F362716

General Info

Members Datasets Scaffolds Average Seq Length
251 199 210 366

Family's Representative Sequence

Representative Sequence 3300048909|Ga0496106_0028187|Ga0496106_0028187_1943_3169
Length 408
Sequence MHWYAIGYVPDVGVPRTSARLKALADQALVLFKEDAHVERHPGTCPPARPVIGEEEIEAVVRVLRSGRVVQGPEVAAFEEGFSELVDGRHCVAVNSGTSALHLLLLALGIGPGDEVIVPSFSFAATANAVRLTGADVVFADIEPGSFGLDPAAVEAAITPRTAAIMPVHLYGHPAAMDALMAIATKRGLAVVEDACQAHAAALNGTPVGAFGSGGTFSFYPTKNMHSLEGGMITTADAEVARTLRLLRNQGMEQRYANEIVGANMRMTDVSAAVGRVQLGKVLGWTEQRRANAAYLDRHITAANVTVPPVAEGARHVYHQYTVRVHGDRDAAMARLNEAGIGNAVYYPTPIHRLKPYWEPDQKAGRNWDLPETERAAAEVVSLPVHPSLSPDDLDRIVAAVNSLGDMQ

Samples

Sample ID Description Type Environment
1 2501939600 Micromonospora sp. L5 Isolate Unclassified
2 2513237095 Bradyrhizobium diazoefficiens USDA 122 Isolate Nodule
3 2515154129 Salinispora pacifica CNS103 Isolate Rhizosphere
4 2515154137 Salinispora arenicola CNX482 Isolate Rhizosphere
5 2515154203 Salinispora arenicola CNR921 Isolate Rhizosphere
6 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
7 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
8 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
9 2643221548 Streptomyces sp. Root55 Isolate Unclassified
10 2643221576 Nocardioides sp. Root614 Isolate Unclassified
11 2643221578 Streptomyces sp. Root63 Isolate Unclassified
12 2643221590 Nocardioides sp. Root682 Isolate Unclassified
13 2643221601 Kitasatospora sp. Root187 Isolate Unclassified
14 2643221631 Kitasatospora sp. Root107 Isolate Unclassified
15 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
16 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
17 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
18 2643221714 Streptomyces sp. Root264 Isolate Unclassified
19 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
20 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
21 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
22 2816332527 Bradyrhizobium diazoefficiens Y21 Isolate Nodule
23 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
24 2855683550 Micromonospora sp. RP3T Isolate Unclassified
25 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
26 2858868258 Micromonospora sp. MH33 Isolate Unclassified
27 2861520306 Phytomonospora endophytica DSM 45386 Isolate Unclassified
28 2862574272 Streptomyces sp. AcE210 Isolate Nodule
29 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
30 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
31 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
32 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
33 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
34 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
35 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
36 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
37 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
38 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
39 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
40 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
41 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
42 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
43 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
44 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
45 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
46 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
47 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
48 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
49 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
50 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
51 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
52 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
53 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
54 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
55 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
56 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
57 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
58 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
59 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
60 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
61 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
62 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
63 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
71 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
72 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
73 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
74 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
75 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
76 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
77 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
78 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
79 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
80 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
81 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
82 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
83 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
84 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
85 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
86 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
87 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
88 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
89 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
90 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
91 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
92 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
93 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
94 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
95 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
96 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
97 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
98 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
99 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
100 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
101 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
102 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
103 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
104 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
105 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
106 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
107 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
108 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
109 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
110 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
111 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
112 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
113 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
114 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
115 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
116 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
117 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
118 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
119 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
120 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
121 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
122 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
123 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
124 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
125 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
126 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
127 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
128 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
129 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
130 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
131 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
132 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
133 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
134 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
135 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
136 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
137 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
138 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
139 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
140 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
141 3300049127 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_A_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
142 3300049128 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_B_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
143 3300049129 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_B_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
144 3300049130 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_B_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
145 3300049162 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_A_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
146 3300049527 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_B_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
147 3300049528 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
148 3300049531 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
149 3300049532 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
150 3300049533 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
151 3300049534 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
152 3300049535 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
153 3300049536 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_A_3_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
154 3300049539 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_B_3_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
155 3300049540 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
156 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
159 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
161 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
164 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
165 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
167 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
169 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
170 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
171 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
172 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
173 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
174 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
175 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
176 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
177 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
178 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
179 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
180 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
181 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
182 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
183 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
184 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
185 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
186 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
187 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
188 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
189 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
190 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
191 3300059492 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 14R_AD_T1_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
192 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
193 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
194 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
195 649633069 Micromonospora sp. L5 Isolate Unclassified
196 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
197 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
198 8055412473 Micromonospora phytophila DSM 105363 Isolate Nodule
199 8056054917 Glycomyces luteolus NEAU-A15 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 76.1
Metatranscriptomes 7.57
Isolates 16.33

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.99
Nodule 1.59
Rhizoplane 3.19
Rhizosphere 77.29
Stem 0
Stem Tuber 0
Unclassified 15.94

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10029378 3300003320 Bacteria 1891
2 rootH2_10060285 3300003320 Bacteria 1853
3 JGI25407J50210_10000219 3300003373 Bacteria 9862
4 Ga0006562J51391_1153468 3300003578 Bacteria 2137
5 Ga0065165_1000473 3300005262 Bacteria 62722
6 Ga0070708_100174010 3300005445 Bacteria 2011
7 Ga0070706_100153404 3300005467 Unclassified 2150
8 Ga0070707_100002273 3300005468 Bacteria 18353
9 Ga0070698_100001342 3300005471 Bacteria 27344
10 Ga0070698_100028590 3300005471 Bacteria 5790
11 Ga0070698_100060889 3300005471 Bacteria 3808
12 Ga0070697_100101115 3300005536 Bacteria 2395
13 Ga0070695_100000411 3300005545 Bacteria 22150
14 Ga0070665_100052687 3300005548 Bacteria 4080
15 Ga0070665_100483485 3300005548 Bacteria 1249
16 Ga0068863_100023264 3300005841 Bacteria 5921
17 Ga0081455_10099588 3300005937 Bacteria 2337
18 Ga0081538_10000733 3300005981 Bacteria 35847
19 Ga0081539_10000733 3300005985 Bacteria 65742
20 Ga0081539_10000837 3300005985 Bacteria 59104
21 Ga0081539_10003707 3300005985 Bacteria 18201
22 Ga0081539_10006951 3300005985 Bacteria 10522
23 Ga0081539_10010514 3300005985 Bacteria 7503
24 Ga0081539_10019696 3300005985 Bacteria 4604
25 Ga0075428_100000112 3300006844 Bacteria 69141
26 Ga0075434_100019300 3300006871 Bacteria 6596
27 Ga0105245_10084971 3300009098 Bacteria 2900
28 Ga0105243_10008340 3300009148 Bacteria 7959
29 Ga0105246_10032248 3300011119 Bacteria 3474
30 Ga0163162_10465269 3300013306 Bacteria 1396
31 Ga0163163_10002161 3300014325 Bacteria 16619
32 Ga0157380_10083948 3300014326 Bacteria 2610
33 Ga0206354_11007352 3300020081 Bacteria 1304
34 Ga0224712_10003559 3300022467 Bacteria 4071
35 Ga0209758_1006402 3300025297 Bacteria 8478
36 Ga0207684_10013518 3300025910 Bacteria 7059
37 Ga0207646_10000459 3300025922 Bacteria 54565
38 Ga0207664_10130942 3300025929 Bacteria 2111
39 Ga0207709_10109260 3300025935 Bacteria 1846
40 Ga0207678_10096490 3300026067 Bacteria 2526
41 Ga0207678_10099998 3300026067 Bacteria 2477
42 Ga0207641_10007840 3300026088 Bacteria 8866
43 Ga0207641_10213116 3300026088 Bacteria 1787
44 Ga0207683_10280039 3300026121 Bacteria 1524
45 Ga0307517_10081614 3300028786 Bacteria 2754
46 Ga0307515_10000088 3300028794 Bacteria 215810
47 Ga0307515_10010981 3300028794 Bacteria 17263
48 Ga0307515_10016661 3300028794 Bacteria 13442
49 Ga0307512_10007140 3300030522 Bacteria 11122
50 Ga0307513_10000001 3300031456 Bacteria 1660464
51 Ga0307513_10061818 3300031456 Bacteria 3962
52 Ga0307408_100129012 3300031548 Bacteria 1970
53 Ga0307508_10005187 3300031616 Bacteria 12468
54 Ga0307508_10041728 3300031616 Bacteria 4117
55 Ga0316579_10055938 3300031691 Archaea 1851
56 Ga0307516_10001837 3300031730 Bacteria 29139
57 Ga0307516_10006978 3300031730 Bacteria 13099
58 Ga0307516_10011471 3300031730 Bacteria 9622
59 Ga0307405_10067265 3300031731 Bacteria 2288
60 Ga0307405_10250215 3300031731 Bacteria 1318
61 Ga0316577_10050579 3300031733 Unclassified 2320
62 Ga0307410_10019639 3300031852 Bacteria 4115
63 Ga0307410_10086216 3300031852 Bacteria 2218
64 Ga0307406_10021344 3300031901 Bacteria 3829
65 Ga0307407_10023544 3300031903 Bacteria 3215
66 Ga0307412_10014557 3300031911 Bacteria 4643
67 Ga0307409_100016339 3300031995 Bacteria 4907
68 Ga0307409_100025097 3300031995 Bacteria 4173
69 Ga0307416_100080224 3300032002 Bacteria 2753
70 Ga0307416_100214626 3300032002 Bacteria 1839
71 Ga0307414_10035893 3300032004 Bacteria 3304
72 Ga0307507_10000007 3300033179 Bacteria 269525
73 Ga0373956_0009717 3300035119 Bacteria 3917
74 Ga0373961_0000155 3300035241 Bacteria 33026
75 Ga0373927_0000052 3300035695 Bacteria 82707
76 Ga0316582_0000089 3300036647 Archaea 24314
77 Ga0316582_0003975 3300036647 Archaea 7385
78 Ga0316582_0247780 3300036647 Unclassified 1221
79 Ga0395899_0003287 3300037312 Bacteria 12816
80 Ga0395898_0035209 3300037466 Bacteria 4982
81 Ga0395901_0139679 3300038443 Bacteria 2546
82 Ga0400483_172989 3300039062 Bacteria 12511
83 Ga0439439_0006450 3300041406 Bacteria 2714
84 Ga0451853_0998909 3300041512 Bacteria 4669
85 Ga0439442_008502 3300042002 Bacteria 2073
86 Ga0439449_0002999 3300042007 Bacteria 6586
87 Ga0439449_0004177 3300042007 Bacteria 5579
88 Ga0439449_0011740 3300042007 Bacteria 3291
89 Ga0451577_0003610 3300042876 Bacteria 17013
90 Ga0466969_0005684 3300044656 Bacteria 6629
91 Ga0466969_0008743 3300044656 Bacteria 5367
92 Ga0466966_0009000 3300044684 Bacteria 6617
93 Ga0466961_0002645 3300044693 Bacteria 11119
94 Ga0466961_0038781 3300044693 Bacteria 3055
95 Ga0453684_0080731 3300044712 Bacteria 4059
96 Ga0466970_0021975 3300044765 Bacteria 3329
97 Ga0466959_0000484 3300045049 Bacteria 23199
98 Ga0495603_0002579 3300046455 Bacteria 10687
99 Ga0495603_0003062 3300046455 Bacteria 9922
100 Ga0495603_0008026 3300046455 Bacteria 6375
101 Ga0495603_0010025 3300046455 Bacteria 5732
102 Ga0495603_0023987 3300046455 Bacteria 3690
103 Ga0495629_0000761 3300046459 Bacteria 25940
104 Ga0495629_0002355 3300046459 Bacteria 14546
105 Ga0495639_0047932 3300046475 Bacteria 1937
106 Ga0495664_0049406 3300046477 Bacteria 2497
107 Ga0495585_0004577 3300046492 Bacteria 8943
108 Ga0495594_0003165 3300046499 Bacteria 8515
109 Ga0495594_0046909 3300046499 Bacteria 2373
110 Ga0495594_0133322 3300046499 Bacteria 1407
111 Ga0495607_0078307 3300046501 Bacteria 1824
112 Ga0495606_0011766 3300046507 Bacteria 7089
113 Ga0495628_0011610 3300046516 Bacteria 7448
114 Ga0495628_0316218 3300046516 Bacteria 1153
115 Ga0495652_0010622 3300046529 Bacteria 8342
116 Ga0495640_0018697 3300046533 Bacteria 5129
117 Ga0495645_0028324 3300046543 Bacteria 4070
118 Ga0495645_0187720 3300046543 Bacteria 1411
119 Ga0495668_0000169 3300046616 Bacteria 97150
120 Ga0495625_0011282 3300046660 Bacteria 7303
121 Ga0495635_0001509 3300046663 Bacteria 15601
122 Ga0495588_0004807 3300046674 Bacteria 5978
123 Ga0495646_0090984 3300046680 Bacteria 1761
124 Ga0495613_0003133 3300046689 Bacteria 12387
125 Ga0495613_0007381 3300046689 Bacteria 8192
126 Ga0495613_0008788 3300046689 Bacteria 7490
127 Ga0495589_0009422 3300046794 Bacteria 5077
128 Ga0495600_0017868 3300046809 Bacteria 4514
129 Ga0495604_0003001 3300047317 Bacteria 13501
130 Ga0495636_0033470 3300047318 Bacteria 2112
131 Ga0495676_0002937 3300047321 Bacteria 15408
132 Ga0495676_0004938 3300047321 Bacteria 12228
133 Ga0495676_0014428 3300047321 Bacteria 7068
134 Ga0495676_0067141 3300047321 Bacteria 2775
135 Ga0495676_0128193 3300047321 Bacteria 1835
136 Ga0495683_0026576 3300047323 Bacteria 2962
137 Ga0495675_0043448 3300047444 Bacteria 2863
138 Ga0495685_003338 3300047447 Bacteria 5109
139 Ga0495614_0000236 3300048089 Bacteria 21472
140 Ga0495614_0000406 3300048089 Bacteria 17582
141 Ga0495626_0000312 3300048091 Bacteria 51412
142 Ga0496104_0062856 3300048907 Bacteria 3521
143 Ga0496105_0209379 3300048908 Bacteria 1590
144 Ga0496106_0028187 3300048909 Bacteria 4183
145 Ga0496108_0277265 3300048911 Bacteria 1460
146 Ga0496112_0017766 3300048915 Bacteria 6693
147 Ga0496112_0033510 3300048915 Bacteria 4994
148 Ga0496112_0060445 3300048915 Bacteria 3734
149 Ga0496113_0083859 3300048916 Bacteria 2446
150 Ga0501306_000886 3300049127 Bacteria 2568
151 Ga0501308_001910 3300049128 Bacteria 1753
152 Ga0501309_004644 3300049129 Bacteria 1607
153 Ga0501310_001141 3300049130 Bacteria 2386
154 Ga0501307_003125 3300049162 Bacteria 1602
155 Ga0501311_000964 3300049527 Bacteria 2319
156 Ga0501312_004993 3300049528 Bacteria 1591
157 Ga0501315_000915 3300049531 Bacteria 2299
158 Ga0501316_000767 3300049532 Bacteria 2435
159 Ga0501317_001179 3300049533 Bacteria 2180
160 Ga0501318_000676 3300049534 Bacteria 2312
161 Ga0501319_000782 3300049535 Bacteria 1650
162 Ga0501320_000548 3300049536 Bacteria 2263
163 Ga0501323_000048 3300049539 Bacteria 5866
164 Ga0501324_000398 3300049540 Bacteria 2300
165 Ga0501031_0026421 3300049568 Bacteria 3784
166 Ga0501032_0000349 3300049569 Bacteria 38615
167 Ga0501033_0015716 3300049570 Bacteria 5739
168 Ga0501034_0060835 3300049571 Bacteria 3793
169 Ga0501036_0043929 3300049572 Bacteria 3784
170 Ga0501037_0030696 3300049573 Bacteria 3970
171 Ga0501038_0001555 3300049574 Bacteria 21204
172 Ga0501039_0018997 3300049575 Bacteria 5274
173 Ga0501040_0004569 3300049576 Bacteria 8985
174 Ga0501041_0003724 3300049577 Bacteria 8763
175 Ga0501042_0013988 3300049578 Bacteria 5468
176 Ga0501043_0036457 3300049579 Bacteria 3868
177 Ga0501046_0040896 3300049580 Bacteria 3701
178 Ga0501047_0059138 3300049581 Bacteria 3701
179 Ga0501067_0002254 3300049583 Bacteria 10636
180 Ga0501070_0045273 3300049586 Bacteria 3659
181 Ga0501071_0005879 3300049587 Bacteria 7931
182 Ga0501072_0000317 3300049588 Bacteria 34327
183 Ga0501073_0102190 3300049589 Bacteria 1990
184 Ga0501074_0007301 3300049590 Bacteria 7990
185 Ga0501076_0014122 3300049592 Bacteria 6005
186 Ga0501077_0011094 3300049593 Bacteria 5622
187 Ga0501079_0006382 3300049741 Bacteria 8853
188 Ga0501081_0148146 3300049743 Bacteria 1685
189 Ga0501083_0003239 3300049744 Bacteria 11358
190 Ga0501035_0010090 3300049822 Bacteria 8768
191 Ga0501035_0051126 3300049822 Bacteria 3701
192 Ga0501044_0063148 3300049823 Bacteria 3784
193 Ga0501044_0071092 3300049823 Bacteria 3539
194 Ga0501044_0321097 3300049823 Bacteria 1473
195 Ga0501045_0009258 3300049824 Bacteria 6888
196 Ga0501045_0180048 3300049824 Bacteria 1575
197 nmdc:mga0n895_8772_c1 3300050512 Bacteria 8792
198 Ga0495601_0004283 3300053077 Bacteria 8241
199 Ga0495601_0020111 3300053077 Bacteria 4075
200 Ga0495612_0001218 3300053078 Bacteria 10601
201 Ga0495612_0041336 3300053078 Bacteria 1880
202 Ga0500560_056457 3300053107 Bacteria 1271
203 Ga0500569_006344 3300053109 Bacteria 2593
204 Ga0500600_0062626 3300053149 Bacteria 2068
205 Ga0501084_0014370 3300054114 Bacteria 6561
206 Ga0587073_0014239 3300059492 Bacteria 1412
207 Ga0501082_0002650 3300060353 Bacteria 15649
208 Ga0466962_0000141 3300061719 Bacteria 29527
209 Ga0466962_0004198 3300061719 Bacteria 6899
210 Ga0530510_0155740 3300061734 Bacteria 1688

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300026121 Ga0207683_10280039 Ga0207683_102800392 292
2 3300047323 Ga0495683_0026576 Ga0495683_0026576_840_1847 326
3 3300033179 Ga0307507_10000007 Ga0307507_1000000797 327
4 3300046543 Ga0495645_0028324 Ga0495645_0028324_20_1003 327
5 3300053077 Ga0495601_0020111 Ga0495601_0020111_25_1008 327
6 3300014326 Ga0157380_10083948 Ga0157380_100839482 329
7 3300026088 Ga0207641_10213116 Ga0207641_102131162 330
8 3300035241 Ga0373961_0000155 Ga0373961_0000155_11946_12998 332
9 3300028786 Ga0307517_10081614 Ga0307517_100816143 337
10 3300005545 Ga0070695_100000411 Ga0070695_10000041112 339
11 3300042876 Ga0451577_0003610 Ga0451577_0003610_1529_2677 342
12 3300044712 Ga0453684_0080731 Ga0453684_0080731_2421_3569 342
13 3300031730 Ga0307516_10011471 Ga0307516_100114712 343
14 3300006844 Ga0075428_100000112 Ga0075428_1000001129 345
15 3300044693 Ga0466961_0038781 Ga0466961_0038781_1954_3024 346
16 3300046455 Ga0495603_0002579 Ga0495603_0002579_1416_2474 346
17 3300046499 Ga0495594_0046909 Ga0495594_0046909_263_1321 346
18 3300046501 Ga0495607_0078307 Ga0495607_0078307_440_1498 346
19 3300046794 Ga0495589_0009422 Ga0495589_0009422_2051_3109 346
20 3300047318 Ga0495636_0033470 Ga0495636_0033470_75_1133 346
21 3300047321 Ga0495676_0128193 Ga0495676_0128193_455_1513 346
22 3300047447 Ga0495685_003338 Ga0495685_003338_807_1865 346
23 3300009098 Ga0105245_10084971 Ga0105245_100849712 347
24 3300014325 Ga0163163_10002161 Ga0163163_100021614 347
25 3300048907 Ga0496104_0062856 Ga0496104_0062856_2086_3147 347
26 3300048908 Ga0496105_0209379 Ga0496105_0209379_21_1082 347
27 3300048915 Ga0496112_0017766 Ga0496112_0017766_5218_6279 347
28 3300048915 Ga0496112_0060445 Ga0496112_0060445_2600_3664 347
29 3300048916 Ga0496113_0083859 Ga0496113_0083859_942_2006 347
30 3300025922 Ga0207646_10000459 Ga0207646_1000045916 348
31 3300037466 Ga0395898_0035209 Ga0395898_0035209_1024_2091 348
32 3300038443 Ga0395901_0139679 Ga0395901_0139679_1140_2207 348
33 3300046507 Ga0495606_0011766 Ga0495606_0011766_3440_4513 348
34 3300046616 Ga0495668_0000169 Ga0495668_0000169_92441_93514 348
35 3300046660 Ga0495625_0011282 Ga0495625_0011282_2581_3654 348
36 3300048091 Ga0495626_0000312 Ga0495626_0000312_46670_47743 348
37 iso_pu_bacteria 2515154129 2515722276 348
38 3300003373 JGI25407J50210_10000219 JGI25407J50210_1000021910 349
39 3300005981 Ga0081538_10000733 Ga0081538_1000073316 349
40 3300035695 Ga0373927_0000052 Ga0373927_0000052_29472_30560 349
41 3300041406 Ga0439439_0006450 Ga0439439_0006450_55_1155 350
42 3300042002 Ga0439442_008502 Ga0439442_008502_858_1958 350
43 3300042007 Ga0439449_0011740 Ga0439449_0011740_1422_2522 350
44 iso_pu_bacteria 2513237095 2513645244 350
45 iso_pu_bacteria 2816332527 2818239503 350
46 3300031691 Ga0316579_10055938 Ga0316579_100559383 351
47 3300031733 Ga0316577_10050579 Ga0316577_100505792 351
48 3300020081 Ga0206354_11007352 Ga0206354_110073521 352
49 3300022467 Ga0224712_10003559 Ga0224712_100035593 352
50 3300037312 Ga0395899_0003287 Ga0395899_0003287_3782_4846 352
51 iso_pu_bacteria 2643221576 2643892769 352
52 iso_pu_bacteria 2643221590 2643962218 352
53 3300005468 Ga0070707_100002273 Ga0070707_1000022738 353
54 3300005471 Ga0070698_100001342 Ga0070698_10000134216 353
55 3300044656 Ga0466969_0005684 Ga0466969_0005684_1176_2237 353
56 3300044684 Ga0466966_0009000 Ga0466966_0009000_3796_4857 353
57 3300044693 Ga0466961_0002645 Ga0466961_0002645_5520_6581 353
58 3300045049 Ga0466959_0000484 Ga0466959_0000484_12268_13329 353
59 3300046455 Ga0495603_0008026 Ga0495603_0008026_362_1480 353
60 3300046459 Ga0495629_0000761 Ga0495629_0000761_15312_16430 353
61 3300046477 Ga0495664_0049406 Ga0495664_0049406_258_1319 353
62 3300046516 Ga0495628_0011610 Ga0495628_0011610_5955_7016 353
63 3300046516 Ga0495628_0316218 Ga0495628_0316218_38_1099 353
64 3300046529 Ga0495652_0010622 Ga0495652_0010622_2026_3087 353
65 3300046663 Ga0495635_0001509 Ga0495635_0001509_5976_7037 353
66 3300046680 Ga0495646_0090984 Ga0495646_0090984_65_1126 353
67 3300046689 Ga0495613_0008788 Ga0495613_0008788_5590_6708 353
68 3300046809 Ga0495600_0017868 Ga0495600_0017868_434_1495 353
69 3300047321 Ga0495676_0004938 Ga0495676_0004938_6330_7448 353
70 3300048089 Ga0495614_0000236 Ga0495614_0000236_355_1473 353
71 3300053077 Ga0495601_0004283 Ga0495601_0004283_3959_5020 353
72 3300053078 Ga0495612_0001218 Ga0495612_0001218_4335_5396 353
73 3300061719 Ga0466962_0000141 Ga0466962_0000141_3915_4976 353
74 3300005262 Ga0065165_1000473 Ga0065165_100047331 354
75 3300005445 Ga0070708_100174010 Ga0070708_1001740102 354
76 3300005471 Ga0070698_100060889 Ga0070698_1000608894 354
77 3300006871 Ga0075434_100019300 Ga0075434_1000193006 354
78 3300013306 Ga0163162_10465269 Ga0163162_104652692 354
79 3300048915 Ga0496112_0033510 Ga0496112_0033510_1918_3060 354
80 3300050512 nmdc:mga0n895_8772_c1 nmdc:mga0n895_8772_c1_1271_2386 354
81 iso_pu_bacteria 2808606375 2808919944 354
82 3300035119 Ga0373956_0009717 Ga0373956_0009717_1027_2115 355
83 3300036647 Ga0316582_0000089 Ga0316582_0000089_15728_16846 355
84 3300036647 Ga0316582_0003975 Ga0316582_0003975_5478_6596 355
85 3300036647 Ga0316582_0247780 Ga0316582_0247780_60_1187 355
86 3300046459 Ga0495629_0002355 Ga0495629_0002355_1174_2283 355
87 3300046499 Ga0495594_0133322 Ga0495594_0133322_204_1313 355
88 3300046689 Ga0495613_0007381 Ga0495613_0007381_4033_5142 355
89 3300048089 Ga0495614_0000406 Ga0495614_0000406_4007_5116 355
90 3300053078 Ga0495612_0041336 Ga0495612_0041336_424_1524 355
91 iso_pu_bacteria 2862574272 2862576737 355
92 iso_pu_bacteria 2887478801 2887483683 355
93 3300005548 Ga0070665_100052687 Ga0070665_1000526872 356
94 3300005985 Ga0081539_10006951 Ga0081539_100069519 356
95 3300026067 Ga0207678_10096490 Ga0207678_100964901 356
96 3300005467 Ga0070706_100153404 Ga0070706_1001534042 357
97 3300005471 Ga0070698_100028590 Ga0070698_1000285902 357
98 3300005536 Ga0070697_100101115 Ga0070697_1001011152 357
99 3300025910 Ga0207684_10013518 Ga0207684_100135186 357
100 3300039062 Ga0400483_172989 Ga0400483_172989_3275_4390 357
101 iso_pu_bacteria 2643221678 2644436378 357
102 iso_pu_bacteria 2643221714 2644625771 357
103 iso_pu_bacteria 2808606359 2808841266 357
104 iso_pu_bacteria 2861520306 2861521362 357
105 iso_pu_bacteria 2919468124 2919468668 357
106 iso_pu_bacteria 8003856774 8003860041 357
107 3300025929 Ga0207664_10130942 Ga0207664_101309423 358
108 iso_pu_bacteria 2501939600 2501945193 358
109 iso_pu_bacteria 2515154137 2515755371 358
110 iso_pu_bacteria 2515154203 2516090006 358
111 iso_pu_bacteria 2554235005 2554258587 358
112 iso_pu_bacteria 2582581312 2585301901 358
113 iso_pu_bacteria 2622736626 2623587730 358
114 iso_pu_bacteria 2643221548 2643759753 358
115 iso_pu_bacteria 2643221578 2643897877 358
116 iso_pu_bacteria 2643221673 2644409022 358
117 iso_pu_bacteria 2643221682 2644462830 358
118 iso_pu_bacteria 2808606982 2811848270 358
119 iso_pu_bacteria 2818991463 2819693678 358
120 iso_pu_bacteria 2855683550 2855683663 358
121 iso_pu_bacteria 2856858025 2856861752 358
122 iso_pu_bacteria 2858868258 2858868648 358
123 iso_pu_bacteria 2875391855 2875393788 358
124 iso_pu_bacteria 2912757875 2912759923 358
125 iso_pu_bacteria 2946045630 2946050865 358
126 iso_pu_bacteria 2966598605 2966603289 358
127 iso_pu_bacteria 2996221748 2996221806 358
128 iso_pu_bacteria 649633069 649812353 358
129 iso_pu_bacteria 8025530807 8025535118 358
130 iso_pu_bacteria 8055412473 8055418617 358
131 iso_pu_bacteria 8056054917 8056056925 358
132 3300005548 Ga0070665_100483485 Ga0070665_1004834852 359
133 3300005841 Ga0068863_100023264 Ga0068863_1000232642 359
134 3300026088 Ga0207641_10007840 Ga0207641_100078406 359
135 3300046455 Ga0495603_0023987 Ga0495603_0023987_188_1285 359
136 3300047321 Ga0495676_0067141 Ga0495676_0067141_1280_2377 359
137 iso_pu_bacteria 2643221601 2644013484 359
138 iso_pu_bacteria 2643221631 2644179335 359
139 3300003320 rootH2_10060285 rootH2_100602852 360
140 3300048911 Ga0496108_0277265 Ga0496108_0277265_235_1347 360
141 3300049823 Ga0501044_0321097 Ga0501044_0321097_216_1340 360
142 3300003578 Ga0006562J51391_1153468 Ga0006562J51391_11534681 361
143 3300005937 Ga0081455_10099588 Ga0081455_100995883 361
144 3300005985 Ga0081539_10000733 Ga0081539_1000073316 361
145 3300005985 Ga0081539_10000837 Ga0081539_1000083738 361
146 3300005985 Ga0081539_10003707 Ga0081539_1000370716 361
147 3300005985 Ga0081539_10010514 Ga0081539_100105146 361
148 3300005985 Ga0081539_10019696 Ga0081539_100196964 361
149 3300009148 Ga0105243_10008340 Ga0105243_100083403 361
150 3300011119 Ga0105246_10032248 Ga0105246_100322483 361
151 3300025297 Ga0209758_1006402 Ga0209758_10064026 361
152 3300025935 Ga0207709_10109260 Ga0207709_101092602 361
153 3300026067 Ga0207678_10099998 Ga0207678_100999982 361
154 3300028794 Ga0307515_10000088 Ga0307515_10000088110 361
155 3300028794 Ga0307515_10010981 Ga0307515_100109815 361
156 3300028794 Ga0307515_10016661 Ga0307515_100166613 361
157 3300030522 Ga0307512_10007140 Ga0307512_1000714010 361
158 3300031456 Ga0307513_10000001 Ga0307513_10000001435 361
159 3300031456 Ga0307513_10061818 Ga0307513_100618184 361
160 3300031548 Ga0307408_100129012 Ga0307408_1001290122 361
161 3300031616 Ga0307508_10005187 Ga0307508_100051877 361
162 3300031616 Ga0307508_10041728 Ga0307508_100417282 361
163 3300031730 Ga0307516_10001837 Ga0307516_100018377 361
164 3300031730 Ga0307516_10006978 Ga0307516_100069785 361
165 3300031731 Ga0307405_10067265 Ga0307405_100672653 361
166 3300031731 Ga0307405_10250215 Ga0307405_102502152 361
167 3300031852 Ga0307410_10019639 Ga0307410_100196394 361
168 3300031903 Ga0307407_10023544 Ga0307407_100235442 361
169 3300031911 Ga0307412_10014557 Ga0307412_100145574 361
170 3300031995 Ga0307409_100016339 Ga0307409_1000163394 361
171 3300031995 Ga0307409_100025097 Ga0307409_1000250974 361
172 3300032002 Ga0307416_100214626 Ga0307416_1002146261 361
173 3300032004 Ga0307414_10035893 Ga0307414_100358933 361
174 3300041512 Ga0451853_0998909 Ga0451853_0998909_1194_2297 361
175 3300042007 Ga0439449_0004177 Ga0439449_0004177_759_1874 361
176 3300044765 Ga0466970_0021975 Ga0466970_0021975_1331_2452 361
177 3300046455 Ga0495603_0003062 Ga0495603_0003062_8454_9575 361
178 3300046455 Ga0495603_0010025 Ga0495603_0010025_3045_4172 361
179 3300046475 Ga0495639_0047932 Ga0495639_0047932_88_1203 361
180 3300046499 Ga0495594_0003165 Ga0495594_0003165_7177_8298 361
181 3300046674 Ga0495588_0004807 Ga0495588_0004807_4463_5584 361
182 3300047321 Ga0495676_0014428 Ga0495676_0014428_3209_4336 361
183 3300049127 Ga0501306_000886 Ga0501306_000886_423_1544 361
184 3300049128 Ga0501308_001910 Ga0501308_001910_268_1389 361
185 3300049129 Ga0501309_004644 Ga0501309_004644_268_1389 361
186 3300049130 Ga0501310_001141 Ga0501310_001141_361_1482 361
187 3300049162 Ga0501307_003125 Ga0501307_003125_357_1478 361
188 3300049527 Ga0501311_000964 Ga0501311_000964_364_1485 361
189 3300049528 Ga0501312_004993 Ga0501312_004993_205_1326 361
190 3300049531 Ga0501315_000915 Ga0501315_000915_345_1466 361
191 3300049532 Ga0501316_000767 Ga0501316_000767_917_2038 361
192 3300049533 Ga0501317_001179 Ga0501317_001179_479_1600 361
193 3300049534 Ga0501318_000676 Ga0501318_000676_361_1482 361
194 3300049535 Ga0501319_000782 Ga0501319_000782_311_1432 361
195 3300049536 Ga0501320_000548 Ga0501320_000548_311_1432 361
196 3300049539 Ga0501323_000048 Ga0501323_000048_743_1864 361
197 3300049540 Ga0501324_000398 Ga0501324_000398_350_1471 361
198 3300049568 Ga0501031_0026421 Ga0501031_0026421_2324_3439 361
199 3300049569 Ga0501032_0000349 Ga0501032_0000349_5625_6740 361
200 3300049570 Ga0501033_0015716 Ga0501033_0015716_2301_3416 361
201 3300049571 Ga0501034_0060835 Ga0501034_0060835_355_1470 361
202 3300049572 Ga0501036_0043929 Ga0501036_0043929_346_1461 361
203 3300049573 Ga0501037_0030696 Ga0501037_0030696_2324_3439 361
204 3300049574 Ga0501038_0001555 Ga0501038_0001555_2324_3439 361
205 3300049575 Ga0501039_0018997 Ga0501039_0018997_1836_2951 361
206 3300049576 Ga0501040_0004569 Ga0501040_0004569_4519_5634 361
207 3300049577 Ga0501041_0003724 Ga0501041_0003724_2563_3678 361
208 3300049578 Ga0501042_0013988 Ga0501042_0013988_263_1378 361
209 3300049579 Ga0501043_0036457 Ga0501043_0036457_430_1545 361
210 3300049580 Ga0501046_0040896 Ga0501046_0040896_2324_3439 361
211 3300049581 Ga0501047_0059138 Ga0501047_0059138_2324_3439 361
212 3300049583 Ga0501067_0002254 Ga0501067_0002254_5601_6716 361
213 3300049586 Ga0501070_0045273 Ga0501070_0045273_2324_3439 361
214 3300049587 Ga0501071_0005879 Ga0501071_0005879_5583_6698 361
215 3300049588 Ga0501072_0000317 Ga0501072_0000317_27739_28854 361
216 3300049589 Ga0501073_0102190 Ga0501073_0102190_263_1378 361
217 3300049590 Ga0501074_0007301 Ga0501074_0007301_2619_3734 361
218 3300049592 Ga0501076_0014122 Ga0501076_0014122_2146_3261 361
219 3300049593 Ga0501077_0011094 Ga0501077_0011094_510_1625 361
220 3300049741 Ga0501079_0006382 Ga0501079_0006382_7352_8467 361
221 3300049743 Ga0501081_0148146 Ga0501081_0148146_331_1446 361
222 3300049744 Ga0501083_0003239 Ga0501083_0003239_4404_5519 361
223 3300049822 Ga0501035_0010090 Ga0501035_0010090_1196_2305 361
224 3300049822 Ga0501035_0051126 Ga0501035_0051126_2324_3439 361
225 3300049823 Ga0501044_0063148 Ga0501044_0063148_346_1461 361
226 3300049823 Ga0501044_0071092 Ga0501044_0071092_458_1567 361
227 3300049824 Ga0501045_0009258 Ga0501045_0009258_3450_4565 361
228 3300053109 Ga0500569_006344 Ga0500569_006344_1318_2424 361
229 3300053149 Ga0500600_0062626 Ga0500600_0062626_312_1418 361
230 3300054114 Ga0501084_0014370 Ga0501084_0014370_5060_6175 361
231 3300059492 Ga0587073_0014239 Ga0587073_0014239_229_1350 361
232 3300060353 Ga0501082_0002650 Ga0501082_0002650_9410_10525 361
233 3300061734 Ga0530510_0155740 Ga0530510_0155740_193_1308 361
234 iso_pu_bacteria 2946072368 2946075212 361
235 3300003320 rootH2_10029378 rootH2_100293782 362
236 3300031852 Ga0307410_10086216 Ga0307410_100862162 362
237 3300031901 Ga0307406_10021344 Ga0307406_100213442 362
238 3300032002 Ga0307416_100080224 Ga0307416_1000802241 362
239 3300042007 Ga0439449_0002999 Ga0439449_0002999_2990_4084 362
240 3300044656 Ga0466969_0008743 Ga0466969_0008743_1775_2887 362
241 3300046492 Ga0495585_0004577 Ga0495585_0004577_3927_5039 362
242 3300046533 Ga0495640_0018697 Ga0495640_0018697_2376_3497 362
243 3300046543 Ga0495645_0187720 Ga0495645_0187720_209_1321 362
244 3300046689 Ga0495613_0003133 Ga0495613_0003133_10235_11356 362
245 3300047317 Ga0495604_0003001 Ga0495604_0003001_4262_5383 362
246 3300047321 Ga0495676_0002937 Ga0495676_0002937_3131_4252 362
247 3300047444 Ga0495675_0043448 Ga0495675_0043448_371_1483 362
248 3300048909 Ga0496106_0028187 Ga0496106_0028187_1943_3169 362
249 3300049824 Ga0501045_0180048 Ga0501045_0180048_292_1401 362
250 3300053107 Ga0500560_056457 Ga0500560_056457_89_1261 362
251 3300061719 Ga0466962_0004198 Ga0466962_0004198_2463_3575 362

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01041

DegT_DnrJ_EryC1

DegT/DnrJ/EryC1/StrS aminotransferase family

50

402

0.96

PF00155

Aminotran_1_2

Aminotransferase class I and II

64

199

0.89

PF01212

Beta_elim_lyase

Beta-eliminating lyase

68

321

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
3frk-assembly1.cif.gz_B x-ray structure of qdtb from t. thermosaccharolyticum in complex with a plp:tdp-3-aminoquinovose aldimine 0.9804 19 360
7b0d-assembly1.cif.gz_B sugar transaminase from archaeoglobus veneficus 0.9791 18 357
3nys-assembly1.cif.gz_A x-ray structure of the k185a mutant of wbpe (wlbe) from pseudomonas aeruginosa in complex with plp at 1.45 angstrom resolution 0.9758 19 358
3nu7-assembly1.cif.gz_A wbpe, an aminotransferase from pseudomonas aeruginosa involved in o-antigen assembly in complex with the cofactor pmp 0.9736 19 357
7n63-assembly1.cif.gz_A-2 x-ray structure of hcan_0200, an aminotransferase from helicobacter canadensis in complex with its external aldimine 0.9712 19 358
ID Description Score Start End Superfamily
2ogeD01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9733 19 244 3.40.640.10
5u1zA01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9724 19 244 3.40.640.10
3bn1B01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9678 12 244 3.40.640.10
af_Q58466_2_255_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9663 6 244 3.40.640.10
4lc3B01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.965 8 244 3.40.640.10
ID Description Score Start End GO Terms
AF-A0A2M8Q735-F1-model_v4 Aminotransferase DegT 0.9926 18 153 GO:0000271
GO:0008483
GO:0030170
AF-X1L0T4-F1-model_v4 Aminotransferase class I/classII domain-containing protein 0.9916 43 164 GO:0000271
GO:0008483
GO:0030170
AF-A0A535GJ50-F1-model_v4 Aminotransferase class V-fold PLP-dependent enzyme 0.9911 16 163 GO:0000271
GO:0008483
GO:0030170
AF-A0A358SSV1-F1-model_v4 DegT/DnrJ/EryC1/StrS family aminotransferase 0.9903 19 262 GO:0000271
GO:0008483
GO:0030170
AF-A0A383B0N6-F1-model_v4 Aminotransferase class I/classII domain-containing protein 0.9898 15 177 GO:0000271
GO:0008483
GO:0030170

Feature Viewer

pLDDT pTM Quality
95.86 0.93 High
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Predicted Structure (AlphaFold2)

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