F364040

General Info

Members Datasets Scaffolds Average Seq Length
253 187 507 426

Family's Representative Sequence

Representative Sequence 3300009986|Ga0105033_100422|Ga0105033_1004222
Length 453
Sequence MSASRVRPARDVHPAIFTPRTGSNVHDVDVDDLIALDRAHVWHPYGPMPGRQEPLVVSSAEGVRLRLTDGRELVDGMSSWWAAIHGYRRPELDRAVTDQLSRMSHVMFGGLTHEPAVRLASTLVKLTPSPLRHVFLCDSGSVSVEVAVKMCLQYWRSRGRAEKRRLLTWRGGYHGDTFQPMSVCDPEGGMHALWRGVLADNVFARQPPAGYGVGADPDYVTHLADLLGRHAGELAAVIVEPVVQGAGGMRFHDPEYLHVLRELTLAHDVLLIFDEIATGFGRTGTFFAADHAAVSPDVMCLGKALTGGYVSLAATLCDSRIAEGISGGEVPVLAHGPTFMANPLAVSVANASIDLLLSRDWAADVRRVEAALVRGLAPAAELPGVRDVRVLGGIGVVQLDHEVDVPAATRAAVSAGVWLRPFRDLIYTMPPYVTDDADLAAIASAVCAAAAAG

Samples

Sample ID Description Type Environment
1 3300009986 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_92 metaG Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
4 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
5 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
6 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
7 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
8 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
9 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
10 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
11 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
12 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
13 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
14 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
15 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
16 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
17 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
18 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
19 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
20 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
21 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
22 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
23 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
24 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
32 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
34 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
35 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
36 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
37 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
38 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
39 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
40 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
41 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
42 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
43 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
44 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
45 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
46 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
47 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
48 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
49 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
50 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
51 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
52 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
53 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
54 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
55 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
56 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
57 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
58 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
59 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
60 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
61 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
62 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
63 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
64 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
65 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
66 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
67 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
68 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
69 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
70 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
71 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
72 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
73 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
74 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
75 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
76 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
77 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
78 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
79 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
80 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
81 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
82 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
83 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
84 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
85 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
86 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
87 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
88 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
89 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
90 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
91 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
92 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
93 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
94 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
95 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
96 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
97 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
98 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
99 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
100 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
101 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
102 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
103 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
104 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
105 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
106 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
121 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
122 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
123 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
124 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
125 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
126 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
127 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
128 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
129 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
130 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
133 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
134 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
135 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
136 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
137 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
138 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
139 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
140 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
141 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
142 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
143 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
144 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
145 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
146 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
147 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
148 2501939600 Micromonospora sp. L5 Isolate Unclassified
149 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
150 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
151 2643221548 Streptomyces sp. Root55 Isolate Unclassified
152 2643221601 Kitasatospora sp. Root187 Isolate Unclassified
153 2643221631 Kitasatospora sp. Root107 Isolate Unclassified
154 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
155 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
156 2744054611 Aldersonia kunmingensis DSM 45001 Isolate Rhizosphere
157 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
158 2767802112 Streptomyces avicenniae NRRL B-24776 Isolate Rhizosphere
159 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
160 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
161 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
162 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
163 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
164 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
165 2858868258 Micromonospora sp. MH33 Isolate Unclassified
166 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
167 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
168 2867346516 Streptomyces radicis AZ1-7 Isolate Unclassified
169 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
170 2899370129 Amycolatopsis alkalitolerans SYSUP0005 Isolate Stem Tuber
171 2902582711 Micromonospora sp. AP08 Isolate Unclassified
172 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
173 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
174 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
175 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
176 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
177 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
178 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
179 649633069 Micromonospora sp. L5 Isolate Unclassified
180 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
181 8003870546 Micromonospora tarensis STR1s_6 Isolate Rhizosphere
182 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
183 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
184 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere
185 8055412473 Micromonospora phytophila DSM 105363 Isolate Nodule
186 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere
187 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 84.19
Metatranscriptomes 0
Isolates 15.81

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.37
Nodule 0.4
Rhizoplane 0.79
Rhizosphere 80.24
Stem 0
Stem Tuber 0.4
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105033_100422 3300009986 Bacteria 3313
2 rootH1_10036630 3300003316 Bacteria 2253
3 rootH1_10036630 3300003323 Bacteria 3654
4 Ga0070668_100000250 3300005347 Bacteria 35693
5 Ga0070667_100014345 3300005367 Bacteria 6549
6 Ga0070714_100008421 3300005435 Bacteria 8053
7 Ga0070710_10024731 3300005437 Bacteria 3172
8 Ga0070711_100005354 3300005439 Bacteria 7670
9 Ga0070681_10004128 3300005458 Bacteria 13734
10 Ga0070706_100086510 3300005467 Bacteria 2905
11 Ga0070695_100070522 3300005545 Bacteria 2286
12 Ga0070696_100025150 3300005546 Bacteria 4046
13 Ga0070704_100080111 3300005549 Bacteria 2401
14 Ga0081455_10000155 3300005937 Bacteria 82490
15 Ga0081455_10096213 3300005937 Bacteria 2388
16 Ga0081540_1069739 3300005983 Bacteria 1632
17 Ga0081539_10000873 3300005985 Bacteria 57852
18 Ga0081539_10001256 3300005985 Bacteria 45022
19 Ga0081539_10001767 3300005985 Bacteria 34451
20 Ga0081539_10003509 3300005985 Bacteria 19131
21 Ga0081539_10006066 3300005985 Bacteria 11820
22 Ga0081539_10047982 3300005985 Bacteria 2433
23 Ga0075365_10074041 3300006038 Bacteria 2296
24 Ga0075428_100189066 3300006844 Bacteria 2227
25 Ga0075430_100012368 3300006846 Bacteria 7259
26 Ga0075430_100016471 3300006846 Bacteria 6295
27 Ga0075431_100002978 3300006847 Bacteria 16392
28 Ga0075431_100025758 3300006847 Bacteria 6028
29 Ga0075431_100055315 3300006847 Bacteria 4093
30 Ga0075429_100008577 3300006880 Bacteria 8893
31 Ga0111539_10039301 3300009094 Bacteria 5704
32 Ga0114129_10000130 3300009147 Bacteria 77049
33 Ga0114129_10002267 3300009147 Bacteria 26615
34 Ga0105238_10033445 3300009551 Bacteria 5234
35 Ga0207692_10020044 3300025898 Bacteria 3034
36 Ga0207705_10123734 3300025909 Bacteria 1921
37 Ga0207663_10003516 3300025916 Bacteria 7685
38 Ga0207700_10003198 3300025928 Bacteria 9454
39 Ga0207664_10011254 3300025929 Bacteria 6347
40 Ga0207668_10002345 3300025972 Bacteria 11050
41 Ga0207658_10007497 3300025986 Bacteria 7433
42 Ga0207428_10020037 3300027907 Bacteria 5691
43 Ga0268266_10129800 3300028379 Bacteria 2253
44 Ga0307515_10000182 3300028794 Bacteria 154288
45 Ga0307515_10007109 3300028794 Bacteria 22231
46 Ga0307515_10026197 3300028794 Bacteria 10048
47 Ga0265338_10020230 3300028800 Bacteria 7013
48 Ga0307512_10009848 3300030522 Bacteria 9173
49 Ga0307512_10030885 3300030522 Bacteria 4651
50 Ga0265320_10027936 3300031240 Bacteria 2934
51 Ga0265327_10003624 3300031251 Bacteria 14532
52 Ga0265327_10011609 3300031251 Bacteria 6043
53 Ga0307509_10029912 3300031507 Bacteria 6033
54 Ga0307509_10063609 3300031507 Bacteria 3884
55 Ga0307508_10001109 3300031616 Bacteria 31161
56 Ga0307508_10048263 3300031616 Bacteria 3793
57 Ga0307508_10050285 3300031616 Bacteria 3710
58 Ga0307508_10145854 3300031616 Bacteria 1971
59 Ga0265314_10015899 3300031711 Bacteria 5960
60 Ga0307516_10000395 3300031730 Bacteria 56947
61 Ga0307516_10007781 3300031730 Bacteria 12239
62 Ga0307413_10000341 3300031824 Bacteria 14736
63 Ga0326468_10001452 3300031889 Bacteria 2057
64 Ga0307406_10005185 3300031901 Bacteria 7115
65 Ga0307416_100032706 3300032002 Bacteria 3934
66 Ga0307415_100042813 3300032126 Bacteria 3016
67 Ga0307415_100054965 3300032126 Bacteria 2721
68 Ga0307507_10000113 3300033179 Bacteria 133812
69 Ga0307507_10072327 3300033179 Bacteria 3109
70 Ga0307507_10110776 3300033179 Bacteria 2245
71 Ga0373948_0002830 3300034817 Bacteria 2605
72 Ga0373951_0000654 3300035091 Bacteria 9524
73 Ga0373939_0032377 3300035114 Bacteria 1519
74 Ga0373942_0000028 3300035207 Bacteria 26905
75 Ga0395899_0009043 3300037312 Bacteria 7655
76 Ga0395900_0035060 3300037418 Bacteria 5168
77 Ga0395900_0113281 3300037418 Bacteria 2784
78 Ga0395900_0171546 3300037418 Bacteria 2208
79 Ga0395898_0016998 3300037466 Bacteria 7428
80 Ga0395898_0021439 3300037466 Bacteria 6553
81 Ga0395898_0070565 3300037466 Bacteria 3377
82 Ga0395905_0113772 3300037471 Bacteria 2543
83 Ga0436364_0382334 3300037853 Bacteria 20372
84 Ga0395901_0032627 3300038443 Bacteria 5371
85 Ga0439465_0028852 3300041413 Bacteria 1762
86 Ga0451853_0199114 3300041512 Bacteria 6215
87 Ga0466969_0002552 3300044656 Bacteria 9733
88 Ga0466969_0003452 3300044656 Bacteria 8399
89 Ga0466969_0006586 3300044656 Bacteria 6175
90 Ga0466965_0086088 3300044683 Bacteria 1594
91 Ga0466966_0009858 3300044684 Bacteria 6333
92 Ga0466966_0025032 3300044684 Bacteria 3901
93 Ga0466966_0030264 3300044684 Bacteria 3515
94 Ga0466961_0002024 3300044693 Bacteria 12629
95 Ga0466961_0105304 3300044693 Bacteria 1776
96 Ga0466971_0017952 3300044719 Bacteria 3133
97 Ga0466957_0037560 3300044842 Bacteria 2917
98 Ga0466957_0171652 3300044842 Bacteria 1413
99 Ga0466960_0048696 3300044901 Bacteria 2037
100 Ga0466959_0024297 3300045049 Bacteria 4488
101 Ga0466959_0081506 3300045049 Bacteria 2332
102 Ga0466959_0105265 3300045049 Bacteria 2017
103 Ga0466958_0002108 3300045836 Bacteria 9868
104 Ga0466967_0003612 3300045976 Bacteria 10158
105 Ga0495603_0001264 3300046455 Bacteria 14738
106 Ga0495629_0002664 3300046459 Bacteria 13674
107 Ga0495629_0004892 3300046459 Bacteria 10054
108 Ga0495651_0007252 3300046462 Bacteria 8472
109 Ga0495653_0001046 3300046463 Bacteria 21304
110 Ga0495662_0008941 3300046476 Bacteria 4919
111 Ga0495664_0007228 3300046477 Bacteria 6159
112 Ga0495608_0000593 3300046511 Bacteria 24957
113 Ga0495618_0024668 3300046514 Bacteria 3726
114 Ga0495628_0188126 3300046516 Bacteria 1559
115 Ga0495666_0003101 3300046526 Bacteria 8351
116 Ga0495652_0003400 3300046529 Bacteria 15732
117 Ga0495652_0020177 3300046529 Bacteria 5923
118 Ga0495665_0013574 3300046531 Bacteria 4402
119 Ga0495640_0019085 3300046533 Bacteria 5068
120 Ga0495586_0012110 3300046535 Bacteria 4579
121 Ga0495645_0032634 3300046543 Bacteria 3798
122 Ga0495622_0006568 3300046557 Bacteria 5394
123 Ga0495668_0000477 3300046616 Bacteria 50176
124 Ga0495634_0009913 3300046642 Bacteria 7003
125 Ga0495635_0014956 3300046663 Bacteria 5428
126 Ga0495635_0030732 3300046663 Bacteria 3731
127 Ga0495588_0010001 3300046674 Bacteria 4398
128 Ga0495657_0000011 3300046675 Bacteria 207360
129 Ga0495657_0012533 3300046675 Bacteria 6296
130 Ga0495599_0010578 3300046678 Bacteria 5647
131 Ga0495623_0079379 3300046679 Bacteria 2033
132 Ga0495646_0063537 3300046680 Bacteria 2191
133 Ga0495613_0000322 3300046689 Bacteria 43462
134 Ga0495613_0002600 3300046689 Bacteria 13564
135 Ga0495613_0146198 3300046689 Bacteria 1687
136 Ga0495600_0059810 3300046809 Bacteria 2488
137 Ga0495600_0060062 3300046809 Bacteria 2482
138 Ga0495604_0000172 3300047317 Bacteria 57028
139 Ga0495672_0004989 3300047320 Bacteria 10637
140 Ga0495676_0001163 3300047321 Bacteria 22412
141 Ga0495676_0006543 3300047321 Bacteria 10737
142 Ga0495675_0021141 3300047444 Bacteria 4141
143 Ga0495684_0005669 3300047471 Bacteria 9722
144 Ga0495593_0012941 3300047673 Bacteria 4765
145 Ga0495602_0020415 3300048088 Bacteria 6548
146 Ga0495614_0002494 3300048089 Bacteria 8175
147 Ga0496101_0001296 3300048904 Bacteria 14951
148 Ga0496108_0000115 3300048911 Bacteria 79928
149 Ga0501031_0001432 3300049568 Bacteria 14779
150 Ga0501031_0081823 3300049568 Bacteria 2105
151 Ga0501031_0120087 3300049568 Bacteria 1717
152 Ga0501032_0000859 3300049569 Bacteria 24673
153 Ga0501032_0036527 3300049569 Bacteria 3353
154 Ga0501032_0074111 3300049569 Bacteria 2268
155 Ga0501033_0054008 3300049570 Bacteria 2973
156 Ga0501033_0083430 3300049570 Bacteria 2342
157 Ga0501034_0021716 3300049571 Bacteria 6540
158 Ga0501034_0084572 3300049571 Bacteria 3174
159 Ga0501036_0013575 3300049572 Bacteria 6770
160 Ga0501036_0017882 3300049572 Bacteria 5934
161 Ga0501037_0000829 3300049573 Bacteria 23083
162 Ga0501038_0049916 3300049574 Bacteria 3616
163 Ga0501038_0082323 3300049574 Bacteria 2710
164 Ga0501039_0028012 3300049575 Bacteria 4334
165 Ga0501039_0095191 3300049575 Bacteria 2322
166 Ga0501041_0000324 3300049577 Bacteria 23255
167 Ga0501041_0026320 3300049577 Bacteria 3499
168 Ga0501042_0014960 3300049578 Bacteria 5304
169 Ga0501043_0000676 3300049579 Bacteria 30011
170 Ga0501043_0009370 3300049579 Bacteria 7690
171 Ga0501043_0013401 3300049579 Bacteria 6411
172 Ga0501046_0011680 3300049580 Bacteria 7506
173 Ga0501047_0001294 3300049581 Bacteria 24700
174 Ga0501047_0015688 3300049581 Bacteria 7218
175 Ga0501047_0052978 3300049581 Bacteria 3922
176 Ga0501048_0108452 3300049582 Bacteria 1960
177 Ga0501068_0004851 3300049584 Bacteria 7324
178 Ga0501069_0019040 3300049585 Bacteria 3708
179 Ga0501070_0042472 3300049586 Bacteria 3787
180 Ga0501071_0000976 3300049587 Bacteria 15635
181 Ga0501072_0000664 3300049588 Bacteria 24821
182 Ga0501072_0155671 3300049588 Bacteria 1822
183 Ga0501073_0036426 3300049589 Bacteria 3495
184 Ga0501077_0020667 3300049593 Bacteria 4168
185 Ga0501079_0011231 3300049741 Bacteria 6830
186 Ga0501080_0018043 3300049742 Bacteria 6533
187 Ga0501083_0000742 3300049744 Bacteria 21310
188 Ga0501035_0001216 3300049822 Bacteria 26831
189 Ga0501044_0001566 3300049823 Bacteria 26801
190 Ga0501044_0024762 3300049823 Bacteria 6367
191 Ga0501045_0063904 3300049824 Bacteria 2701
192 nmdc:mga05p37_31624_c1 3300050507 Bacteria 6466
193 nmdc:mga05p37_815_c1 3300050507 Bacteria 34870
194 nmdc:mga09592_15644_c1 3300050508 Bacteria 6199
195 nmdc:mga09592_260271_c1 3300050508 Bacteria 1504
196 nmdc:mga09592_85821_c1 3300050508 Bacteria 2685
197 nmdc:mga0qj67_34922_c1 3300050509 Bacteria 3929
198 nmdc:mga0qj67_5282_c1 3300050509 Bacteria 9420
199 nmdc:mga06r32_50214_c1 3300050510 Bacteria 3990
200 nmdc:mga06r32_555_c1 3300050510 Bacteria 32486
201 nmdc:mga06r32_80_c5 3300050510 Bacteria 7288
202 nmdc:mga08y16_18412_c1 3300050511 Bacteria 7362
203 Ga0495601_0006148 3300053077 Bacteria 7005
204 Ga0495601_0010976 3300053077 Bacteria 5409
205 Ga0495601_0101814 3300053077 Bacteria 1855
206 Ga0500641_0030919 3300053096 Bacteria 2108
207 Ga0500650_0032043 3300053098 Bacteria 2393
208 Ga0500594_0005461 3300053118 Bacteria 2821
209 Ga0500559_0043025 3300053136 Bacteria 1972
210 Ga0500600_0074600 3300053149 Bacteria 1850
211 Ga0501084_0023566 3300054114 Bacteria 5133
212 Ga0501082_0227672 3300060353 Bacteria 1623
213 Ga0466962_0000133 3300061719 Bacteria 30437
214 Ga0530510_0126880 3300061734 Bacteria 1876
215 2501942785 2501939600 Bacteria 6907073
216 2585297746 2582581312 Bacteria 7308206
217 2616902737 2616644941 Bacteria 8510691
218 2643764433 2643221548 Bacteria 8053412
219 2644015972 2643221601 Bacteria 7493239
220 2644176776 2643221631 Bacteria 8168043
221 2644403168 2643221673 Bacteria 9196637
222 2644458508 2643221682 Bacteria 6743283
223 2744956697 2744054611 Bacteria 5611514
224 2753268975 2751185782 Bacteria 11227053
225 2768645311 2767802112 Bacteria 6465194
226 2809591715 2808606522 Bacteria 9488490
227 2819699323 2818991463 Bacteria 7948711
228 2819746698 2818991472 Bacteria 10089953
229 2831936647 2831935698 Bacteria 5963223
230 2832008499 2832004796 Bacteria 6538017
231 2856862009 2856858025 Bacteria 7255264
232 2858874859 2858868258 Bacteria 7683772
233 2866065290 2866065130 Bacteria 6518152
234 2867307819 2867302475 Bacteria 7087181
235 2867348316 2867346516 Bacteria 7608576
236 2867508603 2867507094 Bacteria 6506033
237 2899371749 2899370129 Bacteria 6781179
238 2902586695 2902582711 Bacteria 6187705
239 2912758538 2912757875 Bacteria 7940295
240 2946052258 2946045630 Bacteria 8527308
241 2966604669 2966598605 Bacteria 7676064
242 2990091827 2990088156 Bacteria 6657676
243 2995470806 2995463766 Bacteria 8577691
244 2997600864 2997600082 Bacteria 9896405
245 3006324478 3006321560 Bacteria 8247479
246 649812609 649633069 Bacteria 6962533
247 8001786830 8001781756 Bacteria 9586736
248 8003875658 8003870546 Bacteria 7396674
249 8025480636 8025478263 Bacteria 8209203
250 8048134808 8048127548 Bacteria 11053136
251 8054164260 8054160619 Bacteria 7783213
252 8055413697 8055412473 Bacteria 6257500
253 8056448043 8056447290 Bacteria 7680491
254 8056668754 8056667051 Bacteria 6953971
255 Ga0105033_100422
256 rootH1_10036630
257 Ga0070668_100000250
258 Ga0070667_100014345
259 Ga0070714_100008421
260 Ga0070710_10024731
261 Ga0070711_100005354
262 Ga0070681_10004128
263 Ga0070706_100086510
264 Ga0070695_100070522
265 Ga0070696_100025150
266 Ga0070704_100080111
267 Ga0081455_10000155
268 Ga0081455_10096213
269 Ga0081540_1069739
270 Ga0081539_10000873
271 Ga0081539_10001256
272 Ga0081539_10001767
273 Ga0081539_10003509
274 Ga0081539_10006066
275 Ga0081539_10047982
276 Ga0075365_10074041
277 Ga0075428_100189066
278 Ga0075430_100012368
279 Ga0075430_100016471
280 Ga0075431_100002978
281 Ga0075431_100025758
282 Ga0075431_100055315
283 Ga0075429_100008577
284 Ga0111539_10039301
285 Ga0114129_10000130
286 Ga0114129_10002267
287 Ga0105238_10033445
288 Ga0207692_10020044
289 Ga0207705_10123734
290 Ga0207663_10003516
291 Ga0207700_10003198
292 Ga0207664_10011254
293 Ga0207668_10002345
294 Ga0207658_10007497
295 Ga0207428_10020037
296 Ga0268266_10129800
297 Ga0307515_10000182
298 Ga0307515_10007109
299 Ga0307515_10026197
300 Ga0265338_10020230
301 Ga0307512_10009848
302 Ga0307512_10030885
303 Ga0265320_10027936
304 Ga0265327_10003624
305 Ga0265327_10011609
306 Ga0307509_10029912
307 Ga0307509_10063609
308 Ga0307508_10001109
309 Ga0307508_10048263
310 Ga0307508_10050285
311 Ga0307508_10145854
312 Ga0265314_10015899
313 Ga0307516_10000395
314 Ga0307516_10007781
315 Ga0307413_10000341
316 Ga0326468_10001452
317 Ga0307406_10005185
318 Ga0307416_100032706
319 Ga0307415_100042813
320 Ga0307415_100054965
321 Ga0307507_10000113
322 Ga0307507_10072327
323 Ga0307507_10110776
324 Ga0373948_0002830
325 Ga0373951_0000654
326 Ga0373939_0032377
327 Ga0373942_0000028
328 Ga0395899_0009043
329 Ga0395900_0035060
330 Ga0395900_0113281
331 Ga0395900_0171546
332 Ga0395898_0016998
333 Ga0395898_0021439
334 Ga0395898_0070565
335 Ga0395905_0113772
336 Ga0436364_0382334
337 Ga0395901_0032627
338 Ga0439465_0028852
339 Ga0451853_0199114
340 Ga0466969_0002552
341 Ga0466969_0003452
342 Ga0466969_0006586
343 Ga0466965_0086088
344 Ga0466966_0009858
345 Ga0466966_0025032
346 Ga0466966_0030264
347 Ga0466961_0002024
348 Ga0466961_0105304
349 Ga0466971_0017952
350 Ga0466957_0037560
351 Ga0466957_0171652
352 Ga0466960_0048696
353 Ga0466959_0024297
354 Ga0466959_0081506
355 Ga0466959_0105265
356 Ga0466958_0002108
357 Ga0466967_0003612
358 Ga0495603_0001264
359 Ga0495629_0002664
360 Ga0495629_0004892
361 Ga0495651_0007252
362 Ga0495653_0001046
363 Ga0495662_0008941
364 Ga0495664_0007228
365 Ga0495608_0000593
366 Ga0495618_0024668
367 Ga0495628_0188126
368 Ga0495666_0003101
369 Ga0495652_0003400
370 Ga0495652_0020177
371 Ga0495665_0013574
372 Ga0495640_0019085
373 Ga0495586_0012110
374 Ga0495645_0032634
375 Ga0495622_0006568
376 Ga0495668_0000477
377 Ga0495634_0009913
378 Ga0495635_0014956
379 Ga0495635_0030732
380 Ga0495588_0010001
381 Ga0495657_0000011
382 Ga0495657_0012533
383 Ga0495599_0010578
384 Ga0495623_0079379
385 Ga0495646_0063537
386 Ga0495613_0000322
387 Ga0495613_0002600
388 Ga0495613_0146198
389 Ga0495600_0059810
390 Ga0495600_0060062
391 Ga0495604_0000172
392 Ga0495672_0004989
393 Ga0495676_0001163
394 Ga0495676_0006543
395 Ga0495675_0021141
396 Ga0495684_0005669
397 Ga0495593_0012941
398 Ga0495602_0020415
399 Ga0495614_0002494
400 Ga0496101_0001296
401 Ga0496108_0000115
402 Ga0501031_0001432
403 Ga0501031_0081823
404 Ga0501031_0120087
405 Ga0501032_0000859
406 Ga0501032_0036527
407 Ga0501032_0074111
408 Ga0501033_0054008
409 Ga0501033_0083430
410 Ga0501034_0021716
411 Ga0501034_0084572
412 Ga0501036_0013575
413 Ga0501036_0017882
414 Ga0501037_0000829
415 Ga0501038_0049916
416 Ga0501038_0082323
417 Ga0501039_0028012
418 Ga0501039_0095191
419 Ga0501041_0000324
420 Ga0501041_0026320
421 Ga0501042_0014960
422 Ga0501043_0000676
423 Ga0501043_0009370
424 Ga0501043_0013401
425 Ga0501046_0011680
426 Ga0501047_0001294
427 Ga0501047_0015688
428 Ga0501047_0052978
429 Ga0501048_0108452
430 Ga0501068_0004851
431 Ga0501069_0019040
432 Ga0501070_0042472
433 Ga0501071_0000976
434 Ga0501072_0000664
435 Ga0501072_0155671
436 Ga0501073_0036426
437 Ga0501077_0020667
438 Ga0501079_0011231
439 Ga0501080_0018043
440 Ga0501083_0000742
441 Ga0501035_0001216
442 Ga0501044_0001566
443 Ga0501044_0024762
444 Ga0501045_0063904
445 nmdc:mga05p37_31624_c1
446 nmdc:mga05p37_815_c1
447 nmdc:mga09592_15644_c1
448 nmdc:mga09592_260271_c1
449 nmdc:mga09592_85821_c1
450 nmdc:mga0qj67_34922_c1
451 nmdc:mga0qj67_5282_c1
452 nmdc:mga06r32_50214_c1
453 nmdc:mga06r32_555_c1
454 nmdc:mga06r32_80_c5
455 nmdc:mga08y16_18412_c1
456 Ga0495601_0006148
457 Ga0495601_0010976
458 Ga0495601_0101814
459 Ga0500641_0030919
460 Ga0500650_0032043
461 Ga0500594_0005461
462 Ga0500559_0043025
463 Ga0500600_0074600
464 Ga0501084_0023566
465 Ga0501082_0227672
466 Ga0466962_0000133
467 Ga0530510_0126880
468 2501942785
469 2585297746
470 2616902737
471 2643764433
472 2644015972
473 2644176776
474 2644403168
475 2644458508
476 2744956697
477 2753268975
478 2768645311
479 2809591715
480 2819699323
481 2819746698
482 2831936647
483 2832008499
484 2856862009
485 2858874859
486 2866065290
487 2867307819
488 2867348316
489 2867508603
490 2899371749
491 2902586695
492 2912758538
493 2946052258
494 2966604669
495 2990091827
496 2995470806
497 2997600864
498 3006324478
499 649812609
500 8001786830
501 8003875658
502 8025480636
503 8048134808
504 8054164260
505 8055413697
506 8056448043
507 8056668754

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00202

Aminotran_3

Aminotransferase class-III

45

449

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
4cxq-assembly1.cif.gz_B mycobaterium tuberculosis transaminase bioa complexed with substrate kapa 0.9662 11 410
4cxq-assembly1.cif.gz_A mycobaterium tuberculosis transaminase bioa complexed with substrate kapa 0.9623 11 410
5kgt-assembly1.cif.gz_B crystal structure of 7,8-diaminopelargonic acid synthase (bioa) from mycobacterium tuberculosis, complexed with an inhibitor optimized from hts lead: 1-[4-[4-(3-chlorophenyl)carbonylpiperidin-1-yl]phenyl]ethanone 0.9598 13 414
3tft-assembly1.cif.gz_A crystal structure of 7,8-diaminopelargonic acid synthase (bioa) from mycobacterium tuberculosis, pre-reaction complex with a 3,6-dihydropyrid-2-one heterocycle inhibitor 0.9597 11 414
6ed7-assembly3.cif.gz_E crystal structure of 7,8-diaminopelargonic acid synthase bound to inhibitor mac13772 0.9586 10 411
ID Description Score Start End Superfamily
1mgvA02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9621 69 335 3.40.640.10
1mgvA02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9482 69 335 3.40.640.10
af_P50277_75_373_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9394 70 335 3.40.640.10
4w1vB01 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9275 336 410 3.90.1150.10
4addA02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9251 69 332 3.40.640.10
ID Description Score Start End GO Terms
AF-A0A4D4M6R6-F1-model_v4 ATP-dependent dethiobiotin synthetase BioD (EC 6.3.3.3) (DTB synthetase) (DTBS) (Dethiobiotin synthase) 0.9819 10 317 GO:0000287
GO:0004015
GO:0004141
GO:0005524
GO:0005737
GO:0009102
GO:0030170
AF-A0A846FK24-F1-model_v4 deleted 0.9749 11 331
AF-A0A661F9W8-F1-model_v4 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) (7,8-diamino-pelargonic acid aminotransferase) (DAPA AT) (DAPA aminotransferase) (7,8-diaminononanoate synthase) (DANS) (Diaminopelargonic acid synthase) 0.9678 8 412 GO:0004015
GO:0005737
GO:0009102
GO:0030170
AF-A0A2V2H0L5-F1-model_v4 deleted 0.9677 11 409
AF-A0A661P9R5-F1-model_v4 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) (7,8-diamino-pelargonic acid aminotransferase) (DAPA AT) (DAPA aminotransferase) (7,8-diaminononanoate synthase) (DANS) (Diaminopelargonic acid synthase) 0.9675 32 410 GO:0004015
GO:0005737
GO:0009102
GO:0030170

Map