F361185

General Info

Members Datasets Scaffolds Average Seq Length
249 171 193 434

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2747842501|2748015843
Length 485
Sequence KANPPVIEVQARPGQPLGMPVERFLRTYWHKHPLLIRNAFADFASPLQPEDLAGLACEDGVLARLISHDRATDGWSVRTGPFQETDFPGLPDHDWTLLVQDVDKWDADVRALLEQFRFLPRWRIDDIMISFAATGGSVGAHVDHYDVFLLQGQGHRRWQIDARTSQGRKPTPLAFRDDVDIKLLREFKPTHDWVLGPGDMLYLPPLVPHHGVAEDACLTFSIGTRAPSSAELIGDYLDTLIADADESVRYHDEDLKVPADPYEIDVTAMNRVVEALNALRMNDPDRLGDWFGRFMTTYRASGDVVPAPEPIPREAVEQALEEGVVLYRHPWSRLAWRRAKRGATLFCSGLEFALSAKDAARLAAAEEIDGGLYTQLSARGREVVLELLAQGHYQRAHDDAHEDIDDDQAHVLTVSADHDDTQDDADSADADDAIDTDADVEAVADDADSPADIADIADTAQNGDGSTDASDIGEDGNNDETPERA

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2524614729 Arenimonas oryziterrae YC6267, DSM 21050 Isolate Rhizosphere
3 2547132130 Stenotrophomonas maltophilia RR-10 Isolate Unclassified
4 2571042365 Lysobacter oryzae DSM 21044 Isolate Rhizosphere
5 2576861471 Stenotrophomonas rhizophila DSM 14405 Isolate Rhizosphere
6 2643221559 Lysobacter sp. Root559 Isolate Unclassified
7 2643221573 Lysobacter sp. Root604 Isolate Unclassified
8 2643221579 Pseudoxanthomonas sp. Root630 Isolate Unclassified
9 2643221581 Pseudoxanthomonas sp. Root65 Isolate Unclassified
10 2643221586 Lysobacter sp. Root667 Isolate Unclassified
11 2643221593 Lysobacter sp. Root690 Isolate Unclassified
12 2643221612 Lysobacter sp. Root76 Isolate Unclassified
13 2643221695 Lysobacter sp. Root494 Isolate Unclassified
14 2643221720 Lysobacter sp. Root916 Isolate Unclassified
15 2643221727 Lysobacter sp. Root96 Isolate Unclassified
16 2643221728 Lysobacter sp. Root983 Isolate Unclassified
17 2747842428 Stenotrophomonas sp. WCS2014-113 Isolate Unclassified
18 2747842501 Xanthomonas sp. WCS2014-23 Isolate Unclassified
19 2765235840 Stenotrophomonas maltophilia AA1 Isolate Unclassified
20 2816332141 Stenotrophomonas muris 1190 (v2) (version 2) Isolate Unclassified
21 2818991457 Xanthomonas translucens 569 Isolate Unclassified
22 2842391507 Stenotrophomonas maltophilia SEMIA 4027 Isolate Nodule
23 2842757796 Stenotrophomonas sp. R-72406 Isolate Unclassified
24 2842780639 Pseudoxanthomonas sp. R-71986 Isolate Unclassified
25 2852649853 Stenotrophomonas sp. JAI102 Isolate Rhizosphere
26 2852684882 Xanthomonas sp. JAI131 Isolate Rhizosphere
27 2857442823 Stenotrophomonas sp. R-74235 Isolate Unclassified
28 2874220319 Stenotrophomonas maltophilia PS5 Isolate Unclassified
29 2895498888 Pseudoxanthomonas sp. SGD-10 Isolate Rhizosphere
30 2895511927 Pseudoxanthomonas sp. SGD-5-1 Isolate Rhizosphere
31 2895522137 Pseudoxanthomonas sp. SGNA-20 Isolate Rhizosphere
32 2895525241 Pseudoxanthomonas sp. SGT-18 Isolate Rhizosphere
33 2919089067 Stenotrophomonas sp. 1337 Isolate Rhizosphere
34 2919130084 Xanthomonas sp. 1678 Isolate Rhizosphere
35 2919134579 Stenotrophomonas geniculata 1733 Isolate Rhizosphere
36 2919513703 Luteimonas sp. 3794 Isolate Unclassified
37 2919675420 Luteimonas terrae 4099 Isolate Unclassified
38 2923516293 Pseudoxanthomonas mexicana SLBN-89 Isolate Rhizosphere
39 2928496128 Stenotrophomonas indicatrix 1163 Isolate Unclassified
40 2929195423 Xanthomonas sp. R-73098 Hybrid assembly Isolate Unclassified
41 2931380184 Stenotrophomonas sp. DR822 Isolate Rhizosphere
42 2937610967 Stenotrophomonas maltophilia EP20 Isolate Unclassified
43 2939589442 Stenotrophomonas rhizophila 716 Isolate Rhizosphere
44 2939622612 Stenotrophomonas sp. 2619 Isolate Rhizosphere
45 2939626828 Stenotrophomonas sp. 2694 Isolate Rhizosphere
46 2941475908 Stenotrophomonas rhizophila 2680 Isolate Rhizosphere
47 2941489479 Lysobacter enzymogenes 2943 Isolate Rhizosphere
48 2961047084 Stenotrophomonas maltophilia EP5 Isolate Unclassified
49 2961064222 Stenotrophomonas maltophilia EP13 Isolate Unclassified
50 2974307012 Stenotrophomonas sp. SORGH_AS_0282 Isolate Unclassified
51 2977247770 Stenotrophomonas rhizophila SORGH_AS 457 Isolate Unclassified
52 2984514374 Stenotrophomonas sp. SORGH_AS282 Isolate Aerial Root
53 2987605356 Stenotrophomonas sp. ATCM1_4 Isolate Unclassified
54 2995948881 Lysobacter enzymogenes B25 Isolate Unclassified
55 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
56 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
57 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
58 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
59 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
60 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
61 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
62 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
63 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
64 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
65 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
66 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
67 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
68 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
69 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
70 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
71 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
72 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
73 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
74 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
75 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
76 3300009979 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_126 metaG Metagenome Rhizosphere
77 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
78 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
79 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
80 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
81 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
82 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
83 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
84 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
85 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
86 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
87 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
88 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
89 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
90 3300015689 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A02 Metagenome Rhizosphere
91 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
92 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
93 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
94 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
95 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
96 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
97 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
98 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
99 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
100 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
101 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
102 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
103 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
104 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
105 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
113 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
114 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
115 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
116 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
117 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
118 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
119 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
120 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
121 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
122 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
123 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
124 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
125 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
126 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
127 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
128 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
129 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
130 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
131 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
132 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
133 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
134 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
135 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
136 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
137 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
138 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
139 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
140 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
141 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
142 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
143 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
144 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
145 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
146 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
147 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
148 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
149 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
150 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
151 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
152 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
153 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
154 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
155 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
156 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
157 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
158 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
159 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
160 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
161 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
167 3300049772 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E11_B_4_control Metagenome Rhizosphere
168 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
169 8021622325 Xanthomonas sp. LMG12462 Isolate Rhizosphere
170 8021626552 Xanthomonas sp. LMG12460 Isolate Rhizosphere
171 8021648035 Xanthomonas sp. LMG 12461 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 77.51
Metatranscriptomes 0
Isolates 22.49

Biome Distribution

Category Percentage (%)
Aerial Root 0.4
Bulb 0
Endosphere 18.88
Nodule 0.4
Rhizoplane 2.01
Rhizosphere 49.4
Stem 0
Stem Tuber 0
Unclassified 28.92

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_3380488 2162886007 Bacteria 3846
2 JGI25152J39213_1001040 3300002773 Bacteria 13211
3 JGI25150J39212_1000642 3300002774 Bacteria 13174
4 JGI25151J46595_10000148 3300003187 Bacteria 92040
5 JGI25151J46595_10000380 3300003187 Bacteria 46059
6 JGI25153J46596_10000240 3300003215 Bacteria 46059
7 rootH2_10015170 3300003320 Bacteria 4635
8 Ga0055526_1000032 3300003771 Bacteria 143118
9 Ga0055526_1002301 3300003771 Bacteria 13033
10 Ga0055537_1000308 3300003773 Bacteria 33643
11 Ga0055537_1000377 3300003773 Bacteria 30013
12 Ga0055524_1000054 3300003775 Bacteria 143118
13 Ga0055534_1000026 3300003784 Bacteria 130908
14 Ga0055534_1000041 3300003784 Bacteria 101875
15 Ga0055528_1000021 3300003790 Bacteria 143118
16 Ga0055528_1000494 3300003790 Bacteria 31131
17 Ga0055530_10002619 3300003791 Bacteria 11319
18 Ga0055530_10003076 3300003791 Bacteria 9919
19 Ga0058692_1000012 3300003856 Bacteria 318930
20 Ga0058692_1000023 3300003856 Bacteria 237263
21 Ga0065704_10000437 3300005289 Bacteria 43348
22 Ga0070670_100003140 3300005331 Bacteria 13666
23 Ga0070669_100021947 3300005353 Bacteria 4565
24 Ga0081539_10047959 3300005985 Bacteria 2434
25 Ga0075364_10000341 3300006051 Bacteria 23187
26 Ga0075364_10099937 3300006051 Bacteria 1931
27 Ga0105251_10000485 3300009011 Bacteria 37583
28 Ga0105251_10010163 3300009011 Bacteria 5485
29 Ga0105240_10061631 3300009093 Bacteria 4674
30 Ga0105243_10161504 3300009148 Bacteria 1932
31 Ga0105237_10115594 3300009545 Bacteria 2676
32 Ga0105032_100475 3300009979 Bacteria 4005
33 Ga0105239_10347045 3300010375 Bacteria 1676
34 Ga0157371_10000985 3300013102 Bacteria 31537
35 Ga0157371_10064152 3300013102 Bacteria 2603
36 Ga0157370_10056643 3300013104 Bacteria 3731
37 Ga0157370_10076504 3300013104 Bacteria 3153
38 Ga0157369_10082316 3300013105 Bacteria 3444
39 Ga0157374_10016419 3300013296 Bacteria 6507
40 Ga0163162_10000003 3300013306 Bacteria 698280
41 Ga0157372_10238516 3300013307 Bacteria 2109
42 Ga0157375_10018562 3300013308 Bacteria 6309
43 Ga0157375_10166044 3300013308 Bacteria 2352
44 Ga0182008_10002184 3300014497 Bacteria 12428
45 Ga0182008_10030291 3300014497 Bacteria 2728
46 Ga0157379_10055457 3300014968 Bacteria 3541
47 Ga0182006_1014693 3300015261 Bacteria 3371
48 Ga0182006_1037723 3300015261 Bacteria 1914
49 Ga0182007_10000277 3300015262 Bacteria 34005
50 Ga0182005_1000237 3300015265 Bacteria 35530
51 Ga0182005_1000947 3300015265 Bacteria 12660
52 Ga0183360_10001 3300015689 Bacteria 3943671
53 Ga0163161_10024316 3300017792 Bacteria 4279
54 Ga0163161_10039154 3300017792 Bacteria 3402
55 Ga0207425_1000092 3300025245 Bacteria 87673
56 Ga0209129_1000151 3300025258 Bacteria 113221
57 Ga0209565_1000001 3300025263 Bacteria 2950419
58 Ga0209565_1000022 3300025263 Bacteria 390888
59 Ga0209673_1000001 3300025273 Bacteria 3176258
60 Ga0209673_1000110 3300025273 Bacteria 181173
61 Ga0209675_1000001 3300025291 Bacteria 2950293
62 Ga0209675_1000060 3300025291 Bacteria 184316
63 Ga0209676_1000086 3300025292 Bacteria 264155
64 Ga0209676_1000114 3300025292 Bacteria 207416
65 Ga0209676_1000758 3300025292 Bacteria 43603
66 Ga0209025_1000005 3300025294 Bacteria 1272149
67 Ga0209025_1000012 3300025294 Bacteria 924362
68 Ga0209564_1000001 3300025295 Bacteria 3176258
69 Ga0209564_1000302 3300025295 Bacteria 97770
70 Ga0209758_1000018 3300025297 Bacteria 753320
71 Ga0209050_1000566 3300025298 Bacteria 60184
72 Ga0209050_1002092 3300025298 Bacteria 18293
73 Ga0209050_1014192 3300025298 Bacteria 3458
74 Ga0209256_1000002 3300025299 Bacteria 1906740
75 Ga0209256_1003437 3300025299 Bacteria 11124
76 Ga0209051_1004401 3300025303 Bacteria 8710
77 Ga0209257_1000014 3300025304 Bacteria 946850
78 Ga0209257_1017964 3300025304 Bacteria 2751
79 Ga0209257_1020732 3300025304 Bacteria 2414
80 Ga0209257_1032322 3300025304 Bacteria 1661
81 Ga0207713_1000550 3300025735 Bacteria 37475
82 Ga0207695_10074936 3300025913 Bacteria 3444
83 Ga0207681_10002908 3300025923 Bacteria 10824
84 Ga0207650_10002385 3300025925 Bacteria 13083
85 Ga0207650_10047805 3300025925 Bacteria 3154
86 Ga0207644_10160035 3300025931 Bacteria 1749
87 Ga0207709_10001626 3300025935 Bacteria 15285
88 Ga0207709_10097988 3300025935 Bacteria 1932
89 Ga0207691_10006149 3300025940 Bacteria 11607
90 Ga0209371_1000007 3300027312 Bacteria 1050654
91 Ga0209371_1000059 3300027312 Bacteria 237154
92 Ga0209999_1008933 3300027543 Bacteria 1812
93 Ga0209974_10001564 3300027876 Bacteria 8313
94 Ga0268256_1000008 3300030500 Bacteria 1050654
95 Ga0268256_1000055 3300030500 Bacteria 237299
96 Ga0316177_1081454 3300030731 Bacteria 3338
97 Ga0307406_10004542 3300031901 Bacteria 7563
98 Ga0307412_10045736 3300031911 Bacteria 2863
99 Ga0307412_10055494 3300031911 Bacteria 2635
100 Ga0307412_10236099 3300031911 Bacteria 1411
101 Ga0307409_100175081 3300031995 Bacteria 1893
102 Ga0307414_10038419 3300032004 Bacteria 3215
103 Ga0307414_10086692 3300032004 Bacteria 2311
104 Ga0307414_10162182 3300032004 Bacteria 1777
105 Ga0307414_10166459 3300032004 Bacteria 1757
106 Ga0395899_0009248 3300037312 Bacteria 7566
107 Ga0395900_0009098 3300037418 Bacteria 10178
108 Ga0395900_0118652 3300037418 Bacteria 2715
109 Ga0395898_0110961 3300037466 Bacteria 2629
110 Ga0395905_0001851 3300037471 Bacteria 24380
111 Ga0395905_0019919 3300037471 Bacteria 6357
112 Ga0395905_0059326 3300037471 Bacteria 3577
113 Ga0395905_0094329 3300037471 Bacteria 2807
114 Ga0395905_0147173 3300037471 Bacteria 2216
115 Ga0395901_0014623 3300038443 Bacteria 7975
116 Ga0237819_00886 3300038705 Bacteria 9342
117 Ga0237819_02114 3300038705 Bacteria 4286
118 Ga0439436_0008746 3300041404 Bacteria 3110
119 Ga0439436_0010942 3300041404 Bacteria 2761
120 Ga0439439_0003720 3300041406 Bacteria 3385
121 Ga0439439_0015414 3300041406 Bacteria 1867
122 Ga0451793_0312175 3300041452 Bacteria 1307
123 Ga0451837_1313272 3300041494 Bacteria 3008
124 Ga0439449_0000015 3300042007 Bacteria 49208
125 Ga0439449_0002426 3300042007 Bacteria 7281
126 Ga0439457_009741 3300042014 Bacteria 2227
127 Ga0439462_0015465 3300042015 Bacteria 1967
128 Ga0450911_004151 3300042115 Bacteria 2414
129 Ga0451577_0010641 3300042876 Bacteria 8766
130 Ga0495638_0015984 3300046460 Bacteria 5029
131 Ga0495638_0038671 3300046460 Bacteria 3030
132 Ga0495607_0018492 3300046501 Bacteria 4443
133 Ga0495606_0054048 3300046507 Bacteria 2602
134 Ga0495610_0005476 3300046512 Bacteria 9011
135 Ga0495631_0015405 3300046518 Bacteria 3664
136 Ga0495643_0001155 3300046522 Bacteria 25858
137 Ga0495663_0024468 3300046525 Bacteria 1755
138 Ga0495621_0000622 3300046539 Bacteria 8921
139 Ga0495621_0006576 3300046539 Bacteria 3401
140 Ga0495636_0003915 3300047318 Bacteria 5811
141 Ga0495672_0000455 3300047320 Bacteria 48439
142 Ga0496100_0137528 3300048903 Bacteria 1728
143 Ga0496102_0408931 3300048905 Bacteria 1275
144 Ga0496112_0078604 3300048915 Bacteria 3262
145 Ga0496114_0015791 3300048917 Bacteria 6076
146 Ga0496116_0001836 3300048919 Bacteria 22941
147 Ga0496116_0107570 3300048919 Bacteria 1648
148 Ga0496117_0001326 3300048920 Bacteria 36388
149 Ga0496117_0003100 3300048920 Bacteria 19896
150 Ga0496117_0037833 3300048920 Bacteria 3588
151 Ga0496118_0010150 3300048921 Bacteria 9357
152 Ga0496118_0014379 3300048921 Bacteria 7415
153 Ga0496118_0021930 3300048921 Bacteria 5601
154 Ga0496118_0076672 3300048921 Bacteria 2375
155 Ga0496119_0000984 3300048922 Bacteria 36651
156 Ga0496119_0016020 3300048922 Bacteria 5729
157 Ga0496120_0000535 3300048923 Bacteria 58503
158 Ga0496120_0001796 3300048923 Bacteria 24080
159 Ga0496121_0016603 3300048924 Bacteria 7588
160 Ga0496121_0083281 3300048924 Bacteria 2525
161 Ga0496122_0001711 3300048925 Bacteria 34031
162 Ga0496122_0002999 3300048925 Bacteria 22970
163 Ga0496122_0053436 3300048925 Bacteria 3045
164 Ga0496122_0062993 3300048925 Bacteria 2710
165 Ga0496123_0000619 3300048926 Bacteria 59624
166 Ga0496123_0000624 3300048926 Bacteria 59382
167 Ga0496124_0000880 3300048927 Bacteria 48881
168 Ga0496124_0002178 3300048927 Bacteria 26162
169 Ga0496124_0007248 3300048927 Bacteria 11832
170 Ga0496124_0010385 3300048927 Bacteria 9436
171 Ga0496124_0015754 3300048927 Bacteria 7226
172 Ga0496124_0040756 3300048927 Bacteria 4014
173 Ga0496124_0040860 3300048927 Bacteria 4007
174 Ga0496125_0001033 3300048928 Bacteria 43136
175 Ga0496125_0022684 3300048928 Bacteria 5821
176 Ga0496125_0038813 3300048928 Bacteria 4112
177 Ga0496125_0054980 3300048928 Bacteria 3248
178 Ga0496125_0094586 3300048928 Bacteria 2225
179 Ga0496126_0020637 3300048929 Bacteria 6453
180 Ga0496126_0028080 3300048929 Bacteria 5365
181 Ga0496126_0030095 3300048929 Bacteria 5150
182 Ga0501032_0025084 3300049569 Bacteria 4111
183 Ga0501033_0041207 3300049570 Bacteria 3446
184 Ga0501034_0000083 3300049571 Bacteria 169656
185 Ga0501034_0042960 3300049571 Bacteria 4575
186 Ga0501034_0044020 3300049571 Bacteria 4515
187 Ga0501039_0078266 3300049575 Bacteria 2572
188 Ga0501043_0165836 3300049579 Bacteria 1725
189 Ga0501070_0027472 3300049586 Bacteria 4774
190 Ga0501275_000357 3300049772 Bacteria 5224
191 nmdc:mga00v17_110101_c1 3300050491 Bacteria 1747
192 nmdc:mga00v17_32958_c1 3300050491 Bacteria 3066
193 nmdc:mga00v17_542_c2 3300050491 Bacteria 5789

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300031911 Ga0307412_10055494 Ga0307412_100554943 322
2 3300048903 Ga0496100_0137528 Ga0496100_0137528_70_1221 367
3 3300009545 Ga0105237_10115594 Ga0105237_101155942 374
4 3300013296 Ga0157374_10016419 Ga0157374_100164193 374
5 3300010375 Ga0105239_10347045 Ga0105239_103470452 381
6 3300013308 Ga0157375_10018562 Ga0157375_100185622 383
7 3300013306 Ga0163162_10000003 Ga0163162_10000003374 385
8 iso_pu_bacteria 2524614729 2525556826 386
9 3300042007 Ga0439449_0000015 Ga0439449_0000015_26365_27540 390
10 3300009093 Ga0105240_10061631 Ga0105240_100616313 392
11 3300025913 Ga0207695_10074936 Ga0207695_100749363 392
12 3300031901 Ga0307406_10004542 Ga0307406_100045425 393
13 3300042014 Ga0439457_009741 Ga0439457_009741_625_1818 394
14 3300032004 Ga0307414_10086692 Ga0307414_100866922 395
15 3300046460 Ga0495638_0038671 Ga0495638_0038671_390_1580 395
16 iso_pu_bacteria 2995948881 2995951515 395
17 3300047318 Ga0495636_0003915 Ga0495636_0003915_232_1518 396
18 iso_pu_bacteria 2747842428 2747950938 396
19 3300027543 Ga0209999_1008933 Ga0209999_10089332 397
20 3300027876 Ga0209974_10001564 Ga0209974_100015646 397
21 iso_pu_bacteria 2919675420 2919678999 397
22 3300009979 Ga0105032_100475 Ga0105032_1004752 398
23 3300014968 Ga0157379_10055457 Ga0157379_100554572 398
24 3300030731 Ga0316177_1081454 Ga0316177_10814542 398
25 3300049569 Ga0501032_0025084 Ga0501032_0025084_232_1440 398
26 3300049570 Ga0501033_0041207 Ga0501033_0041207_108_1316 398
27 3300049571 Ga0501034_0044020 Ga0501034_0044020_468_1676 398
28 3300049575 Ga0501039_0078266 Ga0501039_0078266_588_1796 398
29 3300049579 Ga0501043_0165836 Ga0501043_0165836_208_1416 398
30 3300049586 Ga0501070_0027472 Ga0501070_0027472_632_1840 398
31 iso_pu_bacteria 2571042365 2572255070 398
32 iso_pu_bacteria 2643221559 2643817653 398
33 iso_pu_bacteria 2643221586 2643940364 398
34 iso_pu_bacteria 2643221593 2643976642 398
35 iso_pu_bacteria 2643221612 2644079438 398
36 iso_pu_bacteria 2643221695 2644529457 398
37 iso_pu_bacteria 2643221727 2644694880 398
38 iso_pu_bacteria 2818991457 2819663002 398
39 iso_pu_bacteria 2852684882 2852686007 398
40 iso_pu_bacteria 2919130084 2919133545 398
41 iso_pu_bacteria 2919513703 2919514940 398
42 iso_pu_bacteria 2929195423 2929197401 398
43 3300005353 Ga0070669_100021947 Ga0070669_1000219473 399
44 3300013308 Ga0157375_10166044 Ga0157375_101660442 399
45 3300025923 Ga0207681_10002908 Ga0207681_100029083 399
46 3300025940 Ga0207691_10006149 Ga0207691_100061495 399
47 3300031995 Ga0307409_100175081 Ga0307409_1001750811 399
48 3300041406 Ga0439439_0015414 Ga0439439_0015414_516_1817 399
49 iso_pu_bacteria 2547132130 2547501163 399
50 iso_pu_bacteria 2576861471 2578457836 399
51 iso_pu_bacteria 2643221573 2643878875 399
52 iso_pu_bacteria 2643221720 2644660191 399
53 iso_pu_bacteria 2643221728 2644697493 399
54 iso_pu_bacteria 2747842501 2748015843 399
55 iso_pu_bacteria 2765235840 2765579656 399
56 iso_pu_bacteria 2816332141 2816517738 399
57 iso_pu_bacteria 2842391507 2842391918 399
58 iso_pu_bacteria 2842780639 2842783817 399
59 iso_pu_bacteria 2852649853 2852650274 399
60 iso_pu_bacteria 2857442823 2857446720 399
61 iso_pu_bacteria 2874220319 2874222350 399
62 iso_pu_bacteria 2919089067 2919090284 399
63 iso_pu_bacteria 2919134579 2919138561 399
64 iso_pu_bacteria 2928496128 2928497675 399
65 iso_pu_bacteria 2931380184 2931384194 399
66 iso_pu_bacteria 2937610967 2937614642 399
67 iso_pu_bacteria 2939589442 2939592898 399
68 iso_pu_bacteria 2939622612 2939626762 399
69 iso_pu_bacteria 2939626828 2939630988 399
70 iso_pu_bacteria 2941475908 2941476421 399
71 iso_pu_bacteria 2961047084 2961049115 399
72 iso_pu_bacteria 2961064222 2961066187 399
73 iso_pu_bacteria 2974307012 2974308437 399
74 iso_pu_bacteria 2977247770 2977249193 399
75 iso_pu_bacteria 2984514374 2984516353 399
76 3300002773 JGI25152J39213_1001040 JGI25152J39213_10010406 400
77 3300002774 JGI25150J39212_1000642 JGI25150J39212_10006424 400
78 3300003187 JGI25151J46595_10000380 JGI25151J46595_100003806 400
79 3300003215 JGI25153J46596_10000240 JGI25153J46596_100002406 400
80 3300003856 Ga0058692_1000023 Ga0058692_1000023193 400
81 3300009148 Ga0105243_10161504 Ga0105243_101615042 400
82 3300015265 Ga0182005_1000947 Ga0182005_10009477 400
83 3300025245 Ga0207425_1000092 Ga0207425_10000924 400
84 3300025258 Ga0209129_1000151 Ga0209129_1000151102 400
85 3300025294 Ga0209025_1000012 Ga0209025_1000012221 400
86 3300025297 Ga0209758_1000018 Ga0209758_1000018437 400
87 3300025935 Ga0207709_10001626 Ga0207709_100016262 400
88 3300025935 Ga0207709_10097988 Ga0207709_100979881 400
89 3300027312 Ga0209371_1000059 Ga0209371_1000059192 400
90 3300030500 Ga0268256_1000055 Ga0268256_10000557 400
91 3300038705 Ga0237819_00886 Ga0237819_00886_4236_5606 400
92 3300041452 Ga0451793_0312175 Ga0451793_0312175_41_1279 400
93 3300048927 Ga0496124_0015754 Ga0496124_0015754_5033_6466 400
94 3300048927 Ga0496124_0040860 Ga0496124_0040860_1477_2892 400
95 3300048928 Ga0496125_0094586 Ga0496125_0094586_265_1680 400
96 3300048929 Ga0496126_0030095 Ga0496126_0030095_2547_3785 400
97 iso_pu_bacteria 2842757796 2842760129 400
98 iso_pu_bacteria 2987605356 2987607303 400
99 iso_pu_bacteria 8021622325 8021623744 400
100 iso_pu_bacteria 8021626552 8021630440 400
101 iso_pu_bacteria 8021648035 8021651572 400
102 3300006051 Ga0075364_10099937 Ga0075364_100999372 401
103 3300013307 Ga0157372_10238516 Ga0157372_102385162 401
104 3300037471 Ga0395905_0147173 Ga0395905_0147173_767_1975 401
105 3300050491 nmdc:mga00v17_110101_c1 nmdc:mga00v17_110101_c1_317_1528 401
106 3300050491 nmdc:mga00v17_32958_c1 nmdc:mga00v17_32958_c1_200_1420 401
107 iso_pu_bacteria 2941489479 2941490527 401
108 3300003187 JGI25151J46595_10000148 JGI25151J46595_1000014871 402
109 3300003771 Ga0055526_1000032 Ga0055526_100003245 402
110 3300003773 Ga0055537_1000308 Ga0055537_100030830 402
111 3300003775 Ga0055524_1000054 Ga0055524_100005445 402
112 3300003784 Ga0055534_1000041 Ga0055534_100004170 402
113 3300003790 Ga0055528_1000021 Ga0055528_100002170 402
114 3300003791 Ga0055530_10002619 Ga0055530_100026193 402
115 3300003791 Ga0055530_10003076 Ga0055530_100030768 402
116 3300003856 Ga0058692_1000012 Ga0058692_1000012188 402
117 3300015689 Ga0183360_10001 Ga0183360_100011689 402
118 3300025263 Ga0209565_1000001 Ga0209565_10000012124 402
119 3300025273 Ga0209673_1000001 Ga0209673_10000012124 402
120 3300025291 Ga0209675_1000001 Ga0209675_1000001408 402
121 3300025292 Ga0209676_1000758 Ga0209676_100075820 402
122 3300025294 Ga0209025_1000005 Ga0209025_1000005581 402
123 3300025295 Ga0209564_1000001 Ga0209564_1000001570 402
124 3300025298 Ga0209050_1000566 Ga0209050_100056625 402
125 3300025298 Ga0209050_1002092 Ga0209050_10020923 402
126 3300025299 Ga0209256_1000002 Ga0209256_1000002982 402
127 3300025303 Ga0209051_1004401 Ga0209051_10044013 402
128 3300025304 Ga0209257_1000014 Ga0209257_100001430 402
129 3300025304 Ga0209257_1017964 Ga0209257_10179642 402
130 3300027312 Ga0209371_1000007 Ga0209371_1000007202 402
131 3300030500 Ga0268256_1000008 Ga0268256_1000008748 402
132 3300041404 Ga0439436_0008746 Ga0439436_0008746_1418_2647 402
133 3300041404 Ga0439436_0010942 Ga0439436_0010942_955_2202 402
134 3300041406 Ga0439439_0003720 Ga0439439_0003720_269_1525 402
135 3300042007 Ga0439449_0002426 Ga0439449_0002426_4043_5314 402
136 3300042015 Ga0439462_0015465 Ga0439462_0015465_298_1527 402
137 3300046501 Ga0495607_0018492 Ga0495607_0018492_2450_3688 402
138 3300046507 Ga0495606_0054048 Ga0495606_0054048_762_2000 402
139 3300046522 Ga0495643_0001155 Ga0495643_0001155_1333_2766 402
140 3300046539 Ga0495621_0006576 Ga0495621_0006576_1260_2531 402
141 3300047320 Ga0495672_0000455 Ga0495672_0000455_45411_46844 402
142 3300048905 Ga0496102_0408931 Ga0496102_0408931_10_1230 402
143 iso_pu_bacteria 2923516293 2923518548 402
144 3300003320 rootH2_10015170 rootH2_100151702 403
145 3300003771 Ga0055526_1002301 Ga0055526_10023016 403
146 3300003773 Ga0055537_1000377 Ga0055537_10003772 403
147 3300003784 Ga0055534_1000026 Ga0055534_1000026115 403
148 3300003790 Ga0055528_1000494 Ga0055528_100049424 403
149 3300005331 Ga0070670_100003140 Ga0070670_1000031405 403
150 3300005985 Ga0081539_10047959 Ga0081539_100479592 403
151 3300009011 Ga0105251_10000485 Ga0105251_100004859 403
152 3300009011 Ga0105251_10010163 Ga0105251_100101633 403
153 3300013102 Ga0157371_10000985 Ga0157371_1000098525 403
154 3300013102 Ga0157371_10064152 Ga0157371_100641521 403
155 3300013104 Ga0157370_10056643 Ga0157370_100566431 403
156 3300013104 Ga0157370_10076504 Ga0157370_100765042 403
157 3300013105 Ga0157369_10082316 Ga0157369_100823162 403
158 3300014497 Ga0182008_10002184 Ga0182008_1000218410 403
159 3300014497 Ga0182008_10030291 Ga0182008_100302912 403
160 3300015261 Ga0182006_1014693 Ga0182006_10146932 403
161 3300015261 Ga0182006_1037723 Ga0182006_10377232 403
162 3300015262 Ga0182007_10000277 Ga0182007_100002773 403
163 3300015265 Ga0182005_1000237 Ga0182005_10002373 403
164 3300017792 Ga0163161_10024316 Ga0163161_100243162 403
165 3300017792 Ga0163161_10039154 Ga0163161_100391542 403
166 3300025263 Ga0209565_1000022 Ga0209565_100002288 403
167 3300025273 Ga0209673_1000110 Ga0209673_1000110168 403
168 3300025291 Ga0209675_1000060 Ga0209675_100006046 403
169 3300025292 Ga0209676_1000114 Ga0209676_10001143 403
170 3300025295 Ga0209564_1000302 Ga0209564_100030215 403
171 3300025298 Ga0209050_1014192 Ga0209050_10141921 403
172 3300025299 Ga0209256_1003437 Ga0209256_100343710 403
173 3300025304 Ga0209257_1020732 Ga0209257_10207321 403
174 3300025304 Ga0209257_1032322 Ga0209257_10323221 403
175 3300025735 Ga0207713_1000550 Ga0207713_10005509 403
176 3300025925 Ga0207650_10002385 Ga0207650_100023856 403
177 3300031911 Ga0307412_10045736 Ga0307412_100457362 403
178 3300038705 Ga0237819_02114 Ga0237819_02114_655_2070 403
179 3300041494 Ga0451837_1313272 Ga0451837_1313272_1648_2877 403
180 3300042115 Ga0450911_004151 Ga0450911_004151_772_2169 403
181 3300042876 Ga0451577_0010641 Ga0451577_0010641_3513_4763 403
182 3300046460 Ga0495638_0015984 Ga0495638_0015984_1910_3337 403
183 3300046512 Ga0495610_0005476 Ga0495610_0005476_2543_3958 403
184 3300046518 Ga0495631_0015405 Ga0495631_0015405_1327_2742 403
185 3300046525 Ga0495663_0024468 Ga0495663_0024468_310_1731 403
186 3300048919 Ga0496116_0001836 Ga0496116_0001836_1108_2505 403
187 3300048919 Ga0496116_0107570 Ga0496116_0107570_113_1546 403
188 3300048920 Ga0496117_0001326 Ga0496117_0001326_32032_33465 403
189 3300048920 Ga0496117_0003100 Ga0496117_0003100_1549_2793 403
190 3300048920 Ga0496117_0037833 Ga0496117_0037833_759_2162 403
191 3300048921 Ga0496118_0010150 Ga0496118_0010150_2416_3852 403
192 3300048921 Ga0496118_0014379 Ga0496118_0014379_2016_3449 403
193 3300048921 Ga0496118_0021930 Ga0496118_0021930_2560_3804 403
194 3300048921 Ga0496118_0076672 Ga0496118_0076672_735_2132 403
195 3300048922 Ga0496119_0000984 Ga0496119_0000984_2204_3607 403
196 3300048922 Ga0496119_0016020 Ga0496119_0016020_1897_3141 403
197 3300048923 Ga0496120_0000535 Ga0496120_0000535_24054_25457 403
198 3300048923 Ga0496120_0001796 Ga0496120_0001796_2277_3521 403
199 3300048924 Ga0496121_0016603 Ga0496121_0016603_1736_3169 403
200 3300048924 Ga0496121_0083281 Ga0496121_0083281_87_1484 403
201 3300048925 Ga0496122_0001711 Ga0496122_0001711_1561_2964 403
202 3300048925 Ga0496122_0002999 Ga0496122_0002999_2011_3255 403
203 3300048925 Ga0496122_0053436 Ga0496122_0053436_1493_2926 403
204 3300048925 Ga0496122_0062993 Ga0496122_0062993_233_1630 403
205 3300048926 Ga0496123_0000619 Ga0496123_0000619_2049_3293 403
206 3300048927 Ga0496124_0000880 Ga0496124_0000880_35407_36639 403
207 3300048927 Ga0496124_0002178 Ga0496124_0002178_22947_24191 403
208 3300048927 Ga0496124_0007248 Ga0496124_0007248_8164_9597 403
209 3300048927 Ga0496124_0010385 Ga0496124_0010385_6280_7695 403
210 3300048927 Ga0496124_0040756 Ga0496124_0040756_1168_2571 403
211 3300048928 Ga0496125_0001033 Ga0496125_0001033_37496_38899 403
212 3300048928 Ga0496125_0022684 Ga0496125_0022684_1810_3213 403
213 3300048928 Ga0496125_0038813 Ga0496125_0038813_1519_2952 403
214 3300048928 Ga0496125_0054980 Ga0496125_0054980_752_2155 403
215 3300048929 Ga0496126_0020637 Ga0496126_0020637_587_1990 403
216 iso_pu_bacteria 2643221579 2643907869 403
217 iso_pu_bacteria 2643221581 2643915920 403
218 3300006051 Ga0075364_10000341 Ga0075364_100003418 404
219 3300025925 Ga0207650_10047805 Ga0207650_100478052 404
220 3300037471 Ga0395905_0059326 Ga0395905_0059326_1334_2551 404
221 3300037471 Ga0395905_0094329 Ga0395905_0094329_1514_2731 404
222 3300046539 Ga0495621_0000622 Ga0495621_0000622_4400_5617 404
223 3300048926 Ga0496123_0000624 Ga0496123_0000624_53385_54860 404
224 3300049571 Ga0501034_0042960 Ga0501034_0042960_1355_2779 404
225 3300049772 Ga0501275_000357 Ga0501275_000357_2900_4153 404
226 3300050491 nmdc:mga00v17_542_c2 nmdc:mga00v17_542_c2_2234_3523 404
227 3300031911 Ga0307412_10236099 Ga0307412_102360991 405
228 3300032004 Ga0307414_10162182 Ga0307414_101621822 405
229 3300025931 Ga0207644_10160035 Ga0207644_101600352 407
230 3300032004 Ga0307414_10166459 Ga0307414_101664592 407
231 3300037312 Ga0395899_0009248 Ga0395899_0009248_4327_5565 407
232 3300037418 Ga0395900_0009098 Ga0395900_0009098_4202_5440 407
233 3300037418 Ga0395900_0118652 Ga0395900_0118652_735_1973 407
234 3300037466 Ga0395898_0110961 Ga0395898_0110961_1015_2253 407
235 3300037471 Ga0395905_0001851 Ga0395905_0001851_4823_6061 407
236 3300037471 Ga0395905_0019919 Ga0395905_0019919_2105_3343 407
237 3300038443 Ga0395901_0014623 Ga0395901_0014623_4934_6172 407
238 3300048915 Ga0496112_0078604 Ga0496112_0078604_1980_3215 407
239 3300048917 Ga0496114_0015791 Ga0496114_0015791_3229_4479 407
240 3300048929 Ga0496126_0028080 Ga0496126_0028080_2385_3635 407
241 3300049571 Ga0501034_0000083 Ga0501034_0000083_147187_148467 413
242 3300025292 Ga0209676_1000086 Ga0209676_100008691 414
243 iso_pu_bacteria 2895498888 2895500745 415
244 iso_pu_bacteria 2895511927 2895516385 415
245 iso_pu_bacteria 2895522137 2895523696 415
246 iso_pu_bacteria 2895525241 2895526723 415
247 2162886007 SwRhRL2b_contig_3380488 SwRhRL2b_0865.00009640 418
248 3300005289 Ga0065704_10000437 Ga0065704_100004374 418
249 3300032004 Ga0307414_10038419 Ga0307414_100384191 418

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF20514

ROXA-like_wH

ROXA-like winged helix

278

394

0.97

PF08007

JmjC_2

JmjC domain

111

232

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
3nw4-assembly1.cif.gz_A crystal structure of salicylate 1,2-dioxygenase g106a mutant from pseudoaminobacter salicylatoxidans in complex with gentisate 0.9405 144 241
2phd-assembly1.cif.gz_C crystal structure determination of a salicylate 1,2-dioxygenase from pseudaminobacter salicylatoxidans 0.9399 144 241
3nl1-assembly1.cif.gz_A crystal structure of salicylate 1,2-dioxygenase from pseudoaminobacter salicylatoxidans adducts with gentisate 0.9396 144 241
2phd-assembly1.cif.gz_A crystal structure determination of a salicylate 1,2-dioxygenase from pseudaminobacter salicylatoxidans 0.9389 144 241
4fag-assembly1.cif.gz_A crystal structure of the salicylate 1,2-dioxygenase from pseudoaminobacter salicylatoxidans w104y mutant in complex with gentisate 0.9389 144 241
ID Description Score Start End Superfamily
4cugB01 Mainly Beta;Sandwich;Jelly Rolls;Cupin 0.9637 36 244 2.60.120.650
4nubA01 Mainly Beta;Sandwich;Jelly Rolls;Cupin 0.9408 37 244 2.60.120.650
4cugB01 Mainly Beta;Sandwich;Jelly Rolls;Cupin 0.9237 36 244 2.60.120.650
3fjsA00 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9233 145 244 2.60.120.10
af_O06194_5_109_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9194 141 244 2.60.120.10
ID Description Score Start End GO Terms
AF-A0A127T5Y3-F1-model_v4 Cupin superfamily protein 1 39 163
AF-A0A127T534-F1-model_v4 Cupin superfamily protein 0.9966 80 179
AF-A0A2W6H284-F1-model_v4 deleted 0.9916 335 418
AF-A0A2W6TEV9-F1-model_v4 Cupin domain-containing protein 0.9899 22 157
AF-A0A127T534-F1-model_v4 Cupin superfamily protein 0.9771 80 179

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Predicted Structure (AlphaFold2)

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