F361837

General Info

Members Datasets Scaffolds Average Seq Length
250 185 220 599

Family's Representative Sequence

Representative Sequence 3300046471|Ga0495650_0000017|Ga0495650_0000017_53237_55195
Length 652
Sequence MNPGLLGNERLIDRLAGFLQKIANNGSARRRTILDNREGARGVAISGAWVSRSAGAAVVAAAITTAGFAQSATPVHPAYLDRAPRDEVIYFVLPDRFANGDAANDRGGLVGDRLKTGFDPADKGFYHGGDLAGLTARLDYIQGLGATTIWLGPIFRNKVVQGPPGQESAGYHGYWITDFTDVDPHFGTRAQMKAFLDAAHARGLKVYLDIVANHTADVIQYRDCPVGGCDYRSKADYPFVRKGGLAGAAINDGFLGDDRRTAENFARLTRPDFAYQPYVPRDEAAIKRPAWLNDPIWYHNRGNSRFTGESSTYGDFSGLDDLATENPRVVQGFIDIYGQWIDDFGIDGFRIDTARHVNPEFWQAFVPAMLARAKARGIPNFHIFGEVAETTPGMLARFTRVDGYPAVLDFAFQGAVTDAVNGKTGTDVLAQLFSQDALYEGGEAAALQLPTFLGNHDMGRIGHFVRAAHPDASDDEITRRVVLAHAFLMFTRGAPVLYYGDEQGLVGVGGDKDSRQDMFATKVAEYAAARLVDGAPAAGDHFKTDGTLYRSISTMTRLRAAEPALRGGRQVVRASGDKPGLFAISRMTDAGETLVAFNTGLTPIAVQVEVDATSRTWRSAHGSCAPAAMAPGSYRVEIGPLDYTICVSEVGQ

Samples

Sample ID Description Type Environment
1 2582581279 Caulobacter henricii OK261 Isolate Rhizosphere
2 2599185359 Sphingomonas sp. NFR04 Isolate Rhizoplane
3 2643221545 Caulobacter sp. Root1455 Isolate Unclassified
4 2643221563 Sphingopyxis sp. Root154 Isolate Unclassified
5 2643221574 Brevundimonas sp. Root608 Isolate Unclassified
6 2643221608 Sphingopyxis sp. Root214 Isolate Unclassified
7 2643221622 Sphingomonas sp. Root241 Isolate Unclassified
8 2643221663 Brevundimonas sp. Root1279 Isolate Unclassified
9 2643221691 Caulobacter sp. Root487D2Y Isolate Unclassified
10 2643221699 Brevundimonas sp. Root1423 Isolate Unclassified
11 2791355048 Caulobacter flavus CGMCC1 15093 Isolate Rhizosphere
12 2818991466 Sphingomonas trueperi 1152a Isolate Unclassified
13 2830075706 Sphingomonas jinjuensis DSM 21457 Isolate Rhizosphere
14 2843744320 Caulobacter flavus RHGG3 Isolate Unclassified
15 2849560528 Caulobacter zeae 410 Isolate Unclassified
16 2849573788 Caulobacter endophyticus 774 Isolate Unclassified
17 2851153111 Caulobacter radicis 736 Isolate Unclassified
18 2852653556 Sphingopyxis sp. JAI108 Isolate Rhizosphere
19 2852680915 Sphingopyxis sp. JAI128 Isolate Rhizosphere
20 2879163058 Sphingomonas pokkalii L3B27 Isolate Rhizosphere
21 2896253425 Aurantiacibacter rhizosphaerae GH3-10 Isolate Rhizosphere
22 2898329390 Caulobacter sp. 602-2 Isolate Rhizosphere
23 2919138771 Novosphingobium sp. 1748 Isolate Rhizosphere
24 2928526807 Sphingomonas trueperi 1770 Isolate Rhizosphere
25 2928968154 Sphingomonas trueperi 1075 Isolate Unclassified
26 2928972540 Brevundimonas sp. 1080 Isolate Rhizosphere
27 2977240413 Brevundimonas vesicularis SORGH_AS 431 Isolate Unclassified
28 2990265787 Sphingomonas sp. SORGH_AS802 Isolate Aerial Root
29 2993693658 Sphingomonas sp. SORGH_AS438 Isolate Aerial Root
30 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
31 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
32 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
33 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
34 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
35 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
36 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
37 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
38 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
39 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
40 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
41 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
42 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
43 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
44 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
45 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
46 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
47 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
48 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
49 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
50 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
51 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
52 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
53 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
54 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
55 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
56 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
57 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
58 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
59 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
60 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
61 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
62 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
63 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
64 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
65 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
66 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
67 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
68 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
69 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
70 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
71 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
72 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
73 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
74 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
75 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
76 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
77 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
78 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
79 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
80 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
81 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
82 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
83 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
85 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
86 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
88 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
89 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
112 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
113 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
114 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
115 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
116 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
117 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
118 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
119 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
120 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
121 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
122 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
123 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
124 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
125 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
126 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
127 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
128 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
129 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
130 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
131 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
132 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
133 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
134 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
135 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
136 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
137 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
138 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
139 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
140 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
141 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
142 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
143 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
144 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
145 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
146 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
147 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
148 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
149 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
150 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
151 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
152 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
153 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
154 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
155 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
156 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
157 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
158 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
159 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
160 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
161 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
162 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
166 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
167 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
168 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
169 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
170 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
171 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
172 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
173 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
174 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
175 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
176 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
177 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
178 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
179 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
180 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
181 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
182 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
183 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
184 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
185 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 88
Metatranscriptomes 0
Isolates 12

Biome Distribution

Category Percentage (%)
Aerial Root 0.8
Bulb 0
Endosphere 18.4
Nodule 0
Rhizoplane 2.4
Rhizosphere 59.2
Stem 0
Stem Tuber 0
Unclassified 19.2

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25153J46596_10008644 3300003215 Bacteria 4843
2 rootH2_10023246 3300003320 Bacteria 19919
3 rootL2_10062536 3300003322 Bacteria 3864
4 Ga0055537_1002111 3300003773 Bacteria 6983
5 Ga0055524_1000361 3300003775 Bacteria 40768
6 Ga0055536_1000122 3300003781 Bacteria 66977
7 Ga0055536_1009460 3300003781 Bacteria 4030
8 Ga0055534_1008546 3300003784 Bacteria 2307
9 Ga0055530_10000092 3300003791 Bacteria 77982
10 Ga0055531_10000876 3300003794 Bacteria 24686
11 Ga0065165_1001948 3300005262 Bacteria 19602
12 Ga0065165_1006790 3300005262 Bacteria 5848
13 Ga0070658_10000126 3300005327 Bacteria 67900
14 Ga0070690_100029564 3300005330 Bacteria 3399
15 Ga0070670_100077560 3300005331 Bacteria 2854
16 Ga0070682_100031846 3300005337 Bacteria 3193
17 Ga0070660_100002436 3300005339 Bacteria 12781
18 Ga0070692_10046695 3300005345 Bacteria 2239
19 Ga0070669_100035025 3300005353 Bacteria 3636
20 Ga0070673_100020112 3300005364 Bacteria 4808
21 Ga0070659_100003530 3300005366 Bacteria 11139
22 Ga0070667_100035759 3300005367 Bacteria 4162
23 Ga0070700_100017605 3300005441 Bacteria 4092
24 Ga0070694_100043536 3300005444 Bacteria 3002
25 Ga0070662_100037114 3300005457 Bacteria 3453
26 Ga0070672_100007083 3300005543 Bacteria 7585
27 Ga0070672_100131352 3300005543 Bacteria 2058
28 Ga0070686_100028603 3300005544 Bacteria 3382
29 Ga0070686_100055655 3300005544 Bacteria 2535
30 Ga0070696_100110394 3300005546 Bacteria 1980
31 Ga0070665_100094510 3300005548 Bacteria 2994
32 Ga0068859_100043345 3300005617 Bacteria 4522
33 Ga0068864_100034929 3300005618 Bacteria 4278
34 Ga0068861_100005179 3300005719 Bacteria 8795
35 Ga0068861_100010618 3300005719 Bacteria 6395
36 Ga0068851_10001888 3300005834 Bacteria 9201
37 Ga0068863_100075930 3300005841 Bacteria 3179
38 Ga0068862_100037875 3300005844 Bacteria 4089
39 Ga0081455_10002313 3300005937 Bacteria 22719
40 Ga0097621_100012728 3300006237 Bacteria 6250
41 Ga0097620_100043345 3300006931 Bacteria 4522
42 Ga0099795_10000002 3300007788 Bacteria 161112
43 Ga0105240_10001217 3300009093 Bacteria 44799
44 Ga0111539_10029766 3300009094 Bacteria 6645
45 Ga0105238_10011711 3300009551 Bacteria 8841
46 Ga0105249_10048753 3300009553 Bacteria 3862
47 Ga0099796_10000030 3300010159 Bacteria 32756
48 Ga0105239_10132802 3300010375 Bacteria 2770
49 Ga0157370_10018599 3300013104 Bacteria 6986
50 Ga0157369_10009645 3300013105 Bacteria 11042
51 Ga0157375_10011901 3300013308 Bacteria 7697
52 Ga0157375_10246683 3300013308 Bacteria 1946
53 Ga0157380_10004072 3300014326 Bacteria 10089
54 Ga0157376_10058914 3300014969 Bacteria 3219
55 Ga0213873_10000006 3300021358 Bacteria 408723
56 Ga0213876_10000004 3300021384 Bacteria 943822
57 Ga0213876_10000138 3300021384 Bacteria 79857
58 Ga0207425_1001683 3300025245 Bacteria 8813
59 Ga0209565_1000011 3300025263 Bacteria 637062
60 Ga0209675_1000366 3300025291 Bacteria 38418
61 Ga0209676_1000045 3300025292 Bacteria 412331
62 Ga0209676_1000133 3300025292 Bacteria 184430
63 Ga0209676_1000297 3300025292 Bacteria 100558
64 Ga0209676_1003595 3300025292 Bacteria 9344
65 Ga0209025_1011639 3300025294 Bacteria 5766
66 Ga0209758_1002209 3300025297 Bacteria 20282
67 Ga0209050_1000067 3300025298 Bacteria 304206
68 Ga0209050_1001014 3300025298 Bacteria 35068
69 Ga0209050_1010976 3300025298 Bacteria 4373
70 Ga0209256_1000016 3300025299 Bacteria 599092
71 Ga0209256_1001822 3300025299 Bacteria 19974
72 Ga0209257_1000132 3300025304 Bacteria 210870
73 Ga0209257_1000174 3300025304 Bacteria 165255
74 Ga0209257_1004785 3300025304 Bacteria 10089
75 Ga0207656_10020897 3300025321 Bacteria 2608
76 Ga0207682_10007149 3300025893 Bacteria 4466
77 Ga0207647_10000226 3300025904 Bacteria 46718
78 Ga0207643_10005064 3300025908 Bacteria 7055
79 Ga0207705_10000002 3300025909 Bacteria 2046852
80 Ga0207695_10001187 3300025913 Bacteria 44926
81 Ga0207671_10012141 3300025914 Bacteria 6952
82 Ga0207671_10026460 3300025914 Bacteria 4347
83 Ga0207657_10000506 3300025919 Bacteria 41185
84 Ga0207690_10004860 3300025932 Bacteria 7925
85 Ga0207706_10054497 3300025933 Bacteria 3529
86 Ga0207686_10048134 3300025934 Bacteria 2640
87 Ga0207669_10040405 3300025937 Bacteria 2706
88 Ga0207691_10004334 3300025940 Bacteria 13778
89 Ga0207691_10022201 3300025940 Bacteria 5987
90 Ga0207691_10030351 3300025940 Bacteria 5052
91 Ga0207712_10005804 3300025961 Bacteria 7779
92 Ga0207668_10026118 3300025972 Bacteria 3788
93 Ga0207639_10016853 3300026041 Bacteria 5177
94 Ga0207678_10044904 3300026067 Bacteria 3821
95 Ga0207678_10101266 3300026067 Bacteria 2460
96 Ga0207675_100018970 3300026118 Bacteria 6421
97 Ga0207675_100018987 3300026118 Bacteria 6418
98 Ga0207683_10039207 3300026121 Bacteria 4132
99 Ga0209179_1000003 3300027512 Bacteria 121837
100 Ga0268265_10042534 3300028380 Bacteria 3372
101 Ga0268265_10054829 3300028380 Bacteria 3027
102 Ga0268265_10075759 3300028380 Bacteria 2637
103 Ga0268264_10093954 3300028381 Bacteria 2592
104 Ga0307515_10026806 3300028794 Bacteria 9889
105 Ga0307515_10030631 3300028794 Bacteria 9018
106 Ga0307515_10057979 3300028794 Bacteria 5590
107 Ga0316177_1113625 3300030731 Bacteria 3167
108 Ga0314311_1244993 3300030733 Bacteria 4919
109 Ga0307509_10046364 3300031507 Bacteria 4680
110 Ga0307408_100030235 3300031548 Bacteria 3760
111 Ga0307405_10000388 3300031731 Bacteria 16457
112 Ga0307413_10005080 3300031824 Bacteria 5821
113 Ga0307410_10011582 3300031852 Bacteria 5050
114 Ga0307406_10008516 3300031901 Bacteria 5726
115 Ga0307407_10000789 3300031903 Bacteria 10469
116 Ga0307407_10004946 3300031903 Bacteria 5730
117 Ga0307409_100002021 3300031995 Bacteria 10412
118 Ga0307409_100003285 3300031995 Bacteria 8738
119 Ga0307414_10013513 3300032004 Bacteria 4863
120 Ga0307414_10069876 3300032004 Bacteria 2526
121 Ga0307414_10075071 3300032004 Bacteria 2452
122 Ga0307411_10008970 3300032005 Bacteria 5222
123 Ga0307411_10025169 3300032005 Bacteria 3561
124 Ga0373933_0069429 3300035724 Bacteria 2142
125 Ga0395899_0000003 3300037312 Bacteria 1232684
126 Ga0436365_0798724 3300039437 Bacteria 89017
127 Ga0436365_0862833 3300039437 Bacteria 88455
128 Ga0436360_0700896 3300039438 Bacteria 7369
129 Ga0436361_0579226 3300039447 Bacteria 15069
130 Ga0436362_0949954 3300039453 Bacteria 89092
131 Ga0451807_0061797 3300041486 Bacteria 2788
132 Ga0451807_1170453 3300041486 Bacteria 4522
133 Ga0451853_3126239 3300041512 Bacteria 2828
134 Ga0439432_013909 3300042006 Bacteria 2728
135 Ga0495638_0000055 3300046460 Bacteria 196038
136 Ga0495638_0000364 3300046460 Bacteria 56015
137 Ga0495638_0001222 3300046460 Bacteria 24372
138 Ga0495638_0023376 3300046460 Bacteria 4042
139 Ga0495638_0036831 3300046460 Bacteria 3114
140 Ga0495650_0000017 3300046471 Bacteria 542552
141 Ga0495606_0004803 3300046507 Bacteria 13281
142 Ga0495610_0000343 3300046512 Bacteria 49113
143 Ga0495610_0010682 3300046512 Bacteria 5683
144 Ga0495616_0013738 3300046513 Bacteria 4558
145 Ga0495632_0032748 3300046519 Bacteria 2675
146 Ga0495637_0005235 3300046520 Bacteria 6640
147 Ga0495648_0001871 3300046524 Bacteria 20126
148 Ga0495648_0016925 3300046524 Bacteria 5239
149 Ga0495654_0000126 3300046530 Bacteria 85179
150 Ga0495633_0000384 3300046558 Bacteria 46696
151 Ga0495668_0000015 3300046616 Bacteria 441932
152 Ga0495668_0000060 3300046616 Bacteria 193823
153 Ga0495668_0029865 3300046616 Bacteria 3080
154 Ga0495625_0000025 3300046660 Bacteria 267383
155 Ga0495625_0000841 3300046660 Bacteria 42026
156 Ga0495625_0003153 3300046660 Bacteria 16792
157 Ga0495625_0004010 3300046660 Bacteria 14094
158 Ga0495625_0027552 3300046660 Bacteria 4276
159 Ga0495625_0035116 3300046660 Bacteria 3697
160 Ga0495649_0002313 3300046694 Bacteria 13517
161 Ga0495649_0008988 3300046694 Bacteria 5969
162 Ga0495672_0000647 3300047320 Bacteria 38716
163 Ga0495673_0000420 3300047469 Bacteria 48299
164 Ga0495686_0000376 3300047472 Bacteria 71769
165 Ga0495686_0061954 3300047472 Bacteria 2321
166 Ga0496101_0028487 3300048904 Bacteria 3899
167 Ga0496107_0007550 3300048910 Bacteria 7501
168 Ga0496107_0038410 3300048910 Bacteria 3434
169 Ga0496116_0067192 3300048919 Bacteria 2291
170 Ga0496117_0026419 3300048920 Bacteria 4543
171 Ga0496117_0034466 3300048920 Bacteria 3813
172 Ga0496118_0000417 3300048921 Bacteria 70807
173 Ga0496118_0027226 3300048921 Bacteria 4844
174 Ga0496119_0023470 3300048922 Bacteria 4371
175 Ga0496120_0051064 3300048923 Bacteria 2364
176 Ga0496121_0000063 3300048924 Bacteria 273080
177 Ga0496121_0000413 3300048924 Bacteria 84919
178 Ga0496121_0001387 3300048924 Bacteria 41011
179 Ga0496122_0008467 3300048925 Bacteria 11088
180 Ga0496123_0001905 3300048926 Bacteria 27213
181 Ga0496123_0017435 3300048926 Bacteria 5776
182 Ga0496123_0026392 3300048926 Bacteria 4351
183 Ga0496124_0000054 3300048927 Bacteria 252172
184 Ga0496124_0000631 3300048927 Bacteria 58432
185 Ga0496124_0008281 3300048927 Bacteria 10893
186 Ga0496124_0029501 3300048927 Bacteria 4886
187 Ga0496125_0002858 3300048928 Bacteria 21733
188 Ga0496126_0000134 3300048929 Bacteria 169693
189 Ga0496126_0100094 3300048929 Bacteria 2537
190 Ga0501033_0001724 3300049570 Bacteria 19138
191 Ga0501033_0039986 3300049570 Bacteria 3502
192 Ga0501034_0003928 3300049571 Bacteria 16701
193 Ga0501034_0163237 3300049571 Bacteria 2198
194 Ga0501042_0021583 3300049578 Bacteria 4491
195 Ga0501068_0006161 3300049584 Bacteria 6599
196 Ga0501070_0014311 3300049586 Bacteria 6677
197 Ga0501074_0000792 3300049590 Bacteria 20005
198 Ga0501075_0050099 3300049591 Bacteria 3139
199 Ga0501077_0009010 3300049593 Bacteria 6195
200 Ga0501080_0001774 3300049742 Bacteria 18484
201 nmdc:mga08y16_63353_c1 3300050511 Bacteria 3861
202 Ga0500578_0000056 3300053086 Bacteria 120189
203 Ga0500644_0000046 3300053088 Bacteria 73850
204 Ga0500644_0001213 3300053088 Bacteria 7232
205 Ga0500651_0007567 3300053093 Bacteria 6348
206 Ga0500651_0036616 3300053093 Bacteria 3092
207 Ga0500566_0000258 3300053094 Bacteria 28578
208 Ga0500556_0000357 3300053104 Bacteria 33957
209 Ga0500594_0000012 3300053118 Bacteria 81832
210 Ga0500595_000624 3300053119 Bacteria 21192
211 Ga0500618_003728 3300053125 Bacteria 5113
212 Ga0500658_0001035 3300053134 Bacteria 11362
213 Ga0500658_0001299 3300053134 Bacteria 10114
214 Ga0500559_0001330 3300053136 Bacteria 14235
215 Ga0500564_000053 3300053138 Bacteria 30143
216 Ga0500622_0001117 3300053156 Bacteria 22390
217 Ga0500622_0004172 3300053156 Bacteria 9239
218 Ga0500627_0012764 3300053158 Bacteria 3160
219 Ga0500645_000466 3300053730 Bacteria 27634
220 Ga0500645_006273 3300053730 Bacteria 4265

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048925 Ga0496122_0008467 Ga0496122_0008467_2233_4008 532
2 3300048926 Ga0496123_0001905 Ga0496123_0001905_19470_21245 532
3 3300013105 Ga0157369_10009645 Ga0157369_100096452 533
4 3300013104 Ga0157370_10018599 Ga0157370_100185993 535
5 3300003322 rootL2_10062536 rootL2_100625362 543
6 3300046558 Ga0495633_0000384 Ga0495633_0000384_40593_42524 556
7 3300046507 Ga0495606_0004803 Ga0495606_0004803_1568_3385 559
8 3300031903 Ga0307407_10004946 Ga0307407_100049464 560
9 3300031995 Ga0307409_100003285 Ga0307409_1000032854 560
10 3300032005 Ga0307411_10025169 Ga0307411_100251691 560
11 3300048928 Ga0496125_0002858 Ga0496125_0002858_988_2775 561
12 3300049571 Ga0501034_0163237 Ga0501034_0163237_45_1901 562
13 3300039438 Ga0436360_0700896 Ga0436360_0700896_1293_3479 571
14 3300028794 Ga0307515_10030631 Ga0307515_100306311 573
15 3300048922 Ga0496119_0023470 Ga0496119_0023470_2546_4279 573
16 3300032004 Ga0307414_10013513 Ga0307414_100135133 574
17 3300010375 Ga0105239_10132802 Ga0105239_101328022 579
18 3300048921 Ga0496118_0027226 Ga0496118_0027226_2764_4566 579
19 3300048927 Ga0496124_0029501 Ga0496124_0029501_1318_3129 579
20 3300007788 Ga0099795_10000002 Ga0099795_10000002141 580
21 3300010159 Ga0099796_10000030 Ga0099796_1000003021 580
22 3300027512 Ga0209179_1000003 Ga0209179_100000397 580
23 3300028794 Ga0307515_10026806 Ga0307515_100268062 580
24 3300028794 Ga0307515_10057979 Ga0307515_100579792 580
25 3300046460 Ga0495638_0023376 Ga0495638_0023376_2018_3808 581
26 3300046512 Ga0495610_0010682 Ga0495610_0010682_2076_3866 581
27 3300046694 Ga0495649_0002313 Ga0495649_0002313_7087_8874 581
28 3300047472 Ga0495686_0000376 Ga0495686_0000376_33756_35546 581
29 3300048924 Ga0496121_0000413 Ga0496121_0000413_60906_62798 581
30 3300053086 Ga0500578_0000056 Ga0500578_0000056_4015_5805 581
31 3300053118 Ga0500594_0000012 Ga0500594_0000012_56367_58178 581
32 3300053156 Ga0500622_0001117 Ga0500622_0001117_19002_20792 581
33 3300053156 Ga0500622_0004172 Ga0500622_0004172_1422_3194 581
34 3300021384 Ga0213876_10000138 Ga0213876_1000013813 582
35 3300039437 Ga0436365_0798724 Ga0436365_0798724_16665_18476 582
36 3300053088 Ga0500644_0001213 Ga0500644_0001213_2014_3819 582
37 3300053093 Ga0500651_0007567 Ga0500651_0007567_2551_4356 582
38 iso_pu_bacteria 2643221574 2643882649 582
39 iso_pu_bacteria 2643221699 2644548247 582
40 3300053093 Ga0500651_0036616 Ga0500651_0036616_843_2642 583
41 iso_pu_bacteria 2643221699 2644548449 583
42 iso_pu_bacteria 2643221563 2643836412 584
43 iso_pu_bacteria 2643221608 2644052888 584
44 iso_pu_bacteria 2643221663 2644352595 584
45 iso_pu_bacteria 2852680915 2852683393 584
46 3300005330 Ga0070690_100029564 Ga0070690_1000295643 585
47 3300005367 Ga0070667_100035759 Ga0070667_1000357591 585
48 3300005444 Ga0070694_100043536 Ga0070694_1000435363 585
49 3300005544 Ga0070686_100028603 Ga0070686_1000286032 585
50 3300005546 Ga0070696_100110394 Ga0070696_1001103941 585
51 3300005617 Ga0068859_100043345 Ga0068859_1000433454 585
52 3300005618 Ga0068864_100034929 Ga0068864_1000349292 585
53 3300005719 Ga0068861_100005179 Ga0068861_1000051793 585
54 3300005834 Ga0068851_10001888 Ga0068851_1000188810 585
55 3300006931 Ga0097620_100043345 Ga0097620_1000433454 585
56 3300025321 Ga0207656_10020897 Ga0207656_100208972 585
57 3300025914 Ga0207671_10026460 Ga0207671_100264603 585
58 3300026067 Ga0207678_10044904 Ga0207678_100449043 585
59 3300026118 Ga0207675_100018970 Ga0207675_1000189703 585
60 3300028380 Ga0268265_10042534 Ga0268265_100425344 585
61 iso_pu_bacteria 2928972540 2928973748 585
62 iso_pu_bacteria 2977240413 2977241290 585
63 3300025292 Ga0209676_1003595 Ga0209676_10035954 586
64 3300025904 Ga0207647_10000226 Ga0207647_1000022639 586
65 3300046616 Ga0495668_0000060 Ga0495668_0000060_145993_147804 586
66 3300048919 Ga0496116_0067192 Ga0496116_0067192_153_1982 586
67 iso_pu_bacteria 2919138771 2919142895 586
68 3300003781 Ga0055536_1000122 Ga0055536_100012249 587
69 3300003781 Ga0055536_1009460 Ga0055536_10094602 587
70 3300003784 Ga0055534_1008546 Ga0055534_10085462 587
71 3300003791 Ga0055530_10000092 Ga0055530_1000009220 587
72 3300025291 Ga0209675_1000366 Ga0209675_100036616 587
73 3300025292 Ga0209676_1000045 Ga0209676_1000045119 587
74 3300025292 Ga0209676_1000133 Ga0209676_1000133176 587
75 3300025292 Ga0209676_1000297 Ga0209676_100029784 587
76 3300025294 Ga0209025_1011639 Ga0209025_10116393 587
77 3300025298 Ga0209050_1000067 Ga0209050_1000067170 587
78 3300025298 Ga0209050_1010976 Ga0209050_10109763 587
79 3300025304 Ga0209257_1000132 Ga0209257_100013211 587
80 3300025304 Ga0209257_1000174 Ga0209257_100017411 587
81 3300032004 Ga0307414_10069876 Ga0307414_100698762 587
82 3300046660 Ga0495625_0000841 Ga0495625_0000841_23685_25478 587
83 3300048904 Ga0496101_0028487 Ga0496101_0028487_1230_3086 587
84 3300048910 Ga0496107_0038410 Ga0496107_0038410_765_2630 587
85 3300048920 Ga0496117_0026419 Ga0496117_0026419_696_2552 587
86 3300048921 Ga0496118_0000417 Ga0496118_0000417_51847_53703 587
87 3300048924 Ga0496121_0000063 Ga0496121_0000063_58616_60481 587
88 3300048929 Ga0496126_0000134 Ga0496126_0000134_69480_71336 587
89 3300053134 Ga0500658_0001299 Ga0500658_0001299_7462_9279 587
90 iso_pu_bacteria 2830075706 2830078909 587
91 iso_pu_bacteria 2852653556 2852657266 587
92 3300003320 rootH2_10023246 rootH2_100232463 588
93 3300042006 Ga0439432_013909 Ga0439432_013909_540_2306 588
94 3300046524 Ga0495648_0001871 Ga0495648_0001871_8317_10128 588
95 3300047469 Ga0495673_0000420 Ga0495673_0000420_45869_47680 588
96 3300053088 Ga0500644_0000046 Ga0500644_0000046_38375_40186 588
97 3300053138 Ga0500564_000053 Ga0500564_000053_20092_21903 588
98 iso_pu_bacteria 2582581279 2585147062 588
99 3300030731 Ga0316177_1113625 Ga0316177_11136253 589
100 3300030733 Ga0314311_1244993 Ga0314311_12449933 589
101 3300031731 Ga0307405_10000388 Ga0307405_1000038812 589
102 3300049578 Ga0501042_0021583 Ga0501042_0021583_1348_3132 589
103 3300005457 Ga0070662_100037114 Ga0070662_1000371142 590
104 3300005719 Ga0068861_100010618 Ga0068861_1000106182 590
105 3300009553 Ga0105249_10048753 Ga0105249_100487533 590
106 3300025933 Ga0207706_10054497 Ga0207706_100544972 590
107 3300025961 Ga0207712_10005804 Ga0207712_100058043 590
108 3300026118 Ga0207675_100018987 Ga0207675_1000189873 590
109 3300032004 Ga0307414_10075071 Ga0307414_100750712 590
110 3300046616 Ga0495668_0000015 Ga0495668_0000015_387431_389236 590
111 3300048910 Ga0496107_0007550 Ga0496107_0007550_331_2136 590
112 3300048924 Ga0496121_0001387 Ga0496121_0001387_37516_39321 590
113 3300049570 Ga0501033_0001724 Ga0501033_0001724_16239_18041 590
114 3300049571 Ga0501034_0003928 Ga0501034_0003928_5527_7329 590
115 3300053125 Ga0500618_003728 Ga0500618_003728_280_2091 590
116 3300005331 Ga0070670_100077560 Ga0070670_1000775601 591
117 3300005353 Ga0070669_100035025 Ga0070669_1000350252 591
118 3300005441 Ga0070700_100017605 Ga0070700_1000176053 591
119 3300005543 Ga0070672_100007083 Ga0070672_1000070835 591
120 3300005544 Ga0070686_100055655 Ga0070686_1000556551 591
121 3300005548 Ga0070665_100094510 Ga0070665_1000945102 591
122 3300005844 Ga0068862_100037875 Ga0068862_1000378752 591
123 3300009093 Ga0105240_10001217 Ga0105240_100012175 591
124 3300009551 Ga0105238_10011711 Ga0105238_100117116 591
125 3300013308 Ga0157375_10011901 Ga0157375_100119012 591
126 3300014326 Ga0157380_10004072 Ga0157380_100040725 591
127 3300014969 Ga0157376_10058914 Ga0157376_100589142 591
128 3300021358 Ga0213873_10000006 Ga0213873_10000006147 591
129 3300021384 Ga0213876_10000004 Ga0213876_10000004653 591
130 3300025913 Ga0207695_10001187 Ga0207695_1000118738 591
131 3300025940 Ga0207691_10004334 Ga0207691_100043345 591
132 3300028380 Ga0268265_10075759 Ga0268265_100757591 591
133 3300031548 Ga0307408_100030235 Ga0307408_1000302352 591
134 3300031824 Ga0307413_10005080 Ga0307413_100050803 591
135 3300031852 Ga0307410_10011582 Ga0307410_100115823 591
136 3300031901 Ga0307406_10008516 Ga0307406_100085163 591
137 3300031903 Ga0307407_10000789 Ga0307407_100007895 591
138 3300031995 Ga0307409_100002021 Ga0307409_1000020212 591
139 3300032005 Ga0307411_10008970 Ga0307411_100089702 591
140 3300039437 Ga0436365_0862833 Ga0436365_0862833_48219_50051 591
141 3300039453 Ga0436362_0949954 Ga0436362_0949954_53813_55645 591
142 3300046471 Ga0495650_0000017 Ga0495650_0000017_53237_55195 591
143 3300046524 Ga0495648_0016925 Ga0495648_0016925_1062_2873 591
144 3300046530 Ga0495654_0000126 Ga0495654_0000126_30164_31975 591
145 3300049584 Ga0501068_0006161 Ga0501068_0006161_3699_5492 591
146 3300049586 Ga0501070_0014311 Ga0501070_0014311_3825_5618 591
147 3300049590 Ga0501074_0000792 Ga0501074_0000792_10877_12670 591
148 3300049591 Ga0501075_0050099 Ga0501075_0050099_592_2385 591
149 3300049593 Ga0501077_0009010 Ga0501077_0009010_2741_4534 591
150 3300049742 Ga0501080_0001774 Ga0501080_0001774_692_2485 591
151 3300053158 Ga0500627_0012764 Ga0500627_0012764_47_2005 591
152 iso_pu_bacteria 2643221622 2644125183 591
153 3300009094 Ga0111539_10029766 Ga0111539_100297663 592
154 3300028380 Ga0268265_10054829 Ga0268265_100548292 592
155 3300028381 Ga0268264_10093954 Ga0268264_100939542 592
156 3300031507 Ga0307509_10046364 Ga0307509_100463642 592
157 3300035724 Ga0373933_0069429 Ga0373933_0069429_284_2080 592
158 3300041486 Ga0451807_0061797 Ga0451807_0061797_487_2295 592
159 3300041486 Ga0451807_1170453 Ga0451807_1170453_393_2189 592
160 3300041512 Ga0451853_3126239 Ga0451853_3126239_794_2602 592
161 3300050511 nmdc:mga08y16_63353_c1 nmdc:mga08y16_63353_c1_878_2674 592
162 iso_pu_bacteria 2643221545 2643747728 592
163 iso_pu_bacteria 2643221691 2644510454 592
164 iso_pu_bacteria 2990265787 2990268746 592
165 iso_pu_bacteria 2993693658 2993694547 592
166 3300005337 Ga0070682_100031846 Ga0070682_1000318461 593
167 3300005364 Ga0070673_100020112 Ga0070673_1000201123 593
168 3300005543 Ga0070672_100131352 Ga0070672_1001313522 593
169 3300005841 Ga0068863_100075930 Ga0068863_1000759302 593
170 3300005937 Ga0081455_10002313 Ga0081455_1000231318 593
171 3300006237 Ga0097621_100012728 Ga0097621_1000127283 593
172 3300013308 Ga0157375_10246683 Ga0157375_102466832 593
173 3300025893 Ga0207682_10007149 Ga0207682_100071492 593
174 3300025908 Ga0207643_10005064 Ga0207643_100050644 593
175 3300025934 Ga0207686_10048134 Ga0207686_100481342 593
176 3300025937 Ga0207669_10040405 Ga0207669_100404051 593
177 3300025940 Ga0207691_10022201 Ga0207691_100222015 593
178 3300025972 Ga0207668_10026118 Ga0207668_100261182 593
179 3300026067 Ga0207678_10101266 Ga0207678_101012662 593
180 3300026121 Ga0207683_10039207 Ga0207683_100392074 593
181 3300046460 Ga0495638_0001222 Ga0495638_0001222_10286_12085 593
182 3300046460 Ga0495638_0036831 Ga0495638_0036831_1181_2977 593
183 3300046513 Ga0495616_0013738 Ga0495616_0013738_576_2372 593
184 3300046519 Ga0495632_0032748 Ga0495632_0032748_562_2358 593
185 3300046660 Ga0495625_0027552 Ga0495625_0027552_1145_2944 593
186 3300046660 Ga0495625_0035116 Ga0495625_0035116_103_1899 593
187 3300046694 Ga0495649_0008988 Ga0495649_0008988_3067_4866 593
188 iso_pu_bacteria 2599185359 2600225141 593
189 iso_pu_bacteria 2791355048 2792461715 593
190 iso_pu_bacteria 2818991466 2819713422 593
191 iso_pu_bacteria 2843744320 2843745922 593
192 iso_pu_bacteria 2849560528 2849561718 593
193 iso_pu_bacteria 2849573788 2849577783 593
194 iso_pu_bacteria 2851153111 2851156702 593
195 iso_pu_bacteria 2879163058 2879165566 593
196 iso_pu_bacteria 2896253425 2896253609 593
197 iso_pu_bacteria 2898329390 2898330716 593
198 iso_pu_bacteria 2928526807 2928530333 593
199 iso_pu_bacteria 2928968154 2928971834 593
200 3300005327 Ga0070658_10000126 Ga0070658_1000012634 594
201 3300005339 Ga0070660_100002436 Ga0070660_1000024362 594
202 3300005345 Ga0070692_10046695 Ga0070692_100466952 594
203 3300005366 Ga0070659_100003530 Ga0070659_1000035304 594
204 3300025299 Ga0209256_1001822 Ga0209256_100182213 594
205 3300025909 Ga0207705_10000002 Ga0207705_10000002928 594
206 3300025919 Ga0207657_10000506 Ga0207657_1000050634 594
207 3300025932 Ga0207690_10004860 Ga0207690_100048602 594
208 3300025940 Ga0207691_10030351 Ga0207691_100303513 594
209 3300046460 Ga0495638_0000364 Ga0495638_0000364_713_2536 594
210 3300046512 Ga0495610_0000343 Ga0495610_0000343_23630_25453 594
211 3300046520 Ga0495637_0005235 Ga0495637_0005235_4720_6543 594
212 3300046616 Ga0495668_0029865 Ga0495668_0029865_957_2765 594
213 3300046660 Ga0495625_0003153 Ga0495625_0003153_6432_8255 594
214 3300047472 Ga0495686_0061954 Ga0495686_0061954_67_1866 594
215 3300053094 Ga0500566_0000258 Ga0500566_0000258_15190_16974 594
216 3300053104 Ga0500556_0000357 Ga0500556_0000357_21213_23036 594
217 3300053730 Ga0500645_000466 Ga0500645_000466_1622_3445 594
218 3300037312 Ga0395899_0000003 Ga0395899_0000003_469560_471407 595
219 3300046660 Ga0495625_0000025 Ga0495625_0000025_152016_153866 595
220 3300047320 Ga0495672_0000647 Ga0495672_0000647_9533_11362 595
221 3300048920 Ga0496117_0034466 Ga0496117_0034466_98_1897 595
222 3300049570 Ga0501033_0039986 Ga0501033_0039986_1376_3175 595
223 3300053134 Ga0500658_0001035 Ga0500658_0001035_3157_4944 595
224 3300053730 Ga0500645_006273 Ga0500645_006273_1879_3708 595
225 3300026041 Ga0207639_10016853 Ga0207639_100168533 596
226 3300046460 Ga0495638_0000055 Ga0495638_0000055_125496_127367 596
227 3300046660 Ga0495625_0004010 Ga0495625_0004010_748_2634 596
228 3300053119 Ga0500595_000624 Ga0500595_000624_13391_15181 596
229 3300053136 Ga0500559_0001330 Ga0500559_0001330_11136_12992 596
230 3300003773 Ga0055537_1002111 Ga0055537_10021116 597
231 3300005262 Ga0065165_1001948 Ga0065165_10019485 597
232 3300025914 Ga0207671_10012141 Ga0207671_100121415 597
233 3300048923 Ga0496120_0051064 Ga0496120_0051064_456_2249 597
234 3300048926 Ga0496123_0017435 Ga0496123_0017435_2444_4237 597
235 3300048926 Ga0496123_0026392 Ga0496123_0026392_799_2592 597
236 3300048927 Ga0496124_0000054 Ga0496124_0000054_154502_156295 597
237 3300048927 Ga0496124_0000631 Ga0496124_0000631_14121_15914 597
238 3300048927 Ga0496124_0008281 Ga0496124_0008281_8938_10731 597
239 3300048929 Ga0496126_0100094 Ga0496126_0100094_309_2102 597
240 3300003215 JGI25153J46596_10008644 JGI25153J46596_100086441 598
241 3300003775 Ga0055524_1000361 Ga0055524_100036129 598
242 3300003794 Ga0055531_10000876 Ga0055531_1000087624 598
243 3300005262 Ga0065165_1006790 Ga0065165_10067902 598
244 3300025245 Ga0207425_1001683 Ga0207425_10016836 598
245 3300025263 Ga0209565_1000011 Ga0209565_100001135 598
246 3300025297 Ga0209758_1002209 Ga0209758_10022096 598
247 3300025298 Ga0209050_1001014 Ga0209050_100101428 598
248 3300025299 Ga0209256_1000016 Ga0209256_1000016564 598
249 3300025304 Ga0209257_1004785 Ga0209257_10047852 598
250 3300039447 Ga0436361_0579226 Ga0436361_0579226_7605_9458 598

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00128

Alpha-amylase

Alpha amylase, catalytic domain

129

513

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
5a2c-assembly1.cif.gz_A crystal structure of anoxybacillus alpha-amylase provides insights into a new glycosyl hydrolase subclass 0.8906 27 598
4e2o-assembly1.cif.gz_A crystal structure of alpha-amylase from geobacillus thermoleovorans, gta, complexed with acarbose 0.8875 27 598
5a2c-assembly1.cif.gz_A crystal structure of anoxybacillus alpha-amylase provides insights into a new glycosyl hydrolase subclass 0.8868 27 598
4e2o-assembly1.cif.gz_A crystal structure of alpha-amylase from geobacillus thermoleovorans, gta, complexed with acarbose 0.884 27 598
6sau-assembly1.cif.gz_A structural and functional characterisation of three novel fungal amylases with enhanced stability and ph tolerance. 0.8811 23 594
ID Description Score Start End Superfamily
4e2oA01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.8946 27 507 3.20.20.80
af_O45298_126_284_3.30.750.90 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA; 0.8911 32 153 3.30.750.90
4e2oA01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.8898 27 507 3.20.20.80
1g1yA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.8619 29 511 3.20.20.80
af_Q9Y7S9_23_399_3.20.20.80 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.8586 29 505 3.20.20.80
ID Description Score Start End GO Terms
AF-A0A6B2WTC4-F1-model_v4 deleted 0.9917 393 511
AF-A0A142VX21-F1-model_v4 Alpha-amylase 0.9911 33 596 GO:0004556
GO:0005509
GO:0005975
AF-A0A6L4A6D3-F1-model_v4 deleted 0.991 163 596
AF-A0A258RM98-F1-model_v4 Alpha-amylase 0.9877 82 598 GO:0005975
AF-A0A7K2MWS8-F1-model_v4 Glycosyl hydrolase family 13 catalytic domain-containing protein 0.9831 32 163 GO:0005975

Feature Viewer

pLDDT pTM Quality
93.75 0.92 High
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Predicted Structure (AlphaFold2)

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