F361761

General Info

Members Datasets Scaffolds Average Seq Length
250 193 249 146

Family's Representative Sequence

Representative Sequence 3300041509|Ga0451843_1102077|Ga0451843_1102077_28_456
Length 142
Sequence MLTVALAEARAGFAEGGIPIGAALFGADGSLLGRGHNRRVQDDDPSMHAETAAFKAAGRQRSYRGTTMVTTLSPCWYCSGLVRQFGISQVLIGEARTFHGGHDWLADLGVSVILLDDDDCFALLQEFITTRPQLWAEDIGEE

Samples

Sample ID Description Type Environment
1 2687453341 Pirellula sp. SH-Sr6A Isolate Unclassified
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
19 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
20 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
21 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
24 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
25 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
26 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
27 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
28 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
29 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
30 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
31 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
32 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
33 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
36 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
37 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
38 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
39 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
40 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
41 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
42 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
43 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
44 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
45 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
46 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
47 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
48 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
49 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
50 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
51 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
52 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
53 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
54 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
55 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
57 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
59 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
60 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
61 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
62 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
63 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
64 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
65 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
66 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
67 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
68 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
103 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
107 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
108 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
109 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
110 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
111 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
112 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
113 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
114 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
115 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
116 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
117 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
118 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
119 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
120 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
121 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
122 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
123 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
124 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
125 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
126 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
127 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
128 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
129 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
130 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
131 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
132 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
133 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
134 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
135 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
136 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
137 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
138 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
139 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
140 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
141 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
142 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
143 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
144 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
145 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
146 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
147 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
148 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
149 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
150 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
151 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
152 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
153 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
154 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
155 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
156 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
157 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
158 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
159 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
160 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
162 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
163 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
165 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
167 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
168 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
169 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
170 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
171 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
172 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
173 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
174 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
175 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
176 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
177 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
178 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
179 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
180 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
181 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
182 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
183 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
184 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
185 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
186 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
187 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
188 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
189 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
190 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
191 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
192 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
193 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.2
Metatranscriptomes 0.4
Isolates 0.4

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.2
Nodule 0
Rhizoplane 0.4
Rhizosphere 95.2
Stem 0
Stem Tuber 0
Unclassified 1.2

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10002300 3300003203 Bacteria 9015
2 JGI25406J46586_10072215 3300003203 Unclassified 1079
3 Ga0065704_10389716 3300005289 Bacteria 764
4 Ga0065712_10196663 3300005290 Bacteria 1125
5 Ga0065715_10521885 3300005293 Bacteria 760
6 Ga0065707_10095864 3300005295 Bacteria 3329
7 Ga0065707_10107449 3300005295 Bacteria 2553
8 Ga0070683_100026985 3300005329 Bacteria 5177
9 Ga0070690_100170883 3300005330 Bacteria 1496
10 Ga0068868_100041371 3300005338 Bacteria 3590
11 Ga0070660_100088060 3300005339 Bacteria 2445
12 Ga0070689_100171433 3300005340 Bacteria 1758
13 Ga0070661_100010271 3300005344 Bacteria 6506
14 Ga0070669_100018442 3300005353 Bacteria 4987
15 Ga0070675_100006384 3300005354 Bacteria 9049
16 Ga0070673_100089675 3300005364 Bacteria 2510
17 Ga0070659_100037109 3300005366 Bacteria 3799
18 Ga0070667_100087523 3300005367 Bacteria 2673
19 Ga0070701_10053020 3300005438 Bacteria 2109
20 Ga0070705_100326533 3300005440 Bacteria 1110
21 Ga0070694_100150561 3300005444 Bacteria 1699
22 Ga0070663_100077719 3300005455 Unclassified 2431
23 Ga0070662_100066506 3300005457 Bacteria 2644
24 Ga0068867_100084864 3300005459 Bacteria 2393
25 Ga0070685_10381911 3300005466 Bacteria 971
26 Ga0070698_100198485 3300005471 Bacteria 1942
27 Ga0070699_100726624 3300005518 Bacteria 908
28 Ga0070684_100171525 3300005535 Bacteria 1970
29 Ga0068853_100183668 3300005539 Bacteria 1897
30 Ga0070672_100014856 3300005543 Bacteria 5528
31 Ga0070686_100191545 3300005544 Unclassified 1460
32 Ga0070695_101075685 3300005545 Bacteria 657
33 Ga0070696_100377738 3300005546 Bacteria 1104
34 Ga0070665_100448213 3300005548 Unclassified 1300
35 Ga0068855_100022506 3300005563 Bacteria 7553
36 Ga0070664_100036707 3300005564 Bacteria 4117
37 Ga0068857_100015676 3300005577 Bacteria 6626
38 Ga0068857_100208054 3300005577 Unclassified 1785
39 Ga0068857_101054263 3300005577 Bacteria 784
40 Ga0068852_100122617 3300005616 Bacteria 2382
41 Ga0068861_100017298 3300005719 Bacteria 5115
42 Ga0068861_100475287 3300005719 Bacteria 1125
43 Ga0068863_100448487 3300005841 Bacteria 1266
44 Ga0068858_100408241 3300005842 Bacteria 1305
45 Ga0068860_100002064 3300005843 Bacteria 21156
46 Ga0068860_100087421 3300005843 Bacteria 2967
47 Ga0068862_100032887 3300005844 Bacteria 4380
48 Ga0068862_100586734 3300005844 Bacteria 1068
49 Ga0081538_10280061 3300005981 Bacteria 620
50 Ga0081539_10000117 3300005985 Bacteria 185868
51 Ga0081539_10000175 3300005985 Bacteria 150479
52 Ga0081539_10004285 3300005985 Bacteria 16000
53 Ga0081539_10009373 3300005985 Bacteria 8200
54 Ga0081539_10223308 3300005985 Bacteria 855
55 Ga0075363_100068413 3300006048 Bacteria 1926
56 Ga0075363_100848694 3300006048 Bacteria 557
57 Ga0075367_10151157 3300006178 Bacteria 1441
58 Ga0075428_100010744 3300006844 Bacteria 10177
59 Ga0075428_100082437 3300006844 Bacteria 3509
60 Ga0075428_100402534 3300006844 Bacteria 1467
61 Ga0075430_100000875 3300006846 Bacteria 23638
62 Ga0075430_100010003 3300006846 Bacteria 8026
63 Ga0075430_100025832 3300006846 Bacteria 4997
64 Ga0075431_100000393 3300006847 Bacteria 35138
65 Ga0075433_10152786 3300006852 Bacteria 2053
66 Ga0075434_100014815 3300006871 Bacteria 7460
67 Ga0075434_100124212 3300006871 Bacteria 2597
68 Ga0075429_100046519 3300006880 Bacteria 3776
69 Ga0075429_100071206 3300006880 Bacteria 3027
70 Ga0075436_100057915 3300006914 Bacteria 2676
71 Ga0105240_11350827 3300009093 Bacteria 750
72 Ga0111539_10003780 3300009094 Bacteria 19922
73 Ga0105247_10032607 3300009101 Bacteria 3165
74 Ga0114129_10115245 3300009147 Bacteria 3704
75 Ga0114129_10270111 3300009147 Bacteria 2275
76 Ga0114129_10320047 3300009147 Unclassified 2062
77 Ga0114129_10477412 3300009147 Bacteria 1632
78 Ga0114129_10487935 3300009147 Bacteria 1611
79 Ga0114129_10923453 3300009147 Bacteria 1104
80 Ga0105243_10106042 3300009148 Unclassified 2342
81 Ga0105242_10055862 3300009176 Bacteria 3230
82 Ga0105237_10014214 3300009545 Bacteria 8334
83 Ga0157371_10096175 3300013102 Bacteria 2099
84 Ga0163162_10029348 3300013306 Bacteria 5443
85 Ga0157375_11165268 3300013308 Bacteria 903
86 Ga0157380_10336075 3300014326 Bacteria 1407
87 Ga0157377_10005166 3300014745 Bacteria 6105
88 Ga0157379_10023161 3300014968 Bacteria 5508
89 Ga0163161_10138922 3300017792 Unclassified 1838
90 Ga0207697_10003723 3300025315 Bacteria 7457
91 Ga0207656_10254716 3300025321 Bacteria 861
92 Ga0207642_10205354 3300025899 Bacteria 1091
93 Ga0207710_10022022 3300025900 Bacteria 2733
94 Ga0207688_10021025 3300025901 Bacteria 3564
95 Ga0207647_10051580 3300025904 Bacteria 2542
96 Ga0207684_10486269 3300025910 Bacteria 1058
97 Ga0207662_10002194 3300025918 Bacteria 9729
98 Ga0207662_10507678 3300025918 Bacteria 831
99 Ga0207657_10061814 3300025919 Bacteria 3209
100 Ga0207649_10017524 3300025920 Bacteria 4059
101 Ga0207681_10006229 3300025923 Bacteria 7316
102 Ga0207659_10012286 3300025926 Bacteria 5442
103 Ga0207644_10051992 3300025931 Bacteria 2943
104 Ga0207690_10081381 3300025932 Bacteria 2262
105 Ga0207706_10004730 3300025933 Bacteria 12747
106 Ga0207686_10054888 3300025934 Bacteria 2497
107 Ga0207686_10282390 3300025934 Bacteria 1226
108 Ga0207709_10028943 3300025935 Bacteria 3207
109 Ga0207704_10071352 3300025938 Bacteria 2204
110 Ga0207691_10001313 3300025940 Bacteria 24796
111 Ga0207711_10095235 3300025941 Bacteria 2625
112 Ga0207689_10044840 3300025942 Bacteria 3657
113 Ga0207679_10032362 3300025945 Bacteria 3670
114 Ga0207667_10058546 3300025949 Bacteria 4040
115 Ga0207651_10059630 3300025960 Bacteria 2645
116 Ga0207712_10005745 3300025961 Bacteria 7821
117 Ga0207668_10008240 3300025972 Bacteria 6210
118 Ga0207658_10181448 3300025986 Bacteria 1742
119 Ga0207658_11346139 3300025986 Bacteria 653
120 Ga0207703_10040212 3300026035 Bacteria 3741
121 Ga0207639_10047807 3300026041 Bacteria 3235
122 Ga0207641_10125230 3300026088 Bacteria 2299
123 Ga0207641_11138252 3300026088 Bacteria 779
124 Ga0207648_10017144 3300026089 Bacteria 6600
125 Ga0207648_10560841 3300026089 Bacteria 1050
126 Ga0207674_10013494 3300026116 Bacteria 9061
127 Ga0207674_10157866 3300026116 Bacteria 2223
128 Ga0207675_100000251 3300026118 Bacteria 51303
129 Ga0207698_10078471 3300026142 Bacteria 2651
130 Ga0207428_10000359 3300027907 Bacteria 58826
131 Ga0268266_10120143 3300028379 Bacteria 2338
132 Ga0268266_10368363 3300028379 Bacteria 1353
133 Ga0268265_10348352 3300028380 Bacteria 1351
134 Ga0268265_10514735 3300028380 Bacteria 1130
135 Ga0268264_10003733 3300028381 Bacteria 13079
136 Ga0268264_10030586 3300028381 Bacteria 4413
137 Ga0268264_11773327 3300028381 Bacteria 627
138 Ga0265319_1000001 3300028563 Bacteria 549513
139 Ga0265318_10086820 3300028577 Bacteria 1153
140 Ga0265338_10005950 3300028800 Bacteria 15705
141 Ga0265338_10017881 3300028800 Bacteria 7615
142 Ga0265338_10045928 3300028800 Bacteria 4010
143 Ga0265324_10228293 3300029957 Unclassified 632
144 Ga0265332_10150248 3300031238 Unclassified 974
145 Ga0265320_10010242 3300031240 Bacteria 5594
146 Ga0265325_10267842 3300031241 Bacteria 769
147 Ga0265327_10201428 3300031251 Unclassified 901
148 Ga0265316_10160174 3300031344 Bacteria 1683
149 Ga0265316_10346582 3300031344 Bacteria 1076
150 Ga0307408_100006028 3300031548 Bacteria 8066
151 Ga0265313_10002283 3300031595 Bacteria 16812
152 Ga0316579_10117372 3300031691 Unclassified 1278
153 Ga0316576_10592016 3300031727 Bacteria 810
154 Ga0307405_10020121 3300031731 Bacteria 3723
155 Ga0307405_10983932 3300031731 Bacteria 719
156 Ga0307413_10000782 3300031824 Bacteria 11038
157 Ga0307410_10025067 3300031852 Bacteria 3735
158 Ga0307406_10020144 3300031901 Bacteria 3923
159 Ga0307407_10002775 3300031903 Bacteria 6978
160 Ga0307412_10059839 3300031911 Bacteria 2554
161 Ga0307409_100068696 3300031995 Bacteria 2803
162 Ga0307409_100217331 3300031995 Bacteria 1723
163 Ga0307416_100007545 3300032002 Bacteria 6932
164 Ga0307416_101730739 3300032002 Bacteria 730
165 Ga0307414_10025520 3300032004 Bacteria 3787
166 Ga0307411_10003283 3300032005 Bacteria 7467
167 Ga0307411_11810044 3300032005 Bacteria 567
168 Ga0307415_100007035 3300032126 Bacteria 6120
169 Ga0316593_10421396 3300032168 Bacteria 518
170 Ga0373923_0259550 3300035111 Unclassified 815
171 Ga0373945_0315492 3300035116 Unclassified 672
172 Ga0373955_0527755 3300035172 Unclassified 722
173 Ga0316574_0259710 3300035398 Bacteria 1109
174 Ga0373937_0169680 3300036401 Unclassified 2047
175 Ga0373937_0251331 3300036401 Bacteria 1667
176 Ga0373937_0922741 3300036401 Archaea 822
177 Ga0316582_0219337 3300036647 Bacteria 1300
178 Ga0316584_0051398 3300036712 Bacteria 3081
179 Ga0373925_0303578 3300037068 Unclassified 1289
180 Ga0395905_0667330 3300037471 Bacteria 942
181 Ga0451802_0083357 3300041460 Bacteria 513
182 Ga0451843_1102077 3300041509 Bacteria 633
183 Ga0451843_1191807 3300041509 Bacteria 852
184 Ga0439442_129505 3300042002 Bacteria 555
185 Ga0439440_0049349 3300042993 Bacteria 1048
186 Ga0453684_0264020 3300044712 Bacteria 1971
187 Ga0451576_0057254 3300045051 Bacteria 4074
188 Ga0451576_0152214 3300045051 Unclassified 2412
189 Ga0451576_1252809 3300045051 Unclassified 774
190 Ga0495580_0013837 3300046472 Bacteria 6142
191 Ga0495628_0717931 3300046516 Unclassified 705
192 Ga0495630_0009692 3300046517 Bacteria 6927
193 Ga0495640_0082224 3300046533 Bacteria 2139
194 Ga0495640_0236319 3300046533 Bacteria 1148
195 Ga0495586_0060351 3300046535 Bacteria 2062
196 Ga0495587_0830501 3300046536 Unclassified 504
197 Ga0495645_0570642 3300046543 Bacteria 699
198 Ga0495667_0023927 3300046559 Bacteria 4115
199 Ga0495634_0248061 3300046642 Bacteria 1090
200 Ga0495657_0334076 3300046675 Unclassified 899
201 Ga0495604_0264571 3300047317 Bacteria 1168
202 Ga0495680_0279989 3300047322 Bacteria 1176
203 Ga0495684_0251469 3300047471 Unclassified 1286
204 Ga0501033_0809565 3300049570 Bacteria 633
205 Ga0501034_0797667 3300049571 Bacteria 837
206 Ga0501036_1225101 3300049572 Bacteria 611
207 Ga0501037_0387306 3300049573 Unclassified 960
208 Ga0501038_0449470 3300049574 Bacteria 991
209 Ga0501040_0035508 3300049576 Bacteria 3381
210 Ga0501046_0119811 3300049580 Bacteria 2003
211 Ga0501048_0031149 3300049582 Bacteria 3859
212 Ga0501068_0334760 3300049584 Unclassified 972
213 Ga0501071_0531497 3300049587 Bacteria 903
214 Ga0501072_0298342 3300049588 Bacteria 1281
215 Ga0501074_0087698 3300049590 Bacteria 2228
216 Ga0501075_0713602 3300049591 Bacteria 764
217 Ga0501076_0685982 3300049592 Bacteria 846
218 Ga0501079_0056948 3300049741 Bacteria 3016
219 Ga0501079_0443978 3300049741 Bacteria 1019
220 Ga0501080_0164286 3300049742 Bacteria 2049
221 Ga0501081_0035864 3300049743 Bacteria 3378
222 Ga0501081_0354311 3300049743 Bacteria 1082
223 Ga0501035_0677010 3300049822 Bacteria 834
224 Ga0501044_1659610 3300049823 Bacteria 504
225 Ga0501045_0029591 3300049824 Bacteria 3960
226 Ga0501045_0779239 3300049824 Bacteria 704
227 nmdc:mga03n38_745704_c1 3300050490 Bacteria 567
228 nmdc:mga06z11_499373_c1 3300050494 Bacteria 737
229 nmdc:mga05p37_228483_c1 3300050507 Bacteria 2243
230 nmdc:mga05p37_2709_c2 3300050507 Bacteria 16162
231 nmdc:mga05p37_515815_c1 3300050507 Bacteria 1368
232 nmdc:mga09592_1390213_c1 3300050508 Bacteria 574
233 nmdc:mga09592_9202_c1 3300050508 Bacteria 8035
234 nmdc:mga0qj67_1038305_c1 3300050509 Bacteria 642
235 nmdc:mga0qj67_11699_c1 3300050509 Bacteria 6584
236 nmdc:mga0qj67_2394_c1 3300050509 Bacteria 13370
237 nmdc:mga0qj67_67025_c1 3300050509 Bacteria 2860
238 nmdc:mga06r32_1120312_c1 3300050510 Unclassified 735
239 nmdc:mga06r32_23022_c1 3300050510 Bacteria 5762
240 nmdc:mga08y16_1633372_c1 3300050511 Bacteria 601
241 nmdc:mga08y16_5234_c1 3300050511 Bacteria 13549
242 nmdc:mga0n895_68479_c1 3300050512 Bacteria 3516
243 nmdc:mga08x19_229991_c1 3300050514 Bacteria 1276
244 nmdc:mga0a205_9315_c1 3300050515 Bacteria 8967
245 Ga0500658_0150782 3300053134 Bacteria 1048
246 Ga0500568_0080517 3300053139 Bacteria 1237
247 Ga0500589_115073 3300053147 Bacteria 1148
248 Ga0501084_0546055 3300054114 Bacteria 979
249 Ga0501082_0262961 3300060353 Unclassified 1501

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300041509 Ga0451843_1102077 Ga0451843_1102077_28_456 140
2 3300053147 Ga0500589_115073 Ga0500589_115073_295_723 140
3 3300005843 Ga0068860_100002064 Ga0068860_1000020642 141
4 3300028381 Ga0268264_10003733 Ga0268264_1000373310 141
5 3300005289 Ga0065704_10389716 Ga0065704_103897161 145
6 3300005290 Ga0065712_10196663 Ga0065712_101966631 145
7 3300005293 Ga0065715_10521885 Ga0065715_105218851 145
8 3300005295 Ga0065707_10095864 Ga0065707_100958642 145
9 3300005295 Ga0065707_10107449 Ga0065707_101074492 145
10 3300005329 Ga0070683_100026985 Ga0070683_1000269852 145
11 3300005330 Ga0070690_100170883 Ga0070690_1001708832 145
12 3300005338 Ga0068868_100041371 Ga0068868_1000413712 145
13 3300005339 Ga0070660_100088060 Ga0070660_1000880602 145
14 3300005340 Ga0070689_100171433 Ga0070689_1001714332 145
15 3300005344 Ga0070661_100010271 Ga0070661_1000102712 145
16 3300005353 Ga0070669_100018442 Ga0070669_1000184423 145
17 3300005354 Ga0070675_100006384 Ga0070675_1000063843 145
18 3300005364 Ga0070673_100089675 Ga0070673_1000896752 145
19 3300005366 Ga0070659_100037109 Ga0070659_1000371092 145
20 3300005367 Ga0070667_100087523 Ga0070667_1000875232 145
21 3300005438 Ga0070701_10053020 Ga0070701_100530202 145
22 3300005440 Ga0070705_100326533 Ga0070705_1003265332 145
23 3300005444 Ga0070694_100150561 Ga0070694_1001505613 145
24 3300005455 Ga0070663_100077719 Ga0070663_1000777191 145
25 3300005457 Ga0070662_100066506 Ga0070662_1000665062 145
26 3300005466 Ga0070685_10381911 Ga0070685_103819112 145
27 3300005518 Ga0070699_100726624 Ga0070699_1007266241 145
28 3300005535 Ga0070684_100171525 Ga0070684_1001715252 145
29 3300005539 Ga0068853_100183668 Ga0068853_1001836682 145
30 3300005543 Ga0070672_100014856 Ga0070672_1000148562 145
31 3300005544 Ga0070686_100191545 Ga0070686_1001915451 145
32 3300005545 Ga0070695_101075685 Ga0070695_1010756851 145
33 3300005546 Ga0070696_100377738 Ga0070696_1003777382 145
34 3300005548 Ga0070665_100448213 Ga0070665_1004482132 145
35 3300005563 Ga0068855_100022506 Ga0068855_1000225065 145
36 3300005564 Ga0070664_100036707 Ga0070664_1000367072 145
37 3300005577 Ga0068857_100015676 Ga0068857_1000156762 145
38 3300005577 Ga0068857_100208054 Ga0068857_1002080542 145
39 3300005577 Ga0068857_101054263 Ga0068857_1010542632 145
40 3300005616 Ga0068852_100122617 Ga0068852_1001226172 145
41 3300005719 Ga0068861_100017298 Ga0068861_1000172983 145
42 3300005719 Ga0068861_100475287 Ga0068861_1004752872 145
43 3300005841 Ga0068863_100448487 Ga0068863_1004484873 145
44 3300005842 Ga0068858_100408241 Ga0068858_1004082412 145
45 3300005843 Ga0068860_100087421 Ga0068860_1000874212 145
46 3300005844 Ga0068862_100032887 Ga0068862_1000328872 145
47 3300005844 Ga0068862_100586734 Ga0068862_1005867341 145
48 3300005981 Ga0081538_10280061 Ga0081538_102800611 145
49 3300005985 Ga0081539_10223308 Ga0081539_102233082 145
50 3300006048 Ga0075363_100068413 Ga0075363_1000684132 145
51 3300006048 Ga0075363_100848694 Ga0075363_1008486941 145
52 3300006844 Ga0075428_100010744 Ga0075428_1000107442 145
53 3300006844 Ga0075428_100402534 Ga0075428_1004025341 145
54 3300006852 Ga0075433_10152786 Ga0075433_101527862 145
55 3300006871 Ga0075434_100014815 Ga0075434_1000148153 145
56 3300006871 Ga0075434_100124212 Ga0075434_1001242122 145
57 3300006880 Ga0075429_100046519 Ga0075429_1000465194 145
58 3300009093 Ga0105240_11350827 Ga0105240_113508271 145
59 3300009101 Ga0105247_10032607 Ga0105247_100326072 145
60 3300009147 Ga0114129_10477412 Ga0114129_104774121 145
61 3300009147 Ga0114129_10487935 Ga0114129_104879352 145
62 3300009147 Ga0114129_10923453 Ga0114129_109234532 145
63 3300009148 Ga0105243_10106042 Ga0105243_101060422 145
64 3300013102 Ga0157371_10096175 Ga0157371_100961752 145
65 3300013306 Ga0163162_10029348 Ga0163162_100293482 145
66 3300014326 Ga0157380_10336075 Ga0157380_103360752 145
67 3300014745 Ga0157377_10005166 Ga0157377_100051663 145
68 3300014968 Ga0157379_10023161 Ga0157379_100231613 145
69 3300017792 Ga0163161_10138922 Ga0163161_101389221 145
70 3300025315 Ga0207697_10003723 Ga0207697_100037232 145
71 3300025321 Ga0207656_10254716 Ga0207656_102547162 145
72 3300025900 Ga0207710_10022022 Ga0207710_100220223 145
73 3300025901 Ga0207688_10021025 Ga0207688_100210252 145
74 3300025904 Ga0207647_10051580 Ga0207647_100515802 145
75 3300025918 Ga0207662_10002194 Ga0207662_100021943 145
76 3300025918 Ga0207662_10507678 Ga0207662_105076782 145
77 3300025919 Ga0207657_10061814 Ga0207657_100618142 145
78 3300025920 Ga0207649_10017524 Ga0207649_100175242 145
79 3300025923 Ga0207681_10006229 Ga0207681_100062296 145
80 3300025926 Ga0207659_10012286 Ga0207659_100122866 145
81 3300025931 Ga0207644_10051992 Ga0207644_100519922 145
82 3300025932 Ga0207690_10081381 Ga0207690_100813812 145
83 3300025933 Ga0207706_10004730 Ga0207706_100047306 145
84 3300025934 Ga0207686_10282390 Ga0207686_102823902 145
85 3300025935 Ga0207709_10028943 Ga0207709_100289434 145
86 3300025938 Ga0207704_10071352 Ga0207704_100713522 145
87 3300025940 Ga0207691_10001313 Ga0207691_1000131316 145
88 3300025941 Ga0207711_10095235 Ga0207711_100952352 145
89 3300025942 Ga0207689_10044840 Ga0207689_100448402 145
90 3300025945 Ga0207679_10032362 Ga0207679_100323622 145
91 3300025949 Ga0207667_10058546 Ga0207667_100585462 145
92 3300025960 Ga0207651_10059630 Ga0207651_100596302 145
93 3300025961 Ga0207712_10005745 Ga0207712_100057452 145
94 3300025972 Ga0207668_10008240 Ga0207668_100082402 145
95 3300025986 Ga0207658_10181448 Ga0207658_101814482 145
96 3300025986 Ga0207658_11346139 Ga0207658_113461391 145
97 3300026035 Ga0207703_10040212 Ga0207703_100402122 145
98 3300026041 Ga0207639_10047807 Ga0207639_100478072 145
99 3300026088 Ga0207641_10125230 Ga0207641_101252301 145
100 3300026088 Ga0207641_11138252 Ga0207641_111382522 145
101 3300026116 Ga0207674_10013494 Ga0207674_100134942 145
102 3300026116 Ga0207674_10157866 Ga0207674_101578662 145
103 3300026118 Ga0207675_100000251 Ga0207675_1000002517 145
104 3300026142 Ga0207698_10078471 Ga0207698_100784712 145
105 3300028379 Ga0268266_10120143 Ga0268266_101201432 145
106 3300028379 Ga0268266_10368363 Ga0268266_103683632 145
107 3300028380 Ga0268265_10348352 Ga0268265_103483522 145
108 3300028380 Ga0268265_10514735 Ga0268265_105147352 145
109 3300028381 Ga0268264_10030586 Ga0268264_100305863 145
110 3300028563 Ga0265319_1000001 Ga0265319_1000001400 145
111 3300028577 Ga0265318_10086820 Ga0265318_100868201 145
112 3300028800 Ga0265338_10005950 Ga0265338_1000595011 145
113 3300028800 Ga0265338_10017881 Ga0265338_100178816 145
114 3300028800 Ga0265338_10045928 Ga0265338_100459282 145
115 3300029957 Ga0265324_10228293 Ga0265324_102282931 145
116 3300031238 Ga0265332_10150248 Ga0265332_101502482 145
117 3300031240 Ga0265320_10010242 Ga0265320_100102429 145
118 3300031251 Ga0265327_10201428 Ga0265327_102014282 145
119 3300031344 Ga0265316_10160174 Ga0265316_101601743 145
120 3300031548 Ga0307408_100006028 Ga0307408_1000060283 145
121 3300031595 Ga0265313_10002283 Ga0265313_1000228319 145
122 3300031727 Ga0316576_10592016 Ga0316576_105920162 145
123 3300031731 Ga0307405_10020121 Ga0307405_100201213 145
124 3300031824 Ga0307413_10000782 Ga0307413_1000078210 145
125 3300031852 Ga0307410_10025067 Ga0307410_100250674 145
126 3300031901 Ga0307406_10020144 Ga0307406_100201444 145
127 3300031903 Ga0307407_10002775 Ga0307407_100027757 145
128 3300031911 Ga0307412_10059839 Ga0307412_100598394 145
129 3300031995 Ga0307409_100068696 Ga0307409_1000686963 145
130 3300031995 Ga0307409_100217331 Ga0307409_1002173312 145
131 3300032002 Ga0307416_100007545 Ga0307416_1000075456 145
132 3300032002 Ga0307416_101730739 Ga0307416_1017307391 145
133 3300032004 Ga0307414_10025520 Ga0307414_100255204 145
134 3300032005 Ga0307411_10003283 Ga0307411_100032837 145
135 3300032005 Ga0307411_11810044 Ga0307411_118100441 145
136 3300032126 Ga0307415_100007035 Ga0307415_1000070353 145
137 3300036401 Ga0373937_0169680 Ga0373937_0169680_188_625 145
138 3300036401 Ga0373937_0251331 Ga0373937_0251331_348_785 145
139 3300036401 Ga0373937_0922741 Ga0373937_0922741_141_581 145
140 3300036647 Ga0316582_0219337 Ga0316582_0219337_769_1209 145
141 3300036712 Ga0316584_0051398 Ga0316584_0051398_1555_1992 145
142 3300041460 Ga0451802_0083357 Ga0451802_0083357_15_452 145
143 3300041509 Ga0451843_1191807 Ga0451843_1191807_302_775 145
144 3300042002 Ga0439442_129505 Ga0439442_129505_23_460 145
145 3300045051 Ga0451576_0152214 Ga0451576_0152214_271_720 145
146 3300045051 Ga0451576_1252809 Ga0451576_1252809_217_654 145
147 3300046516 Ga0495628_0717931 Ga0495628_0717931_164_601 145
148 3300046517 Ga0495630_0009692 Ga0495630_0009692_2668_3105 145
149 3300046533 Ga0495640_0082224 Ga0495640_0082224_729_1166 145
150 3300046533 Ga0495640_0236319 Ga0495640_0236319_33_470 145
151 3300046535 Ga0495586_0060351 Ga0495586_0060351_914_1351 145
152 3300046536 Ga0495587_0830501 Ga0495587_0830501_26_463 145
153 3300046543 Ga0495645_0570642 Ga0495645_0570642_13_450 145
154 3300046559 Ga0495667_0023927 Ga0495667_0023927_966_1403 145
155 3300046642 Ga0495634_0248061 Ga0495634_0248061_384_821 145
156 3300046675 Ga0495657_0334076 Ga0495657_0334076_168_605 145
157 3300047317 Ga0495604_0264571 Ga0495604_0264571_693_1130 145
158 3300047322 Ga0495680_0279989 Ga0495680_0279989_445_882 145
159 3300047471 Ga0495684_0251469 Ga0495684_0251469_690_1127 145
160 3300049570 Ga0501033_0809565 Ga0501033_0809565_92_532 145
161 3300049571 Ga0501034_0797667 Ga0501034_0797667_356_793 145
162 3300049574 Ga0501038_0449470 Ga0501038_0449470_280_720 145
163 3300049584 Ga0501068_0334760 Ga0501068_0334760_480_917 145
164 3300049588 Ga0501072_0298342 Ga0501072_0298342_310_750 145
165 3300049591 Ga0501075_0713602 Ga0501075_0713602_77_517 145
166 3300049741 Ga0501079_0443978 Ga0501079_0443978_250_690 145
167 3300049743 Ga0501081_0354311 Ga0501081_0354311_218_658 145
168 3300049824 Ga0501045_0779239 Ga0501045_0779239_199_639 145
169 3300050490 nmdc:mga03n38_745704_c1 nmdc:mga03n38_745704_c1_87_524 145
170 3300050494 nmdc:mga06z11_499373_c1 nmdc:mga06z11_499373_c1_22_459 145
171 3300050507 nmdc:mga05p37_228483_c1 nmdc:mga05p37_228483_c1_324_761 145
172 3300050507 nmdc:mga05p37_2709_c2 nmdc:mga05p37_2709_c2_2719_3156 145
173 3300050508 nmdc:mga09592_1390213_c1 nmdc:mga09592_1390213_c1_23_460 145
174 3300050508 nmdc:mga09592_9202_c1 nmdc:mga09592_9202_c1_543_980 145
175 3300050509 nmdc:mga0qj67_1038305_c1 nmdc:mga0qj67_1038305_c1_97_534 145
176 3300050510 nmdc:mga06r32_1120312_c1 nmdc:mga06r32_1120312_c1_65_502 145
177 3300050512 nmdc:mga0n895_68479_c1 nmdc:mga0n895_68479_c1_1173_1610 145
178 3300050515 nmdc:mga0a205_9315_c1 nmdc:mga0a205_9315_c1_7620_8057 145
179 3300053134 Ga0500658_0150782 Ga0500658_0150782_256_693 145
180 3300053139 Ga0500568_0080517 Ga0500568_0080517_527_994 145
181 3300054114 Ga0501084_0546055 Ga0501084_0546055_215_655 145
182 3300003203 JGI25406J46586_10072215 JGI25406J46586_100722151 146
183 3300005985 Ga0081539_10000117 Ga0081539_100001171 146
184 3300006844 Ga0075428_100082437 Ga0075428_1000824373 146
185 3300006846 Ga0075430_100025832 Ga0075430_1000258322 146
186 3300006880 Ga0075429_100071206 Ga0075429_1000712064 146
187 3300009094 Ga0111539_10003780 Ga0111539_100037803 146
188 3300009147 Ga0114129_10115245 Ga0114129_101152454 146
189 3300009545 Ga0105237_10014214 Ga0105237_100142145 146
190 3300027907 Ga0207428_10000359 Ga0207428_1000035921 146
191 3300031241 Ga0265325_10267842 Ga0265325_102678421 146
192 3300031344 Ga0265316_10346582 Ga0265316_103465822 146
193 3300031731 Ga0307405_10983932 Ga0307405_109839322 146
194 3300032168 Ga0316593_10421396 Ga0316593_104213961 146
195 3300035111 Ga0373923_0259550 Ga0373923_0259550_198_638 146
196 3300035172 Ga0373955_0527755 Ga0373955_0527755_49_489 146
197 3300042993 Ga0439440_0049349 Ga0439440_0049349_326_766 146
198 3300049572 Ga0501036_1225101 Ga0501036_1225101_119_562 146
199 3300049573 Ga0501037_0387306 Ga0501037_0387306_43_483 146
200 3300049576 Ga0501040_0035508 Ga0501040_0035508_1091_1531 146
201 3300049580 Ga0501046_0119811 Ga0501046_0119811_132_572 146
202 3300049582 Ga0501048_0031149 Ga0501048_0031149_1133_1573 146
203 3300049587 Ga0501071_0531497 Ga0501071_0531497_55_495 146
204 3300049590 Ga0501074_0087698 Ga0501074_0087698_1134_1574 146
205 3300049592 Ga0501076_0685982 Ga0501076_0685982_251_691 146
206 3300049741 Ga0501079_0056948 Ga0501079_0056948_704_1144 146
207 3300049742 Ga0501080_0164286 Ga0501080_0164286_1292_1732 146
208 3300049743 Ga0501081_0035864 Ga0501081_0035864_196_636 146
209 3300049822 Ga0501035_0677010 Ga0501035_0677010_119_559 146
210 3300049823 Ga0501044_1659610 Ga0501044_1659610_24_473 146
211 3300049824 Ga0501045_0029591 Ga0501045_0029591_1363_1803 146
212 3300050509 nmdc:mga0qj67_67025_c1 nmdc:mga0qj67_67025_c1_676_1116 146
213 3300050511 nmdc:mga08y16_5234_c1 nmdc:mga08y16_5234_c1_7959_8399 146
214 3300060353 Ga0501082_0262961 Ga0501082_0262961_959_1399 146
215 iso_pu_bacteria 2687453341 2688391457 146
216 3300003203 JGI25406J46586_10002300 JGI25406J46586_100023005 147
217 3300005459 Ga0068867_100084864 Ga0068867_1000848642 147
218 3300005471 Ga0070698_100198485 Ga0070698_1001984852 147
219 3300005985 Ga0081539_10000175 Ga0081539_10000175133 147
220 3300005985 Ga0081539_10004285 Ga0081539_1000428511 147
221 3300005985 Ga0081539_10009373 Ga0081539_100093732 147
222 3300006178 Ga0075367_10151157 Ga0075367_101511571 147
223 3300006846 Ga0075430_100000875 Ga0075430_10000087521 147
224 3300006846 Ga0075430_100010003 Ga0075430_1000100032 147
225 3300006847 Ga0075431_100000393 Ga0075431_10000039331 147
226 3300006914 Ga0075436_100057915 Ga0075436_1000579153 147
227 3300009147 Ga0114129_10270111 Ga0114129_102701112 147
228 3300009147 Ga0114129_10320047 Ga0114129_103200471 147
229 3300009176 Ga0105242_10055862 Ga0105242_100558622 147
230 3300013308 Ga0157375_11165268 Ga0157375_111652681 147
231 3300025899 Ga0207642_10205354 Ga0207642_102053542 147
232 3300025910 Ga0207684_10486269 Ga0207684_104862692 147
233 3300025934 Ga0207686_10054888 Ga0207686_100548882 147
234 3300026089 Ga0207648_10017144 Ga0207648_100171444 147
235 3300026089 Ga0207648_10560841 Ga0207648_105608412 147
236 3300028381 Ga0268264_11773327 Ga0268264_117733271 147
237 3300031691 Ga0316579_10117372 Ga0316579_101173722 147
238 3300035116 Ga0373945_0315492 Ga0373945_0315492_87_530 147
239 3300035398 Ga0316574_0259710 Ga0316574_0259710_273_719 147
240 3300037068 Ga0373925_0303578 Ga0373925_0303578_506_949 147
241 3300037471 Ga0395905_0667330 Ga0395905_0667330_98_673 147
242 3300044712 Ga0453684_0264020 Ga0453684_0264020_12_521 147
243 3300045051 Ga0451576_0057254 Ga0451576_0057254_43_504 147
244 3300046472 Ga0495580_0013837 Ga0495580_0013837_2761_3204 147
245 3300050507 nmdc:mga05p37_515815_c1 nmdc:mga05p37_515815_c1_431_898 147
246 3300050509 nmdc:mga0qj67_11699_c1 nmdc:mga0qj67_11699_c1_3154_3600 147
247 3300050509 nmdc:mga0qj67_2394_c1 nmdc:mga0qj67_2394_c1_9285_9728 147
248 3300050510 nmdc:mga06r32_23022_c1 nmdc:mga06r32_23022_c1_1877_2323 147
249 3300050511 nmdc:mga08y16_1633372_c1 nmdc:mga08y16_1633372_c1_58_537 147
250 3300050514 nmdc:mga08x19_229991_c1 nmdc:mga08x19_229991_c1_604_1047 147

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00383

dCMP_cyt_deam_1

Cytidine and deoxycytidylate deaminase zinc-binding region

1

94

0.92

PF14437

MafB19-deam

MafB19-like deaminase

1

131

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
1ysd-assembly1.cif.gz_A yeast cytosine deaminase double mutant 0.9724 7 147
1ysb-assembly1.cif.gz_A yeast cytosine deaminase triple mutant 0.9721 7 147
2o3k-assembly1.cif.gz_B yeast cytosine deaminase d92e triple mutant bound to transition state analogue hpy 0.9711 7 147
1p6o-assembly1.cif.gz_A the crystal structure of yeast cytosine deaminase bound to 4(r)-hydroxyl-3,4-dihydropyrimidine at 1.14 angstroms. 0.97 7 147
1ysd-assembly1.cif.gz_A yeast cytosine deaminase double mutant 0.9272 7 147
ID Description Score Start End Superfamily
af_P78594_2_150_3.40.140.10 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.959 1 147 3.40.140.10
af_P78594_2_150_3.40.140.10 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9527 1 147 3.40.140.10
af_F1QGG7_15_242_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.93 25 38 2.60.40.10
af_Q9VEM0_1_160_3.40.140.10 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.8857 6 135 3.40.140.10
af_A0A1D8PGE9_1_163_3.40.140.10 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.8817 8 133 3.40.140.10
ID Description Score Start End GO Terms
AF-A0A7S4I2A5-F1-model_v4 CMP/dCMP-type deaminase domain-containing protein 1.004 6 96 GO:0008835
AF-A0A1E3X3B7-F1-model_v4 Cytosine deaminase 1.003 3 89 GO:0008835
AF-A0A1G1M0P6-F1-model_v4 tRNA-specific adenosine deaminase 1.001 6 122 GO:0008835
AF-A0A421GCC5-F1-model_v4 CMP/dCMP-type deaminase domain-containing protein 0.9977 1 147 GO:0006631
GO:0031956
AF-A0A7C5IPB2-F1-model_v4 Nucleoside deaminase 0.9972 3 96 GO:0008835

Feature Viewer

pLDDT pTM Quality
96.23 0.91 High
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Predicted Structure (AlphaFold2)

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