F362658

General Info

Members Datasets Scaffolds Average Seq Length
251 200 231 282

Family's Representative Sequence

Representative Sequence 3300046492|Ga0495585_0093013|Ga0495585_0093013_595_1608
Length 337
Sequence MGNFCRPDTPGHLHLSTKQFELYNKMWPRCSPDICINKQIKRDMKKIWFITGSSRGLGRSLTAAVLAKGDKVAATARNPEQLQDFIDKYPDQVLPIQLDVTSQQQINAAIESTIQHFGRIDVLVNNAGFGITGAAEAYTDEQVHSQLDTNLLAPIAITRAALPHMRKQRSGHILQISSIGGRVGSGGVSIYQAAKFGLSGFSEGLAQEVAPLGIKVIVIEPGGFRTDWAGDSMTYAKSIEGYEATVEKRAAFFKSGNFKPVGDPDKAAKVMLEIVDHPQPPLHLILGSEGLAIVKASDTAKMAELDKWAPLSISTDHDESENFFESEQGKAYLTLKK

Samples

Sample ID Description Type Environment
1 2501025502 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
2 2510917013 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
3 2582581278 Chryseobacterium sp. CF365 Isolate Rhizosphere
4 2599185236 Rhizobium sp. NFR07 Isolate Rhizoplane
5 2718218334 Luteibacter rhizovicinus LJ96 Isolate Rhizosphere
6 2738543009 Luteibacter sp. OK325 Isolate Unclassified
7 2739367874 Chryseobacterium sp. T16E-39 Isolate Unclassified
8 2744054900 Paraburkholderia ginsengiterrae DCY85-1 Isolate Unclassified
9 2744054901 Paraburkholderia ginsengiterrae DCY85 Isolate Unclassified
10 2751185846 Paraburkholderia ribeironis STM 7296 Isolate Unclassified
11 2791355199
12 2842324504 Paraburkholderia fungorum SEMIA 4007 Isolate Nodule
13 2842454564 Paraburkholderia fungorum SEMIA 4056 Isolate Nodule
14 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
15 2884791551 Chitinophaga oryzae 1310 Isolate Unclassified
16 2914759650 Rhizosphaericola mali Isolate Rhizosphere
17 2919692658 Algoriphagus sp. 4150 Isolate Rhizosphere
18 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
19 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
20 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
21 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
22 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
23 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
24 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
25 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
26 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
27 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
28 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
29 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
30 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
31 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
32 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
33 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
34 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
35 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
36 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
37 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
38 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
39 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
40 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
41 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
42 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
43 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
44 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
45 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
46 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
47 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
48 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
49 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
50 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
51 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
52 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
53 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
54 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
55 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
56 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
57 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
59 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
60 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
61 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
62 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
63 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
64 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
65 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
66 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
67 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
68 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
69 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
70 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
71 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
72 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
86 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
87 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
88 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
89 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
90 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
91 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
92 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
93 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
94 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
95 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
96 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
97 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
98 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
99 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
100 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
101 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
102 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
103 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
104 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
105 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
106 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
107 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
108 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
109 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
110 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
111 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
112 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
113 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
114 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
115 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
116 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
117 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
118 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
119 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
120 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
121 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
122 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
123 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
124 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
125 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
126 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
127 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
128 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
129 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
130 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
131 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
132 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
133 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
134 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
135 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
136 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
137 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
138 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
139 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
140 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
141 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
142 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
143 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
144 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
145 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
146 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
147 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
148 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
149 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
150 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
151 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
152 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
153 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
154 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
155 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
156 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
157 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
158 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
159 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
160 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
161 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
162 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
163 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
164 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
165 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
166 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
167 3300048986 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1E Metagenome Unclassified
168 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
169 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
170 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
171 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
173 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
174 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
175 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
176 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
177 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
178 3300049683 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_B_3_control Metagenome Rhizosphere
179 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
180 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
181 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
182 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
183 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
184 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
185 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
186 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
187 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
188 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
189 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
190 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
191 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
192 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
193 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
194 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
195 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
196 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
197 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
198 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
199 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
200 8039098773 Burkholderia multivorans MSMB612WGS Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 92.4
Metatranscriptomes 0
Isolates 7.6

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 16.33
Nodule 0.8
Rhizoplane 6.37
Rhizosphere 60.16
Stem 0
Stem Tuber 0
Unclassified 16.33

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24737J22298_10044546 3300001990 Bacteria 1356
2 JGI24735J21928_10001594 3300002067 Bacteria 8045
3 JGI25152J39213_1000129 3300002773 Bacteria 51667
4 JGI25150J39212_1000004 3300002774 Bacteria 417320
5 JGI25151J46595_10000002 3300003187 Bacteria 731381
6 JGI25153J46596_10000037 3300003215 Bacteria 182199
7 rootH1_10114088 3300003316 Bacteria 2852
8 rootH2_10184519 3300003320 Bacteria 1280
9 rootL2_10041605 3300003322 Bacteria 8389
10 rootL2_10085580 3300003322 Bacteria 3563
11 rootL2_10258985 3300003322 Bacteria 1604
12 rootH1_10176579 3300003323 Bacteria 2425
13 JGI25160J50197_1000697 3300003354 Bacteria 18541
14 JGI25160J50197_1001023 3300003354 Bacteria 14494
15 JGI25160J50197_1001683 3300003354 Bacteria 10776
16 Ga0055524_1003823 3300003775 Bacteria 7149
17 Ga0065714_10002207 3300005288 Bacteria 86097
18 Ga0065714_10071464 3300005288 Bacteria 3571
19 Ga0065704_10070140 3300005289 Bacteria 482257
20 Ga0070682_100018413 3300005337 Bacteria 4082
21 Ga0070682_100074066 3300005337 Bacteria 2186
22 Ga0070661_100010739 3300005344 Bacteria 6373
23 Ga0070661_100123200 3300005344 Bacteria 1943
24 Ga0070669_100230370 3300005353 Bacteria 1468
25 Ga0070671_100205563 3300005355 Bacteria 1670
26 Ga0070714_100046185 3300005435 Bacteria 3693
27 Ga0070714_100256256 3300005435 Bacteria 1619
28 Ga0070708_100038034 3300005445 Bacteria 4201
29 Ga0070663_100017810 3300005455 Bacteria 4644
30 Ga0070699_100000063 3300005518 Bacteria 100440
31 Ga0068853_100064949 3300005539 Bacteria 3166
32 Ga0070665_100037123 3300005548 Bacteria 4900
33 Ga0068855_100000284 3300005563 Bacteria 62592
34 Ga0068857_100072446 3300005577 Unclassified 3070
35 Ga0068856_100053472 3300005614 Bacteria 3981
36 Ga0081540_1003098 3300005983 Bacteria 13318
37 Ga0081540_1004039 3300005983 Bacteria 11363
38 Ga0081540_1010848 3300005983 Bacteria 6125
39 Ga0070717_10000445 3300006028 Bacteria 26264
40 Ga0075365_10163973 3300006038 Bacteria 1549
41 Ga0075368_10016581 3300006042 Bacteria 2747
42 Ga0075363_100004144 3300006048 Bacteria 6294
43 Ga0075367_10010038 3300006178 Bacteria 4963
44 Ga0075366_10002561 3300006195 Bacteria 9346
45 Ga0075370_10148154 3300006353 Bacteria 1375
46 Ga0105251_10005979 3300009011 Bacteria 7852
47 Ga0105240_10000932 3300009093 Bacteria 52011
48 Ga0105240_10215681 3300009093 Bacteria 2239
49 Ga0111539_10366158 3300009094 Bacteria 1678
50 Ga0105241_10070509 3300009174 Unclassified 2712
51 Ga0105237_10005293 3300009545 Bacteria 14589
52 Ga0105237_10021354 3300009545 Bacteria 6656
53 Ga0157373_10073859 3300013100 Unclassified 2406
54 Ga0157370_10117281 3300013104 Bacteria 2487
55 Ga0157374_10019737 3300013296 Bacteria 5971
56 Ga0157374_10048707 3300013296 Bacteria 3933
57 Ga0163162_10175895 3300013306 Bacteria 2266
58 Ga0157375_10000913 3300013308 Bacteria 25691
59 Ga0163163_10308479 3300014325 Bacteria 1635
60 Ga0207425_1000003 3300025245 Bacteria 1145342
61 Ga0209646_1001042 3300025246 Bacteria 8363
62 Ga0209129_1000022 3300025258 Bacteria 440876
63 Ga0209025_1000007 3300025294 Bacteria 1145109
64 Ga0209025_1000838 3300025294 Bacteria 48812
65 Ga0209758_1000012 3300025297 Bacteria 949866
66 Ga0207426_1000002 3300025302 Bacteria 1249660
67 Ga0207426_1000217 3300025302 Bacteria 136180
68 Ga0207426_1004465 3300025302 Bacteria 6810
69 Ga0207713_1005740 3300025735 Bacteria 7694
70 Ga0207647_10014757 3300025904 Bacteria 5378
71 Ga0207654_10081205 3300025911 Unclassified 1951
72 Ga0207695_10000906 3300025913 Bacteria 53378
73 Ga0207695_10198990 3300025913 Bacteria 1918
74 Ga0207671_10007154 3300025914 Bacteria 9736
75 Ga0207693_10247702 3300025915 Bacteria 1398
76 Ga0207649_10120865 3300025920 Bacteria 1765
77 Ga0207711_10286340 3300025941 Bacteria 1518
78 Ga0207667_10040418 3300025949 Bacteria 4966
79 Ga0207678_10021347 3300026067 Bacteria 5678
80 Ga0207702_10016578 3300026078 Bacteria 6097
81 Ga0207702_10020358 3300026078 Bacteria 5496
82 Ga0207641_10103578 3300026088 Bacteria 2511
83 Ga0268266_10004233 3300028379 Bacteria 13817
84 Ga0265319_1000049 3300028563 Bacteria 98925
85 Ga0265318_10003229 3300028577 Bacteria 8307
86 Ga0307517_10224488 3300028786 Bacteria 1136
87 Ga0307515_10000181 3300028794 Bacteria 154316
88 Ga0307515_10052269 3300028794 Bacteria 6064
89 Ga0265320_10034634 3300031240 Bacteria 2566
90 Ga0307513_10029229 3300031456 Bacteria 6288
91 Ga0307509_10102999 3300031507 Bacteria 2884
92 Ga0307408_100070412 3300031548 Bacteria 2582
93 Ga0265313_10037986 3300031595 Bacteria 2402
94 Ga0265314_10002476 3300031711 Bacteria 18861
95 Ga0307414_10076584 3300032004 Bacteria 2431
96 Ga0307507_10000509 3300033179 Bacteria 81904
97 Ga0373937_0083351 3300036401 Bacteria 2958
98 Ga0395901_0205461 3300038443 Bacteria 2064
99 Ga0436361_1142828 3300039447 Unclassified 2045
100 Ga0439439_0043622 3300041406 Bacteria 1167
101 Ga0439457_010578 3300042014 Bacteria 2118
102 Ga0450908_000054 3300042184 Bacteria 22560
103 Ga0451577_0416907 3300042876 Bacteria 1219
104 Ga0466972_0000047 3300044658 Bacteria 122901
105 Ga0466972_0003378 3300044658 Bacteria 7910
106 Ga0466971_0021505 3300044719 Bacteria 2871
107 Ga0466968_0012371 3300044735 Bacteria 3340
108 Ga0466968_0049868 3300044735 Bacteria 1784
109 Ga0466957_0240763 3300044842 Bacteria 1200
110 Ga0466967_0116566 3300045976 Bacteria 2461
111 Ga0466967_0589130 3300045976 Bacteria 1097
112 Ga0495617_000038 3300046452 Bacteria 132535
113 Ga0495592_0383961 3300046454 Bacteria 893
114 Ga0495590_0003535 3300046457 Bacteria 6368
115 Ga0495651_0000997 3300046462 Bacteria 21966
116 Ga0495651_0055323 3300046462 Bacteria 3049
117 Ga0495650_0075187 3300046471 Bacteria 1315
118 Ga0495605_0008751 3300046474 Bacteria 5713
119 Ga0495584_0012038 3300046491 Bacteria 4423
120 Ga0495585_0093013 3300046492 Bacteria 1622
121 Ga0495596_0095847 3300046500 Bacteria 1152
122 Ga0495607_0082976 3300046501 Bacteria 1757
123 Ga0495606_0000194 3300046507 Bacteria 106498
124 Ga0495606_0012039 3300046507 Bacteria 6981
125 Ga0495606_0013288 3300046507 Bacteria 6524
126 Ga0495606_0066494 3300046507 Bacteria 2286
127 Ga0495620_0000016 3300046515 Bacteria 153638
128 Ga0495628_0005003 3300046516 Bacteria 11646
129 Ga0495628_0005596 3300046516 Bacteria 11000
130 Ga0495632_0037401 3300046519 Bacteria 2463
131 Ga0495648_0007711 3300046524 Bacteria 8575
132 Ga0495648_0023675 3300046524 Bacteria 4199
133 Ga0495663_0002653 3300046525 Bacteria 5334
134 Ga0495652_0001679 3300046529 Bacteria 24013
135 Ga0495652_0003869 3300046529 Bacteria 14597
136 Ga0495654_0000017 3300046530 Bacteria 295999
137 Ga0495587_0103423 3300046536 Bacteria 1640
138 Ga0495609_0004269 3300046538 Bacteria 7887
139 Ga0495597_0005096 3300046542 Bacteria 7014
140 Ga0495645_0069253 3300046543 Bacteria 2547
141 Ga0495622_0024583 3300046557 Bacteria 2813
142 Ga0495633_0000101 3300046558 Bacteria 116147
143 Ga0495668_0000112 3300046616 Bacteria 128501
144 Ga0495625_0002062 3300046660 Bacteria 22520
145 Ga0495625_0003446 3300046660 Bacteria 15773
146 Ga0495625_0022598 3300046660 Bacteria 4819
147 Ga0495599_0017086 3300046678 Bacteria 4508
148 Ga0495658_0040699 3300046683 Bacteria 2585
149 Ga0495669_0174838 3300046684 Bacteria 1022
150 Ga0495671_0066663 3300046692 Bacteria 1771
151 Ga0495671_0100764 3300046692 Bacteria 1412
152 Ga0495649_0122283 3300046694 Bacteria 1376
153 Ga0495660_0020226 3300046810 Bacteria 3815
154 Ga0495604_0031129 3300047317 Bacteria 4234
155 Ga0495672_0016685 3300047320 Bacteria 4934
156 Ga0495672_0016871 3300047320 Bacteria 4901
157 Ga0495672_0027044 3300047320 Bacteria 3651
158 Ga0495683_0003355 3300047323 Bacteria 9361
159 Ga0495687_000739 3300047443 Bacteria 35614
160 Ga0495686_0000040 3300047472 Bacteria 301210
161 Ga0495686_0000044 3300047472 Bacteria 288079
162 Ga0495686_0034140 3300047472 Bacteria 3278
163 Ga0495686_0079974 3300047472 Bacteria 1999
164 Ga0496100_0163234 3300048903 Bacteria 1598
165 Ga0496100_0187810 3300048903 Bacteria 1498
166 Ga0496101_0009576 3300048904 Bacteria 6372
167 Ga0496102_0021393 3300048905 Bacteria 5719
168 Ga0496103_0003563 3300048906 Bacteria 9509
169 Ga0496104_0253894 3300048907 Bacteria 1671
170 Ga0496105_0080331 3300048908 Bacteria 2693
171 Ga0496106_0004358 3300048909 Bacteria 10513
172 Ga0496107_0022764 3300048910 Bacteria 4429
173 Ga0496107_0055546 3300048910 Bacteria 2860
174 Ga0496108_0090961 3300048911 Bacteria 2594
175 Ga0496110_0368142 3300048913 Bacteria 1309
176 Ga0496111_0001273 3300048914 Bacteria 14124
177 Ga0496111_0006429 3300048914 Bacteria 7628
178 Ga0496113_0004013 3300048916 Bacteria 8952
179 Ga0496116_0006271 3300048919 Bacteria 10835
180 Ga0496117_0008943 3300048920 Bacteria 9431
181 Ga0496117_0031676 3300048920 Bacteria 4032
182 Ga0496118_0007847 3300048921 Bacteria 11191
183 Ga0496120_0050228 3300048923 Bacteria 2389
184 Ga0496121_0008571 3300048924 Bacteria 11978
185 Ga0496121_0009032 3300048924 Bacteria 11550
186 Ga0496121_0011030 3300048924 Bacteria 10085
187 Ga0496121_0029653 3300048924 Bacteria 5050
188 Ga0496121_0104691 3300048924 Bacteria 2173
189 Ga0496122_0017405 3300048925 Bacteria 6721
190 Ga0496123_0042066 3300048926 Bacteria 3159
191 Ga0496123_0064297 3300048926 Bacteria 2339
192 Ga0496124_0007984 3300048927 Bacteria 11139
193 Ga0496124_0149178 3300048927 Bacteria 1837
194 Ga0496125_0011585 3300048928 Bacteria 8810
195 Ga0496125_0040282 3300048928 Bacteria 4010
196 Ga0466983_0117667 3300048986 Bacteria 2203
197 Ga0495682_0030034 3300049460 Bacteria 2012
198 Ga0501031_0090300 3300049568 Bacteria 1998
199 Ga0501034_0362952 3300049571 Unclassified 1375
200 Ga0501038_0136413 3300049574 Bacteria 2010
201 Ga0501039_0076405 3300049575 Bacteria 2604
202 Ga0501046_0031983 3300049580 Bacteria 4262
203 Ga0501047_0031331 3300049581 Bacteria 5128
204 Ga0501047_0054243 3300049581 Bacteria 3877
205 Ga0501048_0122607 3300049582 Bacteria 1837
206 Ga0501074_0418790 3300049590 Bacteria 950
207 Ga0501217_017584 3300049661 Bacteria 1650
208 Ga0501253_037711 3300049683 Bacteria 958
209 Ga0501257_009029 3300049686 Unclassified 2247
210 Ga0501035_0000569 3300049822 Bacteria 40808
211 Ga0501044_0013459 3300049823 Bacteria 8847
212 nmdc:mga03n38_1304_c1 3300050490 Bacteria 7037
213 nmdc:mga03n38_41892_c1 3300050490 Bacteria 1999
214 nmdc:mga00v17_193707_c1 3300050491 Bacteria 1313
215 nmdc:mga0yw44_95040_c1 3300050492 Bacteria 1890
216 nmdc:mga0k408_347_c1 3300050493 Bacteria 25309
217 nmdc:mga06z11_745_c1 3300050494 Bacteria 11859
218 nmdc:mga07m45_7770_c1 3300050496 Bacteria 5489
219 Ga0500578_0000765 3300053086 Bacteria 37890
220 Ga0500566_0004280 3300053094 Bacteria 8521
221 Ga0500641_0012676 3300053096 Bacteria 3085
222 Ga0500593_000141 3300053117 Bacteria 28781
223 Ga0500595_003907 3300053119 Bacteria 6837
224 Ga0500595_020373 3300053119 Bacteria 2388
225 Ga0500618_000238 3300053125 Bacteria 43564
226 Ga0500568_0013441 3300053139 Bacteria 3730
227 Ga0500604_0038025 3300053151 Bacteria 1442
228 Ga0500622_0016379 3300053156 Bacteria 3962
229 Ga0500633_0068194 3300053160 Bacteria 1266
230 Ga0500636_0115951 3300053177 Bacteria 1508
231 Ga0530510_0501737 3300061734 Bacteria 920

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046474 Ga0495605_0008751 Ga0495605_0008751_2557_3279 217
2 3300046692 Ga0495671_0066663 Ga0495671_0066663_704_1426 217
3 3300046810 Ga0495660_0020226 Ga0495660_0020226_1522_2244 217
4 3300047320 Ga0495672_0016685 Ga0495672_0016685_3011_3733 217
5 3300047320 Ga0495672_0016871 Ga0495672_0016871_3031_3753 217
6 3300047472 Ga0495686_0079974 Ga0495686_0079974_110_832 217
7 3300049581 Ga0501047_0031331 Ga0501047_0031331_252_1136 228
8 3300046454 Ga0495592_0383961 Ga0495592_0383961_43_861 232
9 3300045976 Ga0466967_0116566 Ga0466967_0116566_1301_2158 238
10 3300003322 rootL2_10258985 rootL2_102589851 242
11 3300005337 Ga0070682_100074066 Ga0070682_1000740662 242
12 3300005344 Ga0070661_100123200 Ga0070661_1001232002 242
13 3300005455 Ga0070663_100017810 Ga0070663_1000178102 242
14 3300005548 Ga0070665_100037123 Ga0070665_1000371235 242
15 3300006042 Ga0075368_10016581 Ga0075368_100165814 242
16 3300006048 Ga0075363_100004144 Ga0075363_1000041442 242
17 3300006178 Ga0075367_10010038 Ga0075367_100100385 242
18 3300014325 Ga0163163_10308479 Ga0163163_103084792 242
19 3300026067 Ga0207678_10021347 Ga0207678_100213475 242
20 3300028379 Ga0268266_10004233 Ga0268266_1000423315 242
21 3300028786 Ga0307517_10224488 Ga0307517_102244882 244
22 3300046471 Ga0495650_0075187 Ga0495650_0075187_338_1177 244
23 3300046684 Ga0495669_0174838 Ga0495669_0174838_16_855 244
24 3300049581 Ga0501047_0054243 Ga0501047_0054243_642_1487 244
25 3300009094 Ga0111539_10366158 Ga0111539_103661582 245
26 3300047320 Ga0495672_0027044 Ga0495672_0027044_898_1881 246
27 3300048903 Ga0496100_0187810 Ga0496100_0187810_476_1366 247
28 3300048907 Ga0496104_0253894 Ga0496104_0253894_250_1140 247
29 3300048910 Ga0496107_0055546 Ga0496107_0055546_1825_2715 247
30 3300050490 nmdc:mga03n38_1304_c1 nmdc:mga03n38_1304_c1_2761_3651 247
31 3300050491 nmdc:mga00v17_193707_c1 nmdc:mga00v17_193707_c1_192_1082 247
32 3300050492 nmdc:mga0yw44_95040_c1 nmdc:mga0yw44_95040_c1_813_1703 247
33 3300050494 nmdc:mga06z11_745_c1 nmdc:mga06z11_745_c1_9144_10034 247
34 3300050496 nmdc:mga07m45_7770_c1 nmdc:mga07m45_7770_c1_4498_5388 247
35 3300003354 JGI25160J50197_1000697 JGI25160J50197_100069714 248
36 3300003354 JGI25160J50197_1001023 JGI25160J50197_100102312 248
37 3300003354 JGI25160J50197_1001683 JGI25160J50197_10016837 248
38 3300006353 Ga0075370_10148154 Ga0075370_101481542 248
39 3300025302 Ga0207426_1000217 Ga0207426_100021754 248
40 3300046462 Ga0495651_0055323 Ga0495651_0055323_992_1816 249
41 3300046516 Ga0495628_0005596 Ga0495628_0005596_8748_9572 249
42 3300046529 Ga0495652_0003869 Ga0495652_0003869_1973_2797 249
43 3300047317 Ga0495604_0031129 Ga0495604_0031129_2284_3108 249
44 3300053096 Ga0500641_0012676 Ga0500641_0012676_704_1543 249
45 iso_pu_bacteria 2718218334 2721029439 249
46 iso_pu_bacteria 2738543009 2739227906 249
47 iso_pu_bacteria 2914759650 2914762842 249
48 iso_pu_bacteria 2928078545 2928081412 249
49 iso_pu_bacteria 2862281513 2862285128 250
50 iso_pu_bacteria 2599185236 2599719209 251
51 iso_pu_bacteria 2884791551 2884793482 251
52 iso_pu_bacteria 2919692658 2919692999 251
53 3300006028 Ga0070717_10000445 Ga0070717_1000044519 252
54 iso_pu_bacteria 2582581278 2585144693 252
55 3300002773 JGI25152J39213_1000129 JGI25152J39213_100012910 253
56 3300002774 JGI25150J39212_1000004 JGI25150J39212_100000443 253
57 3300003187 JGI25151J46595_10000002 JGI25151J46595_10000002582 253
58 3300003215 JGI25153J46596_10000037 JGI25153J46596_1000003743 253
59 3300003323 rootH1_10176579 rootH1_101765792 253
60 3300005337 Ga0070682_100018413 Ga0070682_1000184134 253
61 3300005344 Ga0070661_100010739 Ga0070661_1000107393 253
62 3300009093 Ga0105240_10000932 Ga0105240_1000093225 253
63 3300013306 Ga0163162_10175895 Ga0163162_101758952 253
64 3300013308 Ga0157375_10000913 Ga0157375_100009134 253
65 3300025245 Ga0207425_1000003 Ga0207425_1000003267 253
66 3300025258 Ga0209129_1000022 Ga0209129_1000022267 253
67 3300025294 Ga0209025_1000007 Ga0209025_1000007266 253
68 3300025297 Ga0209758_1000012 Ga0209758_1000012267 253
69 3300025913 Ga0207695_10000906 Ga0207695_1000090627 253
70 3300025920 Ga0207649_10120865 Ga0207649_101208652 253
71 3300042184 Ga0450908_000054 Ga0450908_000054_14975_15799 253
72 3300046452 Ga0495617_000038 Ga0495617_000038_74354_75178 253
73 3300046501 Ga0495607_0082976 Ga0495607_0082976_427_1251 253
74 3300046507 Ga0495606_0000194 Ga0495606_0000194_78330_79154 253
75 3300046515 Ga0495620_0000016 Ga0495620_0000016_95476_96300 253
76 3300046660 Ga0495625_0022598 Ga0495625_0022598_1520_2344 253
77 3300048924 Ga0496121_0104691 Ga0496121_0104691_746_1570 253
78 3300048927 Ga0496124_0149178 Ga0496124_0149178_629_1516 253
79 3300048928 Ga0496125_0040282 Ga0496125_0040282_627_1517 253
80 3300003322 rootL2_10085580 rootL2_100855804 254
81 3300005288 Ga0065714_10002207 Ga0065714_1000220758 254
82 3300005288 Ga0065714_10071464 Ga0065714_100714642 254
83 3300005353 Ga0070669_100230370 Ga0070669_1002303701 254
84 3300005445 Ga0070708_100038034 Ga0070708_1000380344 254
85 3300006195 Ga0075366_10002561 Ga0075366_100025614 254
86 3300013100 Ga0157373_10073859 Ga0157373_100738592 254
87 3300013104 Ga0157370_10117281 Ga0157370_101172812 254
88 3300025302 Ga0207426_1000002 Ga0207426_1000002232 254
89 3300026078 Ga0207702_10016578 Ga0207702_100165785 254
90 3300028794 Ga0307515_10000181 Ga0307515_100001815 254
91 3300028794 Ga0307515_10052269 Ga0307515_100522694 254
92 3300031548 Ga0307408_100070412 Ga0307408_1000704121 254
93 3300032004 Ga0307414_10076584 Ga0307414_100765843 254
94 3300033179 Ga0307507_10000509 Ga0307507_100005098 254
95 3300046462 Ga0495651_0000997 Ga0495651_0000997_6087_6926 254
96 3300046492 Ga0495585_0093013 Ga0495585_0093013_595_1608 254
97 3300046507 Ga0495606_0012039 Ga0495606_0012039_3950_4846 254
98 3300046524 Ga0495648_0007711 Ga0495648_0007711_7082_7966 254
99 3300046525 Ga0495663_0002653 Ga0495663_0002653_1384_2280 254
100 3300046529 Ga0495652_0001679 Ga0495652_0001679_12622_13461 254
101 3300046530 Ga0495654_0000017 Ga0495654_0000017_278619_279515 254
102 3300046536 Ga0495587_0103423 Ga0495587_0103423_732_1571 254
103 3300046538 Ga0495609_0004269 Ga0495609_0004269_4533_5417 254
104 3300046543 Ga0495645_0069253 Ga0495645_0069253_787_1626 254
105 3300046557 Ga0495622_0024583 Ga0495622_0024583_1546_2430 254
106 3300046558 Ga0495633_0000101 Ga0495633_0000101_40110_41234 254
107 3300046616 Ga0495668_0000112 Ga0495668_0000112_90763_91647 254
108 3300046660 Ga0495625_0002062 Ga0495625_0002062_3116_4114 254
109 3300046660 Ga0495625_0003446 Ga0495625_0003446_12583_13467 254
110 3300046683 Ga0495658_0040699 Ga0495658_0040699_609_1547 254
111 3300049460 Ga0495682_0030034 Ga0495682_0030034_1110_1994 254
112 3300049661 Ga0501217_017584 Ga0501217_017584_468_1352 254
113 3300049683 Ga0501253_037711 Ga0501253_037711_19_903 254
114 3300049686 Ga0501257_009029 Ga0501257_009029_789_1673 254
115 3300050490 nmdc:mga03n38_41892_c1 nmdc:mga03n38_41892_c1_660_1499 254
116 3300050493 nmdc:mga0k408_347_c1 nmdc:mga0k408_347_c1_17407_18333 254
117 3300053125 Ga0500618_000238 Ga0500618_000238_39503_40414 254
118 3300053151 Ga0500604_0038025 Ga0500604_0038025_119_997 254
119 iso_pu_bacteria 2929239360 2929242331 254
120 3300003320 rootH2_10184519 rootH2_101845192 255
121 3300003775 Ga0055524_1003823 Ga0055524_10038238 255
122 3300005435 Ga0070714_100046185 Ga0070714_1000461854 255
123 3300005435 Ga0070714_100256256 Ga0070714_1002562562 255
124 3300005539 Ga0068853_100064949 Ga0068853_1000649492 255
125 3300005563 Ga0068855_100000284 Ga0068855_10000028451 255
126 3300005577 Ga0068857_100072446 Ga0068857_1000724462 255
127 3300005614 Ga0068856_100053472 Ga0068856_1000534721 255
128 3300005983 Ga0081540_1003098 Ga0081540_10030986 255
129 3300009093 Ga0105240_10215681 Ga0105240_102156815 255
130 3300009174 Ga0105241_10070509 Ga0105241_100705092 255
131 3300009545 Ga0105237_10021354 Ga0105237_100213542 255
132 3300025911 Ga0207654_10081205 Ga0207654_100812052 255
133 3300025913 Ga0207695_10198990 Ga0207695_101989905 255
134 3300025915 Ga0207693_10247702 Ga0207693_102477022 255
135 3300025949 Ga0207667_10040418 Ga0207667_100404184 255
136 3300026078 Ga0207702_10020358 Ga0207702_100203583 255
137 3300038443 Ga0395901_0205461 Ga0395901_0205461_324_1160 255
138 3300044658 Ga0466972_0003378 Ga0466972_0003378_6140_6976 255
139 3300044735 Ga0466968_0012371 Ga0466968_0012371_1693_2529 255
140 3300044735 Ga0466968_0049868 Ga0466968_0049868_217_1053 255
141 3300046519 Ga0495632_0037401 Ga0495632_0037401_736_1575 255
142 3300046692 Ga0495671_0100764 Ga0495671_0100764_479_1318 255
143 3300047472 Ga0495686_0034140 Ga0495686_0034140_2389_3237 255
144 3300048914 Ga0496111_0001273 Ga0496111_0001273_2545_3414 255
145 3300048924 Ga0496121_0011030 Ga0496121_0011030_1000_1839 255
146 3300048924 Ga0496121_0029653 Ga0496121_0029653_4036_4866 255
147 3300049822 Ga0501035_0000569 Ga0501035_0000569_11597_12448 255
148 3300053119 Ga0500595_020373 Ga0500595_020373_19_849 255
149 3300009545 Ga0105237_10005293 Ga0105237_1000529311 256
150 3300013296 Ga0157374_10019737 Ga0157374_100197375 256
151 3300025246 Ga0209646_1001042 Ga0209646_10010424 256
152 3300025914 Ga0207671_10007154 Ga0207671_100071546 256
153 3300028563 Ga0265319_1000049 Ga0265319_100004955 256
154 3300028577 Ga0265318_10003229 Ga0265318_100032297 256
155 3300031240 Ga0265320_10034634 Ga0265320_100346342 256
156 3300031456 Ga0307513_10029229 Ga0307513_100292291 256
157 3300031595 Ga0265313_10037986 Ga0265313_100379862 256
158 3300031711 Ga0265314_10002476 Ga0265314_1000247612 256
159 3300044658 Ga0466972_0000047 Ga0466972_0000047_47166_48005 256
160 3300044842 Ga0466957_0240763 Ga0466957_0240763_226_1065 256
161 3300046507 Ga0495606_0013288 Ga0495606_0013288_1708_2544 256
162 3300046507 Ga0495606_0066494 Ga0495606_0066494_525_1400 256
163 3300046524 Ga0495648_0023675 Ga0495648_0023675_2283_3119 256
164 3300047443 Ga0495687_000739 Ga0495687_000739_5518_6354 256
165 3300047472 Ga0495686_0000040 Ga0495686_0000040_59944_60939 256
166 3300048920 Ga0496117_0008943 Ga0496117_0008943_1194_2045 256
167 3300048925 Ga0496122_0017405 Ga0496122_0017405_5682_6533 256
168 3300048926 Ga0496123_0064297 Ga0496123_0064297_1403_2254 256
169 3300049571 Ga0501034_0362952 Ga0501034_0362952_103_984 256
170 3300049823 Ga0501044_0013459 Ga0501044_0013459_3199_4080 256
171 3300053086 Ga0500578_0000765 Ga0500578_0000765_34307_35146 256
172 iso_pu_bacteria 2739367874 2740057837 256
173 3300003316 rootH1_10114088 rootH1_101140882 257
174 3300003322 rootL2_10041605 rootL2_100416054 257
175 3300005518 Ga0070699_100000063 Ga0070699_10000006316 257
176 3300005983 Ga0081540_1004039 Ga0081540_10040399 257
177 3300005983 Ga0081540_1010848 Ga0081540_10108482 257
178 3300006038 Ga0075365_10163973 Ga0075365_101639732 257
179 3300042876 Ga0451577_0416907 Ga0451577_0416907_32_877 257
180 3300005289 Ga0065704_10070140 Ga0065704_10070140410 258
181 3300025941 Ga0207711_10286340 Ga0207711_102863402 258
182 3300041406 Ga0439439_0043622 Ga0439439_0043622_297_1142 258
183 3300042014 Ga0439457_010578 Ga0439457_010578_1076_1921 258
184 3300045976 Ga0466967_0589130 Ga0466967_0589130_97_942 258
185 3300053117 Ga0500593_000141 Ga0500593_000141_1046_1918 258
186 3300053156 Ga0500622_0016379 Ga0500622_0016379_2317_3162 258
187 3300053139 Ga0500568_0013441 Ga0500568_0013441_2541_3392 260
188 3300053160 Ga0500633_0068194 Ga0500633_0068194_91_981 260
189 iso_pu_bacteria 2501025502 2501082909 260
190 iso_pu_bacteria 2510917013 2511091101 260
191 iso_pu_bacteria 2744054900 2746084755 260
192 iso_pu_bacteria 2744054901 2746093098 260
193 iso_pu_bacteria 2751185846 2753565914 260
194 iso_pu_bacteria 2791355199 2793078018 260
195 iso_pu_bacteria 2842324504 2842327289 260
196 iso_pu_bacteria 2842454564 2842458347 260
197 iso_pu_bacteria 8039098773 8039099629 260
198 3300039447 Ga0436361_1142828 Ga0436361_1142828_14_901 262
199 3300047472 Ga0495686_0000044 Ga0495686_0000044_123947_124798 262
200 3300049568 Ga0501031_0090300 Ga0501031_0090300_62_934 262
201 3300049574 Ga0501038_0136413 Ga0501038_0136413_946_1818 262
202 3300049575 Ga0501039_0076405 Ga0501039_0076405_140_1012 262
203 3300049580 Ga0501046_0031983 Ga0501046_0031983_1482_2354 262
204 3300049582 Ga0501048_0122607 Ga0501048_0122607_720_1592 262
205 3300049590 Ga0501074_0418790 Ga0501074_0418790_24_896 262
206 3300053119 Ga0500595_003907 Ga0500595_003907_1907_2794 262
207 3300061734 Ga0530510_0501737 Ga0530510_0501737_21_893 262
208 3300036401 Ga0373937_0083351 Ga0373937_0083351_803_1684 263
209 3300001990 JGI24737J22298_10044546 JGI24737J22298_100445462 264
210 3300002067 JGI24735J21928_10001594 JGI24735J21928_100015946 264
211 3300005355 Ga0070671_100205563 Ga0070671_1002055632 264
212 3300009011 Ga0105251_10005979 Ga0105251_100059794 264
213 3300013296 Ga0157374_10048707 Ga0157374_100487073 264
214 3300025294 Ga0209025_1000838 Ga0209025_100083818 264
215 3300025302 Ga0207426_1004465 Ga0207426_10044653 264
216 3300025735 Ga0207713_1005740 Ga0207713_10057406 264
217 3300025904 Ga0207647_10014757 Ga0207647_100147575 264
218 3300026088 Ga0207641_10103578 Ga0207641_101035782 264
219 3300031507 Ga0307509_10102999 Ga0307509_101029991 264
220 3300044719 Ga0466971_0021505 Ga0466971_0021505_798_1655 264
221 3300046457 Ga0495590_0003535 Ga0495590_0003535_4766_5665 264
222 3300046491 Ga0495584_0012038 Ga0495584_0012038_1548_2447 264
223 3300046500 Ga0495596_0095847 Ga0495596_0095847_74_982 264
224 3300046516 Ga0495628_0005003 Ga0495628_0005003_739_1596 264
225 3300046542 Ga0495597_0005096 Ga0495597_0005096_1112_2011 264
226 3300046678 Ga0495599_0017086 Ga0495599_0017086_1459_2316 264
227 3300046694 Ga0495649_0122283 Ga0495649_0122283_213_1112 264
228 3300047323 Ga0495683_0003355 Ga0495683_0003355_1371_2270 264
229 3300048903 Ga0496100_0163234 Ga0496100_0163234_44_943 264
230 3300048904 Ga0496101_0009576 Ga0496101_0009576_4247_5146 264
231 3300048905 Ga0496102_0021393 Ga0496102_0021393_853_1752 264
232 3300048906 Ga0496103_0003563 Ga0496103_0003563_4095_4994 264
233 3300048908 Ga0496105_0080331 Ga0496105_0080331_1675_2574 264
234 3300048909 Ga0496106_0004358 Ga0496106_0004358_4522_5421 264
235 3300048910 Ga0496107_0022764 Ga0496107_0022764_724_1623 264
236 3300048911 Ga0496108_0090961 Ga0496108_0090961_689_1588 264
237 3300048913 Ga0496110_0368142 Ga0496110_0368142_275_1174 264
238 3300048914 Ga0496111_0006429 Ga0496111_0006429_2832_3731 264
239 3300048916 Ga0496113_0004013 Ga0496113_0004013_5117_6016 264
240 3300048919 Ga0496116_0006271 Ga0496116_0006271_1988_2887 264
241 3300048920 Ga0496117_0031676 Ga0496117_0031676_1073_1972 264
242 3300048921 Ga0496118_0007847 Ga0496118_0007847_4247_5146 264
243 3300048923 Ga0496120_0050228 Ga0496120_0050228_1130_2038 264
244 3300048924 Ga0496121_0008571 Ga0496121_0008571_6472_7404 264
245 3300048924 Ga0496121_0009032 Ga0496121_0009032_2720_3619 264
246 3300048926 Ga0496123_0042066 Ga0496123_0042066_1831_2730 264
247 3300048927 Ga0496124_0007984 Ga0496124_0007984_6125_7024 264
248 3300048928 Ga0496125_0011585 Ga0496125_0011585_4972_5871 264
249 3300048986 Ga0466983_0117667 Ga0466983_0117667_83_940 264
250 3300053094 Ga0500566_0004280 Ga0500566_0004280_7209_8159 264
251 3300053177 Ga0500636_0115951 Ga0500636_0115951_368_1273 264

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

46

235

0.97

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

52

269

0.9

PF08659

KR

KR domain

47

225

0.89

PF13460

NAD_binding_10

NAD(P)H-binding

52

245

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
3m1a-assembly2.cif.gz_B the crystal structure of a short-chain dehydrogenase from streptomyces avermitilis to 2a 0.9203 11 261
3m1a-assembly6.cif.gz_J the crystal structure of a short-chain dehydrogenase from streptomyces avermitilis to 2a 0.9179 11 260
3m1a-assembly1.cif.gz_C the crystal structure of a short-chain dehydrogenase from streptomyces avermitilis to 2a 0.9142 11 261
3m1a-assembly4.cif.gz_E the crystal structure of a short-chain dehydrogenase from streptomyces avermitilis to 2a 0.9135 11 261
6le3-assembly1.cif.gz_F crystal structure of gluconate 5-dehydrogenase from lentibacter algarum 0.8976 9 174
ID Description Score Start End Superfamily
af_F4J128_251_373_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9809 71 166 3.40.50.720
af_Q54WM6_4_292_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9444 10 263 3.40.50.720
af_Q54WA9_4_295_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9361 10 262 3.40.50.720
af_Q75JD9_6_304_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9357 10 261 3.40.50.720
af_C7FZY1_11_303_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9282 11 261 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A0P8X700-F1-model_v4 Short chain dehydrogenase family protein 0.9897 60 263 GO:0016491
AF-A0A2V2AKF0-F1-model_v4 Short subunit dehydrogenase 0.9869 66 261 GO:0016491
AF-A0A7X0EWK2-F1-model_v4 NAD(P)-dependent dehydrogenase (Short-subunit alcohol dehydrogenase family) 0.9786 57 261 GO:0016491
AF-A2WIF3-F1-model_v4 deleted 0.9778 1 263
AF-A0A527Z2Z9-F1-model_v4 SDR family NAD(P)-dependent oxidoreductase 0.9754 60 222 GO:0016491

Feature Viewer

pLDDT pTM Quality
92.58 0.9 High
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Predicted Structure (AlphaFold2)

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