F361686

General Info

Members Datasets Scaffolds Average Seq Length
250 164 250 273

Family's Representative Sequence

Representative Sequence 3300031727|Ga0316576_10000293|Ga0316576_1000029315
Length 245
Sequence MKIEGTIGFVGTGNMGEALIRGLLKVGVTEPSQIVGSDPRSDRAAELAETYGIRTTGDNVEVARQADILILAVKPQVMERVLEEIGAEIHAHALVISIAAGIPLAGHATEDDLEAAKRIFDSVGMTVALDEAQMDAVTGLSGSGPAYVFLVIEALADAGVKVGLSRHHAQALAAQTLLGSAKLLIETNEHPGRLKDMVTSPGGTAIAGLHTIEAGGLRTTLMDAVEAATKRSRELGEQAVKPEER

Samples

Sample ID Description Type Environment
1 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
2 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
17 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
18 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
19 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
20 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
23 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
24 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
25 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
26 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
29 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
30 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
31 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
32 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
33 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
34 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
37 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
40 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
41 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
42 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
44 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
45 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
46 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
47 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
48 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
49 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
51 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
53 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
54 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
55 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
56 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
57 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
58 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
59 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
60 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
61 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
62 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
63 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
64 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
92 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
95 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
96 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
97 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
98 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
99 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
100 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
101 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
102 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
103 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
104 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
105 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
106 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
107 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
108 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
109 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
110 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
111 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
112 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
113 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
114 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
115 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
116 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
117 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
118 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
119 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
120 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
121 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
122 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
123 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
124 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
125 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
126 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
127 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
128 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
129 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
130 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
131 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
132 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
133 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
134 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
137 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
138 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
139 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
140 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
141 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
142 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
144 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
145 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
146 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
147 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
148 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
149 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
150 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
151 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
152 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
153 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
154 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
155 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
156 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
157 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
158 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
159 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
160 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
161 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
162 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
163 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
164 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.8
Nodule 0
Rhizoplane 0.4
Rhizosphere 84.4
Stem 0
Stem Tuber 0
Unclassified 8.4

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065715_10107985 3300005293 Bacteria 2742
2 Ga0065707_10083731 3300005295 Bacteria 8357
3 Ga0070683_100148690 3300005329 Bacteria 2221
4 Ga0070690_100031827 3300005330 Bacteria 3289
5 Ga0068869_100213422 3300005334 Bacteria 1527
6 Ga0070680_100039649 3300005336 Bacteria 3810
7 Ga0070680_100056656 3300005336 Bacteria 3203
8 Ga0070682_100000033 3300005337 Bacteria 154740
9 Ga0068868_100006370 3300005338 Bacteria 8348
10 Ga0070689_100000833 3300005340 Bacteria 19089
11 Ga0070689_100098797 3300005340 Bacteria 2309
12 Ga0070689_100291651 3300005340 Bacteria 1356
13 Ga0070687_100098003 3300005343 Bacteria 1636
14 Ga0070687_100161373 3300005343 Bacteria 1325
15 Ga0070687_100320030 3300005343 Bacteria 991
16 Ga0070669_100302689 3300005353 Bacteria 1286
17 Ga0070675_100000004 3300005354 Bacteria 361974
18 Ga0070671_100571151 3300005355 Bacteria 976
19 Ga0070674_100304669 3300005356 Bacteria 1271
20 Ga0070673_100248693 3300005364 Bacteria 1549
21 Ga0070688_100070612 3300005365 Bacteria 2233
22 Ga0070688_100479348 3300005365 Bacteria 935
23 Ga0070713_100004254 3300005436 Bacteria 9572
24 Ga0070701_10003906 3300005438 Bacteria 5952
25 Ga0070694_100408194 3300005444 Bacteria 1065
26 Ga0070708_100114038 3300005445 Bacteria 2486
27 Ga0070708_100186021 3300005445 Bacteria 1942
28 Ga0070681_10155276 3300005458 Bacteria 2214
29 Ga0070681_10158700 3300005458 Bacteria 2186
30 Ga0068867_100133939 3300005459 Bacteria 1929
31 Ga0070685_10076348 3300005466 Bacteria 1998
32 Ga0070685_10252804 3300005466 Bacteria 1168
33 Ga0070706_100207661 3300005467 Bacteria 1829
34 Ga0070706_100270069 3300005467 Bacteria 1587
35 Ga0070706_100609999 3300005467 Bacteria 1014
36 Ga0070707_100007821 3300005468 Bacteria 9927
37 Ga0070707_100490417 3300005468 Bacteria 1190
38 Ga0070707_100668029 3300005468 Bacteria 1002
39 Ga0070698_100001901 3300005471 Bacteria 23269
40 Ga0070698_100094342 3300005471 Bacteria 2971
41 Ga0070679_100095417 3300005530 Bacteria 2962
42 Ga0070679_100097558 3300005530 Bacteria 2926
43 Ga0070679_100125570 3300005530 Bacteria 2548
44 Ga0070697_100000996 3300005536 Bacteria 21418
45 Ga0070672_100000069 3300005543 Bacteria 46569
46 Ga0070693_100012378 3300005547 Unclassified 4315
47 Ga0070693_100055666 3300005547 Bacteria 2280
48 Ga0070665_100137089 3300005548 Bacteria 2450
49 Ga0070704_100073529 3300005549 Bacteria 2490
50 Ga0068857_100008384 3300005577 Bacteria 8932
51 Ga0068856_100075639 3300005614 Bacteria 3335
52 Ga0068856_100185042 3300005614 Bacteria 2097
53 Ga0068864_100000007 3300005618 Bacteria 392187
54 Ga0068861_100041129 3300005719 Bacteria 3461
55 Ga0068861_100108184 3300005719 Bacteria 2224
56 Ga0068863_100078131 3300005841 Bacteria 3134
57 Ga0068858_100002729 3300005842 Bacteria 17768
58 Ga0068862_100649386 3300005844 Bacteria 1017
59 Ga0070717_10000552 3300006028 Bacteria 23739
60 Ga0070716_100028357 3300006173 Bacteria 3016
61 Ga0097621_100032675 3300006237 Unclassified 4139
62 Ga0075428_100058504 3300006844 Unclassified 4220
63 Ga0075431_100022658 3300006847 Bacteria 6421
64 Ga0075434_100049545 3300006871 Bacteria 4171
65 Ga0075434_100376811 3300006871 Bacteria 1440
66 Ga0075429_100086619 3300006880 Bacteria 2730
67 Ga0075429_100125620 3300006880 Bacteria 2243
68 Ga0075429_100309375 3300006880 Bacteria 1383
69 Ga0075436_100004833 3300006914 Bacteria 9264
70 Ga0075435_100000240 3300007076 Bacteria 33766
71 Ga0075435_100071645 3300007076 Unclassified 2830
72 Ga0075435_100113292 3300007076 Bacteria 2257
73 Ga0111539_10000004 3300009094 Bacteria 751278
74 Ga0111539_10154598 3300009094 Bacteria 2685
75 Ga0105245_10000008 3300009098 Bacteria 279925
76 Ga0105245_10000496 3300009098 Bacteria 36130
77 Ga0105245_10132176 3300009098 Bacteria 2342
78 Ga0105245_10292962 3300009098 Bacteria 1594
79 Ga0114129_10638356 3300009147 Bacteria 1375
80 Ga0105242_10000933 3300009176 Bacteria 22770
81 Ga0105249_10209285 3300009553 Bacteria 1913
82 Ga0157374_10263888 3300013296 Bacteria 1697
83 Ga0157378_10001092 3300013297 Bacteria 24799
84 Ga0157378_10002176 3300013297 Bacteria 17386
85 Ga0157378_10043135 3300013297 Bacteria 4005
86 Ga0157378_10083918 3300013297 Bacteria 2884
87 Ga0157378_10350696 3300013297 Bacteria 1441
88 Ga0157375_10000003 3300013308 Bacteria 476325
89 Ga0157375_10000008 3300013308 Bacteria 373560
90 Ga0157375_10006465 3300013308 Bacteria 10209
91 Ga0163163_10490247 3300014325 Bacteria 1290
92 Ga0157380_10036485 3300014326 Bacteria 3803
93 Ga0182008_10052008 3300014497 Bacteria 2031
94 Ga0157377_10000146 3300014745 Bacteria 44456
95 Ga0157377_10128317 3300014745 Bacteria 1545
96 Ga0157376_10400207 3300014969 Archaea 1328
97 Ga0213873_10000001 3300021358 Bacteria 1657979
98 Ga0213876_10000002 3300021384 Bacteria 1168769
99 Ga0207684_10000198 3300025910 Bacteria 95038
100 Ga0207684_10149291 3300025910 Bacteria 2011
101 Ga0207707_10258884 3300025912 Bacteria 1510
102 Ga0207660_10004998 3300025917 Bacteria 8646
103 Ga0207660_10141360 3300025917 Bacteria 1840
104 Ga0207660_10160216 3300025917 Bacteria 1735
105 Ga0207662_10115190 3300025918 Bacteria 1680
106 Ga0207662_10176354 3300025918 Bacteria 1373
107 Ga0207649_10244528 3300025920 Bacteria 1290
108 Ga0207652_10051595 3300025921 Bacteria 3527
109 Ga0207652_10155231 3300025921 Bacteria 2050
110 Ga0207652_10268952 3300025921 Bacteria 1537
111 Ga0207646_10017288 3300025922 Bacteria 6752
112 Ga0207646_10316248 3300025922 Bacteria 1411
113 Ga0207659_10000002 3300025926 Bacteria 619441
114 Ga0207687_10000620 3300025927 Bacteria 23962
115 Ga0207687_10003446 3300025927 Bacteria 10659
116 Ga0207700_10003447 3300025928 Bacteria 9201
117 Ga0207706_10536240 3300025933 Bacteria 1008
118 Ga0207686_10005146 3300025934 Bacteria 7030
119 Ga0207670_10037925 3300025936 Bacteria 3144
120 Ga0207670_10049614 3300025936 Bacteria 2809
121 Ga0207670_10067506 3300025936 Bacteria 2461
122 Ga0207670_10158766 3300025936 Bacteria 1686
123 Ga0207669_10117866 3300025937 Bacteria 1795
124 Ga0207691_10000349 3300025940 Bacteria 46575
125 Ga0207689_10031205 3300025942 Bacteria 4438
126 Ga0207689_10279690 3300025942 Bacteria 1382
127 Ga0207651_10219685 3300025960 Bacteria 1535
128 Ga0207712_10063564 3300025961 Bacteria 2628
129 Ga0207677_10000001 3300026023 Bacteria 534789
130 Ga0207677_10191578 3300026023 Bacteria 1618
131 Ga0207703_10000329 3300026035 Bacteria 51667
132 Ga0207703_10301884 3300026035 Bacteria 1461
133 Ga0207702_10269202 3300026078 Bacteria 1606
134 Ga0207641_10017401 3300026088 Bacteria 5885
135 Ga0207648_10178213 3300026089 Bacteria 1880
136 Ga0207648_10196197 3300026089 Bacteria 1790
137 Ga0207676_10000015 3300026095 Bacteria 329100
138 Ga0207674_10013876 3300026116 Bacteria 8913
139 Ga0207675_100122986 3300026118 Bacteria 2457
140 Ga0207675_100126466 3300026118 Bacteria 2421
141 Ga0207683_10001448 3300026121 Bacteria 21447
142 Ga0207683_10059095 3300026121 Bacteria 3367
143 Ga0207428_10000006 3300027907 Bacteria 491716
144 Ga0268266_10025334 3300028379 Bacteria 5045
145 Ga0268266_10363112 3300028379 Bacteria 1363
146 Ga0268264_10054273 3300028381 Bacteria 3346
147 Ga0265319_1041075 3300028563 Bacteria 1562
148 Ga0307515_10024151 3300028794 Bacteria 10608
149 Ga0265338_10023436 3300028800 Bacteria 6346
150 Ga0265338_10076708 3300028800 Bacteria 2829
151 Ga0265338_10323763 3300028800 Bacteria 1115
152 Ga0307511_10014300 3300030521 Bacteria 7727
153 Ga0265320_10061712 3300031240 Bacteria 1786
154 Ga0265325_10073075 3300031241 Bacteria 1717
155 Ga0265316_10319365 3300031344 Bacteria 1128
156 Ga0307513_10025384 3300031456 Bacteria 6867
157 Ga0307513_10284276 3300031456 Bacteria 1430
158 Ga0307509_10000065 3300031507 Bacteria 142674
159 Ga0307509_10005810 3300031507 Bacteria 16931
160 Ga0307509_10117766 3300031507 Bacteria 2642
161 Ga0307509_10124449 3300031507 Bacteria 2548
162 Ga0307509_10201327 3300031507 Bacteria 1828
163 Ga0307509_10352913 3300031507 Bacteria 1193
164 Ga0307508_10028453 3300031616 Bacteria 5051
165 Ga0265314_10059163 3300031711 Bacteria 2623
166 Ga0316576_10000293 3300031727 Bacteria 22015
167 Ga0316578_10323690 3300031728 Bacteria 920
168 Ga0307516_10027633 3300031730 Bacteria 5752
169 Ga0316577_10172714 3300031733 Bacteria 1220
170 Ga0307410_10230736 3300031852 Unclassified 1429
171 Ga0307416_100889742 3300032002 Bacteria 990
172 Ga0307415_100441745 3300032126 Bacteria 1122
173 Ga0307415_100698078 3300032126 Bacteria 915
174 Ga0373949_0001771 3300035090 Bacteria 5944
175 Ga0373932_0003117 3300035112 Bacteria 4036
176 Ga0373936_0000006 3300035113 Bacteria 318697
177 Ga0373936_0135905 3300035113 Bacteria 1059
178 Ga0373941_0021275 3300035115 Bacteria 1828
179 Ga0373954_0028188 3300035118 Bacteria 2581
180 Ga0373956_0118612 3300035119 Bacteria 1235
181 Ga0373943_0029540 3300035170 Bacteria 2590
182 Ga0373961_0000099 3300035241 Bacteria 46870
183 Ga0316574_0231936 3300035398 Bacteria 1181
184 Ga0316582_0064187 3300036647 Bacteria 2362
185 Ga0395901_0143631 3300038443 Bacteria 2508
186 Ga0436365_0581077 3300039437 Bacteria 1145
187 Ga0436365_0588372 3300039437 Bacteria 1310
188 Ga0436365_0659782 3300039437 Bacteria 1817
189 Ga0436365_1183419 3300039437 Bacteria 72863
190 Ga0436365_1350175 3300039437 Bacteria 4669
191 Ga0436363_0536131 3300039450 Bacteria 3276
192 Ga0436362_0842419 3300039453 Bacteria 317447
193 Ga0451853_0868085 3300041512 Bacteria 1622
194 Ga0451853_3028021 3300041512 Bacteria 17267
195 Ga0451577_0164884 3300042876 Bacteria 1996
196 Ga0451577_0399974 3300042876 Unclassified 1246
197 Ga0466972_0095052 3300044658 Bacteria 1412
198 Ga0451576_0037804 3300045051 Bacteria 5112
199 Ga0451576_0199144 3300045051 Bacteria 2092
200 Ga0451576_0424197 3300045051 Bacteria 1396
201 Ga0495651_0034286 3300046462 Bacteria 3957
202 Ga0495581_0335502 3300047315 Bacteria 883
203 Ga0495686_0040819 3300047472 Bacteria 2957
204 Ga0496108_0665193 3300048911 Bacteria 905
205 Ga0501047_0056897 3300049581 Bacteria 3782
206 Ga0501047_0470146 3300049581 Bacteria 1086
207 Ga0501048_0189185 3300049582 Bacteria 1459
208 Ga0501070_0043287 3300049586 Bacteria 3748
209 Ga0501070_0160534 3300049586 Bacteria 1853
210 Ga0501070_0303584 3300049586 Bacteria 1300
211 Ga0501073_0009148 3300049589 Bacteria 7307
212 Ga0501227_001714 3300049665 Bacteria 4866
213 Ga0501225_0015313 3300049705 Bacteria 2136
214 Ga0501079_0248653 3300049741 Bacteria 1390
215 Ga0501080_0008296 3300049742 Bacteria 9411
216 Ga0501035_0239663 3300049822 Bacteria 1543
217 Ga0501044_0036823 3300049823 Bacteria 5117
218 nmdc:mga09592_119994_c1 3300050508 Bacteria 2258
219 nmdc:mga09592_40729_c1 3300050508 Bacteria 3903
220 nmdc:mga09592_61534_c1 3300050508 Bacteria 3175
221 nmdc:mga06r32_2418_c1 3300050510 Bacteria 16704
222 nmdc:mga06r32_256529_c1 3300050510 Unclassified 1736
223 nmdc:mga08y16_5_c1 3300050511 Bacteria 751284
224 nmdc:mga08y16_627694_c1 3300050511 Bacteria 1081
225 nmdc:mga0n895_158514_c1 3300050512 Bacteria 2294
226 nmdc:mga0n895_50909_c1 3300050512 Bacteria 4062
227 nmdc:mga0rr50_190034_c1 3300050513 Bacteria 1682
228 nmdc:mga0rr50_434080_c1 3300050513 Bacteria 1112
229 nmdc:mga0rr50_4434_c1 3300050513 Bacteria 8255
230 nmdc:mga0rr50_44_c1 3300050513 Bacteria 75700
231 nmdc:mga0rr50_94309_c1 3300050513 Bacteria 2337
232 nmdc:mga08x19_1589_c1 3300050514 Bacteria 14092
233 Ga0500635_0005205 3300053080 Bacteria 3394
234 Ga0495655_0000641 3300053083 Bacteria 5692
235 Ga0500578_0019483 3300053086 Bacteria 4357
236 Ga0500646_0002548 3300053090 Bacteria 4731
237 Ga0500583_0007405 3300053092 Bacteria 3863
238 Ga0500566_0004858 3300053094 Bacteria 8003
239 Ga0500566_0009918 3300053094 Bacteria 5623
240 Ga0500566_0056541 3300053094 Bacteria 2231
241 Ga0500640_001811 3300053095 Bacteria 6736
242 Ga0500554_001367 3300053102 Bacteria 4721
243 Ga0500595_001163 3300053119 Bacteria 14573
244 Ga0500614_000605 3300053123 Bacteria 9158
245 Ga0500559_0020391 3300053136 Bacteria 2803
246 Ga0500568_0059495 3300053139 Bacteria 1482
247 Ga0500568_0092843 3300053139 Bacteria 1137
248 Ga0500603_002760 3300053150 Bacteria 3816
249 Ga0500616_0157287 3300053153 Bacteria 1045
250 Ga0500622_0070349 3300053156 Bacteria 1770

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300031727 Ga0316576_10000293 Ga0316576_1000029315 240
2 3300053153 Ga0500616_0157287 Ga0500616_0157287_167_1018 248
3 3300041512 Ga0451853_3028021 Ga0451853_3028021_2219_3055 251
4 3300005343 Ga0070687_100320030 Ga0070687_1003200301 252
5 3300005355 Ga0070671_100571151 Ga0070671_1005711511 252
6 3300005471 Ga0070698_100001901 Ga0070698_1000019017 253
7 3300025942 Ga0207689_10031205 Ga0207689_100312052 253
8 3300026023 Ga0207677_10191578 Ga0207677_101915782 253
9 3300035170 Ga0373943_0029540 Ga0373943_0029540_914_1738 254
10 3300028800 Ga0265338_10076708 Ga0265338_100767082 255
11 3300031456 Ga0307513_10284276 Ga0307513_102842762 255
12 3300025910 Ga0207684_10000198 Ga0207684_1000019873 256
13 3300005458 Ga0070681_10155276 Ga0070681_101552762 257
14 3300005466 Ga0070685_10076348 Ga0070685_100763481 257
15 3300005530 Ga0070679_100125570 Ga0070679_1001255701 257
16 3300005614 Ga0068856_100075639 Ga0068856_1000756392 257
17 3300005719 Ga0068861_100108184 Ga0068861_1001081843 257
18 3300025917 Ga0207660_10160216 Ga0207660_101602162 257
19 3300025918 Ga0207662_10115190 Ga0207662_101151903 257
20 3300025920 Ga0207649_10244528 Ga0207649_102445282 257
21 3300025921 Ga0207652_10051595 Ga0207652_100515954 257
22 3300025942 Ga0207689_10279690 Ga0207689_102796903 257
23 3300026118 Ga0207675_100126466 Ga0207675_1001264662 257
24 3300031456 Ga0307513_10025384 Ga0307513_100253847 257
25 3300031507 Ga0307509_10000065 Ga0307509_1000006515 257
26 3300031711 Ga0265314_10059163 Ga0265314_100591632 257
27 3300031730 Ga0307516_10027633 Ga0307516_100276337 257
28 3300049581 Ga0501047_0470146 Ga0501047_0470146_69_854 258
29 3300005438 Ga0070701_10003906 Ga0070701_100039064 259
30 3300006173 Ga0070716_100028357 Ga0070716_1000283573 259
31 3300006847 Ga0075431_100022658 Ga0075431_1000226584 259
32 3300007076 Ga0075435_100071645 Ga0075435_1000716452 259
33 3300025926 Ga0207659_10000002 Ga0207659_10000002275 259
34 3300050508 nmdc:mga09592_40729_c1 nmdc:mga09592_40729_c1_3003_3851 260
35 3300050513 nmdc:mga0rr50_434080_c1 nmdc:mga0rr50_434080_c1_68_910 260
36 3300005334 Ga0068869_100213422 Ga0068869_1002134222 262
37 3300009098 Ga0105245_10132176 Ga0105245_101321762 262
38 3300044658 Ga0466972_0095052 Ga0466972_0095052_59_964 262
39 3300031507 Ga0307509_10124449 Ga0307509_101244493 263
40 3300039437 Ga0436365_0581077 Ga0436365_0581077_15_878 265
41 3300005536 Ga0070697_100000996 Ga0070697_1000009967 267
42 3300005338 Ga0068868_100006370 Ga0068868_1000063709 269
43 3300013297 Ga0157378_10001092 Ga0157378_1000109216 269
44 3300013297 Ga0157378_10002176 Ga0157378_1000217612 269
45 3300013308 Ga0157375_10000008 Ga0157375_10000008220 269
46 3300021358 Ga0213873_10000001 Ga0213873_100000011174 269
47 3300021384 Ga0213876_10000002 Ga0213876_10000002366 269
48 3300026023 Ga0207677_10000001 Ga0207677_10000001146 269
49 3300031733 Ga0316577_10172714 Ga0316577_101727142 269
50 3300039437 Ga0436365_1183419 Ga0436365_1183419_3624_4442 269
51 3300039453 Ga0436362_0842419 Ga0436362_0842419_3203_4021 269
52 3300045051 Ga0451576_0199144 Ga0451576_0199144_555_1367 269
53 3300005340 Ga0070689_100000833 Ga0070689_10000083322 270
54 3300005364 Ga0070673_100248693 Ga0070673_1002486933 270
55 3300005436 Ga0070713_100004254 Ga0070713_1000042547 270
56 3300005468 Ga0070707_100007821 Ga0070707_1000078218 270
57 3300005543 Ga0070672_100000069 Ga0070672_10000006947 270
58 3300005547 Ga0070693_100012378 Ga0070693_1000123783 270
59 3300005547 Ga0070693_100055666 Ga0070693_1000556663 270
60 3300005842 Ga0068858_100002729 Ga0068858_10000272918 270
61 3300006028 Ga0070717_10000552 Ga0070717_1000055220 270
62 3300006237 Ga0097621_100032675 Ga0097621_1000326752 270
63 3300006880 Ga0075429_100309375 Ga0075429_1003093752 270
64 3300006914 Ga0075436_100004833 Ga0075436_1000048334 270
65 3300007076 Ga0075435_100000240 Ga0075435_10000024025 270
66 3300007076 Ga0075435_100113292 Ga0075435_1001132923 270
67 3300009098 Ga0105245_10000496 Ga0105245_1000049624 270
68 3300013297 Ga0157378_10083918 Ga0157378_100839183 270
69 3300013308 Ga0157375_10000003 Ga0157375_10000003111 270
70 3300014326 Ga0157380_10036485 Ga0157380_100364854 270
71 3300014745 Ga0157377_10128317 Ga0157377_101283172 270
72 3300025922 Ga0207646_10017288 Ga0207646_100172883 270
73 3300025927 Ga0207687_10003446 Ga0207687_100034462 270
74 3300025928 Ga0207700_10003447 Ga0207700_100034477 270
75 3300025936 Ga0207670_10037925 Ga0207670_100379253 270
76 3300025940 Ga0207691_10000349 Ga0207691_100003496 270
77 3300025960 Ga0207651_10219685 Ga0207651_102196853 270
78 3300026035 Ga0207703_10000329 Ga0207703_1000032913 270
79 3300028563 Ga0265319_1041075 Ga0265319_10410751 270
80 3300031240 Ga0265320_10061712 Ga0265320_100617122 270
81 3300031241 Ga0265325_10073075 Ga0265325_100730752 270
82 3300031344 Ga0265316_10319365 Ga0265316_103193652 270
83 3300035398 Ga0316574_0231936 Ga0316574_0231936_177_992 270
84 3300042876 Ga0451577_0399974 Ga0451577_0399974_68_883 270
85 3300049589 Ga0501073_0009148 Ga0501073_0009148_6229_7047 270
86 3300049742 Ga0501080_0008296 Ga0501080_0008296_8550_9368 270
87 3300050510 nmdc:mga06r32_2418_c1 nmdc:mga06r32_2418_c1_3445_4263 270
88 3300050510 nmdc:mga06r32_256529_c1 nmdc:mga06r32_256529_c1_89_907 270
89 3300050513 nmdc:mga0rr50_44_c1 nmdc:mga0rr50_44_c1_63663_64484 270
90 3300050513 nmdc:mga0rr50_94309_c1 nmdc:mga0rr50_94309_c1_789_1610 270
91 3300050514 nmdc:mga08x19_1589_c1 nmdc:mga08x19_1589_c1_11079_11900 270
92 3300053083 Ga0495655_0000641 Ga0495655_0000641_1189_2004 270
93 3300005295 Ga0065707_10083731 Ga0065707_100837312 271
94 3300005337 Ga0070682_100000033 Ga0070682_10000003333 271
95 3300005356 Ga0070674_100304669 Ga0070674_1003046693 271
96 3300005468 Ga0070707_100490417 Ga0070707_1004904172 271
97 3300006871 Ga0075434_100049545 Ga0075434_1000495454 271
98 3300006880 Ga0075429_100086619 Ga0075429_1000866193 271
99 3300009094 Ga0111539_10000004 Ga0111539_10000004123 271
100 3300009147 Ga0114129_10638356 Ga0114129_106383562 271
101 3300014969 Ga0157376_10400207 Ga0157376_104002072 271
102 3300025922 Ga0207646_10316248 Ga0207646_103162482 271
103 3300025933 Ga0207706_10536240 Ga0207706_105362401 271
104 3300025937 Ga0207669_10117866 Ga0207669_101178662 271
105 3300027907 Ga0207428_10000006 Ga0207428_10000006123 271
106 3300032126 Ga0307415_100698078 Ga0307415_1006980781 271
107 3300045051 Ga0451576_0037804 Ga0451576_0037804_2931_3755 271
108 3300050511 nmdc:mga08y16_5_c1 nmdc:mga08y16_5_c1_638829_639650 271
109 3300050512 nmdc:mga0n895_50909_c1 nmdc:mga0n895_50909_c1_1812_2633 271
110 3300005330 Ga0070690_100031827 Ga0070690_1000318273 272
111 3300005340 Ga0070689_100098797 Ga0070689_1000987973 272
112 3300005343 Ga0070687_100098003 Ga0070687_1000980033 272
113 3300005365 Ga0070688_100479348 Ga0070688_1004793481 272
114 3300005444 Ga0070694_100408194 Ga0070694_1004081942 272
115 3300005445 Ga0070708_100186021 Ga0070708_1001860212 272
116 3300005467 Ga0070706_100270069 Ga0070706_1002700693 272
117 3300005467 Ga0070706_100609999 Ga0070706_1006099991 272
118 3300005468 Ga0070707_100668029 Ga0070707_1006680291 272
119 3300005471 Ga0070698_100094342 Ga0070698_1000943423 272
120 3300005548 Ga0070665_100137089 Ga0070665_1001370892 272
121 3300005549 Ga0070704_100073529 Ga0070704_1000735292 272
122 3300005577 Ga0068857_100008384 Ga0068857_1000083848 272
123 3300005841 Ga0068863_100078131 Ga0068863_1000781314 272
124 3300005844 Ga0068862_100649386 Ga0068862_1006493862 272
125 3300006844 Ga0075428_100058504 Ga0075428_1000585043 272
126 3300006871 Ga0075434_100376811 Ga0075434_1003768112 272
127 3300009098 Ga0105245_10000008 Ga0105245_100000086 272
128 3300009098 Ga0105245_10292962 Ga0105245_102929622 272
129 3300009553 Ga0105249_10209285 Ga0105249_102092853 272
130 3300013296 Ga0157374_10263888 Ga0157374_102638882 272
131 3300013297 Ga0157378_10350696 Ga0157378_103506962 272
132 3300014497 Ga0182008_10052008 Ga0182008_100520082 272
133 3300014745 Ga0157377_10000146 Ga0157377_1000014619 272
134 3300025910 Ga0207684_10149291 Ga0207684_101492913 272
135 3300025927 Ga0207687_10000620 Ga0207687_100006206 272
136 3300025936 Ga0207670_10049614 Ga0207670_100496143 272
137 3300025936 Ga0207670_10067506 Ga0207670_100675062 272
138 3300025961 Ga0207712_10063564 Ga0207712_100635642 272
139 3300026035 Ga0207703_10301884 Ga0207703_103018842 272
140 3300026088 Ga0207641_10017401 Ga0207641_100174014 272
141 3300026089 Ga0207648_10196197 Ga0207648_101961972 272
142 3300026116 Ga0207674_10013876 Ga0207674_100138763 272
143 3300026121 Ga0207683_10001448 Ga0207683_1000144821 272
144 3300028379 Ga0268266_10025334 Ga0268266_100253341 272
145 3300028381 Ga0268264_10054273 Ga0268264_100542732 272
146 3300028794 Ga0307515_10024151 Ga0307515_100241515 272
147 3300028800 Ga0265338_10023436 Ga0265338_100234364 272
148 3300028800 Ga0265338_10323763 Ga0265338_103237631 272
149 3300031507 Ga0307509_10005810 Ga0307509_1000581012 272
150 3300031507 Ga0307509_10201327 Ga0307509_102013271 272
151 3300031507 Ga0307509_10352913 Ga0307509_103529132 272
152 3300031616 Ga0307508_10028453 Ga0307508_100284533 272
153 3300031728 Ga0316578_10323690 Ga0316578_103236901 272
154 3300035090 Ga0373949_0001771 Ga0373949_0001771_128_955 272
155 3300035112 Ga0373932_0003117 Ga0373932_0003117_1880_2704 272
156 3300035113 Ga0373936_0000006 Ga0373936_0000006_284210_285037 272
157 3300035113 Ga0373936_0135905 Ga0373936_0135905_136_963 272
158 3300035115 Ga0373941_0021275 Ga0373941_0021275_254_1081 272
159 3300035119 Ga0373956_0118612 Ga0373956_0118612_37_864 272
160 3300035241 Ga0373961_0000099 Ga0373961_0000099_26757_27584 272
161 3300036647 Ga0316582_0064187 Ga0316582_0064187_784_1620 272
162 3300038443 Ga0395901_0143631 Ga0395901_0143631_1631_2461 272
163 3300039437 Ga0436365_0659782 Ga0436365_0659782_807_1634 272
164 3300039450 Ga0436363_0536131 Ga0436363_0536131_2189_3016 272
165 3300042876 Ga0451577_0164884 Ga0451577_0164884_1124_1957 272
166 3300045051 Ga0451576_0424197 Ga0451576_0424197_382_1209 272
167 3300047315 Ga0495581_0335502 Ga0495581_0335502_44_871 272
168 3300047472 Ga0495686_0040819 Ga0495686_0040819_1163_1990 272
169 3300049581 Ga0501047_0056897 Ga0501047_0056897_430_1260 272
170 3300049582 Ga0501048_0189185 Ga0501048_0189185_97_927 272
171 3300049586 Ga0501070_0043287 Ga0501070_0043287_85_915 272
172 3300049586 Ga0501070_0160534 Ga0501070_0160534_789_1619 272
173 3300049586 Ga0501070_0303584 Ga0501070_0303584_123_953 272
174 3300049665 Ga0501227_001714 Ga0501227_001714_2657_3484 272
175 3300049705 Ga0501225_0015313 Ga0501225_0015313_34_861 272
176 3300049741 Ga0501079_0248653 Ga0501079_0248653_542_1372 272
177 3300049822 Ga0501035_0239663 Ga0501035_0239663_179_1009 272
178 3300049823 Ga0501044_0036823 Ga0501044_0036823_2297_3127 272
179 3300050508 nmdc:mga09592_61534_c1 nmdc:mga09592_61534_c1_1521_2348 272
180 3300050513 nmdc:mga0rr50_190034_c1 nmdc:mga0rr50_190034_c1_620_1447 272
181 3300050513 nmdc:mga0rr50_4434_c1 nmdc:mga0rr50_4434_c1_2589_3410 272
182 3300053080 Ga0500635_0005205 Ga0500635_0005205_1008_1835 272
183 3300053086 Ga0500578_0019483 Ga0500578_0019483_2783_3610 272
184 3300053090 Ga0500646_0002548 Ga0500646_0002548_2310_3137 272
185 3300053092 Ga0500583_0007405 Ga0500583_0007405_797_1624 272
186 3300053094 Ga0500566_0004858 Ga0500566_0004858_5406_6233 272
187 3300053094 Ga0500566_0009918 Ga0500566_0009918_1043_1870 272
188 3300053094 Ga0500566_0056541 Ga0500566_0056541_361_1194 272
189 3300053095 Ga0500640_001811 Ga0500640_001811_4816_5643 272
190 3300053102 Ga0500554_001367 Ga0500554_001367_2521_3348 272
191 3300053119 Ga0500595_001163 Ga0500595_001163_12375_13202 272
192 3300053123 Ga0500614_000605 Ga0500614_000605_1577_2404 272
193 3300053136 Ga0500559_0020391 Ga0500559_0020391_693_1520 272
194 3300053139 Ga0500568_0059495 Ga0500568_0059495_294_1139 272
195 3300053139 Ga0500568_0092843 Ga0500568_0092843_12_857 272
196 3300053150 Ga0500603_002760 Ga0500603_002760_364_1191 272
197 3300053156 Ga0500622_0070349 Ga0500622_0070349_491_1318 272
198 3300005329 Ga0070683_100148690 Ga0070683_1001486903 273
199 3300005336 Ga0070680_100056656 Ga0070680_1000566562 273
200 3300005340 Ga0070689_100291651 Ga0070689_1002916512 273
201 3300005343 Ga0070687_100161373 Ga0070687_1001613731 273
202 3300005353 Ga0070669_100302689 Ga0070669_1003026892 273
203 3300005354 Ga0070675_100000004 Ga0070675_100000004196 273
204 3300005445 Ga0070708_100114038 Ga0070708_1001140382 273
205 3300005458 Ga0070681_10158700 Ga0070681_101587002 273
206 3300005459 Ga0068867_100133939 Ga0068867_1001339392 273
207 3300005467 Ga0070706_100207661 Ga0070706_1002076613 273
208 3300005530 Ga0070679_100095417 Ga0070679_1000954173 273
209 3300005530 Ga0070679_100097558 Ga0070679_1000975583 273
210 3300005614 Ga0068856_100185042 Ga0068856_1001850422 273
211 3300005618 Ga0068864_100000007 Ga0068864_100000007272 273
212 3300006880 Ga0075429_100125620 Ga0075429_1001256202 273
213 3300009094 Ga0111539_10154598 Ga0111539_101545983 273
214 3300013297 Ga0157378_10043135 Ga0157378_100431352 273
215 3300013308 Ga0157375_10006465 Ga0157375_100064659 273
216 3300014325 Ga0163163_10490247 Ga0163163_104902472 273
217 3300025912 Ga0207707_10258884 Ga0207707_102588842 273
218 3300025917 Ga0207660_10141360 Ga0207660_101413601 273
219 3300025918 Ga0207662_10176354 Ga0207662_101763541 273
220 3300025921 Ga0207652_10155231 Ga0207652_101552313 273
221 3300025921 Ga0207652_10268952 Ga0207652_102689522 273
222 3300025936 Ga0207670_10158766 Ga0207670_101587662 273
223 3300026078 Ga0207702_10269202 Ga0207702_102692022 273
224 3300026089 Ga0207648_10178213 Ga0207648_101782132 273
225 3300026095 Ga0207676_10000015 Ga0207676_1000001557 273
226 3300026121 Ga0207683_10059095 Ga0207683_100590955 273
227 3300028379 Ga0268266_10363112 Ga0268266_103631121 273
228 3300030521 Ga0307511_10014300 Ga0307511_100143002 273
229 3300031507 Ga0307509_10117766 Ga0307509_101177662 273
230 3300031852 Ga0307410_10230736 Ga0307410_102307363 273
231 3300032002 Ga0307416_100889742 Ga0307416_1008897421 273
232 3300032126 Ga0307415_100441745 Ga0307415_1004417452 273
233 3300039437 Ga0436365_0588372 Ga0436365_0588372_465_1295 273
234 3300039437 Ga0436365_1350175 Ga0436365_1350175_2435_3268 273
235 3300041512 Ga0451853_0868085 Ga0451853_0868085_126_956 273
236 3300046462 Ga0495651_0034286 Ga0495651_0034286_2204_3043 273
237 3300048911 Ga0496108_0665193 Ga0496108_0665193_37_876 273
238 3300050508 nmdc:mga09592_119994_c1 nmdc:mga09592_119994_c1_1134_1970 273
239 3300050511 nmdc:mga08y16_627694_c1 nmdc:mga08y16_627694_c1_106_942 273
240 3300005293 Ga0065715_10107985 Ga0065715_101079851 274
241 3300005336 Ga0070680_100039649 Ga0070680_1000396492 274
242 3300005365 Ga0070688_100070612 Ga0070688_1000706122 274
243 3300005466 Ga0070685_10252804 Ga0070685_102528041 274
244 3300005719 Ga0068861_100041129 Ga0068861_1000411294 274
245 3300009176 Ga0105242_10000933 Ga0105242_1000093322 274
246 3300025917 Ga0207660_10004998 Ga0207660_100049989 274
247 3300025934 Ga0207686_10005146 Ga0207686_100051465 274
248 3300026118 Ga0207675_100122986 Ga0207675_1001229863 274
249 3300035118 Ga0373954_0028188 Ga0373954_0028188_43_909 274
250 3300050512 nmdc:mga0n895_158514_c1 nmdc:mga0n895_158514_c1_1364_2206 274

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03807

F420_oxidored

NADP oxidoreductase coenzyme F420-dependent

6

101

0.99

PF14748

P5CR_dimer

Pyrroline-5-carboxylate reductase dimerisation

131

235

0.99

PF03446

NAD_binding_2

NAD binding domain of 6-phosphogluconate dehydrogenase

6

136

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
5bse-assembly1.cif.gz_A crystal structure of medicago truncatula (delta)1-pyrroline-5-carboxylate reductase (mtp5cr) 0.9425 1 268
5bsh-assembly1.cif.gz_G crystal structure of medicago truncatula (delta)1-pyrroline-5-carboxylate reductase (mtp5cr) in complex with l-proline 0.9384 3 268
6lhm-assembly2.cif.gz_B structure of human pycr2 0.9382 9 270
5uau-assembly1.cif.gz_C structure of human pycr-1 complexed with proline 0.9378 6 274
8dkg-assembly1.cif.gz_B structure of pycr1 thr171met variant complexed with nadh 0.9373 4 274
ID Description Score Start End Superfamily
2graB02 Mainly Alpha;Orthogonal Bundle;ProC C-terminal domain-like fold;ProC C-terminal domain-like 0.9719 171 274 1.10.3730.10
af_P0A9L8_1_164_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9697 6 165 3.40.50.720
5uaxC02 Mainly Alpha;Orthogonal Bundle;ProC C-terminal domain-like fold;ProC C-terminal domain-like 0.9686 171 268 1.10.3730.10
5bshB02 Mainly Alpha;Orthogonal Bundle;ProC C-terminal domain-like fold;ProC C-terminal domain-like 0.968 171 268 1.10.3730.10
5bsfC02 Mainly Alpha;Orthogonal Bundle;ProC C-terminal domain-like fold;ProC C-terminal domain-like 0.9678 171 268 1.10.3730.10
ID Description Score Start End GO Terms
AF-A0A7X1L7M7-F1-model_v4 Pyrroline-5-carboxylate reductase (P5C reductase) (P5CR) (EC 1.5.1.2) (PCA reductase) 0.9808 4 270 GO:0004735
GO:0005737
GO:0055129
AF-A0A2V7Y130-F1-model_v4 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) 0.9802 89 273 GO:0004735
GO:0055129
AF-A0A3B8MHY0-F1-model_v4 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) 0.9798 119 270 GO:0004735
GO:0055129
AF-A0A2G6FM40-F1-model_v4 Pyrroline-5-carboxylate reductase (P5C reductase) (P5CR) (EC 1.5.1.2) (PCA reductase) 0.9789 6 270 GO:0004735
GO:0005737
GO:0055129
AF-A0A1B1AQ57-F1-model_v4 Pyrroline-5-carboxylate reductase (P5C reductase) (P5CR) (EC 1.5.1.2) (PCA reductase) 0.9787 6 271 GO:0004735
GO:0005737
GO:0055129

Feature Viewer

pLDDT pTM Quality
94.51 0.89 High
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Predicted Structure (AlphaFold2)

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