F361169
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 249 | 173 | 498 | 586 |
Family's Representative Sequence
| Representative Sequence | iso_pu_bacteria|2571042365|2572255427 |
| Length | 662 |
| Sequence | STAAAGRPAATAADEFLGHPKGVYVCFFTEMWERFSFYGMKALLLLYLLQHHKFGDRAGLDVLGAYGGLVYCVPVIGGLLADRFLGMRKAVIFGGLLLVAGHAGMAVEGHAATVVNGVVVRDEGALRVFYLSLSLIIMGVGFLKPNVSTIVGQLYPENDPRRDSGFSLFVAGINLGALFASIVCGYLGQTLGWRYGFGAAGIGMLLGLAQFIWGRKYLRGIGEPPAPLPRSREWMIYGGAVLGLLPVAWLMHAVTSIQLGADVVRWTYWIVVMALAGIVWSMWHSWRRRDAAAPLRDYAPSLLAFALVGLGVIWLSARYGVVDFFIAESTLALVLMSVVFLAVGFWYVGFVTRGCTRVEAQRMGAMMVLIFAALVFYTLYEQTYGSWVTFTDRLLTKDVAPSLVQAQPTIRWSADWLRNLQLFLASAPWSTYSLLLGPVSFVIAASVSDRNPASSLPRLLFGTTVVAMLVALLRDAVVLPQTAGSLTYLGALFIVLLAPLFAVVWAWLDRRGLDPSKPTKSALGLLFGGLSFLPLVWAAQHAGSTGELASVWWLVLAYLLLELGEMCLYPVGLSAVTQLSVPRVMSLMMGTWFLATAFSETLAALFGKLAAIEVPEGETMNVAEAAAKYADLFNFLMWLGVGCAIAALLASPLLRRMMHGVK |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300003371 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM | Metagenome | Rhizosphere |
| 2 | 3300003771 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 | Metagenome | Endosphere |
| 3 | 3300003773 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 | Metagenome | Endosphere |
| 4 | 3300003775 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 | Metagenome | Endosphere |
| 5 | 3300003781 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 | Metagenome | Endosphere |
| 6 | 3300003784 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 | Metagenome | Endosphere |
| 7 | 3300003790 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 | Metagenome | Endosphere |
| 8 | 3300003791 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 | Metagenome | Endosphere |
| 9 | 3300003794 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 | Metagenome | Endosphere |
| 10 | 3300003856 | Agave microbial communities from Guanajuato, Mexico - At.Am.rz | Metagenome | Rhizosphere |
| 11 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 12 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 13 | 3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Metagenome | Rhizosphere |
| 14 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 17 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 18 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 22 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 23 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 24 | 3300009036 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG | Metagenome | Rhizosphere |
| 25 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 26 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 27 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 28 | 3300009979 | Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_126 metaG | Metagenome | Rhizosphere |
| 29 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 30 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 31 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 32 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 33 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 34 | 3300014497 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG | Metagenome | Rhizosphere |
| 35 | 3300015262 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG | Metagenome | Rhizosphere |
| 36 | 3300015265 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG | Metagenome | Rhizosphere |
| 37 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 38 | 3300021361 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 | Metagenome | Rhizosphere |
| 39 | 3300025263 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 40 | 3300025273 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 41 | 3300025291 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 42 | 3300025292 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 43 | 3300025294 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 44 | 3300025295 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 45 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 46 | 3300025299 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 47 | 3300025303 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 48 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 49 | 3300025728 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300027312 | Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300027543 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300030500 | Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) | Metagenome | Rhizosphere |
| 65 | 3300030521 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM | Metagenome | Unclassified |
| 66 | 3300030742 | Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 | Metagenome | Rhizosphere |
| 67 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 68 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 69 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 70 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 71 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 72 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 73 | 3300035113 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 74 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 75 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 76 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 77 | 3300039062 | Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 | Metagenome | Unclassified |
| 78 | 3300039145 | Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JP6-T1 | Metagenome | Unclassified |
| 79 | 3300039438 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 | Metagenome | Rhizosphere |
| 80 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 81 | 3300041413 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 | Metagenome | Rhizosphere |
| 82 | 3300041512 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG | Metagenome | Unclassified |
| 83 | 3300042004 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 | Metagenome | Rhizosphere |
| 84 | 3300042006 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 | Metagenome | Rhizosphere |
| 85 | 3300042007 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 | Metagenome | Rhizosphere |
| 86 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 87 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 88 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 89 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300046501 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046525 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046530 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046542 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046557 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046692 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300047318 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 101 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 102 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 103 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 104 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 105 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 106 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 107 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 108 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 109 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 110 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 111 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 112 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 113 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 114 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 115 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 116 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 117 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 118 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 119 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 120 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 121 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 122 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 123 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 124 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 125 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 126 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 127 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 128 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 129 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 130 | 3300053109 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere | Metagenome | Endosphere |
| 131 | 3300053735 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere | Metagenome | Endosphere |
| 132 | 2571042365 | Lysobacter oryzae DSM 21044 | Isolate | Rhizosphere |
| 133 | 2524614729 | Arenimonas oryziterrae YC6267, DSM 21050 | Isolate | Rhizosphere |
| 134 | 2547132130 | Stenotrophomonas maltophilia RR-10 | Isolate | Unclassified |
| 135 | 2576861471 | Stenotrophomonas rhizophila DSM 14405 | Isolate | Rhizosphere |
| 136 | 2627854209 | Arenimonas oryziterrae YC6267, DSM 21050 | Isolate | Rhizosphere |
| 137 | 2643221559 | Lysobacter sp. Root559 | Isolate | Unclassified |
| 138 | 2643221573 | Lysobacter sp. Root604 | Isolate | Unclassified |
| 139 | 2643221579 | Pseudoxanthomonas sp. Root630 | Isolate | Unclassified |
| 140 | 2643221581 | Pseudoxanthomonas sp. Root65 | Isolate | Unclassified |
| 141 | 2643221586 | Lysobacter sp. Root667 | Isolate | Unclassified |
| 142 | 2643221612 | Lysobacter sp. Root76 | Isolate | Unclassified |
| 143 | 2643221695 | Lysobacter sp. Root494 | Isolate | Unclassified |
| 144 | 2643221720 | Lysobacter sp. Root916 | Isolate | Unclassified |
| 145 | 2643221727 | Lysobacter sp. Root96 | Isolate | Unclassified |
| 146 | 2643221728 | Lysobacter sp. Root983 | Isolate | Unclassified |
| 147 | 2747842428 | Stenotrophomonas sp. WCS2014-113 | Isolate | Unclassified |
| 148 | 2765235840 | Stenotrophomonas maltophilia AA1 | Isolate | Unclassified |
| 149 | 2816332141 | Stenotrophomonas muris 1190 (v2) (version 2) | Isolate | Unclassified |
| 150 | 2842391507 | Stenotrophomonas maltophilia SEMIA 4027 | Isolate | Nodule |
| 151 | 2842780639 | Pseudoxanthomonas sp. R-71986 | Isolate | Unclassified |
| 152 | 2852649853 | Stenotrophomonas sp. JAI102 | Isolate | Rhizosphere |
| 153 | 2852684882 | Xanthomonas sp. JAI131 | Isolate | Rhizosphere |
| 154 | 2857442823 | Stenotrophomonas sp. R-74235 | Isolate | Unclassified |
| 155 | 2874220319 | Stenotrophomonas maltophilia PS5 | Isolate | Unclassified |
| 156 | 2919089067 | Stenotrophomonas sp. 1337 | Isolate | Rhizosphere |
| 157 | 2919134579 | Stenotrophomonas geniculata 1733 | Isolate | Rhizosphere |
| 158 | 2919513703 | Luteimonas sp. 3794 | Isolate | Unclassified |
| 159 | 2923516293 | Pseudoxanthomonas mexicana SLBN-89 | Isolate | Rhizosphere |
| 160 | 2928496128 | Stenotrophomonas indicatrix 1163 | Isolate | Unclassified |
| 161 | 2931380184 | Stenotrophomonas sp. DR822 | Isolate | Rhizosphere |
| 162 | 2937610967 | Stenotrophomonas maltophilia EP20 | Isolate | Unclassified |
| 163 | 2939589442 | Stenotrophomonas rhizophila 716 | Isolate | Rhizosphere |
| 164 | 2939622612 | Stenotrophomonas sp. 2619 | Isolate | Rhizosphere |
| 165 | 2939626828 | Stenotrophomonas sp. 2694 | Isolate | Rhizosphere |
| 166 | 2941475908 | Stenotrophomonas rhizophila 2680 | Isolate | Rhizosphere |
| 167 | 2961047084 | Stenotrophomonas maltophilia EP5 | Isolate | Unclassified |
| 168 | 2961064222 | Stenotrophomonas maltophilia EP13 | Isolate | Unclassified |
| 169 | 2974307012 | Stenotrophomonas sp. SORGH_AS_0282 | Isolate | Unclassified |
| 170 | 2977247770 | Stenotrophomonas rhizophila SORGH_AS 457 | Isolate | Unclassified |
| 171 | 2984514374 | Stenotrophomonas sp. SORGH_AS282 | Isolate | Aerial Root |
| 172 | 8002869464 | Pseudoxanthomonas helianthi 110414 | Isolate | Unclassified |
| 173 | 8003014200 | Lysobacter changpingensis Cm-3-T8 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 83.13 |
| Metatranscriptomes | 0 |
| Isolates | 16.87 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0.4 |
| Bulb | 0 |
| Endosphere | 21.69 |
| Nodule | 0.4 |
| Rhizoplane | 0.8 |
| Rhizosphere | 52.21 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI26145J50221_1001187 | 3300003371 | Bacteria | 2064 |
| 2 | Ga0055526_1000485 | 3300003771 | Bacteria | 31543 |
| 3 | Ga0055537_1000431 | 3300003773 | Bacteria | 27203 |
| 4 | Ga0055524_1002861 | 3300003775 | Bacteria | 8653 |
| 5 | Ga0055536_1000650 | 3300003781 | Bacteria | 23543 |
| 6 | Ga0055536_1002163 | 3300003781 | Bacteria | 11201 |
| 7 | Ga0055536_1003550 | 3300003781 | Bacteria | 8344 |
| 8 | Ga0055536_1003562 | 3300003781 | Bacteria | 8325 |
| 9 | Ga0055534_1000309 | 3300003784 | Bacteria | 32662 |
| 10 | Ga0055528_1000991 | 3300003790 | Bacteria | 18859 |
| 11 | Ga0055530_10001071 | 3300003791 | Bacteria | 21561 |
| 12 | Ga0055530_10001268 | 3300003791 | Bacteria | 19106 |
| 13 | Ga0055530_10001411 | 3300003791 | Bacteria | 17674 |
| 14 | Ga0055531_10002916 | 3300003794 | Bacteria | 11132 |
| 15 | Ga0055531_10004683 | 3300003794 | Bacteria | 8197 |
| 16 | Ga0055531_10007117 | 3300003794 | Bacteria | 6176 |
| 17 | Ga0055531_10016072 | 3300003794 | Bacteria | 3254 |
| 18 | Ga0055531_10022873 | 3300003794 | Bacteria | 2365 |
| 19 | Ga0058692_1000022 | 3300003856 | Bacteria | 237321 |
| 20 | Ga0065704_10000352 | 3300005289 | Bacteria | 30138 |
| 21 | Ga0070680_100072257 | 3300005336 | Bacteria | 2835 |
| 22 | Ga0070691_10009968 | 3300005341 | Bacteria | 4328 |
| 23 | Ga0070668_100016351 | 3300005347 | Bacteria | 5548 |
| 24 | Ga0070678_100014709 | 3300005456 | Bacteria | 4948 |
| 25 | Ga0070681_10027194 | 3300005458 | Bacteria | 5752 |
| 26 | Ga0070679_100024170 | 3300005530 | Bacteria | 5953 |
| 27 | Ga0070672_100014378 | 3300005543 | Bacteria | 5609 |
| 28 | Ga0070693_100001806 | 3300005547 | Bacteria | 9757 |
| 29 | Ga0070665_100045092 | 3300005548 | Bacteria | 4427 |
| 30 | Ga0068855_100057437 | 3300005563 | Bacteria | 4561 |
| 31 | Ga0068859_100116103 | 3300005617 | Bacteria | 2741 |
| 32 | Ga0097620_100116107 | 3300006931 | Bacteria | 2741 |
| 33 | Ga0105244_10022883 | 3300009036 | Bacteria | 3436 |
| 34 | Ga0105240_10023536 | 3300009093 | Bacteria | 8143 |
| 35 | Ga0105240_10094744 | 3300009093 | Bacteria | 3641 |
| 36 | Ga0105243_10059852 | 3300009148 | Bacteria | 3041 |
| 37 | Ga0105248_10038376 | 3300009177 | Bacteria | 5361 |
| 38 | Ga0105032_100482 | 3300009979 | Bacteria | 3990 |
| 39 | Ga0157373_10047435 | 3300013100 | Bacteria | 3064 |
| 40 | Ga0157371_10000819 | 3300013102 | Bacteria | 35696 |
| 41 | Ga0157370_10010606 | 3300013104 | Bacteria | 9699 |
| 42 | Ga0157370_10055535 | 3300013104 | Bacteria | 3772 |
| 43 | Ga0157369_10048923 | 3300013105 | Bacteria | 4585 |
| 44 | Ga0157369_10086696 | 3300013105 | Bacteria | 3343 |
| 45 | Ga0157372_10081863 | 3300013307 | Bacteria | 3654 |
| 46 | Ga0182008_10000187 | 3300014497 | Bacteria | 48971 |
| 47 | Ga0182008_10013734 | 3300014497 | Bacteria | 4255 |
| 48 | Ga0182008_10030977 | 3300014497 | Bacteria | 2694 |
| 49 | Ga0182007_10000099 | 3300015262 | Bacteria | 60975 |
| 50 | Ga0182005_1000495 | 3300015265 | Bacteria | 20104 |
| 51 | Ga0163161_10004122 | 3300017792 | Bacteria | 10166 |
| 52 | Ga0213872_10003879 | 3300021361 | Bacteria | 8119 |
| 53 | Ga0209565_1000031 | 3300025263 | Bacteria | 320341 |
| 54 | Ga0209673_1000484 | 3300025273 | Bacteria | 66361 |
| 55 | Ga0209673_1003811 | 3300025273 | Bacteria | 8549 |
| 56 | Ga0209675_1000015 | 3300025291 | Bacteria | 403517 |
| 57 | Ga0209676_1000027 | 3300025292 | Bacteria | 560222 |
| 58 | Ga0209676_1000225 | 3300025292 | Bacteria | 124018 |
| 59 | Ga0209676_1000892 | 3300025292 | Bacteria | 38056 |
| 60 | Ga0209676_1001264 | 3300025292 | Bacteria | 26303 |
| 61 | Ga0209676_1002621 | 3300025292 | Bacteria | 12291 |
| 62 | Ga0209676_1002837 | 3300025292 | Bacteria | 11459 |
| 63 | Ga0209676_1006545 | 3300025292 | Bacteria | 5721 |
| 64 | Ga0209025_1001373 | 3300025294 | Bacteria | 32662 |
| 65 | Ga0209025_1004174 | 3300025294 | Bacteria | 12773 |
| 66 | Ga0209564_1000480 | 3300025295 | Bacteria | 66421 |
| 67 | Ga0209050_1000201 | 3300025298 | Bacteria | 134028 |
| 68 | Ga0209050_1000998 | 3300025298 | Bacteria | 35642 |
| 69 | Ga0209050_1001626 | 3300025298 | Bacteria | 23042 |
| 70 | Ga0209050_1006533 | 3300025298 | Bacteria | 6869 |
| 71 | Ga0209256_1001873 | 3300025299 | Bacteria | 19411 |
| 72 | Ga0209256_1001920 | 3300025299 | Bacteria | 19010 |
| 73 | Ga0209256_1002659 | 3300025299 | Bacteria | 14029 |
| 74 | Ga0209256_1007626 | 3300025299 | Bacteria | 5274 |
| 75 | Ga0209256_1016533 | 3300025299 | Bacteria | 2507 |
| 76 | Ga0209051_1001219 | 3300025303 | Bacteria | 23138 |
| 77 | Ga0209051_1010617 | 3300025303 | Bacteria | 4624 |
| 78 | Ga0209257_1000150 | 3300025304 | Bacteria | 191487 |
| 79 | Ga0209257_1000208 | 3300025304 | Bacteria | 141393 |
| 80 | Ga0209257_1000274 | 3300025304 | Bacteria | 117076 |
| 81 | Ga0209257_1000307 | 3300025304 | Bacteria | 105179 |
| 82 | Ga0209257_1000664 | 3300025304 | Bacteria | 54069 |
| 83 | Ga0209257_1002185 | 3300025304 | Bacteria | 20247 |
| 84 | Ga0209257_1002641 | 3300025304 | Bacteria | 17251 |
| 85 | Ga0209257_1004301 | 3300025304 | Bacteria | 11195 |
| 86 | Ga0209257_1015275 | 3300025304 | Bacteria | 3212 |
| 87 | Ga0207655_1036581 | 3300025728 | Bacteria | 2174 |
| 88 | Ga0207705_10038888 | 3300025909 | Bacteria | 3408 |
| 89 | Ga0207707_10040894 | 3300025912 | Bacteria | 4048 |
| 90 | Ga0207695_10001227 | 3300025913 | Bacteria | 43906 |
| 91 | Ga0207695_10003047 | 3300025913 | Bacteria | 24012 |
| 92 | Ga0207657_10011157 | 3300025919 | Bacteria | 8932 |
| 93 | Ga0207652_10117364 | 3300025921 | Bacteria | 2364 |
| 94 | Ga0207681_10019223 | 3300025923 | Bacteria | 4315 |
| 95 | Ga0207650_10086833 | 3300025925 | Bacteria | 2382 |
| 96 | Ga0207709_10001467 | 3300025935 | Bacteria | 16381 |
| 97 | Ga0207709_10018352 | 3300025935 | Bacteria | 3917 |
| 98 | Ga0207691_10024811 | 3300025940 | Bacteria | 5635 |
| 99 | Ga0207711_10010908 | 3300025941 | Bacteria | 7551 |
| 100 | Ga0207667_10014092 | 3300025949 | Bacteria | 9127 |
| 101 | Ga0207667_10154820 | 3300025949 | Bacteria | 2359 |
| 102 | Ga0207702_10033573 | 3300026078 | Bacteria | 4287 |
| 103 | Ga0209371_1000004 | 3300027312 | Bacteria | 1098197 |
| 104 | Ga0209999_1000442 | 3300027543 | Bacteria | 6380 |
| 105 | Ga0268256_1000005 | 3300030500 | Bacteria | 1082342 |
| 106 | Ga0307511_10028010 | 3300030521 | Bacteria | 5129 |
| 107 | Ga0316183_1165910 | 3300030742 | Bacteria | 12412 |
| 108 | Ga0307513_10005721 | 3300031456 | Bacteria | 16360 |
| 109 | Ga0307408_100087362 | 3300031548 | Bacteria | 2346 |
| 110 | Ga0307516_10012018 | 3300031730 | Bacteria | 9361 |
| 111 | Ga0307412_10001292 | 3300031911 | Bacteria | 14043 |
| 112 | Ga0307414_10000179 | 3300032004 | Bacteria | 43124 |
| 113 | Ga0307414_10001193 | 3300032004 | Bacteria | 13354 |
| 114 | Ga0307414_10060863 | 3300032004 | Bacteria | 2672 |
| 115 | Ga0307507_10031805 | 3300033179 | Bacteria | 5528 |
| 116 | Ga0307507_10038897 | 3300033179 | Bacteria | 4811 |
| 117 | Ga0373936_0012999 | 3300035113 | Bacteria | 3174 |
| 118 | Ga0316574_0009795 | 3300035398 | Bacteria | 5385 |
| 119 | Ga0316574_0047333 | 3300035398 | Bacteria | 2669 |
| 120 | Ga0395899_0000004 | 3300037312 | Bacteria | 874267 |
| 121 | Ga0395905_0004110 | 3300037471 | Bacteria | 15248 |
| 122 | Ga0395905_0030220 | 3300037471 | Bacteria | 5107 |
| 123 | Ga0395905_0070086 | 3300037471 | Bacteria | 3285 |
| 124 | Ga0400483_087805 | 3300039062 | Bacteria | 3595 |
| 125 | Ga0237816_00004 | 3300039145 | Bacteria | 14834 |
| 126 | Ga0436360_0156933 | 3300039438 | Bacteria | 6063 |
| 127 | Ga0436361_0654765 | 3300039447 | Bacteria | 9296 |
| 128 | Ga0436361_0730197 | 3300039447 | Bacteria | 2903 |
| 129 | Ga0439465_0000217 | 3300041413 | Bacteria | 15394 |
| 130 | Ga0439465_0000536 | 3300041413 | Bacteria | 11388 |
| 131 | Ga0451853_3663456 | 3300041512 | Bacteria | 3724 |
| 132 | Ga0439445_0008004 | 3300042004 | Bacteria | 2465 |
| 133 | Ga0439432_007825 | 3300042006 | Bacteria | 3769 |
| 134 | Ga0439449_0000026 | 3300042007 | Bacteria | 43972 |
| 135 | Ga0439449_0004517 | 3300042007 | Bacteria | 5375 |
| 136 | Ga0439449_0004628 | 3300042007 | Bacteria | 5311 |
| 137 | Ga0439449_0014219 | 3300042007 | Bacteria | 2992 |
| 138 | Ga0439449_0015611 | 3300042007 | Bacteria | 2855 |
| 139 | Ga0453684_0000136 | 3300044712 | Bacteria | 323402 |
| 140 | Ga0466959_0073650 | 3300045049 | Bacteria | 2470 |
| 141 | Ga0451576_0000025 | 3300045051 | Bacteria | 427980 |
| 142 | Ga0495629_0057046 | 3300046459 | Bacteria | 2731 |
| 143 | Ga0495607_0061595 | 3300046501 | Bacteria | 2131 |
| 144 | Ga0495643_0010317 | 3300046522 | Bacteria | 5751 |
| 145 | Ga0495663_0008116 | 3300046525 | Bacteria | 2904 |
| 146 | Ga0495654_0011631 | 3300046530 | Bacteria | 4756 |
| 147 | Ga0495597_0004343 | 3300046542 | Bacteria | 7815 |
| 148 | Ga0495622_0008704 | 3300046557 | Bacteria | 4702 |
| 149 | Ga0495668_0038871 | 3300046616 | Bacteria | 2658 |
| 150 | Ga0495668_0039260 | 3300046616 | Bacteria | 2643 |
| 151 | Ga0495671_0005092 | 3300046692 | Bacteria | 7735 |
| 152 | Ga0495636_0000849 | 3300047318 | Bacteria | 11264 |
| 153 | Ga0495672_0000230 | 3300047320 | Bacteria | 79829 |
| 154 | Ga0495672_0001351 | 3300047320 | Bacteria | 24303 |
| 155 | Ga0496104_0037002 | 3300048907 | Bacteria | 4564 |
| 156 | Ga0496114_0001533 | 3300048917 | Bacteria | 17508 |
| 157 | Ga0496116_0003903 | 3300048919 | Bacteria | 14525 |
| 158 | Ga0496117_0001028 | 3300048920 | Bacteria | 42597 |
| 159 | Ga0496117_0008349 | 3300048920 | Bacteria | 9845 |
| 160 | Ga0496118_0000944 | 3300048921 | Bacteria | 45453 |
| 161 | Ga0496118_0001053 | 3300048921 | Bacteria | 43048 |
| 162 | Ga0496118_0018350 | 3300048921 | Bacteria | 6316 |
| 163 | Ga0496119_0000979 | 3300048922 | Bacteria | 36683 |
| 164 | Ga0496120_0001049 | 3300048923 | Bacteria | 36674 |
| 165 | Ga0496121_0005871 | 3300048924 | Bacteria | 15545 |
| 166 | Ga0496121_0010838 | 3300048924 | Bacteria | 10195 |
| 167 | Ga0496121_0098563 | 3300048924 | Bacteria | 2261 |
| 168 | Ga0496122_0025254 | 3300048925 | Bacteria | 5166 |
| 169 | Ga0496122_0064315 | 3300048925 | Bacteria | 2669 |
| 170 | Ga0496123_0011157 | 3300048926 | Bacteria | 7825 |
| 171 | Ga0496123_0012437 | 3300048926 | Bacteria | 7256 |
| 172 | Ga0496123_0027604 | 3300048926 | Bacteria | 4224 |
| 173 | Ga0496124_0000009 | 3300048927 | Bacteria | 734820 |
| 174 | Ga0496124_0000390 | 3300048927 | Bacteria | 79997 |
| 175 | Ga0496124_0003204 | 3300048927 | Bacteria | 20202 |
| 176 | Ga0496124_0007173 | 3300048927 | Bacteria | 11913 |
| 177 | Ga0496124_0019295 | 3300048927 | Bacteria | 6351 |
| 178 | Ga0496124_0057668 | 3300048927 | Bacteria | 3271 |
| 179 | Ga0496125_0006421 | 3300048928 | Bacteria | 12708 |
| 180 | Ga0496125_0017477 | 3300048928 | Bacteria | 6833 |
| 181 | Ga0496125_0036989 | 3300048928 | Bacteria | 4250 |
| 182 | Ga0496126_0005793 | 3300048929 | Bacteria | 13968 |
| 183 | Ga0496126_0050581 | 3300048929 | Bacteria | 3786 |
| 184 | Ga0496126_0095527 | 3300048929 | Bacteria | 2607 |
| 185 | Ga0501031_0014899 | 3300049568 | Bacteria | 5052 |
| 186 | Ga0501032_0002708 | 3300049569 | Bacteria | 13819 |
| 187 | Ga0501033_0072802 | 3300049570 | Bacteria | 2523 |
| 188 | Ga0501034_0000273 | 3300049571 | Bacteria | 93198 |
| 189 | Ga0501034_0000544 | 3300049571 | Bacteria | 59969 |
| 190 | Ga0501034_0010307 | 3300049571 | Bacteria | 9744 |
| 191 | Ga0501036_0058327 | 3300049572 | Bacteria | 3270 |
| 192 | Ga0501037_0014407 | 3300049573 | Bacteria | 5820 |
| 193 | Ga0501038_0021948 | 3300049574 | Bacteria | 5725 |
| 194 | Ga0501043_0017421 | 3300049579 | Bacteria | 5631 |
| 195 | Ga0501047_0071683 | 3300049581 | Bacteria | 3335 |
| 196 | Ga0501067_0014279 | 3300049583 | Bacteria | 4397 |
| 197 | Ga0501070_0032028 | 3300049586 | Bacteria | 4402 |
| 198 | Ga0501072_0009805 | 3300049588 | Bacteria | 7284 |
| 199 | Ga0501073_0019674 | 3300049589 | Bacteria | 4872 |
| 200 | Ga0501080_0077364 | 3300049742 | Bacteria | 3094 |
| 201 | Ga0501080_0093934 | 3300049742 | Bacteria | 2785 |
| 202 | Ga0501035_0027970 | 3300049822 | Bacteria | 5151 |
| 203 | Ga0501044_0000787 | 3300049823 | Bacteria | 38327 |
| 204 | Ga0501044_0014305 | 3300049823 | Bacteria | 8565 |
| 205 | nmdc:mga00v17_31944_c1 | 3300050491 | Bacteria | 3109 |
| 206 | Ga0500569_000215 | 3300053109 | Bacteria | 9175 |
| 207 | Ga0500596_003762 | 3300053735 | Bacteria | 2848 |
| 208 | 2572255427 | 2571042365 | Bacteria | 3289345 |
| 209 | 2525557198 | 2524614729 | Bacteria | 3091755 |
| 210 | 2547500646 | 2547132130 | Bacteria | 4660562 |
| 211 | 2578459201 | 2576861471 | Bacteria | 4648976 |
| 212 | 2630648794 | 2627854209 | Bacteria | 3093011 |
| 213 | 2643816381 | 2643221559 | Bacteria | 4424915 |
| 214 | 2643881492 | 2643221573 | Bacteria | 4784121 |
| 215 | 2643905499 | 2643221579 | Bacteria | 4443405 |
| 216 | 2643913360 | 2643221581 | Bacteria | 3893603 |
| 217 | 2643938937 | 2643221586 | Bacteria | 4446529 |
| 218 | 2644077320 | 2643221612 | Bacteria | 4361984 |
| 219 | 2644529787 | 2643221695 | Bacteria | 3441323 |
| 220 | 2644662629 | 2643221720 | Bacteria | 4694283 |
| 221 | 2644694370 | 2643221727 | Bacteria | 4415595 |
| 222 | 2644698417 | 2643221728 | Bacteria | 4797149 |
| 223 | 2747949585 | 2747842428 | Bacteria | 4689383 |
| 224 | 2765578115 | 2765235840 | Bacteria | 4663337 |
| 225 | 2816516176 | 2816332141 | Bacteria | 4436036 |
| 226 | 2842393634 | 2842391507 | Bacteria | 4486072 |
| 227 | 2842781231 | 2842780639 | Bacteria | 4337790 |
| 228 | 2852651560 | 2852649853 | Bacteria | 4036942 |
| 229 | 2852686479 | 2852684882 | Bacteria | 5463342 |
| 230 | 2857442950 | 2857442823 | Bacteria | 4562550 |
| 231 | 2874220770 | 2874220319 | Bacteria | 4594709 |
| 232 | 2919090800 | 2919089067 | Bacteria | 4560942 |
| 233 | 2919134579 | 2919134579 | Bacteria | 4480386 |
| 234 | 2919516885 | 2919513703 | Bacteria | 3844312 |
| 235 | 2923517615 | 2923516293 | Bacteria | 3716336 |
| 236 | 2928496784 | 2928496128 | Bacteria | 4631123 |
| 237 | 2931381607 | 2931380184 | Bacteria | 4455911 |
| 238 | 2937611602 | 2937610967 | Bacteria | 4618818 |
| 239 | 2939592184 | 2939589442 | Bacteria | 4214238 |
| 240 | 2939625114 | 2939622612 | Bacteria | 4698046 |
| 241 | 2939627536 | 2939626828 | Bacteria | 4695272 |
| 242 | 2941476986 | 2941475908 | Bacteria | 4145589 |
| 243 | 2961047535 | 2961047084 | Bacteria | 4594415 |
| 244 | 2961068317 | 2961064222 | Bacteria | 4749990 |
| 245 | 2974309640 | 2974307012 | Bacteria | 4172388 |
| 246 | 2977250388 | 2977247770 | Bacteria | 4160543 |
| 247 | 2984515147 | 2984514374 | Bacteria | 4172479 |
| 248 | 8002869635 | 8002869464 | Bacteria | 3588529 |
| 249 | 8003016662 | 8003014200 | Bacteria | 4059994 |
| 250 | JGI26145J50221_1001187 | |||
| 251 | Ga0055526_1000485 | |||
| 252 | Ga0055537_1000431 | |||
| 253 | Ga0055524_1002861 | |||
| 254 | Ga0055536_1000650 | |||
| 255 | Ga0055536_1002163 | |||
| 256 | Ga0055536_1003550 | |||
| 257 | Ga0055536_1003562 | |||
| 258 | Ga0055534_1000309 | |||
| 259 | Ga0055528_1000991 | |||
| 260 | Ga0055530_10001071 | |||
| 261 | Ga0055530_10001268 | |||
| 262 | Ga0055530_10001411 | |||
| 263 | Ga0055531_10002916 | |||
| 264 | Ga0055531_10004683 | |||
| 265 | Ga0055531_10007117 | |||
| 266 | Ga0055531_10016072 | |||
| 267 | Ga0055531_10022873 | |||
| 268 | Ga0058692_1000022 | |||
| 269 | Ga0065704_10000352 | |||
| 270 | Ga0070680_100072257 | |||
| 271 | Ga0070691_10009968 | |||
| 272 | Ga0070668_100016351 | |||
| 273 | Ga0070678_100014709 | |||
| 274 | Ga0070681_10027194 | |||
| 275 | Ga0070679_100024170 | |||
| 276 | Ga0070672_100014378 | |||
| 277 | Ga0070693_100001806 | |||
| 278 | Ga0070665_100045092 | |||
| 279 | Ga0068855_100057437 | |||
| 280 | Ga0068859_100116103 | |||
| 281 | Ga0097620_100116107 | |||
| 282 | Ga0105244_10022883 | |||
| 283 | Ga0105240_10023536 | |||
| 284 | Ga0105240_10094744 | |||
| 285 | Ga0105243_10059852 | |||
| 286 | Ga0105248_10038376 | |||
| 287 | Ga0105032_100482 | |||
| 288 | Ga0157373_10047435 | |||
| 289 | Ga0157371_10000819 | |||
| 290 | Ga0157370_10010606 | |||
| 291 | Ga0157370_10055535 | |||
| 292 | Ga0157369_10048923 | |||
| 293 | Ga0157369_10086696 | |||
| 294 | Ga0157372_10081863 | |||
| 295 | Ga0182008_10000187 | |||
| 296 | Ga0182008_10013734 | |||
| 297 | Ga0182008_10030977 | |||
| 298 | Ga0182007_10000099 | |||
| 299 | Ga0182005_1000495 | |||
| 300 | Ga0163161_10004122 | |||
| 301 | Ga0213872_10003879 | |||
| 302 | Ga0209565_1000031 | |||
| 303 | Ga0209673_1000484 | |||
| 304 | Ga0209673_1003811 | |||
| 305 | Ga0209675_1000015 | |||
| 306 | Ga0209676_1000027 | |||
| 307 | Ga0209676_1000225 | |||
| 308 | Ga0209676_1000892 | |||
| 309 | Ga0209676_1001264 | |||
| 310 | Ga0209676_1002621 | |||
| 311 | Ga0209676_1002837 | |||
| 312 | Ga0209676_1006545 | |||
| 313 | Ga0209025_1001373 | |||
| 314 | Ga0209025_1004174 | |||
| 315 | Ga0209564_1000480 | |||
| 316 | Ga0209050_1000201 | |||
| 317 | Ga0209050_1000998 | |||
| 318 | Ga0209050_1001626 | |||
| 319 | Ga0209050_1006533 | |||
| 320 | Ga0209256_1001873 | |||
| 321 | Ga0209256_1001920 | |||
| 322 | Ga0209256_1002659 | |||
| 323 | Ga0209256_1007626 | |||
| 324 | Ga0209256_1016533 | |||
| 325 | Ga0209051_1001219 | |||
| 326 | Ga0209051_1010617 | |||
| 327 | Ga0209257_1000150 | |||
| 328 | Ga0209257_1000208 | |||
| 329 | Ga0209257_1000274 | |||
| 330 | Ga0209257_1000307 | |||
| 331 | Ga0209257_1000664 | |||
| 332 | Ga0209257_1002185 | |||
| 333 | Ga0209257_1002641 | |||
| 334 | Ga0209257_1004301 | |||
| 335 | Ga0209257_1015275 | |||
| 336 | Ga0207655_1036581 | |||
| 337 | Ga0207705_10038888 | |||
| 338 | Ga0207707_10040894 | |||
| 339 | Ga0207695_10001227 | |||
| 340 | Ga0207695_10003047 | |||
| 341 | Ga0207657_10011157 | |||
| 342 | Ga0207652_10117364 | |||
| 343 | Ga0207681_10019223 | |||
| 344 | Ga0207650_10086833 | |||
| 345 | Ga0207709_10001467 | |||
| 346 | Ga0207709_10018352 | |||
| 347 | Ga0207691_10024811 | |||
| 348 | Ga0207711_10010908 | |||
| 349 | Ga0207667_10014092 | |||
| 350 | Ga0207667_10154820 | |||
| 351 | Ga0207702_10033573 | |||
| 352 | Ga0209371_1000004 | |||
| 353 | Ga0209999_1000442 | |||
| 354 | Ga0268256_1000005 | |||
| 355 | Ga0307511_10028010 | |||
| 356 | Ga0316183_1165910 | |||
| 357 | Ga0307513_10005721 | |||
| 358 | Ga0307408_100087362 | |||
| 359 | Ga0307516_10012018 | |||
| 360 | Ga0307412_10001292 | |||
| 361 | Ga0307414_10000179 | |||
| 362 | Ga0307414_10001193 | |||
| 363 | Ga0307414_10060863 | |||
| 364 | Ga0307507_10031805 | |||
| 365 | Ga0307507_10038897 | |||
| 366 | Ga0373936_0012999 | |||
| 367 | Ga0316574_0009795 | |||
| 368 | Ga0316574_0047333 | |||
| 369 | Ga0395899_0000004 | |||
| 370 | Ga0395905_0004110 | |||
| 371 | Ga0395905_0030220 | |||
| 372 | Ga0395905_0070086 | |||
| 373 | Ga0400483_087805 | |||
| 374 | Ga0237816_00004 | |||
| 375 | Ga0436360_0156933 | |||
| 376 | Ga0436361_0654765 | |||
| 377 | Ga0436361_0730197 | |||
| 378 | Ga0439465_0000217 | |||
| 379 | Ga0439465_0000536 | |||
| 380 | Ga0451853_3663456 | |||
| 381 | Ga0439445_0008004 | |||
| 382 | Ga0439432_007825 | |||
| 383 | Ga0439449_0000026 | |||
| 384 | Ga0439449_0004517 | |||
| 385 | Ga0439449_0004628 | |||
| 386 | Ga0439449_0014219 | |||
| 387 | Ga0439449_0015611 | |||
| 388 | Ga0453684_0000136 | |||
| 389 | Ga0466959_0073650 | |||
| 390 | Ga0451576_0000025 | |||
| 391 | Ga0495629_0057046 | |||
| 392 | Ga0495607_0061595 | |||
| 393 | Ga0495643_0010317 | |||
| 394 | Ga0495663_0008116 | |||
| 395 | Ga0495654_0011631 | |||
| 396 | Ga0495597_0004343 | |||
| 397 | Ga0495622_0008704 | |||
| 398 | Ga0495668_0038871 | |||
| 399 | Ga0495668_0039260 | |||
| 400 | Ga0495671_0005092 | |||
| 401 | Ga0495636_0000849 | |||
| 402 | Ga0495672_0000230 | |||
| 403 | Ga0495672_0001351 | |||
| 404 | Ga0496104_0037002 | |||
| 405 | Ga0496114_0001533 | |||
| 406 | Ga0496116_0003903 | |||
| 407 | Ga0496117_0001028 | |||
| 408 | Ga0496117_0008349 | |||
| 409 | Ga0496118_0000944 | |||
| 410 | Ga0496118_0001053 | |||
| 411 | Ga0496118_0018350 | |||
| 412 | Ga0496119_0000979 | |||
| 413 | Ga0496120_0001049 | |||
| 414 | Ga0496121_0005871 | |||
| 415 | Ga0496121_0010838 | |||
| 416 | Ga0496121_0098563 | |||
| 417 | Ga0496122_0025254 | |||
| 418 | Ga0496122_0064315 | |||
| 419 | Ga0496123_0011157 | |||
| 420 | Ga0496123_0012437 | |||
| 421 | Ga0496123_0027604 | |||
| 422 | Ga0496124_0000009 | |||
| 423 | Ga0496124_0000390 | |||
| 424 | Ga0496124_0003204 | |||
| 425 | Ga0496124_0007173 | |||
| 426 | Ga0496124_0019295 | |||
| 427 | Ga0496124_0057668 | |||
| 428 | Ga0496125_0006421 | |||
| 429 | Ga0496125_0017477 | |||
| 430 | Ga0496125_0036989 | |||
| 431 | Ga0496126_0005793 | |||
| 432 | Ga0496126_0050581 | |||
| 433 | Ga0496126_0095527 | |||
| 434 | Ga0501031_0014899 | |||
| 435 | Ga0501032_0002708 | |||
| 436 | Ga0501033_0072802 | |||
| 437 | Ga0501034_0000273 | |||
| 438 | Ga0501034_0000544 | |||
| 439 | Ga0501034_0010307 | |||
| 440 | Ga0501036_0058327 | |||
| 441 | Ga0501037_0014407 | |||
| 442 | Ga0501038_0021948 | |||
| 443 | Ga0501043_0017421 | |||
| 444 | Ga0501047_0071683 | |||
| 445 | Ga0501067_0014279 | |||
| 446 | Ga0501070_0032028 | |||
| 447 | Ga0501072_0009805 | |||
| 448 | Ga0501073_0019674 | |||
| 449 | Ga0501080_0077364 | |||
| 450 | Ga0501080_0093934 | |||
| 451 | Ga0501035_0027970 | |||
| 452 | Ga0501044_0000787 | |||
| 453 | Ga0501044_0014305 | |||
| 454 | nmdc:mga00v17_31944_c1 | |||
| 455 | Ga0500569_000215 | |||
| 456 | Ga0500596_003762 | |||
| 457 | 2572255427 | |||
| 458 | 2525557198 | |||
| 459 | 2547500646 | |||
| 460 | 2578459201 | |||
| 461 | 2630648794 | |||
| 462 | 2643816381 | |||
| 463 | 2643881492 | |||
| 464 | 2643905499 | |||
| 465 | 2643913360 | |||
| 466 | 2643938937 | |||
| 467 | 2644077320 | |||
| 468 | 2644529787 | |||
| 469 | 2644662629 | |||
| 470 | 2644694370 | |||
| 471 | 2644698417 | |||
| 472 | 2747949585 | |||
| 473 | 2765578115 | |||
| 474 | 2816516176 | |||
| 475 | 2842393634 | |||
| 476 | 2842781231 | |||
| 477 | 2852651560 | |||
| 478 | 2852686479 | |||
| 479 | 2857442950 | |||
| 480 | 2874220770 | |||
| 481 | 2919090800 | |||
| 482 | 2919134579 | |||
| 483 | 2919516885 | |||
| 484 | 2923517615 | |||
| 485 | 2928496784 | |||
| 486 | 2931381607 | |||
| 487 | 2937611602 | |||
| 488 | 2939592184 | |||
| 489 | 2939625114 | |||
| 490 | 2939627536 | |||
| 491 | 2941476986 | |||
| 492 | 2961047535 | |||
| 493 | 2961068317 | |||
| 494 | 2974309640 | |||
| 495 | 2977250388 | |||
| 496 | 2984515147 | |||
| 497 | 8002869635 | |||
| 498 | 8003016662 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 6gs7-assembly1.cif.gz_A | crystal structure of peptide transporter dtpa-nanobody in glycine buffer | 0.9096 | 18 | 571 |
| 6gs4-assembly1.cif.gz_A | crystal structure of peptide transporter dtpa-nanobody in complex with valganciclovir | 0.9063 | 18 | 571 |
| 7zc2-assembly1.cif.gz_A | dipeptide and tripeptide permease c (dtpc) | 0.9061 | 18 | 568 |
| 6gs7-assembly1.cif.gz_A | crystal structure of peptide transporter dtpa-nanobody in glycine buffer | 0.9022 | 18 | 571 |
| 8b1j-assembly1.cif.gz_A | dtpb-nb132-sl | 0.9014 | 18 | 571 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P39276_1_480_1.20.1250.20 | Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains | 0.9137 | 18 | 568 | 1.20.1250.20 |
| 6gs4A00 | Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains | 0.9063 | 18 | 571 | 1.20.1250.20 |
| 6gs4A00 | Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains | 0.8971 | 18 | 571 | 1.20.1250.20 |
| af_P9WJW7_210_393_1.20.1250.20 | Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains | 0.8877 | 19 | 210 | 1.20.1250.20 |
| af_P39276_1_480_1.20.1250.20 | Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains | 0.8845 | 18 | 568 | 1.20.1250.20 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A7G9SQT3-F1-model_v4 | MFS transporter | 0.971 | 5 | 575 |
GO:0005886
GO:0006857 GO:1904680 |
| AF-A0A1H8QLN0-F1-model_v4 | Proton-dependent oligopeptide transporter, POT family | 0.9656 | 8 | 574 |
GO:0005886
GO:0006857 GO:1904680 |
| AF-A0A7G9SQT3-F1-model_v4 | MFS transporter | 0.9627 | 5 | 575 |
GO:0005886
GO:0006857 GO:1904680 |
| AF-A0A1Q4FJH8-F1-model_v4 | MFS transporter | 0.9626 | 5 | 575 |
GO:0005886
GO:0006857 GO:1904680 |
| AF-A0A3B0VPB1-F1-model_v4 | Di-tripeptide/cation symporter | 0.9619 | 5 | 575 |
GO:0005886
GO:0006857 GO:1904680 |