F363064

General Info

Members Datasets Scaffolds Average Seq Length
252 173 504 281

Family's Representative Sequence

Representative Sequence 3300005468|Ga0070707_100017173|Ga0070707_1000171733
Length 318
Sequence VRAALYAGMTTTIFWPFNIALVEYAPTLQLATWMIIFHDARCTEYSAPGHSERPARITRTVPLLKDRHPKWQWHQPHSATEEQLVRAHSREHITRIKTAAHDFDADTPVYPQIYEHALRSAGAAINVAQTALAGERAFSLMRPPGHHATRDRAMGFCYFSNIAIAALDALQRGTHRVAIWDFDAHHGNGTEAIVLHDPRVAFASIHQFPAYPGTGTRSFTNIDNYPVAPFTPRAKHVDVAKRALDKLLAIEPTLLLVSAGFDAYARDPLVQMTLEREDFAAFGEWLQNIDIPIAGLLEGGYSDDLPELIDAFLTAWVA

Samples

Sample ID Description Type Environment
1 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
2 3300001430 Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
5 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
6 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
7 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
8 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
9 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
10 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
11 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
19 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
20 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
21 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
22 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
23 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
24 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
25 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
26 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
27 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
28 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
29 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
30 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
31 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
32 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
33 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
34 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
35 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
36 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
37 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
38 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
39 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
40 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
41 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
42 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
43 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
44 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
45 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
46 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
47 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
48 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
49 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
50 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
51 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
52 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
53 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
54 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
55 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
56 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
57 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
58 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
59 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
60 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
61 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
62 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
63 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
64 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
65 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
66 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
67 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
68 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
69 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
70 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
71 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
72 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
73 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
74 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
75 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
76 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
77 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
78 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
79 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
80 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
81 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
82 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
83 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
84 3300025271 Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025290 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (version 2) Metagenome Rhizosphere
86 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
116 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
117 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
118 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
119 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
120 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
121 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
122 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
123 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
124 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
125 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
126 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
127 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
128 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
129 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
130 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
131 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
132 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
133 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
134 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
135 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
136 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
137 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
138 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
139 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
140 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
141 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
142 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
143 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
144 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
145 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
146 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
147 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
148 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
149 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
150 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
151 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
152 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
153 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
154 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
155 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
156 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
157 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
158 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
159 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
160 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
161 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
162 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
163 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
164 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
165 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
166 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
167 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
168 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
169 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
170 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
171 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
172 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
173 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 3.97
Rhizosphere 94.84
Stem 0
Stem Tuber 0
Unclassified 14.29

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070707_100017173 3300005468 Bacteria 6801
2 JGI24032J14994_101223 3300001430 Unclassified 1132
3 JGI25406J46586_10000001 3300003203 Bacteria 251772
4 JGI25405J52794_10001961 3300003911 Bacteria 3487
5 Ga0065704_10012558 3300005289 Bacteria 2288
6 Ga0065704_10012565 3300005289 Bacteria 2453
7 Ga0065712_10071730 3300005290 Bacteria 5092
8 Ga0065715_10153606 3300005293 Bacteria 1701
9 Ga0070658_10031537 3300005327 Unclassified 4257
10 Ga0070658_10310735 3300005327 Bacteria 1345
11 Ga0070676_10098243 3300005328 Bacteria 1805
12 Ga0070690_100010599 3300005330 Bacteria 5369
13 Ga0070666_10017917 3300005335 Bacteria 4544
14 Ga0070666_10094244 3300005335 Bacteria 2059
15 Ga0070689_100017033 3300005340 Bacteria 5330
16 Ga0070689_100187663 3300005340 Bacteria 1682
17 Ga0070689_100247452 3300005340 Bacteria 1470
18 Ga0070691_10068411 3300005341 Bacteria 1719
19 Ga0070661_100167363 3300005344 Bacteria 1668
20 Ga0070668_100108613 3300005347 Unclassified 2207
21 Ga0070675_100164587 3300005354 Bacteria 1909
22 Ga0070675_100218139 3300005354 Bacteria 1660
23 Ga0070675_100369615 3300005354 Unclassified 1275
24 Ga0070671_100120167 3300005355 Bacteria 2210
25 Ga0070671_100386422 3300005355 Unclassified 1196
26 Ga0070688_100002909 3300005365 Bacteria 8734
27 Ga0070688_100004785 3300005365 Bacteria 7076
28 Ga0070667_100078567 3300005367 Bacteria 2819
29 Ga0070709_10042907 3300005434 Bacteria 2795
30 Ga0070714_100035103 3300005435 Bacteria 4201
31 Ga0070714_100176881 3300005435 Bacteria 1939
32 Ga0070713_100050965 3300005436 Unclassified 3422
33 Ga0070713_100111984 3300005436 Bacteria 2381
34 Ga0070710_10185435 3300005437 Unclassified 1305
35 Ga0070705_100007471 3300005440 Bacteria 5379
36 Ga0070708_100094090 3300005445 Bacteria 2733
37 Ga0070708_100203429 3300005445 Unclassified 1854
38 Ga0070708_100236448 3300005445 Bacteria 1715
39 Ga0070678_100013354 3300005456 Bacteria 5145
40 Ga0070678_100107901 3300005456 Bacteria 2172
41 Ga0070662_100290692 3300005457 Unclassified 1325
42 Ga0068867_100334186 3300005459 Unclassified 1259
43 Ga0070685_10009382 3300005466 Bacteria 5054
44 Ga0070685_10037973 3300005466 Bacteria 2729
45 Ga0070706_100069267 3300005467 Bacteria 3263
46 Ga0070706_100169970 3300005467 Bacteria 2035
47 Ga0070706_100477646 3300005467 Bacteria 1160
48 Ga0070707_100027930 3300005468 Bacteria 5367
49 Ga0070698_100009035 3300005471 Bacteria 10715
50 Ga0070698_100356045 3300005471 Unclassified 1395
51 Ga0070699_100126031 3300005518 Bacteria 2254
52 Ga0070697_100001513 3300005536 Bacteria 17656
53 Ga0070697_100009878 3300005536 Bacteria 7443
54 Ga0070697_100169163 3300005536 Bacteria 1849
55 Ga0070697_100279234 3300005536 Bacteria 1433
56 Ga0068853_100225779 3300005539 Bacteria 1712
57 Ga0070672_100038519 3300005543 Bacteria 3654
58 Ga0070672_100168856 3300005543 Unclassified 1818
59 Ga0070695_100200402 3300005545 Bacteria 1426
60 Ga0070696_100411180 3300005546 Bacteria 1060
61 Ga0070665_100016165 3300005548 Bacteria 7488
62 Ga0070704_100043782 3300005549 Bacteria 3105
63 Ga0068855_100369076 3300005563 Bacteria 1578
64 Ga0068855_100373388 3300005563 Bacteria 1567
65 Ga0068855_100439064 3300005563 Bacteria 1426
66 Ga0068855_100507576 3300005563 Bacteria 1310
67 Ga0070664_100272258 3300005564 Bacteria 1525
68 Ga0068857_100262218 3300005577 Bacteria 1586
69 Ga0068856_100010031 3300005614 Bacteria 9198
70 Ga0070702_100225084 3300005615 Bacteria 1257
71 Ga0068859_100006815 3300005617 Bacteria 11608
72 Ga0068864_100123592 3300005618 Unclassified 2317
73 Ga0068858_100319056 3300005842 Bacteria 1485
74 Ga0068860_100667198 3300005843 Unclassified 1048
75 Ga0081455_10009017 3300005937 Bacteria 10297
76 Ga0081455_10169214 3300005937 Bacteria 1666
77 Ga0081540_1000196 3300005983 Bacteria 62801
78 Ga0081539_10000014 3300005985 Bacteria 411270
79 Ga0081539_10097758 3300005985 Bacteria 1503
80 Ga0081539_10131529 3300005985 Bacteria 1228
81 Ga0070717_10000397 3300006028 Bacteria 27886
82 Ga0070717_10013485 3300006028 Bacteria 6264
83 Ga0070717_10180827 3300006028 Bacteria 1838
84 Ga0070717_10557521 3300006028 Bacteria 1038
85 Ga0070716_100184366 3300006173 Bacteria 1373
86 Ga0070716_100330812 3300006173 Bacteria 1071
87 Ga0070712_100014948 3300006175 Bacteria 4990
88 Ga0070712_100028472 3300006175 Bacteria 3737
89 Ga0070712_100081317 3300006175 Bacteria 2347
90 Ga0070712_100257353 3300006175 Bacteria 1397
91 Ga0097621_100018492 3300006237 Bacteria 5326
92 Ga0097621_100294296 3300006237 Bacteria 1432
93 Ga0075434_100388396 3300006871 Bacteria 1417
94 Ga0075429_100175321 3300006880 Bacteria 1878
95 Ga0068865_100060673 3300006881 Bacteria 2649
96 Ga0097620_100006816 3300006931 Bacteria 11608
97 Ga0075435_100111256 3300007076 Unclassified 2278
98 Ga0105240_10078972 3300009093 Bacteria 4051
99 Ga0105240_10090432 3300009093 Bacteria 3741
100 Ga0111539_10122727 3300009094 Bacteria 3045
101 Ga0105245_10040241 3300009098 Unclassified 4163
102 Ga0114129_10022815 3300009147 Bacteria 8873
103 Ga0105242_10104962 3300009176 Bacteria 2399
104 Ga0105248_10123052 3300009177 Bacteria 2926
105 Ga0105248_10218097 3300009177 Bacteria 2148
106 Ga0105238_10043870 3300009551 Bacteria 4523
107 Ga0105238_10154441 3300009551 Bacteria 2270
108 Ga0105249_10237747 3300009553 Bacteria 1799
109 Ga0105239_10147251 3300010375 Bacteria 2627
110 Ga0157370_10010863 3300013104 Bacteria 9563
111 Ga0157374_10020469 3300013296 Bacteria 5869
112 Ga0157374_10023158 3300013296 Bacteria 5550
113 Ga0157374_10199620 3300013296 Bacteria 1958
114 Ga0157374_10459174 3300013296 Bacteria 1276
115 Ga0157374_10532895 3300013296 Unclassified 1181
116 Ga0157378_10012934 3300013297 Bacteria 7301
117 Ga0157378_10063362 3300013297 Bacteria 3303
118 Ga0163162_10043557 3300013306 Bacteria 4494
119 Ga0157372_10616644 3300013307 Unclassified 1264
120 Ga0157375_10000045 3300013308 Bacteria 151387
121 Ga0157375_10016678 3300013308 Bacteria 6607
122 Ga0157375_10265061 3300013308 Bacteria 1880
123 Ga0163163_10000050 3300014325 Bacteria 128713
124 Ga0163163_10248531 3300014325 Bacteria 1829
125 Ga0157377_10149944 3300014745 Unclassified 1441
126 Ga0157376_10026954 3300014969 Bacteria 4549
127 Ga0182005_1011645 3300015265 Bacteria 2503
128 Ga0163161_10082202 3300017792 Bacteria 2373
129 Ga0213872_10041717 3300021361 Bacteria 2093
130 Ga0213872_10070246 3300021361 Bacteria 1579
131 Ga0213876_10001419 3300021384 Bacteria 14923
132 Ga0213871_10001072 3300021441 Bacteria 4326
133 Ga0213871_10040023 3300021441 Bacteria 1256
134 Ga0207666_1000273 3300025271 Bacteria 7372
135 Ga0207673_1000449 3300025290 Bacteria 4269
136 Ga0207697_10001772 3300025315 Bacteria 11580
137 Ga0207697_10005696 3300025315 Bacteria 5746
138 Ga0207697_10009893 3300025315 Bacteria 4099
139 Ga0207688_10071569 3300025901 Bacteria 1969
140 Ga0207680_10017815 3300025903 Bacteria 3761
141 Ga0207645_10002735 3300025907 Bacteria 13734
142 Ga0207684_10004342 3300025910 Bacteria 13389
143 Ga0207684_10014793 3300025910 Bacteria 6718
144 Ga0207684_10042184 3300025910 Bacteria 3867
145 Ga0207684_10411197 3300025910 Bacteria 1163
146 Ga0207695_10076049 3300025913 Bacteria 3414
147 Ga0207693_10005201 3300025915 Bacteria 10893
148 Ga0207693_10018554 3300025915 Bacteria 5539
149 Ga0207649_10135567 3300025920 Bacteria 1678
150 Ga0207646_10003781 3300025922 Bacteria 16850
151 Ga0207646_10026498 3300025922 Bacteria 5289
152 Ga0207646_10261839 3300025922 Unclassified 1563
153 Ga0207681_10173280 3300025923 Bacteria 1637
154 Ga0207694_10193772 3300025924 Bacteria 1652
155 Ga0207659_10198348 3300025926 Bacteria 1601
156 Ga0207687_10471567 3300025927 Unclassified 1044
157 Ga0207700_10014408 3300025928 Bacteria 5181
158 Ga0207700_10145818 3300025928 Bacteria 1951
159 Ga0207664_10193224 3300025929 Bacteria 1753
160 Ga0207644_10014007 3300025931 Bacteria 5360
161 Ga0207644_10275983 3300025931 Unclassified 1348
162 Ga0207706_10046088 3300025933 Bacteria 3861
163 Ga0207706_10094671 3300025933 Bacteria 2627
164 Ga0207670_10003082 3300025936 Bacteria 8807
165 Ga0207670_10213547 3300025936 Bacteria 1473
166 Ga0207704_10070714 3300025938 Bacteria 2211
167 Ga0207665_10029150 3300025939 Bacteria 3649
168 Ga0207691_10008426 3300025940 Bacteria 9902
169 Ga0207667_10160781 3300025949 Bacteria 2310
170 Ga0207667_10273711 3300025949 Bacteria 1726
171 Ga0207667_10296139 3300025949 Bacteria 1653
172 Ga0207651_10016111 3300025960 Bacteria 4367
173 Ga0207712_10344333 3300025961 Bacteria 1237
174 Ga0207703_10607988 3300026035 Bacteria 1034
175 Ga0207702_10314770 3300026078 Bacteria 1489
176 Ga0207702_10329872 3300026078 Bacteria 1455
177 Ga0207676_10420202 3300026095 Bacteria 1254
178 Ga0207674_10287685 3300026116 Bacteria 1592
179 Ga0207683_10025305 3300026121 Bacteria 5119
180 Ga0209974_10028418 3300027876 Bacteria 1852
181 Ga0265337_1005550 3300028556 Bacteria 5001
182 Ga0265326_10034563 3300028558 Bacteria 1438
183 Ga0265334_10089882 3300028573 Bacteria 1121
184 Ga0265336_10018336 3300028666 Bacteria 2269
185 Ga0265338_10000202 3300028800 Bacteria 112706
186 Ga0265338_10002556 3300028800 Bacteria 26927
187 Ga0265338_10039566 3300028800 Bacteria 4445
188 Ga0265338_10172814 3300028800 Bacteria 1655
189 Ga0265324_10001276 3300029957 Bacteria 14807
190 Ga0265320_10000363 3300031240 Bacteria 36831
191 Ga0265320_10022268 3300031240 Bacteria 3392
192 Ga0373954_0072201 3300035118 Unclassified 1641
193 Ga0373956_0116177 3300035119 Unclassified 1248
194 Ga0373946_0115019 3300035171 Bacteria 1222
195 Ga0373924_0116340 3300035410 Bacteria 1158
196 Ga0373935_0037933 3300035692 Bacteria 3016
197 Ga0373933_0118255 3300035724 Unclassified 1658
198 Ga0373933_0175001 3300035724 Bacteria 1367
199 Ga0373947_0114000 3300035725 Unclassified 1711
200 Ga0373937_0266902 3300036401 Bacteria 1615
201 Ga0373925_0170598 3300037068 Unclassified 1718
202 Ga0373925_0323667 3300037068 Unclassified 1248
203 Ga0395899_0091303 3300037312 Bacteria 2207
204 Ga0395900_0001895 3300037418 Bacteria 23792
205 Ga0395898_0003099 3300037466 Bacteria 18810
206 Ga0395905_0017074 3300037471 Bacteria 6892
207 Ga0436364_0727260 3300037853 Bacteria 1409
208 Ga0395901_0000371 3300038443 Bacteria 53982
209 Ga0436365_1232266 3300039437 Bacteria 54125
210 Ga0436360_0280138 3300039438 Bacteria 1717
211 Ga0436360_0551204 3300039438 Bacteria 8734
212 Ga0436360_1356282 3300039438 Unclassified 3517
213 Ga0436361_0020825 3300039447 Bacteria 4556
214 Ga0436361_0224401 3300039447 Bacteria 2225
215 Ga0436361_0277762 3300039447 Bacteria 2335
216 Ga0436361_0309957 3300039447 Unclassified 1583
217 Ga0436361_0940395 3300039447 Bacteria 2767
218 Ga0436362_0198674 3300039453 Unclassified 2177
219 Ga0451577_0072403 3300042876 Bacteria 3074
220 Ga0495592_0047224 3300046454 Bacteria 3207
221 Ga0495651_0146415 3300046462 Bacteria 1707
222 Ga0495580_0336813 3300046472 Unclassified 1024
223 Ga0495664_0060939 3300046477 Bacteria 2247
224 Ga0495628_0047881 3300046516 Bacteria 3390
225 Ga0495630_0023668 3300046517 Bacteria 4541
226 Ga0495652_0117137 3300046529 Bacteria 2132
227 Ga0495586_0131485 3300046535 Bacteria 1401
228 Ga0495645_0148995 3300046543 Bacteria 1627
229 Ga0495645_0262053 3300046543 Bacteria 1144
230 Ga0495634_0161488 3300046642 Bacteria 1412
231 Ga0495635_0233254 3300046663 Unclassified 1243
232 Ga0495588_0249253 3300046674 Bacteria 936
233 Ga0495599_0012397 3300046678 Bacteria 5253
234 Ga0495599_0077135 3300046678 Unclassified 2080
235 Ga0495674_0012850 3300047319 Bacteria 7886
236 Ga0496100_0278835 3300048903 Bacteria 1245
237 Ga0496101_0010055 3300048904 Bacteria 6236
238 Ga0496102_0378348 3300048905 Bacteria 1332
239 Ga0496103_0060264 3300048906 Bacteria 2359
240 Ga0496106_0082607 3300048909 Unclassified 2469
241 Ga0496107_0030147 3300048910 Unclassified 3865
242 Ga0496108_0144528 3300048911 Bacteria 2050
243 Ga0496112_0006949 3300048915 Bacteria 9990
244 Ga0496113_0190549 3300048916 Bacteria 1628
245 Ga0496115_0007335 3300048918 Bacteria 8111
246 Ga0501033_0107996 3300049570 Bacteria 2027
247 Ga0501034_0101831 3300049571 Bacteria 2866
248 Ga0501047_0020756 3300049581 Bacteria 6310
249 Ga0501035_0009941 3300049822 Bacteria 8834
250 nmdc:mga05p37_78204_c1 3300050507 Bacteria 4073
251 nmdc:mga09592_232095_c1 3300050508 Bacteria 1599
252 nmdc:mga08y16_540406_c1 3300050511 Bacteria 1180
253 Ga0070707_100017173
254 JGI24032J14994_101223
255 JGI25406J46586_10000001
256 JGI25405J52794_10001961
257 Ga0065704_10012558
258 Ga0065704_10012565
259 Ga0065712_10071730
260 Ga0065715_10153606
261 Ga0070658_10031537
262 Ga0070658_10310735
263 Ga0070676_10098243
264 Ga0070690_100010599
265 Ga0070666_10017917
266 Ga0070666_10094244
267 Ga0070689_100017033
268 Ga0070689_100187663
269 Ga0070689_100247452
270 Ga0070691_10068411
271 Ga0070661_100167363
272 Ga0070668_100108613
273 Ga0070675_100164587
274 Ga0070675_100218139
275 Ga0070675_100369615
276 Ga0070671_100120167
277 Ga0070671_100386422
278 Ga0070688_100002909
279 Ga0070688_100004785
280 Ga0070667_100078567
281 Ga0070709_10042907
282 Ga0070714_100035103
283 Ga0070714_100176881
284 Ga0070713_100050965
285 Ga0070713_100111984
286 Ga0070710_10185435
287 Ga0070705_100007471
288 Ga0070708_100094090
289 Ga0070708_100203429
290 Ga0070708_100236448
291 Ga0070678_100013354
292 Ga0070678_100107901
293 Ga0070662_100290692
294 Ga0068867_100334186
295 Ga0070685_10009382
296 Ga0070685_10037973
297 Ga0070706_100069267
298 Ga0070706_100169970
299 Ga0070706_100477646
300 Ga0070707_100027930
301 Ga0070698_100009035
302 Ga0070698_100356045
303 Ga0070699_100126031
304 Ga0070697_100001513
305 Ga0070697_100009878
306 Ga0070697_100169163
307 Ga0070697_100279234
308 Ga0068853_100225779
309 Ga0070672_100038519
310 Ga0070672_100168856
311 Ga0070695_100200402
312 Ga0070696_100411180
313 Ga0070665_100016165
314 Ga0070704_100043782
315 Ga0068855_100369076
316 Ga0068855_100373388
317 Ga0068855_100439064
318 Ga0068855_100507576
319 Ga0070664_100272258
320 Ga0068857_100262218
321 Ga0068856_100010031
322 Ga0070702_100225084
323 Ga0068859_100006815
324 Ga0068864_100123592
325 Ga0068858_100319056
326 Ga0068860_100667198
327 Ga0081455_10009017
328 Ga0081455_10169214
329 Ga0081540_1000196
330 Ga0081539_10000014
331 Ga0081539_10097758
332 Ga0081539_10131529
333 Ga0070717_10000397
334 Ga0070717_10013485
335 Ga0070717_10180827
336 Ga0070717_10557521
337 Ga0070716_100184366
338 Ga0070716_100330812
339 Ga0070712_100014948
340 Ga0070712_100028472
341 Ga0070712_100081317
342 Ga0070712_100257353
343 Ga0097621_100018492
344 Ga0097621_100294296
345 Ga0075434_100388396
346 Ga0075429_100175321
347 Ga0068865_100060673
348 Ga0097620_100006816
349 Ga0075435_100111256
350 Ga0105240_10078972
351 Ga0105240_10090432
352 Ga0111539_10122727
353 Ga0105245_10040241
354 Ga0114129_10022815
355 Ga0105242_10104962
356 Ga0105248_10123052
357 Ga0105248_10218097
358 Ga0105238_10043870
359 Ga0105238_10154441
360 Ga0105249_10237747
361 Ga0105239_10147251
362 Ga0157370_10010863
363 Ga0157374_10020469
364 Ga0157374_10023158
365 Ga0157374_10199620
366 Ga0157374_10459174
367 Ga0157374_10532895
368 Ga0157378_10012934
369 Ga0157378_10063362
370 Ga0163162_10043557
371 Ga0157372_10616644
372 Ga0157375_10000045
373 Ga0157375_10016678
374 Ga0157375_10265061
375 Ga0163163_10000050
376 Ga0163163_10248531
377 Ga0157377_10149944
378 Ga0157376_10026954
379 Ga0182005_1011645
380 Ga0163161_10082202
381 Ga0213872_10041717
382 Ga0213872_10070246
383 Ga0213876_10001419
384 Ga0213871_10001072
385 Ga0213871_10040023
386 Ga0207666_1000273
387 Ga0207673_1000449
388 Ga0207697_10001772
389 Ga0207697_10005696
390 Ga0207697_10009893
391 Ga0207688_10071569
392 Ga0207680_10017815
393 Ga0207645_10002735
394 Ga0207684_10004342
395 Ga0207684_10014793
396 Ga0207684_10042184
397 Ga0207684_10411197
398 Ga0207695_10076049
399 Ga0207693_10005201
400 Ga0207693_10018554
401 Ga0207649_10135567
402 Ga0207646_10003781
403 Ga0207646_10026498
404 Ga0207646_10261839
405 Ga0207681_10173280
406 Ga0207694_10193772
407 Ga0207659_10198348
408 Ga0207687_10471567
409 Ga0207700_10014408
410 Ga0207700_10145818
411 Ga0207664_10193224
412 Ga0207644_10014007
413 Ga0207644_10275983
414 Ga0207706_10046088
415 Ga0207706_10094671
416 Ga0207670_10003082
417 Ga0207670_10213547
418 Ga0207704_10070714
419 Ga0207665_10029150
420 Ga0207691_10008426
421 Ga0207667_10160781
422 Ga0207667_10273711
423 Ga0207667_10296139
424 Ga0207651_10016111
425 Ga0207712_10344333
426 Ga0207703_10607988
427 Ga0207702_10314770
428 Ga0207702_10329872
429 Ga0207676_10420202
430 Ga0207674_10287685
431 Ga0207683_10025305
432 Ga0209974_10028418
433 Ga0265337_1005550
434 Ga0265326_10034563
435 Ga0265334_10089882
436 Ga0265336_10018336
437 Ga0265338_10000202
438 Ga0265338_10002556
439 Ga0265338_10039566
440 Ga0265338_10172814
441 Ga0265324_10001276
442 Ga0265320_10000363
443 Ga0265320_10022268
444 Ga0373954_0072201
445 Ga0373956_0116177
446 Ga0373946_0115019
447 Ga0373924_0116340
448 Ga0373935_0037933
449 Ga0373933_0118255
450 Ga0373933_0175001
451 Ga0373947_0114000
452 Ga0373937_0266902
453 Ga0373925_0170598
454 Ga0373925_0323667
455 Ga0395899_0091303
456 Ga0395900_0001895
457 Ga0395898_0003099
458 Ga0395905_0017074
459 Ga0436364_0727260
460 Ga0395901_0000371
461 Ga0436365_1232266
462 Ga0436360_0280138
463 Ga0436360_0551204
464 Ga0436360_1356282
465 Ga0436361_0020825
466 Ga0436361_0224401
467 Ga0436361_0277762
468 Ga0436361_0309957
469 Ga0436361_0940395
470 Ga0436362_0198674
471 Ga0451577_0072403
472 Ga0495592_0047224
473 Ga0495651_0146415
474 Ga0495580_0336813
475 Ga0495664_0060939
476 Ga0495628_0047881
477 Ga0495630_0023668
478 Ga0495652_0117137
479 Ga0495586_0131485
480 Ga0495645_0148995
481 Ga0495645_0262053
482 Ga0495634_0161488
483 Ga0495635_0233254
484 Ga0495588_0249253
485 Ga0495599_0012397
486 Ga0495599_0077135
487 Ga0495674_0012850
488 Ga0496100_0278835
489 Ga0496101_0010055
490 Ga0496102_0378348
491 Ga0496103_0060264
492 Ga0496106_0082607
493 Ga0496107_0030147
494 Ga0496108_0144528
495 Ga0496112_0006949
496 Ga0496113_0190549
497 Ga0496115_0007335
498 Ga0501033_0107996
499 Ga0501034_0101831
500 Ga0501047_0020756
501 Ga0501035_0009941
502 nmdc:mga05p37_78204_c1
503 nmdc:mga09592_232095_c1
504 nmdc:mga08y16_540406_c1

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00850

Hist_deacetyl

Histone deacetylase domain

50

316

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
3c0y-assembly1.cif.gz_A crystal structure of catalytic domain of human histone deacetylase hdac7 0.9057 2 267
5zop-assembly1.cif.gz_G crystal structure of histone deacetylase 4 (hdac4) in complex with a smrt corepressor sp2 fragment 0.9024 2 265
3c0y-assembly1.cif.gz_A crystal structure of catalytic domain of human histone deacetylase hdac7 0.8993 2 267
3zns-assembly1.cif.gz_A hdac7 bound with tfmo inhibitor tmp942 0.8983 2 267
3znr-assembly3.cif.gz_C hdac7 bound with inhibitor tmp269 0.8962 2 267
ID Description Score Start End Superfamily
5g1cA00 Alpha Beta;3-Layer(aba) Sandwich;Arginase; Chain A;Histone deacetylase domain 0.8956 1 267 3.40.800.20
5g1cA00 Alpha Beta;3-Layer(aba) Sandwich;Arginase; Chain A;Histone deacetylase domain 0.8925 1 267 3.40.800.20
af_Q60DG7_22_389_3.40.800.20 Alpha Beta;3-Layer(aba) Sandwich;Arginase; Chain A;Histone deacetylase domain 0.8856 2 264 3.40.800.20
3menC00 Alpha Beta;3-Layer(aba) Sandwich;Arginase; Chain A;Histone deacetylase domain 0.8813 1 264 3.40.800.20
af_A0A1D6FPJ8_20_295_3.40.800.20 Alpha Beta;3-Layer(aba) Sandwich;Arginase; Chain A;Histone deacetylase domain 0.8787 1 214 3.40.800.20
ID Description Score Start End GO Terms
AF-A0A2V5Z7Y4-F1-model_v4 Histone deacetylase 0.9968 1 135 GO:0004407
GO:0040029
AF-A0A2V5XQT4-F1-model_v4 Histone deacetylase 0.9919 1 152 GO:0004407
GO:0040029
AF-A0A2V5Z7Y4-F1-model_v4 Histone deacetylase 0.9895 1 135 GO:0004407
GO:0040029
AF-A0A2V5XQT4-F1-model_v4 Histone deacetylase 0.9855 1 152 GO:0004407
GO:0040029
AF-A0A2V6MJ42-F1-model_v4 Histone deacetylase 0.9728 1 155 GO:0004407
GO:0040029

Map