F364297

General Info

Members Datasets Scaffolds Average Seq Length
253 186 248 152

Family's Representative Sequence

Representative Sequence 3300045049|Ga0466959_0042202|Ga0466959_0042202_1611_2111
Length 166
Sequence MSAAQLMERPMAEDPENTLILTLDTGPVTIRLRPDLAPNHVARIKELAREGFYDGIVFHRVIPGFMAQGGDPQGQGYGGSGKKLKAEFNEAPHVRGTCSMARSQNPDSADSQFFICFADARFLDRQYTVWGEVTEGMENVDALPKGEPPREPGKIVTMRVAADVEA

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2643221560 Sphingopyxis sp. Root1497 Isolate Unclassified
3 2643221588 Altererythrobacter sp. Root672 Isolate Unclassified
4 2643221622 Sphingomonas sp. Root241 Isolate Unclassified
5 2739367756 Asticcacaulis sp. CF398 Isolate Unclassified
6 2857504554 Caulobacter sp. R-72291 Isolate Unclassified
7 3300000041 Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 old rhizosphere Metagenome Rhizosphere
8 3300000043 Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 young rhizosphere Metagenome Rhizosphere
9 3300000652 Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Col-0 young rhizosphere DNA Metagenome Rhizosphere
10 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
11 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
12 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
13 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
14 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
15 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
16 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
17 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
18 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
19 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
20 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
21 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
22 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
23 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
24 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
25 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
26 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
27 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
30 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
31 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
32 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
35 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
36 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
37 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
38 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
39 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
40 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
41 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
42 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
43 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
44 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
45 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
46 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
47 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
48 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
49 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
50 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
51 3300015684 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.2_F02 Metagenome Unclassified
52 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
53 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
54 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
55 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
56 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
57 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
59 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
60 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
61 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
63 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
82 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
86 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
87 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
88 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
89 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
90 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
91 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
92 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
93 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
94 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
95 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
96 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
97 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
98 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
99 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
100 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
101 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
102 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
103 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
104 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
105 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
106 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
107 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
108 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
109 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
110 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
111 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
112 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
113 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
114 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
115 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
116 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
117 3300042121 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515D_E14_082716_2398 Metagenome Rhizosphere
118 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
119 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
120 3300042185 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515W_E14_080116_2592 Metagenome Rhizosphere
121 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
122 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
123 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
124 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
125 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
126 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
127 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
128 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
129 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
130 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
131 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
132 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
133 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
134 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
135 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
136 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
137 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
138 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
139 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
140 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
141 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
142 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
143 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
144 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
145 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
152 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
153 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
154 3300049759 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_A_4_drought Metagenome Rhizosphere
155 3300049761 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_A_4_control Metagenome Rhizosphere
156 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
158 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
159 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
160 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
161 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
162 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
163 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
164 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
165 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
166 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
167 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
168 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
169 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
170 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
171 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
172 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
173 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
174 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
175 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
176 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
177 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
178 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
179 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
180 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
181 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
182 3300059510 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 55R_CD_T2_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
183 3300059605 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 71R_SD_T2_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
184 3300059642 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 10R_AW_T1_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
185 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
186 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.84
Metatranscriptomes 1.19
Isolates 1.98

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 36.36
Nodule 0.4
Rhizoplane 1.58
Rhizosphere 56.13
Stem 0
Stem Tuber 0
Unclassified 5.53

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1622313 2162886007 Bacteria 3722
2 ARcpr5oldR_c001291 3300000041 Bacteria 2549
3 ARcpr5yngRDRAFT_c007633 3300000043 Bacteria 948
4 ARCol0yngRDRAFT_1010216 3300000652 Bacteria 684
5 JGI24738J21930_10079469 3300002075 Bacteria 685
6 JGI25153J46596_10012126 3300003215 Bacteria 3751
7 Ga0055537_1004340 3300003773 Bacteria 4071
8 Ga0055524_1000405 3300003775 Bacteria 36783
9 Ga0055536_1003685 3300003781 Bacteria 8140
10 Ga0055536_1018539 3300003781 Bacteria 2227
11 Ga0055528_1047051 3300003790 Bacteria 904
12 Ga0055530_10000013 3300003791 Bacteria 153390
13 Ga0055530_10000429 3300003791 Bacteria 37251
14 Ga0055530_10009932 3300003791 Bacteria 3586
15 Ga0055530_10073321 3300003791 Bacteria 733
16 Ga0055531_10000472 3300003794 Bacteria 37251
17 Ga0055531_10007501 3300003794 Bacteria 5938
18 Ga0055531_10009911 3300003794 Bacteria 4816
19 Ga0055531_10010590 3300003794 Bacteria 4560
20 Ga0065165_1002998 3300005262 Bacteria 12792
21 Ga0065165_1005638 3300005262 Bacteria 6923
22 Ga0070658_10000068 3300005327 Bacteria 102788
23 Ga0070658_10031166 3300005327 Bacteria 4281
24 Ga0070670_100564855 3300005331 Bacteria 1016
25 Ga0070666_10001981 3300005335 Bacteria 12451
26 Ga0070668_100000041 3300005347 Bacteria 78742
27 Ga0070668_100000195 3300005347 Bacteria 39719
28 Ga0070669_100015452 3300005353 Bacteria 5440
29 Ga0070667_100000058 3300005367 Bacteria 148071
30 Ga0070662_100465934 3300005457 Bacteria 1051
31 Ga0070665_100000088 3300005548 Bacteria 177729
32 Ga0070704_101329669 3300005549 Bacteria 658
33 Ga0068855_100139536 3300005563 Bacteria 2765
34 Ga0068854_100043784 3300005578 Bacteria 3175
35 Ga0068856_100047956 3300005614 Bacteria 4208
36 Ga0068852_100000930 3300005616 Bacteria 19327
37 Ga0068863_100000031 3300005841 Bacteria 175602
38 Ga0068860_100011227 3300005843 Bacteria 8829
39 Ga0068862_100023458 3300005844 Bacteria 5170
40 Ga0075365_10147929 3300006038 Bacteria 1633
41 Ga0075368_10002231 3300006042 Bacteria 6296
42 Ga0075364_10019953 3300006051 Bacteria 4212
43 Ga0075362_10361464 3300006177 Bacteria 728
44 Ga0075369_10048726 3300006186 Bacteria 1829
45 Ga0075366_10210703 3300006195 Bacteria 1183
46 Ga0075370_10008388 3300006353 Bacteria 5317
47 Ga0075370_10117602 3300006353 Bacteria 1546
48 Ga0075370_10221000 3300006353 Bacteria 1119
49 Ga0099826_10281798 3300006948 Bacteria 859
50 Ga0105240_10004776 3300009093 Bacteria 20437
51 Ga0105241_11014086 3300009174 Bacteria 777
52 Ga0105248_10002901 3300009177 Bacteria 19023
53 Ga0105238_10046288 3300009551 Bacteria 4391
54 Ga0105239_10679428 3300010375 Bacteria 1177
55 Ga0157373_10147525 3300013100 Bacteria 1655
56 Ga0157370_10164060 3300013104 Bacteria 2067
57 Ga0163162_12515396 3300013306 Bacteria 592
58 Ga0183365_10002 3300015684 Bacteria 545891
59 Ga0163161_10003037 3300017792 Bacteria 11854
60 Ga0163161_10468761 3300017792 Bacteria 1021
61 Ga0163161_10538495 3300017792 Bacteria 956
62 Ga0207425_1009514 3300025245 Bacteria 2411
63 Ga0209565_1000029 3300025263 Bacteria 340335
64 Ga0209673_1005254 3300025273 Bacteria 6583
65 Ga0209675_1000275 3300025291 Bacteria 49474
66 Ga0209675_1011217 3300025291 Bacteria 2987
67 Ga0209676_1000453 3300025292 Bacteria 69137
68 Ga0209676_1000648 3300025292 Bacteria 49941
69 Ga0209025_1032723 3300025294 Bacteria 2423
70 Ga0209564_1034686 3300025295 Bacteria 1475
71 Ga0209758_1001963 3300025297 Bacteria 22239
72 Ga0209050_1000042 3300025298 Bacteria 402842
73 Ga0209050_1000167 3300025298 Bacteria 151608
74 Ga0209050_1000822 3300025298 Bacteria 43254
75 Ga0209050_1022465 3300025298 Bacteria 2259
76 Ga0209050_1059111 3300025298 Bacteria 917
77 Ga0209256_1000008 3300025299 Bacteria 975723
78 Ga0209257_1000028 3300025304 Bacteria 699493
79 Ga0209257_1000135 3300025304 Bacteria 205668
80 Ga0209257_1000487 3300025304 Bacteria 71315
81 Ga0209257_1008061 3300025304 Bacteria 6132
82 Ga0209257_1026885 3300025304 Bacteria 1928
83 Ga0207680_10001313 3300025903 Bacteria 11735
84 Ga0207647_10161485 3300025904 Bacteria 1307
85 Ga0207705_10000621 3300025909 Bacteria 29636
86 Ga0207705_10010242 3300025909 Bacteria 6821
87 Ga0207695_10003649 3300025913 Bacteria 21496
88 Ga0207681_10011449 3300025923 Bacteria 5450
89 Ga0207694_10030226 3300025924 Bacteria 4137
90 Ga0207711_10001488 3300025941 Bacteria 21817
91 Ga0207679_10086867 3300025945 Bacteria 2407
92 Ga0207667_10154210 3300025949 Bacteria 2364
93 Ga0207668_10000038 3300025972 Bacteria 112486
94 Ga0207668_10001999 3300025972 Bacteria 11914
95 Ga0207640_10005493 3300025981 Bacteria 6910
96 Ga0207658_10000037 3300025986 Bacteria 148087
97 Ga0207639_10183842 3300026041 Bacteria 1780
98 Ga0207702_10023174 3300026078 Bacteria 5150
99 Ga0207641_10000050 3300026088 Bacteria 175954
100 Ga0207675_100679070 3300026118 Bacteria 1038
101 Ga0207675_101533925 3300026118 Bacteria 687
102 Ga0207698_10000005 3300026142 Bacteria 295687
103 Ga0209813_10001771 3300027866 Bacteria 4862
104 Ga0268266_10000074 3300028379 Bacteria 230993
105 Ga0268266_10383132 3300028379 Bacteria 1327
106 Ga0268265_10001782 3300028380 Bacteria 17270
107 Ga0268264_10000112 3300028381 Bacteria 203742
108 Ga0268264_10138467 3300028381 Bacteria 2167
109 Ga0265324_10193108 3300029957 Bacteria 691
110 Ga0314311_1181693 3300030733 Bacteria 966
111 Ga0265328_10027588 3300031239 Bacteria 2127
112 Ga0265331_10000015 3300031250 Bacteria 289934
113 Ga0265327_10057165 3300031251 Bacteria 2008
114 Ga0307513_10012571 3300031456 Bacteria 10438
115 Ga0307513_10388156 3300031456 Bacteria 1134
116 Ga0307405_10249947 3300031731 Bacteria 1319
117 Ga0307410_10875352 3300031852 Bacteria 768
118 Ga0307406_10058624 3300031901 Bacteria 2475
119 Ga0307412_10295701 3300031911 Bacteria 1277
120 Ga0307412_10726558 3300031911 Bacteria 855
121 Ga0307409_100219065 3300031995 Bacteria 1717
122 Ga0307416_100360685 3300032002 Bacteria 1475
123 Ga0307414_10008032 3300032004 Bacteria 5965
124 Ga0307414_10531201 3300032004 Bacteria 1045
125 Ga0307414_11019973 3300032004 Bacteria 762
126 Ga0307411_10239297 3300032005 Bacteria 1420
127 Ga0307415_100285138 3300032126 Bacteria 1360
128 Ga0307415_100754534 3300032126 Bacteria 884
129 Ga0395905_0000038 3300037471 Bacteria 253600
130 Ga0395905_0352330 3300037471 Bacteria 1364
131 Ga0395905_0579572 3300037471 Bacteria 1023
132 Ga0436364_1123464 3300037853 Bacteria 582
133 Ga0439436_0009031 3300041404 Bacteria 3056
134 Ga0439436_0033910 3300041404 Bacteria 1477
135 Ga0439461_0000962 3300041410 Bacteria 4319
136 Ga0439461_0001322 3300041410 Bacteria 3809
137 Ga0439466_0051878 3300041411 Bacteria 1342
138 Ga0439465_0001715 3300041413 Bacteria 7157
139 Ga0439465_0006944 3300041413 Bacteria 3595
140 Ga0451793_0190518 3300041452 Bacteria 725
141 Ga0451807_0793362 3300041486 Bacteria 762
142 Ga0451843_1093383 3300041509 Bacteria 615
143 Ga0451853_2850703 3300041512 Bacteria 683
144 Ga0439431_0005938 3300041997 Bacteria 2694
145 Ga0439442_005243 3300042002 Bacteria 2598
146 Ga0439445_0003617 3300042004 Bacteria 3467
147 Ga0439432_000602 3300042006 Bacteria 13546
148 Ga0439449_0069990 3300042007 Bacteria 1293
149 Ga0439457_006763 3300042014 Bacteria 2783
150 Ga0439462_0002305 3300042015 Bacteria 4418
151 Ga0439462_0005410 3300042015 Bacteria 3147
152 Ga0450919_014272 3300042121 Bacteria 897
153 Ga0439446_0009413 3300042156 Bacteria 2615
154 Ga0439446_0060155 3300042156 Bacteria 1147
155 Ga0450908_034097 3300042184 Bacteria 882
156 Ga0450909_005334 3300042185 Bacteria 1849
157 Ga0439434_0001243 3300042435 Bacteria 7326
158 Ga0466969_0003445 3300044656 Bacteria 8408
159 Ga0466966_0000078 3300044684 Bacteria 62090
160 Ga0466961_0002612 3300044693 Bacteria 11188
161 Ga0466963_0067935 3300044694 Bacteria 2393
162 Ga0466971_0127323 3300044719 Bacteria 1181
163 Ga0466957_0021684 3300044842 Bacteria 3786
164 Ga0466959_0000222 3300045049 Bacteria 37024
165 Ga0466959_0042202 3300045049 Bacteria 3365
166 Ga0466958_0019988 3300045836 Bacteria 3902
167 Ga0495627_016440 3300046453 Bacteria 2532
168 Ga0495638_0344195 3300046460 Bacteria 789
169 Ga0495650_0092385 3300046471 Bacteria 1149
170 Ga0495616_0000014 3300046513 Bacteria 191010
171 Ga0495631_0099795 3300046518 Bacteria 1250
172 Ga0495668_0000001 3300046616 Bacteria 1013420
173 Ga0495668_0014880 3300046616 Bacteria 4553
174 Ga0495625_0096676 3300046660 Bacteria 2034
175 Ga0495661_0155627 3300046665 Bacteria 1231
176 Ga0495670_0034201 3300046691 Bacteria 2531
177 Ga0495649_0000672 3300046694 Bacteria 27900
178 Ga0495681_0067329 3300047470 Bacteria 1632
179 Ga0496115_0761895 3300048918 Bacteria 756
180 Ga0496115_1103621 3300048918 Bacteria 601
181 Ga0496122_0000083 3300048925 Bacteria 208744
182 Ga0496123_0000097 3300048926 Bacteria 173894
183 Ga0496126_0001922 3300048929 Bacteria 29774
184 Ga0501034_0156952 3300049571 Bacteria 2249
185 Ga0501036_0152683 3300049572 Bacteria 1948
186 Ga0501037_0469132 3300049573 Bacteria 857
187 Ga0501037_0855881 3300049573 Bacteria 598
188 Ga0501043_0139106 3300049579 Bacteria 1902
189 Ga0501046_0101480 3300049580 Bacteria 2207
190 Ga0501047_0095482 3300049581 Bacteria 2852
191 Ga0501047_0111813 3300049581 Bacteria 2614
192 Ga0501224_006045 3300049664 Bacteria 1751
193 Ga0501249_013677 3300049679 Bacteria 1726
194 Ga0501257_040292 3300049686 Bacteria 1146
195 Ga0501262_007348 3300049759 Bacteria 1332
196 Ga0501264_026034 3300049761 Bacteria 648
197 Ga0501035_0245167 3300049822 Bacteria 1523
198 Ga0501045_0369984 3300049824 Bacteria 1067
199 nmdc:mga03683_230684_c1 3300050489 Bacteria 856
200 nmdc:mga03683_263_c1 3300050489 Bacteria 16208
201 nmdc:mga03683_74977_c1 3300050489 Bacteria 1452
202 nmdc:mga03n38_15030_c1 3300050490 Bacteria 2982
203 nmdc:mga00v17_16355_c1 3300050491 Bacteria 4181
204 nmdc:mga0yw44_13652_c1 3300050492 Bacteria 4284
205 nmdc:mga0yw44_316296_c1 3300050492 Bacteria 1048
206 nmdc:mga0k408_343223_c1 3300050493 Bacteria 890
207 nmdc:mga0k408_44634_c1 3300050493 Bacteria 2557
208 nmdc:mga06z11_102197_c1 3300050494 Bacteria 1575
209 nmdc:mga04h51_1530_c1 3300050495 Bacteria 5362
210 nmdc:mga07m45_1401_c1 3300050496 Bacteria 9956
211 nmdc:mga07m45_34_c1 3300050496 Bacteria 75514
212 nmdc:mga07m45_74781_c1 3300050496 Bacteria 1930
213 nmdc:mga07m45_87783_c1 3300050496 Bacteria 1780
214 nmdc:mga0sz30_31440_c1 3300050516 Bacteria 2197
215 Ga0500635_0000574 3300053080 Bacteria 9762
216 Ga0500643_004877 3300053087 Bacteria 5916
217 Ga0500643_007692 3300053087 Bacteria 4313
218 Ga0500643_015328 3300053087 Bacteria 2632
219 Ga0500566_0028875 3300053094 Bacteria 3240
220 Ga0500592_002602 3300053116 Bacteria 2897
221 Ga0500595_007951 3300053119 Bacteria 4358
222 Ga0500595_017506 3300053119 Bacteria 2643
223 Ga0500607_000107 3300053121 Bacteria 64565
224 Ga0500607_010436 3300053121 Bacteria 5525
225 Ga0500608_000093 3300053122 Bacteria 36398
226 Ga0500608_000123 3300053122 Bacteria 32276
227 Ga0500608_204729 3300053122 Bacteria 812
228 Ga0500559_0001127 3300053136 Bacteria 16082
229 Ga0500559_0015988 3300053136 Bacteria 3168
230 Ga0500559_0024990 3300053136 Bacteria 2542
231 Ga0500559_0030925 3300053136 Bacteria 2297
232 Ga0500559_0179467 3300053136 Bacteria 997
233 Ga0500568_0001107 3300053139 Bacteria 18110
234 Ga0500568_0298744 3300053139 Bacteria 584
235 Ga0500604_0002072 3300053151 Bacteria 5524
236 Ga0500604_0044116 3300053151 Bacteria 1357
237 Ga0500622_0000136 3300053156 Bacteria 78059
238 Ga0500622_0134214 3300053156 Bacteria 1187
239 Ga0500627_0000721 3300053158 Bacteria 8770
240 Ga0500637_0001771 3300053178 Bacteria 9325
241 Ga0500611_007346 3300053727 Bacteria 1651
242 Ga0500645_004057 3300053730 Bacteria 5743
243 Ga0500645_142143 3300053730 Bacteria 664
244 Ga0587090_053858 3300059510 Bacteria 745
245 Ga0587106_029536 3300059605 Bacteria 871
246 Ga0587069_053054 3300059642 Bacteria 727
247 Ga0501082_0422793 3300060353 Bacteria 1164
248 Ga0466962_0084513 3300061719 Bacteria 1518

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2643221560 2643821710 145
2 iso_pu_bacteria 2643221622 2644127373 145
3 iso_pu_bacteria 2739367756 2739791568 145
4 iso_pu_bacteria 2643221588 2643948762 146
5 iso_pu_bacteria 2857504554 2857506659 146
6 3300009177 Ga0105248_10002901 Ga0105248_1000290111 147
7 3300010375 Ga0105239_10679428 Ga0105239_106794282 147
8 3300025941 Ga0207711_10001488 Ga0207711_1000148812 147
9 3300025945 Ga0207679_10086867 Ga0207679_100868671 147
10 3300037471 Ga0395905_0352330 Ga0395905_0352330_525_986 147
11 3300049573 Ga0501037_0469132 Ga0501037_0469132_173_628 147
12 3300049581 Ga0501047_0095482 Ga0501047_0095482_135_596 147
13 3300003781 Ga0055536_1003685 Ga0055536_10036858 148
14 3300003781 Ga0055536_1018539 Ga0055536_10185393 148
15 3300003791 Ga0055530_10000013 Ga0055530_10000013135 148
16 3300003791 Ga0055530_10073321 Ga0055530_100733212 148
17 3300003794 Ga0055531_10007501 Ga0055531_100075013 148
18 3300003794 Ga0055531_10009911 Ga0055531_100099116 148
19 3300015684 Ga0183365_10002 Ga0183365_1000297 148
20 3300025291 Ga0209675_1000275 Ga0209675_100027511 148
21 3300025292 Ga0209676_1000453 Ga0209676_100045318 148
22 3300025292 Ga0209676_1000648 Ga0209676_100064813 148
23 3300025294 Ga0209025_1032723 Ga0209025_10327232 148
24 3300025298 Ga0209050_1000042 Ga0209050_1000042255 148
25 3300025298 Ga0209050_1000822 Ga0209050_100082231 148
26 3300025298 Ga0209050_1059111 Ga0209050_10591112 148
27 3300025304 Ga0209257_1000135 Ga0209257_1000135132 148
28 3300025304 Ga0209257_1000487 Ga0209257_10004876 148
29 3300029957 Ga0265324_10193108 Ga0265324_101931081 148
30 3300032004 Ga0307414_10008032 Ga0307414_100080323 148
31 3300032005 Ga0307411_10239297 Ga0307411_102392971 148
32 3300037471 Ga0395905_0000038 Ga0395905_0000038_138523_138993 148
33 3300044656 Ga0466969_0003445 Ga0466969_0003445_5584_6048 148
34 3300044684 Ga0466966_0000078 Ga0466966_0000078_39130_39594 148
35 3300044693 Ga0466961_0002612 Ga0466961_0002612_1264_1728 148
36 3300044694 Ga0466963_0067935 Ga0466963_0067935_1795_2259 148
37 3300044719 Ga0466971_0127323 Ga0466971_0127323_663_1133 148
38 3300044842 Ga0466957_0021684 Ga0466957_0021684_2478_2942 148
39 3300045049 Ga0466959_0000222 Ga0466959_0000222_14581_15045 148
40 3300045836 Ga0466958_0019988 Ga0466958_0019988_2814_3278 148
41 3300049572 Ga0501036_0152683 Ga0501036_0152683_42_506 148
42 3300049573 Ga0501037_0855881 Ga0501037_0855881_78_545 148
43 3300049579 Ga0501043_0139106 Ga0501043_0139106_90_554 148
44 3300049581 Ga0501047_0111813 Ga0501047_0111813_43_507 148
45 3300049664 Ga0501224_006045 Ga0501224_006045_884_1336 148
46 3300049679 Ga0501249_013677 Ga0501249_013677_187_639 148
47 3300049822 Ga0501035_0245167 Ga0501035_0245167_518_985 148
48 3300053080 Ga0500635_0000574 Ga0500635_0000574_7429_7893 148
49 3300053122 Ga0500608_000123 Ga0500608_000123_25285_25752 148
50 3300053136 Ga0500559_0030925 Ga0500559_0030925_621_1085 148
51 3300053139 Ga0500568_0001107 Ga0500568_0001107_9480_9926 148
52 3300061719 Ga0466962_0084513 Ga0466962_0084513_868_1332 148
53 3300000041 ARcpr5oldR_c001291 ARcpr5oldR_0012913 149
54 3300000043 ARcpr5yngRDRAFT_c007633 ARcpr5yngRDRAFT_0076332 149
55 3300000652 ARCol0yngRDRAFT_1010216 ARCol0yngRDRAFT_10102161 149
56 3300003215 JGI25153J46596_10012126 JGI25153J46596_100121262 149
57 3300003773 Ga0055537_1004340 Ga0055537_10043404 149
58 3300003775 Ga0055524_1000405 Ga0055524_100040528 149
59 3300003790 Ga0055528_1047051 Ga0055528_10470512 149
60 3300003791 Ga0055530_10000429 Ga0055530_100004295 149
61 3300003791 Ga0055530_10009932 Ga0055530_100099323 149
62 3300003794 Ga0055531_10000472 Ga0055531_100004725 149
63 3300003794 Ga0055531_10010590 Ga0055531_100105903 149
64 3300005262 Ga0065165_1002998 Ga0065165_100299813 149
65 3300005262 Ga0065165_1005638 Ga0065165_10056384 149
66 3300005335 Ga0070666_10001981 Ga0070666_100019811 149
67 3300005347 Ga0070668_100000041 Ga0070668_10000004179 149
68 3300005347 Ga0070668_100000195 Ga0070668_1000001955 149
69 3300005353 Ga0070669_100015452 Ga0070669_1000154522 149
70 3300005367 Ga0070667_100000058 Ga0070667_10000005889 149
71 3300005548 Ga0070665_100000088 Ga0070665_100000088103 149
72 3300005841 Ga0068863_100000031 Ga0068863_10000003189 149
73 3300005843 Ga0068860_100011227 Ga0068860_10001122710 149
74 3300005844 Ga0068862_100023458 Ga0068862_1000234584 149
75 3300006038 Ga0075365_10147929 Ga0075365_101479292 149
76 3300006042 Ga0075368_10002231 Ga0075368_100022316 149
77 3300006177 Ga0075362_10361464 Ga0075362_103614641 149
78 3300006353 Ga0075370_10008388 Ga0075370_100083884 149
79 3300006353 Ga0075370_10117602 Ga0075370_101176022 149
80 3300006353 Ga0075370_10221000 Ga0075370_102210002 149
81 3300006948 Ga0099826_10281798 Ga0099826_102817981 149
82 3300013306 Ga0163162_12515396 Ga0163162_125153961 149
83 3300017792 Ga0163161_10003037 Ga0163161_1000303710 149
84 3300017792 Ga0163161_10468761 Ga0163161_104687611 149
85 3300017792 Ga0163161_10538495 Ga0163161_105384952 149
86 3300025245 Ga0207425_1009514 Ga0207425_10095143 149
87 3300025263 Ga0209565_1000029 Ga0209565_1000029153 149
88 3300025273 Ga0209673_1005254 Ga0209673_10052544 149
89 3300025291 Ga0209675_1011217 Ga0209675_10112172 149
90 3300025295 Ga0209564_1034686 Ga0209564_10346861 149
91 3300025297 Ga0209758_1001963 Ga0209758_10019632 149
92 3300025298 Ga0209050_1000167 Ga0209050_100016753 149
93 3300025298 Ga0209050_1022465 Ga0209050_10224652 149
94 3300025299 Ga0209256_1000008 Ga0209256_1000008762 149
95 3300025304 Ga0209257_1000028 Ga0209257_1000028683 149
96 3300025304 Ga0209257_1008061 Ga0209257_10080612 149
97 3300025304 Ga0209257_1026885 Ga0209257_10268852 149
98 3300025903 Ga0207680_10001313 Ga0207680_100013132 149
99 3300025923 Ga0207681_10011449 Ga0207681_100114492 149
100 3300025972 Ga0207668_10000038 Ga0207668_1000003866 149
101 3300025972 Ga0207668_10001999 Ga0207668_100019992 149
102 3300025986 Ga0207658_10000037 Ga0207658_1000003789 149
103 3300026088 Ga0207641_10000050 Ga0207641_1000005042 149
104 3300026118 Ga0207675_101533925 Ga0207675_1015339252 149
105 3300027866 Ga0209813_10001771 Ga0209813_100017714 149
106 3300028379 Ga0268266_10000074 Ga0268266_1000007458 149
107 3300028379 Ga0268266_10383132 Ga0268266_103831322 149
108 3300028380 Ga0268265_10001782 Ga0268265_100017822 149
109 3300028381 Ga0268264_10000112 Ga0268264_10000112191 149
110 3300028381 Ga0268264_10138467 Ga0268264_101384672 149
111 3300030733 Ga0314311_1181693 Ga0314311_11816932 149
112 3300031239 Ga0265328_10027588 Ga0265328_100275883 149
113 3300031250 Ga0265331_10000015 Ga0265331_10000015273 149
114 3300031251 Ga0265327_10057165 Ga0265327_100571652 149
115 3300031456 Ga0307513_10012571 Ga0307513_100125719 149
116 3300031852 Ga0307410_10875352 Ga0307410_108753522 149
117 3300031995 Ga0307409_100219065 Ga0307409_1002190652 149
118 3300032004 Ga0307414_11019973 Ga0307414_110199731 149
119 3300032126 Ga0307415_100754534 Ga0307415_1007545342 149
120 3300037471 Ga0395905_0579572 Ga0395905_0579572_30_482 149
121 3300037853 Ga0436364_1123464 Ga0436364_1123464_18_482 149
122 3300041404 Ga0439436_0009031 Ga0439436_0009031_1618_2073 149
123 3300041404 Ga0439436_0033910 Ga0439436_0033910_344_799 149
124 3300041410 Ga0439461_0000962 Ga0439461_0000962_1625_2080 149
125 3300041410 Ga0439461_0001322 Ga0439461_0001322_698_1153 149
126 3300041411 Ga0439466_0051878 Ga0439466_0051878_714_1169 149
127 3300041413 Ga0439465_0001715 Ga0439465_0001715_6559_7014 149
128 3300041413 Ga0439465_0006944 Ga0439465_0006944_1618_2073 149
129 3300041452 Ga0451793_0190518 Ga0451793_0190518_133_588 149
130 3300041486 Ga0451807_0793362 Ga0451807_0793362_220_672 149
131 3300041509 Ga0451843_1093383 Ga0451843_1093383_45_500 149
132 3300041512 Ga0451853_2850703 Ga0451853_2850703_142_594 149
133 3300041997 Ga0439431_0005938 Ga0439431_0005938_2118_2573 149
134 3300042002 Ga0439442_005243 Ga0439442_005243_1360_1815 149
135 3300042004 Ga0439445_0003617 Ga0439445_0003617_82_537 149
136 3300042006 Ga0439432_000602 Ga0439432_000602_6661_7116 149
137 3300042007 Ga0439449_0069990 Ga0439449_0069990_348_803 149
138 3300042014 Ga0439457_006763 Ga0439457_006763_1623_2078 149
139 3300042015 Ga0439462_0002305 Ga0439462_0002305_1550_2005 149
140 3300042015 Ga0439462_0005410 Ga0439462_0005410_1833_2288 149
141 3300042121 Ga0450919_014272 Ga0450919_014272_296_751 149
142 3300042156 Ga0439446_0009413 Ga0439446_0009413_885_1340 149
143 3300042156 Ga0439446_0060155 Ga0439446_0060155_552_1010 149
144 3300042184 Ga0450908_034097 Ga0450908_034097_155_610 149
145 3300042185 Ga0450909_005334 Ga0450909_005334_1368_1820 149
146 3300042435 Ga0439434_0001243 Ga0439434_0001243_2451_2906 149
147 3300046453 Ga0495627_016440 Ga0495627_016440_663_1115 149
148 3300046460 Ga0495638_0344195 Ga0495638_0344195_40_489 149
149 3300046471 Ga0495650_0092385 Ga0495650_0092385_196_645 149
150 3300046513 Ga0495616_0000014 Ga0495616_0000014_22785_23234 149
151 3300046616 Ga0495668_0014880 Ga0495668_0014880_612_1061 149
152 3300046660 Ga0495625_0096676 Ga0495625_0096676_15_470 149
153 3300046665 Ga0495661_0155627 Ga0495661_0155627_161_616 149
154 3300046691 Ga0495670_0034201 Ga0495670_0034201_1508_1963 149
155 3300046694 Ga0495649_0000672 Ga0495649_0000672_26046_26495 149
156 3300047470 Ga0495681_0067329 Ga0495681_0067329_557_1009 149
157 3300048918 Ga0496115_0761895 Ga0496115_0761895_183_650 149
158 3300048918 Ga0496115_1103621 Ga0496115_1103621_117_584 149
159 3300048925 Ga0496122_0000083 Ga0496122_0000083_178865_179314 149
160 3300048926 Ga0496123_0000097 Ga0496123_0000097_93058_93507 149
161 3300048929 Ga0496126_0001922 Ga0496126_0001922_9520_9987 149
162 3300049571 Ga0501034_0156952 Ga0501034_0156952_745_1200 149
163 3300049580 Ga0501046_0101480 Ga0501046_0101480_38_487 149
164 3300049686 Ga0501257_040292 Ga0501257_040292_358_825 149
165 3300049761 Ga0501264_026034 Ga0501264_026034_111_578 149
166 3300049824 Ga0501045_0369984 Ga0501045_0369984_534_983 149
167 3300050489 nmdc:mga03683_230684_c1 nmdc:mga03683_230684_c1_146_601 149
168 3300050489 nmdc:mga03683_263_c1 nmdc:mga03683_263_c1_13125_13580 149
169 3300050490 nmdc:mga03n38_15030_c1 nmdc:mga03n38_15030_c1_1496_1951 149
170 3300050492 nmdc:mga0yw44_13652_c1 nmdc:mga0yw44_13652_c1_24_479 149
171 3300050492 nmdc:mga0yw44_316296_c1 nmdc:mga0yw44_316296_c1_24_479 149
172 3300050493 nmdc:mga0k408_44634_c1 nmdc:mga0k408_44634_c1_600_1055 149
173 3300050494 nmdc:mga06z11_102197_c1 nmdc:mga06z11_102197_c1_729_1184 149
174 3300050495 nmdc:mga04h51_1530_c1 nmdc:mga04h51_1530_c1_181_636 149
175 3300050496 nmdc:mga07m45_1401_c1 nmdc:mga07m45_1401_c1_5938_6393 149
176 3300050496 nmdc:mga07m45_34_c1 nmdc:mga07m45_34_c1_73294_73749 149
177 3300050496 nmdc:mga07m45_74781_c1 nmdc:mga07m45_74781_c1_1076_1528 149
178 3300050496 nmdc:mga07m45_87783_c1 nmdc:mga07m45_87783_c1_911_1366 149
179 3300053087 Ga0500643_004877 Ga0500643_004877_2870_3319 149
180 3300053087 Ga0500643_015328 Ga0500643_015328_50_517 149
181 3300053094 Ga0500566_0028875 Ga0500566_0028875_838_1293 149
182 3300053119 Ga0500595_007951 Ga0500595_007951_1087_1539 149
183 3300053119 Ga0500595_017506 Ga0500595_017506_1653_2108 149
184 3300053121 Ga0500607_000107 Ga0500607_000107_17087_17542 149
185 3300053121 Ga0500607_010436 Ga0500607_010436_904_1359 149
186 3300053122 Ga0500608_000093 Ga0500608_000093_20974_21441 149
187 3300053122 Ga0500608_204729 Ga0500608_204729_192_647 149
188 3300053136 Ga0500559_0001127 Ga0500559_0001127_11302_11757 149
189 3300053136 Ga0500559_0015988 Ga0500559_0015988_2658_3125 149
190 3300053136 Ga0500559_0024990 Ga0500559_0024990_1979_2434 149
191 3300053136 Ga0500559_0179467 Ga0500559_0179467_66_515 149
192 3300053139 Ga0500568_0298744 Ga0500568_0298744_49_504 149
193 3300053151 Ga0500604_0002072 Ga0500604_0002072_3725_4174 149
194 3300053151 Ga0500604_0044116 Ga0500604_0044116_681_1136 149
195 3300053156 Ga0500622_0000136 Ga0500622_0000136_27594_28049 149
196 3300053156 Ga0500622_0134214 Ga0500622_0134214_574_1023 149
197 3300053158 Ga0500627_0000721 Ga0500627_0000721_3085_3534 149
198 3300053178 Ga0500637_0001771 Ga0500637_0001771_5505_5960 149
199 3300053730 Ga0500645_004057 Ga0500645_004057_4517_4972 149
200 3300059510 Ga0587090_053858 Ga0587090_053858_22_489 149
201 3300059605 Ga0587106_029536 Ga0587106_029536_170_637 149
202 3300059642 Ga0587069_053054 Ga0587069_053054_115_582 149
203 3300060353 Ga0501082_0422793 Ga0501082_0422793_403_858 149
204 3300002075 JGI24738J21930_10079469 JGI24738J21930_100794691 150
205 3300005327 Ga0070658_10000068 Ga0070658_1000006898 150
206 3300005327 Ga0070658_10031166 Ga0070658_100311663 150
207 3300005331 Ga0070670_100564855 Ga0070670_1005648552 150
208 3300005457 Ga0070662_100465934 Ga0070662_1004659342 150
209 3300005549 Ga0070704_101329669 Ga0070704_1013296692 150
210 3300005563 Ga0068855_100139536 Ga0068855_1001395362 150
211 3300005578 Ga0068854_100043784 Ga0068854_1000437842 150
212 3300005614 Ga0068856_100047956 Ga0068856_1000479562 150
213 3300005616 Ga0068852_100000930 Ga0068852_10000093018 150
214 3300006051 Ga0075364_10019953 Ga0075364_100199532 150
215 3300006186 Ga0075369_10048726 Ga0075369_100487262 150
216 3300006195 Ga0075366_10210703 Ga0075366_102107032 150
217 3300009093 Ga0105240_10004776 Ga0105240_1000477620 150
218 3300009174 Ga0105241_11014086 Ga0105241_110140861 150
219 3300009551 Ga0105238_10046288 Ga0105238_100462882 150
220 3300013100 Ga0157373_10147525 Ga0157373_101475252 150
221 3300025904 Ga0207647_10161485 Ga0207647_101614851 150
222 3300025909 Ga0207705_10000621 Ga0207705_100006219 150
223 3300025909 Ga0207705_10010242 Ga0207705_100102429 150
224 3300025913 Ga0207695_10003649 Ga0207695_1000364913 150
225 3300025924 Ga0207694_10030226 Ga0207694_100302262 150
226 3300025949 Ga0207667_10154210 Ga0207667_101542102 150
227 3300025981 Ga0207640_10005493 Ga0207640_100054937 150
228 3300026041 Ga0207639_10183842 Ga0207639_101838424 150
229 3300026078 Ga0207702_10023174 Ga0207702_100231742 150
230 3300026118 Ga0207675_100679070 Ga0207675_1006790701 150
231 3300026142 Ga0207698_10000005 Ga0207698_10000005273 150
232 3300031456 Ga0307513_10388156 Ga0307513_103881562 150
233 3300031731 Ga0307405_10249947 Ga0307405_102499472 150
234 3300031901 Ga0307406_10058624 Ga0307406_100586242 150
235 3300031911 Ga0307412_10295701 Ga0307412_102957012 150
236 3300031911 Ga0307412_10726558 Ga0307412_107265581 150
237 3300032002 Ga0307416_100360685 Ga0307416_1003606852 150
238 3300032004 Ga0307414_10531201 Ga0307414_105312012 150
239 3300032126 Ga0307415_100285138 Ga0307415_1002851382 150
240 3300049759 Ga0501262_007348 Ga0501262_007348_586_1044 150
241 3300050489 nmdc:mga03683_74977_c1 nmdc:mga03683_74977_c1_236_700 150
242 3300050491 nmdc:mga00v17_16355_c1 nmdc:mga00v17_16355_c1_723_1187 150
243 3300050493 nmdc:mga0k408_343223_c1 nmdc:mga0k408_343223_c1_250_714 150
244 3300050516 nmdc:mga0sz30_31440_c1 nmdc:mga0sz30_31440_c1_938_1402 150
245 3300046518 Ga0495631_0099795 Ga0495631_0099795_66_536 151
246 3300053116 Ga0500592_002602 Ga0500592_002602_601_1074 151
247 3300053727 Ga0500611_007346 Ga0500611_007346_1030_1503 151
248 3300053087 Ga0500643_007692 Ga0500643_007692_1644_2102 152
249 3300045049 Ga0466959_0042202 Ga0466959_0042202_1611_2111 158
250 3300053730 Ga0500645_142143 Ga0500645_142143_152_634 158
251 3300013104 Ga0157370_10164060 Ga0157370_101640602 167
252 3300046616 Ga0495668_0000001 Ga0495668_0000001_870009_870554 170
253 2162886007 SwRhRL2b_contig_1622313 SwRhRL2b_0694.00000440 178

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00160

Pro_isomerase

Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD

18

160

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
1xyh-assembly1.cif.gz_A crystal structure of recombinant human cyclophilin j 0.9355 33 178
7abi-assembly1.cif.gz_t human pre-bact-2 spliceosome 0.9271 33 176
1zkc-assembly2.cif.gz_B crystal structure of the cyclophiln_ring domain of human peptidylprolyl isomerase (cyclophilin)-like 2 isoform b 0.9268 32 177
2poe-assembly1.cif.gz_A crystal structure of cryptosporidium parvum cyclophilin type peptidyl-prolyl cis-trans isomerase cgd2_1660 0.9258 32 178
2qer-assembly1.cif.gz_A crystal structure of cryptosporidium parvum cyclophilin type peptidyl-prolyl cis-trans isomerase cgd2_1660 in the presence of dipeptide ala-pro 0.9257 33 178
ID Description Score Start End Superfamily
1xyhA00 Mainly Beta;Beta Barrel;Cyclophilin;Cyclophilin-like 0.9355 33 178 2.40.100.10
af_A0A0R4J2Z8_2_164_2.40.100.10 Mainly Beta;Beta Barrel;Cyclophilin;Cyclophilin-like 0.9336 32 178 2.40.100.10
af_Q9FJX0_326_510_2.40.100.10 Mainly Beta;Beta Barrel;Cyclophilin;Cyclophilin-like 0.9287 32 178 2.40.100.10
af_Q8I621_1_180_2.40.100.10 Mainly Beta;Beta Barrel;Cyclophilin;Cyclophilin-like 0.926 28 178 2.40.100.10
af_P52012_262_474_2.40.100.10 Mainly Beta;Beta Barrel;Cyclophilin;Cyclophilin-like 0.9253 32 178 2.40.100.10
ID Description Score Start End GO Terms
AF-A0A2N7XTZ8-F1-model_v4 Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) 1.002 73 163 GO:0140839
GO:0140840
AF-A0A514C1T2-F1-model_v4 Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) 1 33 178 GO:0006457
GO:0140839
GO:0140840
AF-A0A6L3ZQ84-F1-model_v4 deleted 1 48 176
AF-A0A1F8IKR6-F1-model_v4 deleted 1 33 152
AF-A0A7C2XXL5-F1-model_v4 Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) 0.9996 33 177 GO:0006457
GO:0140839
GO:0140840

Feature Viewer

pLDDT pTM Quality
85.94 0.77 High
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Predicted Structure (AlphaFold2)

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