F361751

General Info

Members Datasets Scaffolds Average Seq Length
250 189 224 480

Family's Representative Sequence

Representative Sequence 3300039447|Ga0436361_0241662|Ga0436361_0241662_5541_7136
Length 531
Sequence MRRSIGGRDELGRFSPALWPQATSQTLGGCSRIANPGCLSLADKNEETMNERLSTLDPVHTAMQDTFLAQRLAFSRHTHPSAVERREHLRALKRQLHRYQDVLAEAISRDFSFRSPAESKMLDMLGTTLEINHAISHVARWMRPRRRSTELLFASNSLRVTYQPKGVVGIIVPWNFPLYLALGPLCAALTAGNRAMIKMPEITPATNAVLRRMLAEVFATDQVAVVGEELLDPNAFTSLPFDHIVFTGSPAVGKIVMRTAAENLTPVTLELGGKSPALVTRGYSIAEAARRITHGKSSNCGQICVAPDYALVPREQVDEFVMQVRSSFARSFGSRVAGHPDYTAVVNERHHARIVALLDDARAKGAVIHACAEGGYGRQMPLHVVTNLSADMRLMQEEIFGPILPVVPYDTLDQAIAHVRRGPRPLALYAFGHDAAERERVLRETHSGGVTINDWGWHVINHDAPFGGVGNSGMGNYHGAEGFRELSHAKTVFKRHRFFPIGLFYPPYGNVVQRLVLKLWLGKADPSVGAP

Samples

Sample ID Description Type Environment
1 2501025502 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
2 2510917013 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
3 2551306352 Acinetobacter sp. GG2 Isolate Rhizosphere
4 2551306416 Herbaspirillum seropedicae Os34 Isolate Unclassified
5 2585428045 Chryseobacterium sp. OV705 Isolate Rhizosphere
6 2585428187 Chryseobacterium sp. YR460 Isolate Rhizosphere
7 2588254255 Chryseobacterium sp. YR221 Isolate Rhizosphere
8 2639762793 Acinetobacter calcoaceticus GK1 Isolate Rhizosphere
9 2675903507 Acinetobacter calcoaceticus GK2 Isolate Unclassified
10 2738541300 Massilia sp. GV016 Isolate Unclassified
11 2738543013 Variovorax sp. BT01 Isolate Unclassified
12 2738543018 Massilia sp. GV045 Isolate Unclassified
13 2738543030 Massilia sp. GV097 Isolate Unclassified
14 2744054900 Paraburkholderia ginsengiterrae DCY85-1 Isolate Unclassified
15 2744054901 Paraburkholderia ginsengiterrae DCY85 Isolate Unclassified
16 2773857761 Acinetobacter sp. 3664 Isolate Unclassified
17 2773857770 Acinetobacter sp. 3636 Isolate Unclassified
18 2905999023 Chryseobacterium elymi KCTC 22547 Isolate Rhizosphere
19 2916178963 Pseudoalteromonas rhizosphaerae RA15 Isolate Rhizosphere
20 2919182534 Acinetobacter calcoaceticus 2589 Isolate Rhizosphere
21 2919506607 Acinetobacter sp. 3657 Isolate Unclassified
22 2919509842 Flavobacterium arsenatis 3773 Isolate Unclassified
23 2923510766 Herbaspirillum rubrisubalbicans SLBN-127 Isolate Rhizosphere
24 2929520902 Variovorax beijingensis 502 Isolate Unclassified
25 2946019816 Chryseobacterium sp. W4I1 Isolate Rhizosphere
26 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
27 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
28 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
29 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
30 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
31 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
32 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
33 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
34 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
35 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
36 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
37 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
38 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
39 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
40 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
41 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
42 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
43 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
44 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
45 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
46 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
47 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
48 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
49 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
50 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
51 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
52 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
53 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
54 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
55 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
56 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
57 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
58 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
59 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
60 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
61 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
62 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
63 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
64 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
65 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
66 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
67 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
68 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
69 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
70 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
71 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
72 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
73 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
74 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
75 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
76 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
77 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
78 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
79 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
80 3300015683 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_F04 Metagenome Rhizosphere
81 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
82 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
83 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
88 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
89 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
90 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
91 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
92 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
93 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
94 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
95 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
96 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
97 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
98 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
128 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
129 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
131 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
132 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
133 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
134 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
135 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
136 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
137 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
138 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
139 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
140 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
141 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
142 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
143 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
144 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
145 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
146 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
147 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
148 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
149 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
150 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
151 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
152 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
153 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
154 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
155 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
156 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
157 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
158 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
159 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
160 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
161 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
162 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
163 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
164 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
165 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
166 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
167 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
168 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
169 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
170 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
171 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
172 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
173 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
174 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
175 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
176 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
177 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
178 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
179 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
180 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
181 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
182 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
183 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
184 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
185 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
186 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
187 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
188 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
189 8006984368 Bradyrhizobium sp. SRL28 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 89.6
Metatranscriptomes 0
Isolates 10.4

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.2
Nodule 0.8
Rhizoplane 2.4
Rhizosphere 75.6
Stem 0
Stem Tuber 0
Unclassified 10

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25162J39368_1000005 3300002737 Bacteria 435925
2 JGI25162J39368_1000061 3300002737 Bacteria 136847
3 JGI25164J39214_1003086 3300002772 Bacteria 2223
4 JGI25165J46597_1000117 3300003214 Bacteria 137891
5 rootL2_10006714 3300003322 Bacteria 32457
6 rootL2_10017322 3300003322 Bacteria 2612
7 rootH1_10012210 3300003323 Bacteria 61025
8 rootH1_10094000 3300003323 Bacteria 7939
9 Ga0055538_1000046 3300003751 Bacteria 137891
10 Ga0055539_1000065 3300003752 Bacteria 136847
11 Ga0055533_1000075 3300003756 Bacteria 137891
12 Ga0055525_1000095 3300003759 Bacteria 137891
13 Ga0055541_1000047 3300003841 Bacteria 136847
14 Ga0058692_1000063 3300003856 Bacteria 93069
15 Ga0065704_10000582 3300005289 Bacteria 15947
16 Ga0065704_10095133 3300005289 Bacteria 2504
17 Ga0070658_10066811 3300005327 Bacteria 2937
18 Ga0070676_10052975 3300005328 Bacteria 2388
19 Ga0070676_10081334 3300005328 Bacteria 1966
20 Ga0070670_100000443 3300005331 Bacteria 33742
21 Ga0070670_100001588 3300005331 Bacteria 18336
22 Ga0070670_100098270 3300005331 Bacteria 2519
23 Ga0070668_100007412 3300005347 Bacteria 8143
24 Ga0070668_100013150 3300005347 Bacteria 6170
25 Ga0070669_100011314 3300005353 Bacteria 6334
26 Ga0070675_100012995 3300005354 Bacteria 6538
27 Ga0070673_100003101 3300005364 Bacteria 10291
28 Ga0070711_100028972 3300005439 Bacteria 3648
29 Ga0070663_100022948 3300005455 Bacteria 4177
30 Ga0070678_100005740 3300005456 Bacteria 7214
31 Ga0070678_100008002 3300005456 Bacteria 6301
32 Ga0070678_100147439 3300005456 Bacteria 1891
33 Ga0070681_10116829 3300005458 Bacteria 2604
34 Ga0068867_100003256 3300005459 Bacteria 11440
35 Ga0068853_100093394 3300005539 Bacteria 2648
36 Ga0070672_100000249 3300005543 Bacteria 30273
37 Ga0070672_100000488 3300005543 Bacteria 23080
38 Ga0070672_100051642 3300005543 Bacteria 3208
39 Ga0070672_100095273 3300005543 Bacteria 2407
40 Ga0070686_100041216 3300005544 Bacteria 2885
41 Ga0070665_100122187 3300005548 Bacteria 2606
42 Ga0068864_100069043 3300005618 Bacteria 3072
43 Ga0068866_10036036 3300005718 Bacteria 2421
44 Ga0068870_10092480 3300005840 Bacteria 1694
45 Ga0068863_100187971 3300005841 Bacteria 1985
46 Ga0068860_100008504 3300005843 Bacteria 10225
47 Ga0081455_10064002 3300005937 Bacteria 3082
48 Ga0075367_10000290 3300006178 Bacteria 17588
49 Ga0097621_100014909 3300006237 Bacteria 5832
50 Ga0097621_100022583 3300006237 Bacteria 4886
51 Ga0068871_100011778 3300006358 Bacteria 6427
52 Ga0075428_100018052 3300006844 Bacteria 7795
53 Ga0079104_1004543 3300006946 Bacteria 5887
54 Ga0079104_1014814 3300006946 Bacteria 2338
55 Ga0105251_10063499 3300009011 Bacteria 1732
56 Ga0105244_10002193 3300009036 Bacteria 14944
57 Ga0105250_10001288 3300009092 Bacteria 13765
58 Ga0105240_10077182 3300009093 Bacteria 4105
59 Ga0105240_10108166 3300009093 Bacteria 3369
60 Ga0111539_10002036 3300009094 Bacteria 27011
61 Ga0111539_10193303 3300009094 Bacteria 2374
62 Ga0105247_10000251 3300009101 Bacteria 49900
63 Ga0105243_10000090 3300009148 Bacteria 102483
64 Ga0105243_10000155 3300009148 Bacteria 78612
65 Ga0105243_10016905 3300009148 Bacteria 5516
66 Ga0105237_10018258 3300009545 Bacteria 7258
67 Ga0105249_10064600 3300009553 Bacteria 3365
68 Ga0105239_10000038 3300010375 Bacteria 205230
69 Ga0157370_10039199 3300013104 Bacteria 4579
70 Ga0163162_10080762 3300013306 Bacteria 3320
71 Ga0157375_10012518 3300013308 Bacteria 7529
72 Ga0157375_10058161 3300013308 Bacteria 3824
73 Ga0157376_10003647 3300014969 Bacteria 10627
74 Ga0182006_1000012 3300015261 Bacteria 394239
75 Ga0183362_10001 3300015683 Bacteria 2046624
76 Ga0163161_10000607 3300017792 Bacteria 28643
77 Ga0163161_10002111 3300017792 Bacteria 14385
78 Ga0213872_10000351 3300021361 Bacteria 38881
79 Ga0213872_10026770 3300021361 Bacteria 2649
80 Ga0209784_100010 3300025224 Bacteria 683664
81 Ga0209566_100008 3300025225 Bacteria 683664
82 Ga0209674_100019 3300025226 Bacteria 683664
83 Ga0209563_100021 3300025230 Bacteria 683764
84 Ga0207427_100206 3300025231 Bacteria 53709
85 Ga0209437_100019 3300025233 Bacteria 683764
86 Ga0209677_100011 3300025253 Bacteria 683664
87 Ga0209233_1000025 3300025261 Bacteria 683764
88 Ga0209565_1007354 3300025263 Bacteria 2980
89 Ga0209130_1002062 3300025284 Bacteria 10861
90 Ga0209675_1001561 3300025291 Bacteria 12997
91 Ga0209676_1011210 3300025292 Bacteria 3640
92 Ga0209025_1000151 3300025294 Bacteria 172081
93 Ga0209051_1003946 3300025303 Bacteria 9451
94 Ga0209257_1012478 3300025304 Bacteria 3918
95 Ga0207697_10007024 3300025315 Bacteria 5042
96 Ga0207696_1001173 3300025711 Bacteria 14949
97 Ga0207696_1001447 3300025711 Bacteria 12882
98 Ga0207655_1000612 3300025728 Bacteria 43148
99 Ga0207655_1000947 3300025728 Bacteria 30071
100 Ga0207713_1001490 3300025735 Bacteria 18513
101 Ga0207713_1002830 3300025735 Bacteria 12207
102 Ga0207713_1003827 3300025735 Bacteria 10070
103 Ga0207682_10005251 3300025893 Bacteria 5297
104 Ga0207710_10000009 3300025900 Bacteria 485205
105 Ga0207688_10017874 3300025901 Bacteria 3859
106 Ga0207645_10018510 3300025907 Bacteria 4581
107 Ga0207645_10068262 3300025907 Bacteria 2273
108 Ga0207643_10094908 3300025908 Bacteria 1742
109 Ga0207693_10028211 3300025915 Bacteria 4435
110 Ga0207663_10062181 3300025916 Bacteria 2372
111 Ga0207650_10002563 3300025925 Bacteria 12589
112 Ga0207659_10002771 3300025926 Bacteria 10453
113 Ga0207644_10012071 3300025931 Bacteria 5729
114 Ga0207706_10062366 3300025933 Bacteria 3282
115 Ga0207709_10000001 3300025935 Bacteria 2228154
116 Ga0207709_10000376 3300025935 Bacteria 44608
117 Ga0207709_10013071 3300025935 Bacteria 4576
118 Ga0207669_10004384 3300025937 Bacteria 6206
119 Ga0207704_10038888 3300025938 Bacteria 2764
120 Ga0207665_10076840 3300025939 Bacteria 2291
121 Ga0207691_10000049 3300025940 Bacteria 94813
122 Ga0207691_10009013 3300025940 Bacteria 9567
123 Ga0207691_10023111 3300025940 Bacteria 5855
124 Ga0207691_10040163 3300025940 Bacteria 4325
125 Ga0207651_10003094 3300025960 Bacteria 8088
126 Ga0207712_10025627 3300025961 Bacteria 3920
127 Ga0207668_10003414 3300025972 Bacteria 9316
128 Ga0207668_10028234 3300025972 Bacteria 3666
129 Ga0207658_10019998 3300025986 Bacteria 4634
130 Ga0207658_10128101 3300025986 Bacteria 2035
131 Ga0207708_10060837 3300026075 Bacteria 2883
132 Ga0207648_10000701 3300026089 Bacteria 37529
133 Ga0207648_10146663 3300026089 Bacteria 2081
134 Ga0207676_10055764 3300026095 Bacteria 3104
135 Ga0207675_100032164 3300026118 Bacteria 4887
136 Ga0207675_100084904 3300026118 Bacteria 2971
137 Ga0207683_10000610 3300026121 Bacteria 32987
138 Ga0207683_10013576 3300026121 Bacteria 6948
139 Ga0207683_10017682 3300026121 Bacteria 6080
140 Ga0207683_10060021 3300026121 Bacteria 3342
141 Ga0207683_10256264 3300026121 Bacteria 1597
142 Ga0209371_1000006 3300027312 Bacteria 1055642
143 Ga0207428_10084486 3300027907 Bacteria 2474
144 Ga0268264_10028610 3300028381 Bacteria 4560
145 Ga0265336_10000351 3300028666 Bacteria 30084
146 Ga0265324_10000004 3300029957 Bacteria 356972
147 Ga0268256_1000007 3300030500 Bacteria 1055326
148 Ga0265325_10000133 3300031241 Bacteria 51600
149 Ga0307513_10066244 3300031456 Bacteria 3797
150 Ga0307408_100001756 3300031548 Bacteria 15810
151 Ga0265314_10079170 3300031711 Bacteria 2173
152 Ga0307412_10000282 3300031911 Bacteria 32421
153 Ga0307412_10007554 3300031911 Bacteria 6172
154 Ga0307416_100000171 3300032002 Bacteria 36459
155 Ga0307414_10103311 3300032004 Bacteria 2150
156 Ga0307411_10000418 3300032005 Bacteria 14510
157 Ga0373925_0025804 3300037068 Bacteria 4296
158 Ga0395900_0000841 3300037418 Bacteria 40451
159 Ga0436361_0113928 3300039447 Bacteria 16446
160 Ga0436361_0238645 3300039447 Bacteria 7476
161 Ga0436361_0241662 3300039447 Bacteria 8661
162 Ga0436361_0906911 3300039447 Bacteria 7184
163 Ga0436361_0916159 3300039447 Bacteria 49060
164 Ga0436361_1052205 3300039447 Bacteria 3294
165 Ga0451577_0000002 3300042876 Bacteria 1731375
166 Ga0451577_0018620 3300042876 Bacteria 6395
167 Ga0453683_0000013 3300044673 Bacteria 371932
168 Ga0453683_0004185 3300044673 Bacteria 10324
169 Ga0453684_0000002 3300044712 Bacteria 1731375
170 Ga0453684_0000040 3300044712 Bacteria 690210
171 Ga0453684_0011888 3300044712 Bacteria 14496
172 Ga0453684_0170446 3300044712 Bacteria 2566
173 Ga0453684_0195190 3300044712 Bacteria 2365
174 Ga0451576_0000037 3300045051 Bacteria 372173
175 Ga0451576_0005044 3300045051 Bacteria 16744
176 Ga0495603_0093281 3300046455 Bacteria 1759
177 Ga0495629_0000600 3300046459 Bacteria 29285
178 Ga0495580_0004200 3300046472 Bacteria 12113
179 Ga0495580_0011221 3300046472 Bacteria 6933
180 Ga0495580_0019683 3300046472 Bacteria 5012
181 Ga0495607_0122559 3300046501 Bacteria 1362
182 Ga0495606_0023796 3300046507 Bacteria 4429
183 Ga0495610_0000009 3300046512 Bacteria 554843
184 Ga0495632_0004462 3300046519 Bacteria 9505
185 Ga0495644_0047783 3300046523 Bacteria 1607
186 Ga0495663_0000061 3300046525 Bacteria 50786
187 Ga0495663_0010168 3300046525 Bacteria 2613
188 Ga0495666_0004196 3300046526 Bacteria 7267
189 Ga0495642_0001642 3300046528 Bacteria 9722
190 Ga0495665_0006421 3300046531 Bacteria 6347
191 Ga0495597_0002358 3300046542 Bacteria 12147
192 Ga0495645_0001084 3300046543 Bacteria 18434
193 Ga0495622_0058991 3300046557 Bacteria 1777
194 Ga0495633_0004329 3300046558 Bacteria 9063
195 Ga0495667_0036871 3300046559 Bacteria 3260
196 Ga0495656_0000042 3300046615 Bacteria 62167
197 Ga0495625_0000310 3300046660 Bacteria 74325
198 Ga0495625_0002452 3300046660 Bacteria 20039
199 Ga0495588_0009934 3300046674 Bacteria 4411
200 Ga0495669_0004605 3300046684 Bacteria 5712
201 Ga0495669_0018835 3300046684 Bacteria 2973
202 Ga0495660_0001620 3300046810 Bacteria 15108
203 Ga0495581_0027252 3300047315 Bacteria 3313
204 Ga0495604_0011023 3300047317 Bacteria 7174
205 Ga0495683_0004980 3300047323 Bacteria 7436
206 Ga0495686_0011655 3300047472 Bacteria 6189
207 Ga0495593_0038233 3300047673 Bacteria 2592
208 Ga0496100_0032904 3300048903 Bacteria 3239
209 Ga0496100_0054568 3300048903 Bacteria 2607
210 Ga0496101_0056891 3300048904 Bacteria 2827
211 Ga0496106_0082814 3300048909 Bacteria 2467
212 Ga0496109_0043758 3300048912 Bacteria 4059
213 Ga0496114_0001750 3300048917 Bacteria 16469
214 Ga0496121_0000169 3300048924 Bacteria 144577
215 Ga0496121_0019838 3300048924 Bacteria 6695
216 Ga0496122_0000118 3300048925 Bacteria 182789
217 Ga0496122_0017070 3300048925 Bacteria 6812
218 Ga0496123_0009854 3300048926 Bacteria 8533
219 Ga0496125_0018421 3300048928 Bacteria 6631
220 Ga0501037_0034974 3300049573 Bacteria 3706
221 nmdc:mga03n38_7443_c1 3300050490 Bacteria 3875
222 nmdc:mga06z11_944_c1 3300050494 Bacteria 10583
223 nmdc:mga08y16_39931_c1 3300050511 Bacteria 4923
224 Ga0500634_0033714 3300053161 Bacteria 2791

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300039447 Ga0436361_1052205 Ga0436361_1052205_2154_3272 368
2 3300046501 Ga0495607_0122559 Ga0495607_0122559_151_1350 373
3 3300009093 Ga0105240_10077182 Ga0105240_100771821 424
4 3300053161 Ga0500634_0033714 Ga0500634_0033714_762_2186 434
5 3300046455 Ga0495603_0093281 Ga0495603_0093281_320_1678 436
6 3300046523 Ga0495644_0047783 Ga0495644_0047783_38_1396 436
7 3300025294 Ga0209025_1000151 Ga0209025_100015199 438
8 3300002737 JGI25162J39368_1000061 JGI25162J39368_100006184 440
9 3300002772 JGI25164J39214_1003086 JGI25164J39214_10030862 440
10 3300003214 JGI25165J46597_1000117 JGI25165J46597_100011734 440
11 3300003751 Ga0055538_1000046 Ga0055538_100004634 440
12 3300003752 Ga0055539_1000065 Ga0055539_100006584 440
13 3300003756 Ga0055533_1000075 Ga0055533_100007534 440
14 3300003759 Ga0055525_1000095 Ga0055525_100009534 440
15 3300003841 Ga0055541_1000047 Ga0055541_100004784 440
16 3300015261 Ga0182006_1000012 Ga0182006_100001211 440
17 3300025224 Ga0209784_100010 Ga0209784_100010250 440
18 3300025225 Ga0209566_100008 Ga0209566_100008250 440
19 3300025226 Ga0209674_100019 Ga0209674_100019250 440
20 3300025230 Ga0209563_100021 Ga0209563_100021250 440
21 3300025231 Ga0207427_100206 Ga0207427_10020614 440
22 3300025233 Ga0209437_100019 Ga0209437_100019250 440
23 3300025253 Ga0209677_100011 Ga0209677_100011250 440
24 3300025261 Ga0209233_1000025 Ga0209233_1000025250 440
25 3300025263 Ga0209565_1007354 Ga0209565_10073544 440
26 3300031911 Ga0307412_10000282 Ga0307412_1000028231 440
27 3300032002 Ga0307416_100000171 Ga0307416_1000001717 440
28 3300032004 Ga0307414_10103311 Ga0307414_101033112 440
29 3300046512 Ga0495610_0000009 Ga0495610_0000009_461263_462636 440
30 3300046519 Ga0495632_0004462 Ga0495632_0004462_315_1688 440
31 3300046558 Ga0495633_0004329 Ga0495633_0004329_2791_4164 440
32 3300046660 Ga0495625_0000310 Ga0495625_0000310_14410_15783 440
33 3300048925 Ga0496122_0017070 Ga0496122_0017070_4027_5400 440
34 3300037418 Ga0395900_0000841 Ga0395900_0000841_12776_14194 442
35 3300003322 rootL2_10006714 rootL2_1000671426 443
36 3300039447 Ga0436361_0113928 Ga0436361_0113928_13810_15201 448
37 3300006946 Ga0079104_1014814 Ga0079104_10148142 451
38 3300048903 Ga0496100_0054568 Ga0496100_0054568_28_1431 451
39 3300048924 Ga0496121_0019838 Ga0496121_0019838_1942_3300 451
40 3300048928 Ga0496125_0018421 Ga0496125_0018421_3589_4947 451
41 3300005539 Ga0068853_100093394 Ga0068853_1000933942 452
42 3300044712 Ga0453684_0000040 Ga0453684_0000040_388661_390130 452
43 3300048924 Ga0496121_0000169 Ga0496121_0000169_46359_47726 452
44 iso_pu_bacteria 2585428045 2587680415 452
45 iso_pu_bacteria 2585428187 2588234232 452
46 iso_pu_bacteria 2905999023 2906001250 452
47 iso_pu_bacteria 2919509842 2919511230 452
48 iso_pu_bacteria 2946019816 2946021087 452
49 3300046459 Ga0495629_0000600 Ga0495629_0000600_16912_18366 453
50 3300046472 Ga0495580_0004200 Ga0495580_0004200_9806_11260 453
51 3300046543 Ga0495645_0001084 Ga0495645_0001084_9460_10914 453
52 3300046559 Ga0495667_0036871 Ga0495667_0036871_1035_2489 453
53 3300046684 Ga0495669_0004605 Ga0495669_0004605_2204_3658 453
54 3300047315 Ga0495581_0027252 Ga0495581_0027252_400_1854 453
55 3300047323 Ga0495683_0004980 Ga0495683_0004980_2086_3579 453
56 3300048903 Ga0496100_0032904 Ga0496100_0032904_735_2189 453
57 3300048904 Ga0496101_0056891 Ga0496101_0056891_790_2244 453
58 3300048917 Ga0496114_0001750 Ga0496114_0001750_12079_13533 453
59 iso_pu_bacteria 2501025502 2501085965 453
60 iso_pu_bacteria 2510917013 2511088309 453
61 iso_pu_bacteria 2744054900 2746087109 453
62 iso_pu_bacteria 2744054901 2746096070 453
63 3300005841 Ga0068863_100187971 Ga0068863_1001879711 454
64 3300005843 Ga0068860_100008504 Ga0068860_1000085047 454
65 3300025925 Ga0207650_10002563 Ga0207650_1000256312 454
66 3300028381 Ga0268264_10028610 Ga0268264_100286103 454
67 3300006178 Ga0075367_10000290 Ga0075367_100002905 455
68 3300009093 Ga0105240_10108166 Ga0105240_101081663 455
69 3300009545 Ga0105237_10018258 Ga0105237_100182585 455
70 3300028666 Ga0265336_10000351 Ga0265336_1000035123 455
71 3300029957 Ga0265324_10000004 Ga0265324_10000004250 455
72 3300031241 Ga0265325_10000133 Ga0265325_1000013333 455
73 3300031711 Ga0265314_10079170 Ga0265314_100791702 455
74 3300044712 Ga0453684_0170446 Ga0453684_0170446_830_2251 455
75 3300046472 Ga0495580_0019683 Ga0495580_0019683_60_1511 455
76 3300050490 nmdc:mga03n38_7443_c1 nmdc:mga03n38_7443_c1_1407_2828 455
77 3300050494 nmdc:mga06z11_944_c1 nmdc:mga06z11_944_c1_1289_2710 455
78 iso_pu_bacteria 2916178963 2916179192 455
79 iso_pu_bacteria 2929520902 2929524160 455
80 3300005289 Ga0065704_10095133 Ga0065704_100951334 456
81 3300005327 Ga0070658_10066811 Ga0070658_100668111 456
82 3300005328 Ga0070676_10052975 Ga0070676_100529751 456
83 3300005331 Ga0070670_100000443 Ga0070670_10000044323 456
84 3300005331 Ga0070670_100001588 Ga0070670_1000015887 456
85 3300005331 Ga0070670_100098270 Ga0070670_1000982701 456
86 3300005354 Ga0070675_100012995 Ga0070675_1000129952 456
87 3300005364 Ga0070673_100003101 Ga0070673_1000031016 456
88 3300005456 Ga0070678_100005740 Ga0070678_1000057407 456
89 3300005456 Ga0070678_100008002 Ga0070678_1000080023 456
90 3300005456 Ga0070678_100147439 Ga0070678_1001474392 456
91 3300005458 Ga0070681_10116829 Ga0070681_101168291 456
92 3300005459 Ga0068867_100003256 Ga0068867_10000325610 456
93 3300005543 Ga0070672_100000249 Ga0070672_10000024919 456
94 3300005543 Ga0070672_100000488 Ga0070672_10000048811 456
95 3300005543 Ga0070672_100051642 Ga0070672_1000516422 456
96 3300005548 Ga0070665_100122187 Ga0070665_1001221872 456
97 3300005618 Ga0068864_100069043 Ga0068864_1000690431 456
98 3300005840 Ga0068870_10092480 Ga0068870_100924802 456
99 3300005937 Ga0081455_10064002 Ga0081455_100640022 456
100 3300006237 Ga0097621_100014909 Ga0097621_1000149092 456
101 3300006237 Ga0097621_100022583 Ga0097621_1000225833 456
102 3300006358 Ga0068871_100011778 Ga0068871_1000117783 456
103 3300006946 Ga0079104_1004543 Ga0079104_10045434 456
104 3300009148 Ga0105243_10000090 Ga0105243_1000009049 456
105 3300013308 Ga0157375_10012518 Ga0157375_100125184 456
106 3300013308 Ga0157375_10058161 Ga0157375_100581614 456
107 3300014969 Ga0157376_10003647 Ga0157376_100036472 456
108 3300015683 Ga0183362_10001 Ga0183362_10001427 456
109 3300021361 Ga0213872_10000351 Ga0213872_1000035135 456
110 3300021361 Ga0213872_10026770 Ga0213872_100267703 456
111 3300025315 Ga0207697_10007024 Ga0207697_100070243 456
112 3300025893 Ga0207682_10005251 Ga0207682_100052514 456
113 3300025907 Ga0207645_10068262 Ga0207645_100682622 456
114 3300025908 Ga0207643_10094908 Ga0207643_100949082 456
115 3300025926 Ga0207659_10002771 Ga0207659_1000277111 456
116 3300025931 Ga0207644_10012071 Ga0207644_100120715 456
117 3300025935 Ga0207709_10000376 Ga0207709_1000037639 456
118 3300025940 Ga0207691_10000049 Ga0207691_1000004961 456
119 3300025940 Ga0207691_10009013 Ga0207691_100090135 456
120 3300025940 Ga0207691_10023111 Ga0207691_100231113 456
121 3300025960 Ga0207651_10003094 Ga0207651_100030943 456
122 3300025986 Ga0207658_10128101 Ga0207658_101281012 456
123 3300026089 Ga0207648_10000701 Ga0207648_1000070125 456
124 3300026095 Ga0207676_10055764 Ga0207676_100557644 456
125 3300026121 Ga0207683_10000610 Ga0207683_1000061013 456
126 3300026121 Ga0207683_10017682 Ga0207683_100176823 456
127 3300026121 Ga0207683_10060021 Ga0207683_100600212 456
128 3300026121 Ga0207683_10256264 Ga0207683_102562641 456
129 3300031456 Ga0307513_10066244 Ga0307513_100662442 456
130 3300031548 Ga0307408_100001756 Ga0307408_10000175613 456
131 3300031911 Ga0307412_10007554 Ga0307412_100075543 456
132 3300032005 Ga0307411_10000418 Ga0307411_100004184 456
133 3300037068 Ga0373925_0025804 Ga0373925_0025804_208_1653 456
134 3300039447 Ga0436361_0238645 Ga0436361_0238645_1631_3049 456
135 3300039447 Ga0436361_0241662 Ga0436361_0241662_5541_7136 456
136 3300039447 Ga0436361_0906911 Ga0436361_0906911_2992_4455 456
137 3300039447 Ga0436361_0916159 Ga0436361_0916159_37198_38655 456
138 3300042876 Ga0451577_0000002 Ga0451577_0000002_1417742_1419208 456
139 3300044673 Ga0453683_0000013 Ga0453683_0000013_58299_59765 456
140 3300044712 Ga0453684_0000002 Ga0453684_0000002_312168_313634 456
141 3300044712 Ga0453684_0195190 Ga0453684_0195190_28_1503 456
142 3300045051 Ga0451576_0000037 Ga0451576_0000037_58540_60006 456
143 3300046472 Ga0495580_0011221 Ga0495580_0011221_2379_3860 456
144 3300046507 Ga0495606_0023796 Ga0495606_0023796_1568_3070 456
145 3300046525 Ga0495663_0010168 Ga0495663_0010168_195_1679 456
146 3300046526 Ga0495666_0004196 Ga0495666_0004196_2403_3884 456
147 3300046528 Ga0495642_0001642 Ga0495642_0001642_606_2063 456
148 3300046531 Ga0495665_0006421 Ga0495665_0006421_2508_3989 456
149 3300046542 Ga0495597_0002358 Ga0495597_0002358_5172_6674 456
150 3300046615 Ga0495656_0000042 Ga0495656_0000042_31930_33414 456
151 3300046660 Ga0495625_0002452 Ga0495625_0002452_2426_3928 456
152 3300046810 Ga0495660_0001620 Ga0495660_0001620_10539_12026 456
153 3300047317 Ga0495604_0011023 Ga0495604_0011023_3263_4744 456
154 3300047472 Ga0495686_0011655 Ga0495686_0011655_2408_3895 456
155 3300047673 Ga0495593_0038233 Ga0495593_0038233_331_1776 456
156 3300048912 Ga0496109_0043758 Ga0496109_0043758_388_1920 456
157 3300048925 Ga0496122_0000118 Ga0496122_0000118_155278_156651 456
158 3300048926 Ga0496123_0009854 Ga0496123_0009854_5680_7053 456
159 3300049573 Ga0501037_0034974 Ga0501037_0034974_146_1621 456
160 iso_pu_bacteria 2588254255 2590600701 456
161 iso_pu_bacteria 2738541300 2738841584 456
162 iso_pu_bacteria 2738543013 2739251574 456
163 iso_pu_bacteria 2738543018 2739272455 456
164 iso_pu_bacteria 2738543030 2739341499 456
165 iso_pu_bacteria 8006984368 8006987910 456
166 3300003322 rootL2_10017322 rootL2_100173222 457
167 3300003323 rootH1_10012210 rootH1_100122103 457
168 3300003323 rootH1_10094000 rootH1_100940001 457
169 3300003856 Ga0058692_1000063 Ga0058692_100006380 457
170 3300005289 Ga0065704_10000582 Ga0065704_100005825 457
171 3300005328 Ga0070676_10081334 Ga0070676_100813342 457
172 3300005347 Ga0070668_100007412 Ga0070668_1000074127 457
173 3300005347 Ga0070668_100013150 Ga0070668_1000131504 457
174 3300005353 Ga0070669_100011314 Ga0070669_1000113143 457
175 3300005439 Ga0070711_100028972 Ga0070711_1000289721 457
176 3300005455 Ga0070663_100022948 Ga0070663_1000229482 457
177 3300005543 Ga0070672_100095273 Ga0070672_1000952732 457
178 3300005544 Ga0070686_100041216 Ga0070686_1000412162 457
179 3300005718 Ga0068866_10036036 Ga0068866_100360362 457
180 3300006844 Ga0075428_100018052 Ga0075428_1000180522 457
181 3300009011 Ga0105251_10063499 Ga0105251_100634991 457
182 3300009036 Ga0105244_10002193 Ga0105244_100021937 457
183 3300009092 Ga0105250_10001288 Ga0105250_100012885 457
184 3300009094 Ga0111539_10002036 Ga0111539_1000203617 457
185 3300009094 Ga0111539_10193303 Ga0111539_101933032 457
186 3300009101 Ga0105247_10000251 Ga0105247_100002519 457
187 3300009148 Ga0105243_10000155 Ga0105243_1000015562 457
188 3300009148 Ga0105243_10016905 Ga0105243_100169053 457
189 3300009553 Ga0105249_10064600 Ga0105249_100646002 457
190 3300013104 Ga0157370_10039199 Ga0157370_100391992 457
191 3300013306 Ga0163162_10080762 Ga0163162_100807622 457
192 3300017792 Ga0163161_10000607 Ga0163161_1000060729 457
193 3300017792 Ga0163161_10002111 Ga0163161_100021113 457
194 3300025284 Ga0209130_1002062 Ga0209130_10020629 457
195 3300025291 Ga0209675_1001561 Ga0209675_100156113 457
196 3300025292 Ga0209676_1011210 Ga0209676_10112103 457
197 3300025303 Ga0209051_1003946 Ga0209051_10039465 457
198 3300025304 Ga0209257_1012478 Ga0209257_10124782 457
199 3300025711 Ga0207696_1001173 Ga0207696_10011735 457
200 3300025711 Ga0207696_1001447 Ga0207696_10014479 457
201 3300025728 Ga0207655_1000612 Ga0207655_100061227 457
202 3300025728 Ga0207655_1000947 Ga0207655_100094718 457
203 3300025735 Ga0207713_1001490 Ga0207713_10014901 457
204 3300025735 Ga0207713_1002830 Ga0207713_100283010 457
205 3300025735 Ga0207713_1003827 Ga0207713_10038271 457
206 3300025900 Ga0207710_10000009 Ga0207710_10000009257 457
207 3300025901 Ga0207688_10017874 Ga0207688_100178742 457
208 3300025907 Ga0207645_10018510 Ga0207645_100185102 457
209 3300025915 Ga0207693_10028211 Ga0207693_100282113 457
210 3300025916 Ga0207663_10062181 Ga0207663_100621812 457
211 3300025933 Ga0207706_10062366 Ga0207706_100623661 457
212 3300025935 Ga0207709_10000001 Ga0207709_100000011812 457
213 3300025935 Ga0207709_10013071 Ga0207709_100130712 457
214 3300025937 Ga0207669_10004384 Ga0207669_100043843 457
215 3300025938 Ga0207704_10038888 Ga0207704_100388882 457
216 3300025939 Ga0207665_10076840 Ga0207665_100768402 457
217 3300025940 Ga0207691_10040163 Ga0207691_100401632 457
218 3300025961 Ga0207712_10025627 Ga0207712_100256272 457
219 3300025972 Ga0207668_10003414 Ga0207668_100034141 457
220 3300025972 Ga0207668_10028234 Ga0207668_100282342 457
221 3300025986 Ga0207658_10019998 Ga0207658_100199982 457
222 3300026075 Ga0207708_10060837 Ga0207708_100608371 457
223 3300026089 Ga0207648_10146663 Ga0207648_101466632 457
224 3300026118 Ga0207675_100032164 Ga0207675_1000321642 457
225 3300026118 Ga0207675_100084904 Ga0207675_1000849042 457
226 3300026121 Ga0207683_10013576 Ga0207683_100135766 457
227 3300027312 Ga0209371_1000006 Ga0209371_1000006975 457
228 3300027907 Ga0207428_10084486 Ga0207428_100844862 457
229 3300030500 Ga0268256_1000007 Ga0268256_1000007975 457
230 3300042876 Ga0451577_0018620 Ga0451577_0018620_4279_5757 457
231 3300044673 Ga0453683_0004185 Ga0453683_0004185_4703_6181 457
232 3300044712 Ga0453684_0011888 Ga0453684_0011888_10549_12027 457
233 3300045051 Ga0451576_0005044 Ga0451576_0005044_4059_5537 457
234 3300046525 Ga0495663_0000061 Ga0495663_0000061_37937_39397 457
235 3300046557 Ga0495622_0058991 Ga0495622_0058991_76_1632 457
236 3300046674 Ga0495588_0009934 Ga0495588_0009934_1813_3267 457
237 3300046684 Ga0495669_0018835 Ga0495669_0018835_1063_2517 457
238 3300048909 Ga0496106_0082814 Ga0496106_0082814_318_1772 457
239 3300050511 nmdc:mga08y16_39931_c1 nmdc:mga08y16_39931_c1_226_1659 457
240 iso_pu_bacteria 2551306352 2552748093 457
241 iso_pu_bacteria 2551306416 2553006950 457
242 iso_pu_bacteria 2639762793 2640733496 457
243 iso_pu_bacteria 2675903507 2678230544 457
244 iso_pu_bacteria 2773857761 2774388918 457
245 iso_pu_bacteria 2773857770 2774439810 457
246 iso_pu_bacteria 2919182534 2919183446 457
247 iso_pu_bacteria 2919506607 2919507458 457
248 iso_pu_bacteria 2923510766 2923513689 457
249 3300002737 JGI25162J39368_1000005 JGI25162J39368_1000005115 459
250 3300010375 Ga0105239_10000038 Ga0105239_10000038108 459

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00171

Aldedh

Aldehyde dehydrogenase family

44

492

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
4l1o-assembly1.cif.gz_A crystal structure of human aldh3a1 with inhibitor 1-{[4-(1,3-benzodioxol-5-ylmethyl)piperazin-1-yl]methyl}-1h-indole-2,3-dione 0.97 2 446
8bb8-assembly1.cif.gz_A crystal structure of human aldehyde dehydrogenase aldh3a1 in complex with octanal 0.9688 2 446
1ad3-assembly1.cif.gz_B class 3 aldehyde dehydrogenase complex with nicotinamide-adenine-dinucleotide 0.9687 4 446
4l1o-assembly1.cif.gz_A crystal structure of human aldh3a1 with inhibitor 1-{[4-(1,3-benzodioxol-5-ylmethyl)piperazin-1-yl]methyl}-1h-indole-2,3-dione 0.9637 2 446
8bb8-assembly1.cif.gz_A crystal structure of human aldehyde dehydrogenase aldh3a1 in complex with octanal 0.9625 2 446
ID Description Score Start End Superfamily
af_Q2FWX9_214_408_3.40.309.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9875 215 407 3.40.309.10
af_A0A0P0Y7S8_7_101_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.9803 125 214 3.40.605.10
af_A0A0P0Y7S8_3_315_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.9787 123 422 3.40.605.10
af_A0A2R8PW97_5_423_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.9778 5 425 3.40.605.10
af_A0A2R8PW97_217_407_3.40.309.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9764 220 407 3.40.309.10
ID Description Score Start End GO Terms
AF-A0A2V5RW62-F1-model_v4 Aldehyde dehydrogenase family protein 0.9915 1 380 GO:0004029
GO:0005737
GO:0006081
AF-A0A7Z0LGZ6-F1-model_v4 Aldehyde dehydrogenase family protein 0.9844 180 322 GO:0004029
GO:0005737
GO:0006081
AF-A0A2V5RW62-F1-model_v4 Aldehyde dehydrogenase family protein 0.9838 1 380 GO:0004029
GO:0005737
GO:0006081
AF-A0A2H4Z9U6-F1-model_v4 Aldehyde dehydrogenase 3K1 0.9809 129 385 GO:0004029
GO:0005737
GO:0006081
AF-Q5IGR0-F1-model_v4 Aldehyde dehydrogenase family 3 member A2 (EC 1.2.1.3) (EC 1.2.1.94) (Fatty aldehyde dehydrogenase) 0.98 125 330 GO:0004028
GO:0004029
GO:0005789
GO:0006081
GO:0006631

Feature Viewer

pLDDT pTM Quality
94.89 0.91 High
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Predicted Structure (AlphaFold2)

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