039016 332
33 3300014497 Ga0182008_10011169 Ga0182008_100111697 332
34 3300025735 Ga0207713_1000008 Ga0207713_1000008254 332
35 3300025911 Ga0207654_10000005 Ga0207654_10000005275 332
36 3300027111 Ga0209281_1000003 Ga0209281_1000003438 332
37 3300041411 Ga0439466_0041575 Ga0439466_0041575_45_1058 332
38 3300046530 Ga0495654_0000299 Ga0495654_0000299_42165_43178 332
39 3300046794 Ga0495589_0000001 Ga0495589_0000001_644802_645815 332
40 iso_pu_bacteria 2740891818 2740992761 332
41 iso_pu_bacteria 2852103415 2852108069 332
42 3300017792 Ga0163161_10000052 Ga0163161_1000005232 333
43 3300046453 Ga0495627_000017 Ga0495627_000017_247372_248388 333
44 iso_pu_bacteria 2706794495 2707098809 333
45 iso_pu_bacteria 2854601825 2854606033 333
46 3300048919 Ga0496116_0000079 Ga0496116_0000079_155971_156981 334
47 3300048928 Ga0496125_0000142 Ga0496125_0000142_129323_130333 334
48 3300048929 Ga0496126_0002090 Ga0496126_0002090_4604_5614 334
49 3300031507 Ga0307509_10000016 Ga0307509_10000016163 335
50 3300042876 Ga0451577_0169447 Ga0451577_0169447_95_1105 335
51 3300031251 Ga0265327_10020540 Ga0265327_100205404 336
52 3300031727 Ga0316576_10000246 Ga0316576_100002467 336
53 3300031728 Ga0316578_10001064 Ga0316578_100010643 336
54 3300032133 Ga0316583_10010954 Ga0316583_100109543 336
55 3300035084 Ga0373928_0000717 Ga0373928_0000717_1394_2407 336
56 3300035398 Ga0316574_0009612 Ga0316574_0009612_2963_3976 336
57 3300035398 Ga0316574_0016439 Ga0316574_0016439_2616_3629 336
58 3300035398 Ga0316574_0219229 Ga0316574_0219229_55_1068 336
59 3300036647 Ga0316582_0040496 Ga0316582_0040496_1019_2035 336
60 3300036647 Ga0316582_0155491 Ga0316582_0155491_241_1254 336
61 3300038726 Ga0400490_23425 Ga0400490_23425_2457_3467 336
62 3300038741 Ga0400488_53894 Ga0400488_53894_747_1757 336
63 3300039447 Ga0436361_0557413 Ga0436361_0557413_1632_2642 336
64 3300042876 Ga0451577_0005930 Ga0451577_0005930_2785_3798 336
65 3300042876 Ga0451577_0118651 Ga0451577_0118651_359_1372 336
66 3300044673 Ga0453683_0000677 Ga0453683_0000677_2568_3581 336
67 3300044712 Ga0453684_0017234 Ga0453684_0017234_130_1143 336
68 3300044712 Ga0453684_0075627 Ga0453684_0075627_2634_3644 336
69 3300044712 Ga0453684_0081128 Ga0453684_0081128_591_1604 336
70 3300044712 Ga0453684_0086474 Ga0453684_0086474_2311_3321 336
71 3300045051 Ga0451576_0002477 Ga0451576_0002477_4351_5364 336
72 3300045051 Ga0451576_0002592 Ga0451576_0002592_11409_12422 336
73 3300045051 Ga0451576_0032821 Ga0451576_0032821_4458_5471 336
74 3300046459 Ga0495629_0078270 Ga0495629_0078270_535_1545 336
75 iso_pu_bacteria 8023438354 8023440006 336
76 3300036647 Ga0316582_0021487 Ga0316582_0021487_1248_2267 338
77 3300039062 Ga0400483_054272 Ga0400483_054272_282_1313 338
78 3300005440 Ga0070705_100178501 Ga0070705_1001785011 339
79 3300006175 Ga0070712_100229745 Ga0070712_1002297452 339
80 3300025915 Ga0207693_10195783 Ga0207693_101957832 339
81 3300003187 JGI25151J46595_10002618 JGI25151J46595_100026186 340
82 3300025284 Ga0209130_1002322 Ga0209130_10023229 340
83 3300025294 Ga0209025_1002018 Ga0209025_100201814 340
84 3300039447 Ga0436361_1112643 Ga0436361_1112643_365_1426 340
85 3300005843 Ga0068860_100041323 Ga0068860_1000413234 343
86 3300005843 Ga0068860_100274788 Ga0068860_1002747882 343
87 3300028381 Ga0268264_10042728 Ga0268264_100427284 343
88 3300005434 Ga0070709_10058009 Ga0070709_100580092 344
89 3300005436 Ga0070713_100046913 Ga0070713_1000469133 344
90 3300025928 Ga0207700_10014156 Ga0207700_100141563 344
91 3300039447 Ga0436361_1054788 Ga0436361_1054788_2059_3093 344
92 3300005330 Ga0070690_100071931 Ga0070690_1000719311 346
93 3300006847 Ga0075431_100173569 Ga0075431_1001735692 346
94 3300006852 Ga0075433_10059613 Ga0075433_100596133 346
95 3300006871 Ga0075434_100002454 Ga0075434_10000245415 346
96 3300009147 Ga0114129_10009152 Ga0114129_1000915210 346
97 3300013308 Ga0157375_10038361 Ga0157375_100383615 346
98 3300031901 Ga0307406_10027955 Ga0307406_100279553 346
99 3300050507 nmdc:mga05p37_71428_c1 nmdc:mga05p37_71428_c1_1252_2292 346
100 3300050512 nmdc:mga0n895_16885_c1 nmdc:mga0n895_16885_c1_2028_3068 346
101 3300050513 nmdc:mga0rr50_110316_c1 nmdc:mga0rr50_110316_c1_1102_2142 346
102 3300005339 Ga0070660_100216241 Ga0070660_1002162411 350
103 3300005458 Ga0070681_10225810 Ga0070681_102258102 350
104 3300031344 Ga0265316_10117024 Ga0265316_101170242 350
105 3300031665 Ga0316575_10009016 Ga0316575_100090164 350
106 3300035170 Ga0373943_0019077 Ga0373943_0019077_1525_2580 350
107 3300042876 Ga0451577_0092751 Ga0451577_0092751_1379_2434 350
108 3300044712 Ga0453684_0121865 Ga0453684_0121865_1877_2932 350
109 3300046463 Ga0495653_0183653 Ga0495653_0183653_24_1076 350
110 3300046511 Ga0495608_0092635 Ga0495608_0092635_748_1800 350
111 3300050512 nmdc:mga0n895_47030_c1 nmdc:mga0n895_47030_c1_1470_2522 350
112 3300005355 Ga0070671_100090680 Ga0070671_1000906801 351
113 3300005364 Ga0070673_100020796 Ga0070673_1000207965 351
114 3300005434 Ga0070709_10167220 Ga0070709_101672202 351
115 3300005436 Ga0070713_100405020 Ga0070713_1004050201 351
116 3300005439 Ga0070711_100025438 Ga0070711_1000254384 351
117 3300006028 Ga0070717_10056434 Ga0070717_100564342 351
118 3300006175 Ga0070712_100025118 Ga0070712_1000251184 351
119 3300025315 Ga0207697_10031603 Ga0207697_100316031 351
120 3300025906 Ga0207699_10137679 Ga0207699_101376791 351
121 3300025915 Ga0207693_10030179 Ga0207693_100301792 351
122 3300025916 Ga0207663_10080267 Ga0207663_100802671 351
123 3300048911 Ga0496108_0088845 Ga0496108_0088845_918_1973 351
124 3300048915 Ga0496112_0009506 Ga0496112_0009506_2282_3337 351
125 3300048916 Ga0496113_0047854 Ga0496113_0047854_1300_2355 351
126 3300021361 Ga0213872_10055753 Ga0213872_100557532 353
127 3300005331 Ga0070670_100011600 Ga0070670_1000116004 355
128 3300005338 Ga0068868_100010755 Ga0068868_1000107554 355
129 3300005353 Ga0070669_100010587 Ga0070669_1000105877 355
130 3300005355 Ga0070671_100003665 Ga0070671_1000036652 355
131 3300005439 Ga0070711_100040841 Ga0070711_1000408412 355
132 3300005548 Ga0070665_100020038 Ga0070665_1000200382 355
133 3300005985 Ga0081539_10000511 Ga0081539_1000051188 355
134 3300006237 Ga0097621_100052667 Ga0097621_1000526672 355
135 3300006358 Ga0068871_100002482 Ga0068871_1000024825 355
136 3300009147 Ga0114129_10365199 Ga0114129_103651992 355
137 3300013296 Ga0157374_10181208 Ga0157374_101812082 355
138 3300013297 Ga0157378_10187488 Ga0157378_101874882 355
139 3300013306 Ga0163162_10008481 Ga0163162_100084819 355
140 3300013308 Ga0157375_10000790 Ga0157375_1000079015 355
141 3300025916 Ga0207663_10067052 Ga0207663_100670522 355
142 3300025923 Ga0207681_10016934 Ga0207681_100169344 355
143 3300025925 Ga0207650_10104057 Ga0207650_101040572 355
144 3300026023 Ga0207677_10032954 Ga0207677_100329542 355
145 3300028800 Ga0265338_10003829 Ga0265338_1000382920 355
146 3300031241 Ga0265325_10031651 Ga0265325_100316513 355
147 3300046462 Ga0495651_0163770 Ga0495651_0163770_202_1281 355
148 3300048903 Ga0496100_0217575 Ga0496100_0217575_303_1382 355
149 3300048904 Ga0496101_0014894 Ga0496101_0014894_722_1801 355
150 3300048907 Ga0496104_0029562 Ga0496104_0029562_2919_3998 355
151 3300048915 Ga0496112_0016489 Ga0496112_0016489_4878_5957 355
152 3300048915 Ga0496112_0132643 Ga0496112_0132643_103_1182 355
153 3300048918 Ga0496115_0006106 Ga0496115_0006106_5066_6145 355
154 3300050515 nmdc:mga0a205_252356_c1 nmdc:mga0a205_252356_c1_305_1372 355
155 2162886007 SwRhRL2b_contig_1782030 SwRhRL2b_0729.00004130 357
156 3300005289 Ga0065704_10078032 Ga0065704_100780326 357
157 3300005290 Ga0065712_10004686 Ga0065712_100046863 357
158 3300005293 Ga0065715_10006834 Ga0065715_100068343 357
159 3300005295 Ga0065707_10023075 Ga0065707_100230752 357
160 3300005295 Ga0065707_10090729 Ga0065707_100907292 357
161 3300005328 Ga0070676_10060085 Ga0070676_100600852 357
162 3300005330 Ga0070690_100133461 Ga0070690_1001334612 357
163 3300005335 Ga0070666_10061993 Ga0070666_100619932 357
164 3300005336 Ga0070680_100017375 Ga0070680_1000173753 357
165 3300005338 Ga0068868_100063659 Ga0068868_1000636593 357
166 3300005340 Ga0070689_100110749 Ga0070689_1001107492 357
167 3300005340 Ga0070689_100348829 Ga0070689_1003488291 357
168 3300005344 Ga0070661_100073811 Ga0070661_1000738112 357
169 3300005347 Ga0070668_100019884 Ga0070668_1000198846 357
170 3300005354 Ga0070675_100135894 Ga0070675_1001358942 357
171 3300005355 Ga0070671_100006299 Ga0070671_1000062997 357
172 3300005356 Ga0070674_100044270 Ga0070674_1000442703 357
173 3300005364 Ga0070673_100029230 Ga0070673_1000292302 357
174 3300005364 Ga0070673_100066304 Ga0070673_1000663042 357
175 3300005365 Ga0070688_100063779 Ga0070688_1000637792 357
176 3300005367 Ga0070667_100112315 Ga0070667_1001123153 357
177 3300005367 Ga0070667_100248642 Ga0070667_1002486421 357
178 3300005435 Ga0070714_100107009 Ga0070714_1001070091 357
179 3300005435 Ga0070714_100247157 Ga0070714_1002471572 357
180 3300005436 Ga0070713_100085879 Ga0070713_1000858793 357
181 3300005439 Ga0070711_100073736 Ga0070711_1000737363 357
182 3300005456 Ga0070678_100041079 Ga0070678_1000410793 357
183 3300005456 Ga0070678_100100484 Ga0070678_1001004842 357
184 3300005457 Ga0070662_100029863 Ga0070662_1000298634 357
185 3300005457 Ga0070662_100230637 Ga0070662_1002306371 357
186 3300005458 Ga0070681_10060571 Ga0070681_100605712 357
187 3300005530 Ga0070679_100009734 Ga0070679_1000097342 357
188 3300005543 Ga0070672_100042483 Ga0070672_1000424833 357
189 3300005548 Ga0070665_100007909 Ga0070665_10000790910 357
190 3300005548 Ga0070665_100114111 Ga0070665_1001141113 357
191 3300005614 Ga0068856_100050763 Ga0068856_1000507632 357
192 3300005614 Ga0068856_100093077 Ga0068856_1000930772 357
193 3300005618 Ga0068864_100252912 Ga0068864_1002529122 357
194 3300006163 Ga0070715_10033948 Ga0070715_100339481 357
195 3300006358 Ga0068871_100036444 Ga0068871_1000364443 357
196 3300009094 Ga0111539_10143506 Ga0111539_101435062 357
197 3300009094 Ga0111539_10290105 Ga0111539_102901052 357
198 3300009098 Ga0105245_10054226 Ga0105245_100542263 357
199 3300009174 Ga0105241_10011941 Ga0105241_100119413 357
200 3300009177 Ga0105248_10261314 Ga0105248_102613142 357
201 3300010375 Ga0105239_10215184 Ga0105239_102151841 357
202 3300013105 Ga0157369_10021740 Ga0157369_100217403 357
203 3300013296 Ga0157374_10046920 Ga0157374_100469202 357
204 3300013296 Ga0157374_10352601 Ga0157374_103526012 357
205 3300013296 Ga0157374_10509030 Ga0157374_105090301 357
206 3300013306 Ga0163162_10064307 Ga0163162_100643072 357
207 3300013306 Ga0163162_10268418 Ga0163162_102684182 357
208 3300013307 Ga0157372_10169614 Ga0157372_101696142 357
209 3300013307 Ga0157372_10179160 Ga0157372_101791603 357
210 3300013308 Ga0157375_10047740 Ga0157375_100477406 357
211 3300014325 Ga0163163_10379628 Ga0163163_103796282 357
212 3300014969 Ga0157376_10026473 Ga0157376_100264733 357
213 3300014969 Ga0157376_10271594 Ga0157376_102715942 357
214 3300017792 Ga0163161_10196706 Ga0163161_101967062 357
215 3300025315 Ga0207697_10000750 Ga0207697_100007502 357
216 3300025315 Ga0207697_10000854 Ga0207697_1000085414 357
217 3300025315 Ga0207697_10005355 Ga0207697_100053556 357
218 3300025315 Ga0207697_10007743 Ga0207697_100077433 357
219 3300025901 Ga0207688_10020566 Ga0207688_100205661 357
220 3300025903 Ga0207680_10059940 Ga0207680_100599402 357
221 3300025907 Ga0207645_10009876 Ga0207645_100098766 357
222 3300025915 Ga0207693_10204064 Ga0207693_102040642 357
223 3300025923 Ga0207681_10151368 Ga0207681_101513682 357
224 3300025925 Ga0207650_10198558 Ga0207650_101985582 357
225 3300025929 Ga0207664_10157321 Ga0207664_101573213 357
226 3300025931 Ga0207644_10093919 Ga0207644_100939192 357
227 3300025933 Ga0207706_10067458 Ga0207706_100674583 357
228 3300025933 Ga0207706_10220256 Ga0207706_102202561 357
229 3300025940 Ga0207691_10024358 Ga0207691_100243586 357
230 3300025972 Ga0207668_10045761 Ga0207668_100457612 357
231 3300025986 Ga0207658_10033770 Ga0207658_100337703 357
232 3300026023 Ga0207677_10127075 Ga0207677_101270752 357
233 3300026078 Ga0207702_10039269 Ga0207702_100392693 357
234 3300026121 Ga0207683_10008202 Ga0207683_100082027 357
235 3300026121 Ga0207683_10059350 Ga0207683_100593503 357
236 3300026121 Ga0207683_10097605 Ga0207683_100976052 357
237 3300027876 Ga0209974_10021283 Ga0209974_100212832 357
238 3300028379 Ga0268266_10053000 Ga0268266_100530005 357
239 3300028653 Ga0265323_10008445 Ga0265323_100084452 357
240 3300039438 Ga0436360_0363454 Ga0436360_0363454_4805_5899 357
241 3300039447 Ga0436361_0628233 Ga0436361_0628233_776_1870 357
242 3300046462 Ga0495651_0172691 Ga0495651_0172691_47_1132 357
243 3300046517 Ga0495630_0047515 Ga0495630_0047515_549_1622 357
244 3300046535 Ga0495586_0027837 Ga0495586_0027837_1387_2460 357
245 3300047471 Ga0495684_0009211 Ga0495684_0009211_1606_2679 357
246 3300048904 Ga0496101_0044597 Ga0496101_0044597_875_1960 357
247 3300048908 Ga0496105_0164055 Ga0496105_0164055_204_1277 357
248 3300048908 Ga0496105_0273816 Ga0496105_0273816_141_1226 357
249 3300048910 Ga0496107_0014222 Ga0496107_0014222_940_2025 357
250 3300048912 Ga0496109_0144102 Ga0496109_0144102_623_1696 357
251 3300048915 Ga0496112_0125268 Ga0496112_0125268_564_1637 357
252 3300048917 Ga0496114_0145150 Ga0496114_0145150_485_1570 357
253 3300048917 Ga0496114_0164930 Ga0496114_0164930_732_1805 357
254 3300048918 Ga0496115_0039350 Ga0496115_0039350_676_1749 357

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00586

AIRS

AIR synthase related protein, N-terminal domain

99

212

0.96

PF02769

AIRS_C

AIR synthase related protein, C-terminal domain

225

377

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
2z1f-assembly1.cif.gz_A crystal structure of hype from thermococcus kodakaraensis (inward form) 0.9691 59 357
3vti-assembly1.cif.gz_C crystal structure of hype-hypf complex 0.9673 41 348
3vyt-assembly1.cif.gz_C crystal structure of the hypc-hypd-hype complex (form i inward) 0.9638 25 357
3vti-assembly1.cif.gz_C crystal structure of hype-hypf complex 0.958 41 348
3vyt-assembly1.cif.gz_C crystal structure of the hypc-hypd-hype complex (form i inward) 0.9526 25 357
ID Description Score Start End Superfamily
2z1fA01 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;PurM-like, N-terminal domain 0.9771 61 171 3.30.1330.10
3wjpA02 Alpha Beta;Alpha-Beta Complex;Phosphoribosyl-aminoimidazole Synthetase; Chain A, domain 2;PurM-like C-terminal domain 0.9681 179 355 3.90.650.10
3vtiD02 Alpha Beta;Alpha-Beta Complex;Phosphoribosyl-aminoimidazole Synthetase; Chain A, domain 2;PurM-like C-terminal domain 0.9673 178 348 3.90.650.10
2z1tA02 Alpha Beta;Alpha-Beta Complex;Phosphoribosyl-aminoimidazole Synthetase; Chain A, domain 2;PurM-like C-terminal domain 0.9671 178 357 3.90.650.10
2i6rA02 Alpha Beta;Alpha-Beta Complex;Phosphoribosyl-aminoimidazole Synthetase; Chain A, domain 2;PurM-like C-terminal domain 0.9594 179 357 3.90.650.10
ID Description Score Start End GO Terms
AF-X1J2W9-F1-model_v4 PurM-like C-terminal domain-containing protein 0.9911 184 357 GO:0051604
AF-A0A3N5YXR0-F1-model_v4 Hydrogenase expression/formation protein HypE 0.9893 176 357 GO:0051604
AF-X1IZ93-F1-model_v4 Hydrogenase expression/formation protein HypE 0.989 106 258 GO:0051604
AF-A0A2M7P649-F1-model_v4 Hydrogenase expression/formation protein HypE 0.988 70 357 GO:0051604
AF-X1MCR4-F1-model_v4 Hydrogenase expression/formation protein HypE 0.9874 72 357 GO:0051604

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pLDDT pTM Quality
90.92 0.89 High
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Predicted Structure (AlphaFold2)

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