F362883

General Info

Members Datasets Scaffolds Average Seq Length
252 159 504 283

Family's Representative Sequence

Representative Sequence 3300002459|JGI24751J29686_10011159|JGI24751J29686_100111592
Length 306
Sequence MTMAQEMAQGSGLTAQEPAQERPIPAAPGFFASGLRVFDLSLSEMLWSRRTIFMILVVGAPVLIALFLRVLVALGAPILEGHRSTQGGGTETIRMAGPAIFGLMIWVFYLRFTVPVLGVFYGTALMADEVEDKTITYLFTRPVRRGAVLFGKYLAYLACTIFVVLPSVMLVYLLVVPLRGSLGGSFLDLVKDLALLALGLAVYGALFAFIGAKFKRPLLIGLIFIFGWEQGALAFPGYLKRFTIAYYIQGLVPHAMPSDSTISMIQGIFRESPSLFTSLVCLAVILAGFVSLAAWVVERREYVLEQ

Samples

Sample ID Description Type Environment
1 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
2 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
19 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
20 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
21 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
22 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
23 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
24 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
25 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
26 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
27 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
28 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
29 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
30 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
31 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
32 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
33 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
34 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
35 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
36 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
37 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
38 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
39 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
40 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
41 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
42 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
43 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
44 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
45 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
46 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
47 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
48 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
49 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
50 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
51 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
52 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
53 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
54 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
55 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
56 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
59 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
60 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
61 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
62 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
63 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
64 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
65 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
66 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
67 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
68 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
105 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
106 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
107 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
108 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
109 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
110 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
111 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
112 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
113 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
114 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
115 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
116 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
117 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
118 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
119 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
120 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
121 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
122 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
123 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
124 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
125 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
126 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
127 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
128 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
129 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
130 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
131 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
132 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
133 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
139 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
140 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
141 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
142 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
143 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
144 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
145 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
146 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
147 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
148 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
149 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
150 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
151 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
152 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
153 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
154 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
155 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
156 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
157 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
158 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
159 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.59
Nodule 0
Rhizoplane 3.57
Rhizosphere 94.84
Stem 0
Stem Tuber 0
Unclassified 13.49

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24751J29686_10011159 3300002459 Bacteria 1853
2 Ga0065704_10183906 3300005289 Unclassified 1223
3 Ga0065712_10070711 3300005290 Bacteria 5770
4 Ga0065712_10121227 3300005290 Bacteria 1660
5 Ga0065715_10008224 3300005293 Bacteria 2803
6 Ga0065715_10040798 3300005293 Bacteria 1012
7 Ga0065715_10093154 3300005293 Bacteria 4790
8 Ga0065715_10097397 3300005293 Bacteria 3712
9 Ga0065715_10201243 3300005293 Unclassified 1360
10 Ga0065715_10208789 3300005293 Bacteria 1324
11 Ga0065715_10233910 3300005293 Unclassified 1224
12 Ga0065707_10149304 3300005295 Bacteria 1676
13 Ga0070683_100007104 3300005329 Bacteria 9436
14 Ga0070690_100034249 3300005330 Bacteria 3182
15 Ga0070670_100006089 3300005331 Bacteria 10198
16 Ga0070670_100021238 3300005331 Bacteria 5586
17 Ga0070670_100027041 3300005331 Bacteria 4935
18 Ga0068869_100132492 3300005334 Bacteria 1917
19 Ga0070666_10059258 3300005335 Bacteria 2589
20 Ga0068868_100431394 3300005338 Unclassified 1143
21 Ga0070689_100018394 3300005340 Bacteria 5146
22 Ga0070689_100412743 3300005340 Unclassified 1143
23 Ga0070687_100033847 3300005343 Unclassified 2525
24 Ga0070661_100075651 3300005344 Bacteria 2481
25 Ga0070661_100194992 3300005344 Bacteria 1546
26 Ga0070669_100000449 3300005353 Bacteria 31407
27 Ga0070669_100449272 3300005353 Bacteria 1062
28 Ga0070675_100022379 3300005354 Bacteria 5051
29 Ga0070675_100115019 3300005354 Bacteria 2280
30 Ga0070675_100143399 3300005354 Bacteria 2043
31 Ga0070675_100180341 3300005354 Bacteria 1825
32 Ga0070671_100146821 3300005355 Bacteria 1991
33 Ga0070671_100426270 3300005355 Bacteria 1136
34 Ga0070673_100015302 3300005364 Bacteria 5383
35 Ga0070673_100055535 3300005364 Bacteria 3120
36 Ga0070673_100072153 3300005364 Bacteria 2776
37 Ga0070659_100129124 3300005366 Bacteria 2051
38 Ga0070713_100006723 3300005436 Bacteria 8005
39 Ga0070705_100052418 3300005440 Unclassified 2384
40 Ga0070700_100049832 3300005441 Bacteria 2601
41 Ga0070708_100565753 3300005445 Bacteria 1072
42 Ga0070663_100016028 3300005455 Bacteria 4854
43 Ga0070678_100017255 3300005456 Bacteria 4643
44 Ga0070678_100139450 3300005456 Unclassified 1938
45 Ga0070678_100525049 3300005456 Bacteria 1048
46 Ga0070662_100110945 3300005457 Bacteria 2089
47 Ga0070662_100145419 3300005457 Bacteria 1841
48 Ga0068867_100004667 3300005459 Bacteria 9639
49 Ga0070685_10150385 3300005466 Bacteria 1475
50 Ga0070685_10154714 3300005466 Bacteria 1456
51 Ga0070679_100210116 3300005530 Unclassified 1910
52 Ga0070684_100002256 3300005535 Bacteria 14176
53 Ga0070672_100051969 3300005543 Bacteria 3198
54 Ga0070672_100203269 3300005543 Bacteria 1657
55 Ga0070672_100571572 3300005543 Bacteria 983
56 Ga0070686_100079841 3300005544 Unclassified 2163
57 Ga0070686_100145889 3300005544 Unclassified 1652
58 Ga0070693_100027320 3300005547 Unclassified 3092
59 Ga0070693_100435290 3300005547 Bacteria 917
60 Ga0070704_100039160 3300005549 Unclassified 3253
61 Ga0070664_100000081 3300005564 Bacteria 60323
62 Ga0070664_100003467 3300005564 Bacteria 12739
63 Ga0068859_100042914 3300005617 Bacteria 4544
64 Ga0068859_100236392 3300005617 Unclassified 1916
65 Ga0068864_100131340 3300005618 Bacteria 2250
66 Ga0068864_100285027 3300005618 Bacteria 1543
67 Ga0068866_10035931 3300005718 Bacteria 2423
68 Ga0068866_10179912 3300005718 Unclassified 1248
69 Ga0068851_10005417 3300005834 Bacteria 5789
70 Ga0068860_100034847 3300005843 Bacteria 4829
71 Ga0068860_100355671 3300005843 Bacteria 1442
72 Ga0068862_100023803 3300005844 Bacteria 5134
73 Ga0081455_10308644 3300005937 Bacteria 1132
74 Ga0070717_10088847 3300006028 Bacteria 2605
75 Ga0075365_10167582 3300006038 Bacteria 1533
76 Ga0075364_10129969 3300006051 Unclassified 1690
77 Ga0068871_100624387 3300006358 Bacteria 982
78 Ga0075428_100011822 3300006844 Bacteria 9715
79 Ga0075428_100416898 3300006844 Bacteria 1439
80 Ga0075430_100006908 3300006846 Bacteria 9567
81 Ga0075431_100008025 3300006847 Bacteria 10532
82 Ga0075433_10046337 3300006852 Unclassified 3781
83 Ga0075434_100011753 3300006871 Bacteria 8269
84 Ga0075434_100095570 3300006871 Bacteria 2977
85 Ga0075434_100411661 3300006871 Unclassified 1373
86 Ga0075429_100181542 3300006880 Unclassified 1844
87 Ga0075429_100182614 3300006880 Bacteria 1838
88 Ga0075429_100351903 3300006880 Bacteria 1289
89 Ga0097620_100042913 3300006931 Bacteria 4544
90 Ga0097620_100236409 3300006931 Unclassified 1916
91 Ga0075435_100108959 3300007076 Bacteria 2302
92 Ga0105240_10166552 3300009093 Bacteria 2613
93 Ga0111539_10006238 3300009094 Bacteria 15388
94 Ga0111539_10224356 3300009094 Bacteria 2189
95 Ga0114129_10009622 3300009147 Bacteria 13788
96 Ga0114129_10025441 3300009147 Bacteria 8388
97 Ga0114129_10026206 3300009147 Bacteria 8255
98 Ga0114129_10048292 3300009147 Bacteria 5981
99 Ga0105243_10006849 3300009148 Bacteria 8787
100 Ga0105241_10082576 3300009174 Bacteria 2519
101 Ga0105248_10066317 3300009177 Bacteria 4053
102 Ga0105248_10072319 3300009177 Bacteria 3875
103 Ga0105248_10639332 3300009177 Bacteria 1200
104 Ga0105248_10761931 3300009177 Bacteria 1092
105 Ga0105238_10026535 3300009551 Bacteria 5906
106 Ga0105249_10011641 3300009553 Bacteria 7735
107 Ga0105249_10059007 3300009553 Bacteria 3518
108 Ga0163162_10172552 3300013306 Bacteria 2287
109 Ga0157375_10035350 3300013308 Bacteria 4768
110 Ga0157375_10280969 3300013308 Bacteria 1828
111 Ga0163163_10101591 3300014325 Bacteria 2898
112 Ga0157380_10026565 3300014326 Bacteria 4396
113 Ga0157380_10037247 3300014326 Bacteria 3768
114 Ga0157380_10221048 3300014326 Bacteria 1695
115 Ga0157380_10232549 3300014326 Unclassified 1656
116 Ga0157376_10211049 3300014969 Bacteria 1792
117 Ga0207697_10029929 3300025315 Bacteria 2229
118 Ga0207656_10002085 3300025321 Bacteria 6684
119 Ga0207647_10036003 3300025904 Bacteria 3148
120 Ga0207695_10499656 3300025913 Bacteria 1098
121 Ga0207662_10006976 3300025918 Bacteria 6130
122 Ga0207649_10047974 3300025920 Bacteria 2632
123 Ga0207681_10006665 3300025923 Bacteria 7092
124 Ga0207681_10056655 3300025923 Bacteria 2674
125 Ga0207694_10048570 3300025924 Bacteria 3283
126 Ga0207650_10014123 3300025925 Bacteria 5547
127 Ga0207650_10015833 3300025925 Bacteria 5259
128 Ga0207650_10026755 3300025925 Bacteria 4120
129 Ga0207650_10045352 3300025925 Bacteria 3234
130 Ga0207659_10006393 3300025926 Bacteria 7216
131 Ga0207659_10059335 3300025926 Bacteria 2750
132 Ga0207700_10174347 3300025928 Bacteria 1796
133 Ga0207644_10043691 3300025931 Bacteria 3181
134 Ga0207690_10103422 3300025932 Bacteria 2038
135 Ga0207690_10127101 3300025932 Bacteria 1860
136 Ga0207690_10287623 3300025932 Unclassified 1282
137 Ga0207706_10058561 3300025933 Bacteria 3393
138 Ga0207706_10196977 3300025933 Bacteria 1767
139 Ga0207706_10309743 3300025933 Bacteria 1375
140 Ga0207686_10025389 3300025934 Bacteria 3446
141 Ga0207691_10117659 3300025940 Bacteria 2358
142 Ga0207691_10188418 3300025940 Bacteria 1800
143 Ga0207711_10038773 3300025941 Bacteria 4052
144 Ga0207689_10053202 3300025942 Unclassified 3336
145 Ga0207661_10007652 3300025944 Bacteria 7685
146 Ga0207679_10003627 3300025945 Bacteria 9570
147 Ga0207679_10005518 3300025945 Bacteria 7926
148 Ga0207651_10032032 3300025960 Bacteria 3370
149 Ga0207651_10043082 3300025960 Bacteria 3009
150 Ga0207712_10011601 3300025961 Bacteria 5619
151 Ga0207668_10192090 3300025972 Bacteria 1619
152 Ga0207640_10024107 3300025981 Bacteria 3666
153 Ga0207703_10065727 3300026035 Bacteria 2981
154 Ga0207678_10020397 3300026067 Bacteria 5812
155 Ga0207708_10005533 3300026075 Bacteria 9320
156 Ga0207641_10422505 3300026088 Bacteria 1284
157 Ga0207648_10001413 3300026089 Bacteria 26456
158 Ga0207676_10109488 3300026095 Bacteria 2308
159 Ga0207676_10258802 3300026095 Bacteria 1570
160 Ga0207674_10009058 3300026116 Bacteria 11430
161 Ga0207675_100031786 3300026118 Bacteria 4917
162 Ga0207683_10015810 3300026121 Bacteria 6424
163 Ga0207683_10084003 3300026121 Bacteria 2830
164 Ga0207683_10406320 3300026121 Bacteria 1253
165 Ga0209974_10051871 3300027876 Bacteria 1380
166 Ga0268265_10028823 3300028380 Bacteria 3979
167 Ga0268265_10333037 3300028380 Bacteria 1379
168 Ga0268265_10448851 3300028380 Bacteria 1204
169 Ga0268264_10051149 3300028381 Bacteria 3442
170 Ga0307408_100010010 3300031548 Bacteria 6248
171 Ga0307408_100063738 3300031548 Bacteria 2697
172 Ga0307413_10098411 3300031824 Bacteria 1926
173 Ga0307407_10031781 3300031903 Bacteria 2863
174 Ga0307412_10043670 3300031911 Bacteria 2920
175 Ga0307409_100020576 3300031995 Bacteria 4501
176 Ga0307409_100334593 3300031995 Bacteria 1422
177 Ga0307416_100089497 3300032002 Bacteria 2636
178 Ga0307416_100103838 3300032002 Bacteria 2482
179 Ga0307416_100205783 3300032002 Bacteria 1872
180 Ga0307416_100254566 3300032002 Bacteria 1711
181 Ga0307414_10132891 3300032004 Bacteria 1935
182 Ga0307411_10047421 3300032005 Bacteria 2777
183 Ga0307411_10190001 3300032005 Bacteria 1567
184 Ga0307411_10362366 3300032005 Bacteria 1186
185 Ga0307415_100045038 3300032126 Bacteria 2955
186 Ga0373939_0010451 3300035114 Bacteria 2322
187 Ga0373961_0070093 3300035241 Bacteria 1083
188 Ga0373925_0003025 3300037068 Bacteria 13231
189 Ga0439453_0017138 3300041408 Bacteria 1270
190 Ga0439433_0020536 3300041999 Bacteria 1475
191 Ga0439446_0011125 3300042156 Bacteria 2438
192 Ga0439460_0025551 3300042461 Bacteria 1645
193 Ga0451577_0020373 3300042876 Bacteria 6087
194 Ga0495586_0065476 3300046535 Bacteria 1981
195 Ga0495645_0066158 3300046543 Bacteria 2613
196 Ga0495588_0116489 3300046674 Bacteria 1408
197 Ga0495599_0152172 3300046678 Bacteria 1432
198 Ga0495684_0243773 3300047471 Unclassified 1310
199 Ga0496104_0017213 3300048907 Bacteria 6576
200 Ga0496106_0190465 3300048909 Bacteria 1631
201 Ga0496108_0013540 3300048911 Bacteria 6657
202 Ga0496109_0025891 3300048912 Bacteria 5229
203 Ga0496110_0000315 3300048913 Bacteria 31988
204 Ga0496111_0001017 3300048914 Bacteria 15405
205 Ga0496112_0016499 3300048915 Bacteria 6921
206 Ga0496112_0279404 3300048915 Bacteria 1617
207 Ga0496112_0619168 3300048915 Bacteria 1014
208 Ga0501034_0001604 3300049571 Bacteria 29391
209 Ga0501039_0072173 3300049575 Bacteria 2683
210 Ga0501041_0027611 3300049577 Bacteria 3420
211 Ga0501042_0063477 3300049578 Bacteria 2640
212 Ga0501048_0039766 3300049582 Bacteria 3372
213 Ga0501071_0005419 3300049587 Bacteria 8198
214 Ga0501071_0139464 3300049587 Unclassified 1805
215 Ga0501072_0039569 3300049588 Bacteria 3702
216 Ga0501072_0050173 3300049588 Bacteria 3286
217 Ga0501075_0032044 3300049591 Bacteria 3904
218 Ga0501075_0096306 3300049591 Bacteria 2246
219 Ga0501076_0011163 3300049592 Bacteria 6684
220 Ga0501076_0398387 3300049592 Unclassified 1132
221 Ga0501079_0180356 3300049741 Bacteria 1648
222 Ga0501081_0124729 3300049743 Bacteria 1836
223 Ga0501081_0254156 3300049743 Bacteria 1283
224 Ga0501045_0093372 3300049824 Unclassified 2226
225 Ga0501045_0416659 3300049824 Unclassified 999
226 nmdc:mga0yw44_51492_c1 3300050492 Bacteria 2493
227 nmdc:mga05p37_111405_c1 3300050507 Bacteria 3366
228 nmdc:mga05p37_13287_c1 3300050507 Bacteria 9859
229 nmdc:mga05p37_32478_c1 3300050507 Bacteria 6383
230 nmdc:mga05p37_56181_c1 3300050507 Bacteria 4846
231 nmdc:mga09592_119543_c1 3300050508 Bacteria 2262
232 nmdc:mga09592_128199_c1 3300050508 Unclassified 2182
233 nmdc:mga09592_151213_c1 3300050508 Bacteria 2003
234 nmdc:mga0qj67_96237_c1 3300050509 Bacteria 2384
235 nmdc:mga06r32_73400_c1 3300050510 Bacteria 3315
236 nmdc:mga06r32_75688_c1 3300050510 Unclassified 3267
237 nmdc:mga08y16_282727_c1 3300050511 Bacteria 1711
238 nmdc:mga08y16_499666_c1 3300050511 Unclassified 1236
239 nmdc:mga08y16_85629_c1 3300050511 Bacteria 3285
240 nmdc:mga0n895_10735_c1 3300050512 Bacteria 8119
241 nmdc:mga0n895_241474_c1 3300050512 Bacteria 1833
242 nmdc:mga0n895_317351_c1 3300050512 Unclassified 1579
243 nmdc:mga0n895_92872_c1 3300050512 Bacteria 3021
244 nmdc:mga0a205_7556_c1 3300050515 Bacteria 5101
245 Ga0500628_015890 3300053129 Bacteria 1446
246 Ga0501084_0021034 3300054114 Bacteria 5442
247 Ga0590071_000206 3300059421 Bacteria 17414
248 Ga0590074_015143 3300059423 Unclassified 1307
249 Ga0590075_000228 3300059424 Bacteria 15773
250 Ga0590075_033848 3300059424 Unclassified 1298
251 Ga0590077_000235 3300059426 Bacteria 15785
252 Ga0530510_0116211 3300061734 Bacteria 1961
253 JGI24751J29686_10011159
254 Ga0065704_10183906
255 Ga0065712_10070711
256 Ga0065712_10121227
257 Ga0065715_10008224
258 Ga0065715_10040798
259 Ga0065715_10093154
260 Ga0065715_10097397
261 Ga0065715_10201243
262 Ga0065715_10208789
263 Ga0065715_10233910
264 Ga0065707_10149304
265 Ga0070683_100007104
266 Ga0070690_100034249
267 Ga0070670_100006089
268 Ga0070670_100021238
269 Ga0070670_100027041
270 Ga0068869_100132492
271 Ga0070666_10059258
272 Ga0068868_100431394
273 Ga0070689_100018394
274 Ga0070689_100412743
275 Ga0070687_100033847
276 Ga0070661_100075651
277 Ga0070661_100194992
278 Ga0070669_100000449
279 Ga0070669_100449272
280 Ga0070675_100022379
281 Ga0070675_100115019
282 Ga0070675_100143399
283 Ga0070675_100180341
284 Ga0070671_100146821
285 Ga0070671_100426270
286 Ga0070673_100015302
287 Ga0070673_100055535
288 Ga0070673_100072153
289 Ga0070659_100129124
290 Ga0070713_100006723
291 Ga0070705_100052418
292 Ga0070700_100049832
293 Ga0070708_100565753
294 Ga0070663_100016028
295 Ga0070678_100017255
296 Ga0070678_100139450
297 Ga0070678_100525049
298 Ga0070662_100110945
299 Ga0070662_100145419
300 Ga0068867_100004667
301 Ga0070685_10150385
302 Ga0070685_10154714
303 Ga0070679_100210116
304 Ga0070684_100002256
305 Ga0070672_100051969
306 Ga0070672_100203269
307 Ga0070672_100571572
308 Ga0070686_100079841
309 Ga0070686_100145889
310 Ga0070693_100027320
311 Ga0070693_100435290
312 Ga0070704_100039160
313 Ga0070664_100000081
314 Ga0070664_100003467
315 Ga0068859_100042914
316 Ga0068859_100236392
317 Ga0068864_100131340
318 Ga0068864_100285027
319 Ga0068866_10035931
320 Ga0068866_10179912
321 Ga0068851_10005417
322 Ga0068860_100034847
323 Ga0068860_100355671
324 Ga0068862_100023803
325 Ga0081455_10308644
326 Ga0070717_10088847
327 Ga0075365_10167582
328 Ga0075364_10129969
329 Ga0068871_100624387
330 Ga0075428_100011822
331 Ga0075428_100416898
332 Ga0075430_100006908
333 Ga0075431_100008025
334 Ga0075433_10046337
335 Ga0075434_100011753
336 Ga0075434_100095570
337 Ga0075434_100411661
338 Ga0075429_100181542
339 Ga0075429_100182614
340 Ga0075429_100351903
341 Ga0097620_100042913
342 Ga0097620_100236409
343 Ga0075435_100108959
344 Ga0105240_10166552
345 Ga0111539_10006238
346 Ga0111539_10224356
347 Ga0114129_10009622
348 Ga0114129_10025441
349 Ga0114129_10026206
350 Ga0114129_10048292
351 Ga0105243_10006849
352 Ga0105241_10082576
353 Ga0105248_10066317
354 Ga0105248_10072319
355 Ga0105248_10639332
356 Ga0105248_10761931
357 Ga0105238_10026535
358 Ga0105249_10011641
359 Ga0105249_10059007
360 Ga0163162_10172552
361 Ga0157375_10035350
362 Ga0157375_10280969
363 Ga0163163_10101591
364 Ga0157380_10026565
365 Ga0157380_10037247
366 Ga0157380_10221048
367 Ga0157380_10232549
368 Ga0157376_10211049
369 Ga0207697_10029929
370 Ga0207656_10002085
371 Ga0207647_10036003
372 Ga0207695_10499656
373 Ga0207662_10006976
374 Ga0207649_10047974
375 Ga0207681_10006665
376 Ga0207681_10056655
377 Ga0207694_10048570
378 Ga0207650_10014123
379 Ga0207650_10015833
380 Ga0207650_10026755
381 Ga0207650_10045352
382 Ga0207659_10006393
383 Ga0207659_10059335
384 Ga0207700_10174347
385 Ga0207644_10043691
386 Ga0207690_10103422
387 Ga0207690_10127101
388 Ga0207690_10287623
389 Ga0207706_10058561
390 Ga0207706_10196977
391 Ga0207706_10309743
392 Ga0207686_10025389
393 Ga0207691_10117659
394 Ga0207691_10188418
395 Ga0207711_10038773
396 Ga0207689_10053202
397 Ga0207661_10007652
398 Ga0207679_10003627
399 Ga0207679_10005518
400 Ga0207651_10032032
401 Ga0207651_10043082
402 Ga0207712_10011601
403 Ga0207668_10192090
404 Ga0207640_10024107
405 Ga0207703_10065727
406 Ga0207678_10020397
407 Ga0207708_10005533
408 Ga0207641_10422505
409 Ga0207648_10001413
410 Ga0207676_10109488
411 Ga0207676_10258802
412 Ga0207674_10009058
413 Ga0207675_100031786
414 Ga0207683_10015810
415 Ga0207683_10084003
416 Ga0207683_10406320
417 Ga0209974_10051871
418 Ga0268265_10028823
419 Ga0268265_10333037
420 Ga0268265_10448851
421 Ga0268264_10051149
422 Ga0307408_100010010
423 Ga0307408_100063738
424 Ga0307413_10098411
425 Ga0307407_10031781
426 Ga0307412_10043670
427 Ga0307409_100020576
428 Ga0307409_100334593
429 Ga0307416_100089497
430 Ga0307416_100103838
431 Ga0307416_100205783
432 Ga0307416_100254566
433 Ga0307414_10132891
434 Ga0307411_10047421
435 Ga0307411_10190001
436 Ga0307411_10362366
437 Ga0307415_100045038
438 Ga0373939_0010451
439 Ga0373961_0070093
440 Ga0373925_0003025
441 Ga0439453_0017138
442 Ga0439433_0020536
443 Ga0439446_0011125
444 Ga0439460_0025551
445 Ga0451577_0020373
446 Ga0495586_0065476
447 Ga0495645_0066158
448 Ga0495588_0116489
449 Ga0495599_0152172
450 Ga0495684_0243773
451 Ga0496104_0017213
452 Ga0496106_0190465
453 Ga0496108_0013540
454 Ga0496109_0025891
455 Ga0496110_0000315
456 Ga0496111_0001017
457 Ga0496112_0016499
458 Ga0496112_0279404
459 Ga0496112_0619168
460 Ga0501034_0001604
461 Ga0501039_0072173
462 Ga0501041_0027611
463 Ga0501042_0063477
464 Ga0501048_0039766
465 Ga0501071_0005419
466 Ga0501071_0139464
467 Ga0501072_0039569
468 Ga0501072_0050173
469 Ga0501075_0032044
470 Ga0501075_0096306
471 Ga0501076_0011163
472 Ga0501076_0398387
473 Ga0501079_0180356
474 Ga0501081_0124729
475 Ga0501081_0254156
476 Ga0501045_0093372
477 Ga0501045_0416659
478 nmdc:mga0yw44_51492_c1
479 nmdc:mga05p37_111405_c1
480 nmdc:mga05p37_13287_c1
481 nmdc:mga05p37_32478_c1
482 nmdc:mga05p37_56181_c1
483 nmdc:mga09592_119543_c1
484 nmdc:mga09592_128199_c1
485 nmdc:mga09592_151213_c1
486 nmdc:mga0qj67_96237_c1
487 nmdc:mga06r32_73400_c1
488 nmdc:mga06r32_75688_c1
489 nmdc:mga08y16_282727_c1
490 nmdc:mga08y16_499666_c1
491 nmdc:mga08y16_85629_c1
492 nmdc:mga0n895_10735_c1
493 nmdc:mga0n895_241474_c1
494 nmdc:mga0n895_317351_c1
495 nmdc:mga0n895_92872_c1
496 nmdc:mga0a205_7556_c1
497 Ga0500628_015890
498 Ga0501084_0021034
499 Ga0590071_000206
500 Ga0590074_015143
501 Ga0590075_000228
502 Ga0590075_033848
503 Ga0590077_000235
504 Ga0530510_0116211

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12679

ABC2_membrane_2

ABC-2 family transporter protein

5

301

0.72

PF12730

ABC2_membrane_4

ABC-2 family transporter protein

42

228

0.57

Structural Annotation

Top 5 Hits

ID Description Score Start End
7o16-assembly1.cif.gz_D abc transporter nosdfy, nucleotide-free in lipid nanodisc, r-domain 3 0.715 33 300
7znq-assembly1.cif.gz_Y abc transporter complex nosdfyl in gdn 0.7148 33 301
7o16-assembly1.cif.gz_D abc transporter nosdfy, nucleotide-free in lipid nanodisc, r-domain 3 0.7103 33 300
7znq-assembly1.cif.gz_Y abc transporter complex nosdfyl in gdn 0.7102 33 301
8wbx-assembly1.cif.gz_B cryo-em structure of the abcg25 bound to aba 0.6902 30 300
ID Description Score Start End Superfamily
af_Q86P18_394_773_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.5561 95 296 3.40.1710.10
af_Q9VMM9_322_706_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.5003 89 297 3.40.1710.10
af_Q2G1V6_3_205_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.4954 29 297 1.10.3720.10
af_Q2G1V6_3_205_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.4852 29 297 1.10.3720.10
af_Q86P18_394_773_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.3767 95 296 3.40.1710.10
ID Description Score Start End GO Terms
AF-A0A2G4JIQ0-F1-model_v4 ABC transporter permease 0.92 26 306 GO:0005886
GO:0140359
AF-A0A1F5B9I0-F1-model_v4 ABC transporter permease 0.9156 32 306 GO:0005886
GO:0140359
AF-A0A2G4JIQ0-F1-model_v4 ABC transporter permease 0.9132 26 306 GO:0005886
GO:0140359
AF-A0A1F5B9I0-F1-model_v4 ABC transporter permease 0.9089 32 306 GO:0005886
GO:0140359
AF-A0A257V552-F1-model_v4 ABC-2 type transporter domain-containing protein 0.9086 32 299 GO:0016020

Map