F361128

General Info

Members Datasets Scaffolds Average Seq Length
249 157 498 320

Family's Representative Sequence

Representative Sequence 3300050508|nmdc:mga09592_27321_c1|nmdc:mga09592_27321_c1_1962_3056
Length 364
Sequence VDGSTNAYRTDDNSRPRDVPTFIGLGMMSEQSGHLLAGFCENLGAMRADRLVAVLLLLQARGRVTAAEVAEELEVSERTARRDLEALAMAGIPVYSQAGRGGGWSLIGGARTDLSGLTAAEARTLFLVAGPSASATPAIKAALRKLVRALPEPFRAEAEAAASAVVIDPASWDRTQFPPPAHLEALQHAVVDGVQIRIVYASRNSPERERLVHPLGLVSKASVWYLVAGTDAGLRTFRVSRVRSVAPTEDAVDRPEGFDLEQTWESVKSELDERRVGYRARAFVEAEAVPWLRSDFGTRLSVTELRDDRGRLEVELRSWSGHTLAGELAAFARWVEVVEPAEVRDELARIGAELASRYGGPAGV

Samples

Sample ID Description Type Environment
1 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
2 3300002155 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7 Metagenome Rhizosphere
3 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
4 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
12 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
13 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
14 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
15 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
18 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
19 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
22 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
23 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
24 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
27 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
28 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
29 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
30 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
31 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
32 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
33 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
34 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
35 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
36 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
37 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
38 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
40 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
41 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
42 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
43 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
44 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
45 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
46 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
47 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
65 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
67 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
68 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
69 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
70 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
71 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
72 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
73 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
74 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
75 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
76 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
77 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
78 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
79 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
80 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
81 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
82 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
83 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
84 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
85 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
86 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
87 3300042003 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821FE14Z081617_5551 Metagenome Rhizosphere
88 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
89 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
90 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
91 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
92 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
93 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
94 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
95 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
96 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
97 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
98 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
99 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
100 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
101 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
102 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
103 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
104 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
105 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
106 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
107 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
122 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
123 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
124 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
125 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
126 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
127 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
128 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
129 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
130 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
131 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
132 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
133 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
134 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
135 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
137 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
138 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
139 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
140 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
141 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
142 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
143 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
144 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
145 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
146 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
147 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
148 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
149 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
150 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
151 2643221619 Agromyces sp. Root81 Isolate Unclassified
152 2643221715 Mycobacterium sp. Root265 Isolate Unclassified
153 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
154 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
155 2902810491 Mycolicibacterium sp. P9-22 Isolate Unclassified
156 2919395869 Microbacterium resistens 2980 Isolate Unclassified
157 2939582691 Mycolicibacterium sp. 624 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.79
Metatranscriptomes 0
Isolates 3.21

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.83
Nodule 0
Rhizoplane 10.84
Rhizosphere 78.71
Stem 0
Stem Tuber 0
Unclassified 0.8

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga09592_27321_c1 3300050508 Bacteria 4735
2 JGI24033J26618_1005052 3300002155 Unclassified 1444
3 JGI24751J29686_10000332 3300002459 Bacteria 17200
4 JGI24751J29686_10014959 3300002459 Bacteria 1601
5 JGI25164J39214_1000876 3300002772 Bacteria 10214
6 Ga0070670_100193427 3300005331 Bacteria 1767
7 Ga0070661_100008761 3300005344 Bacteria 7000
8 Ga0070675_100045620 3300005354 Bacteria 3587
9 Ga0070659_100103030 3300005366 Bacteria 2298
10 Ga0070709_10345474 3300005434 Bacteria 1098
11 Ga0070714_100001189 3300005435 Bacteria 18747
12 Ga0070700_100033761 3300005441 Bacteria 3084
13 Ga0070694_100141060 3300005444 Bacteria 1750
14 Ga0070708_100063044 3300005445 Bacteria 3317
15 Ga0070663_100093702 3300005455 Bacteria 2229
16 Ga0070678_100145525 3300005456 Bacteria 1902
17 Ga0070678_100156590 3300005456 Bacteria 1841
18 Ga0070681_10022186 3300005458 Bacteria 6372
19 Ga0070681_10071203 3300005458 Bacteria 3442
20 Ga0070684_100020585 3300005535 Bacteria 5472
21 Ga0070664_100013289 3300005564 Bacteria 6706
22 Ga0068857_100088277 3300005577 Bacteria 2774
23 Ga0068856_100200893 3300005614 Bacteria 2008
24 Ga0068864_100003395 3300005618 Bacteria 13158
25 Ga0068864_100065222 3300005618 Bacteria 3159
26 Ga0068870_10010154 3300005840 Bacteria 4310
27 Ga0068863_100004321 3300005841 Bacteria 14006
28 Ga0068858_100023031 3300005842 Bacteria 5808
29 Ga0068860_100060617 3300005843 Bacteria 3596
30 Ga0081455_10020151 3300005937 Bacteria 6291
31 Ga0081539_10005930 3300005985 Bacteria 12065
32 Ga0081539_10006633 3300005985 Bacteria 10982
33 Ga0075365_10001779 3300006038 Bacteria 10044
34 Ga0075365_10151869 3300006038 Bacteria 1611
35 Ga0075364_10011467 3300006051 Bacteria 5383
36 Ga0075364_10046269 3300006051 Bacteria 2833
37 Ga0075432_10010151 3300006058 Bacteria 3195
38 Ga0075369_10112237 3300006186 Bacteria 1229
39 Ga0075428_100006713 3300006844 Bacteria 12801
40 Ga0075428_100121647 3300006844 Bacteria 2842
41 Ga0075428_100346090 3300006844 Bacteria 1596
42 Ga0075430_100068713 3300006846 Bacteria 2972
43 Ga0075430_100070443 3300006846 Bacteria 2933
44 Ga0075430_100127800 3300006846 Bacteria 2119
45 Ga0075430_100307986 3300006846 Bacteria 1310
46 Ga0075431_100022107 3300006847 Bacteria 6505
47 Ga0075431_100023447 3300006847 Bacteria 6314
48 Ga0075431_100130865 3300006847 Bacteria 2588
49 Ga0075431_100307157 3300006847 Bacteria 1602
50 Ga0075434_100027763 3300006871 Bacteria 5558
51 Ga0075429_100015361 3300006880 Bacteria 6635
52 Ga0075429_100245837 3300006880 Bacteria 1566
53 Ga0105247_10094106 3300009101 Bacteria 1906
54 Ga0114129_10023505 3300009147 Bacteria 8737
55 Ga0105243_10034065 3300009148 Bacteria 3940
56 Ga0105243_10115947 3300009148 Bacteria 2250
57 Ga0105248_10008865 3300009177 Bacteria 11054
58 Ga0163163_10001857 3300014325 Bacteria 17838
59 Ga0163163_10031696 3300014325 Bacteria 5104
60 Ga0163163_10220828 3300014325 Bacteria 1944
61 Ga0157379_10305651 3300014968 Bacteria 1450
62 Ga0213873_10012883 3300021358 Bacteria 1822
63 Ga0207427_100052 3300025231 Bacteria 218228
64 Ga0209437_100451 3300025233 Bacteria 33803
65 Ga0209233_1000001 3300025261 Bacteria 2992747
66 Ga0207643_10000127 3300025908 Bacteria 52174
67 Ga0207684_10175448 3300025910 Bacteria 1848
68 Ga0207707_10081966 3300025912 Bacteria 2816
69 Ga0207649_10006795 3300025920 Bacteria 6215
70 Ga0207646_10248695 3300025922 Bacteria 1606
71 Ga0207650_10033539 3300025925 Bacteria 3719
72 Ga0207659_10249833 3300025926 Bacteria 1439
73 Ga0207664_10209885 3300025929 Bacteria 1684
74 Ga0207709_10008985 3300025935 Bacteria 5511
75 Ga0207709_10019565 3300025935 Bacteria 3810
76 Ga0207709_10048277 3300025935 Bacteria 2593
77 Ga0207689_10047779 3300025942 Bacteria 3531
78 Ga0207668_10190525 3300025972 Bacteria 1625
79 Ga0207708_10001456 3300026075 Bacteria 17725
80 Ga0207641_10089441 3300026088 Bacteria 2691
81 Ga0207641_10161114 3300026088 Bacteria 2040
82 Ga0207676_10106081 3300026095 Bacteria 2340
83 Ga0207674_10005990 3300026116 Bacteria 14387
84 Ga0207674_10062646 3300026116 Bacteria 3756
85 Ga0207674_10100802 3300026116 Bacteria 2869
86 Ga0207675_100008597 3300026118 Bacteria 9600
87 Ga0207683_10027267 3300026121 Bacteria 4936
88 Ga0207428_10015490 3300027907 Bacteria 6595
89 Ga0268264_10045981 3300028381 Bacteria 3625
90 Ga0268264_10053621 3300028381 Bacteria 3365
91 Ga0265327_10108479 3300031251 Bacteria 1330
92 Ga0307513_10001160 3300031456 Bacteria 38156
93 Ga0307413_10278587 3300031824 Bacteria 1256
94 Ga0307410_10001303 3300031852 Bacteria 11135
95 Ga0307410_10276441 3300031852 Bacteria 1316
96 Ga0307409_100009436 3300031995 Bacteria 5994
97 Ga0307409_100103384 3300031995 Bacteria 2369
98 Ga0307409_100307530 3300031995 Bacteria 1478
99 Ga0307416_100065366 3300032002 Bacteria 2989
100 Ga0307416_100596562 3300032002 Bacteria 1184
101 Ga0307411_10027054 3300032005 Bacteria 3464
102 Ga0307415_100047814 3300032126 Bacteria 2882
103 Ga0307415_100258707 3300032126 Bacteria 1419
104 Ga0373952_0018324 3300035092 Bacteria 1448
105 Ga0316574_0197631 3300035398 Bacteria 1292
106 Ga0373931_0011355 3300035691 Bacteria 4303
107 Ga0316584_0060946 3300036712 Bacteria 2826
108 Ga0395900_0032031 3300037418 Bacteria 5405
109 Ga0395905_0134245 3300037471 Bacteria 2328
110 Ga0395901_0094041 3300038443 Bacteria 3139
111 Ga0395901_0095843 3300038443 Bacteria 3109
112 Ga0436365_1260380 3300039437 Bacteria 3276
113 Ga0436361_0072893 3300039447 Bacteria 7948
114 Ga0436362_1261218 3300039453 Bacteria 10405
115 Ga0439466_0019319 3300041411 Bacteria 2438
116 Ga0439465_0000167 3300041413 Bacteria 16713
117 Ga0451853_0115815 3300041512 Bacteria 9006
118 Ga0439443_015855 3300042003 Bacteria 1147
119 Ga0439450_010140 3300042008 Bacteria 1809
120 Ga0439446_0040836 3300042156 Bacteria 1366
121 Ga0495630_0253119 3300046517 Bacteria 1346
122 Ga0495656_0008863 3300046615 Bacteria 3609
123 Ga0495611_0078323 3300046648 Bacteria 1517
124 Ga0495613_0009333 3300046689 Bacteria 7280
125 Ga0495581_0075108 3300047315 Bacteria 1956
126 Ga0495676_0073574 3300047321 Bacteria 2620
127 Ga0496102_0289383 3300048905 Bacteria 1544
128 Ga0496104_0032059 3300048907 Bacteria 4890
129 Ga0496104_0123720 3300048907 Bacteria 2483
130 Ga0496104_0238195 3300048907 Bacteria 1732
131 Ga0496104_0510651 3300048907 Bacteria 1113
132 Ga0496105_0220408 3300048908 Bacteria 1544
133 Ga0496108_0008807 3300048911 Bacteria 8179
134 Ga0496108_0030671 3300048911 Bacteria 4455
135 Ga0496108_0042880 3300048911 Bacteria 3778
136 Ga0496108_0287993 3300048911 Bacteria 1430
137 Ga0496109_0014549 3300048912 Bacteria 6845
138 Ga0496109_0026483 3300048912 Bacteria 5172
139 Ga0496109_0070675 3300048912 Bacteria 3204
140 Ga0496110_0037098 3300048913 Bacteria 4235
141 Ga0496110_0082365 3300048913 Bacteria 2870
142 Ga0496110_0182756 3300048913 Bacteria 1904
143 Ga0496110_0250094 3300048913 Bacteria 1613
144 Ga0496111_0004659 3300048914 Bacteria 8688
145 Ga0496111_0113635 3300048914 Bacteria 1995
146 Ga0496111_0245231 3300048914 Unclassified 1330
147 Ga0496113_0101856 3300048916 Bacteria 2226
148 Ga0496113_0181883 3300048916 Bacteria 1667
149 Ga0496113_0320308 3300048916 Bacteria 1243
150 Ga0496114_0054783 3300048917 Bacteria 3325
151 Ga0496114_0261822 3300048917 Bacteria 1523
152 Ga0496115_0040252 3300048918 Bacteria 3715
153 Ga0496115_0397702 3300048918 Bacteria 1118
154 Ga0496126_0222493 3300048929 Bacteria 1585
155 Ga0501031_0047975 3300049568 Bacteria 2784
156 Ga0501031_0249101 3300049568 Bacteria 1155
157 Ga0501032_0010981 3300049569 Bacteria 6511
158 Ga0501034_0000034 3300049571 Bacteria 242608
159 Ga0501034_0050915 3300049571 Bacteria 4176
160 Ga0501036_0037370 3300049572 Bacteria 4108
161 Ga0501037_0036061 3300049573 Bacteria 3646
162 Ga0501037_0060582 3300049573 Bacteria 2760
163 Ga0501038_0028887 3300049574 Bacteria 4922
164 Ga0501038_0084929 3300049574 Bacteria 2663
165 Ga0501038_0236368 3300049574 Bacteria 1452
166 Ga0501039_0007774 3300049575 Bacteria 8178
167 Ga0501039_0108135 3300049575 Bacteria 2173
168 Ga0501040_0037917 3300049576 Bacteria 3276
169 Ga0501040_0236127 3300049576 Bacteria 1302
170 Ga0501041_0003837 3300049577 Bacteria 8653
171 Ga0501041_0074844 3300049577 Bacteria 2081
172 Ga0501042_0005383 3300049578 Bacteria 8235
173 Ga0501042_0044232 3300049578 Bacteria 3172
174 Ga0501042_0135723 3300049578 Bacteria 1774
175 Ga0501043_0225830 3300049579 Bacteria 1447
176 Ga0501046_0380634 3300049580 Bacteria 1021
177 Ga0501047_0097751 3300049581 Bacteria 2814
178 Ga0501048_0006606 3300049582 Bacteria 8812
179 Ga0501048_0064200 3300049582 Bacteria 2597
180 Ga0501048_0081808 3300049582 Bacteria 2278
181 Ga0501068_0018816 3300049584 Bacteria 4002
182 Ga0501068_0253011 3300049584 Bacteria 1123
183 Ga0501069_0060293 3300049585 Bacteria 2118
184 Ga0501070_0019801 3300049586 Bacteria 5643
185 Ga0501070_0188748 3300049586 Bacteria 1694
186 Ga0501071_0000458 3300049587 Bacteria 20560
187 Ga0501071_0366326 3300049587 Bacteria 1098
188 Ga0501072_0048642 3300049588 Bacteria 3339
189 Ga0501072_0099493 3300049588 Bacteria 2311
190 Ga0501073_0013264 3300049589 Bacteria 6004
191 Ga0501074_0005508 3300049590 Bacteria 9110
192 Ga0501074_0031336 3300049590 Bacteria 3853
193 Ga0501074_0100182 3300049590 Bacteria 2074
194 Ga0501075_0226334 3300049591 Bacteria 1426
195 Ga0501076_0000607 3300049592 Bacteria 22907
196 Ga0501076_0156587 3300049592 Bacteria 1855
197 Ga0501077_0004702 3300049593 Bacteria 8300
198 Ga0501077_0006348 3300049593 Bacteria 7244
199 Ga0501079_0039393 3300049741 Bacteria 3645
200 Ga0501080_0051516 3300049742 Bacteria 3830
201 Ga0501080_0055382 3300049742 Bacteria 3694
202 Ga0501080_0070300 3300049742 Bacteria 3255
203 Ga0501080_0200639 3300049742 Bacteria 1832
204 Ga0501080_0359214 3300049742 Bacteria 1314
205 Ga0501081_0023910 3300049743 Bacteria 4099
206 Ga0501081_0032499 3300049743 Bacteria 3540
207 Ga0501081_0102662 3300049743 Bacteria 2023
208 Ga0501081_0142533 3300049743 Bacteria 1718
209 Ga0501081_0216606 3300049743 Bacteria 1392
210 Ga0501083_0026451 3300049744 Bacteria 4010
211 Ga0501083_0096112 3300049744 Bacteria 1955
212 Ga0501044_0128783 3300049823 Bacteria 2526
213 Ga0501045_0125089 3300049824 Bacteria 1910
214 Ga0501045_0148697 3300049824 Bacteria 1742
215 Ga0501045_0353059 3300049824 Bacteria 1094
216 nmdc:mga03n38_24999_c1 3300050490 Bacteria 2447
217 nmdc:mga00v17_19401_c1 3300050491 Bacteria 3881
218 nmdc:mga00v17_8544_c1 3300050491 Bacteria 5512
219 nmdc:mga0yw44_140_c1 3300050492 Bacteria 24799
220 nmdc:mga0yw44_66324_c1 3300050492 Bacteria 2227
221 nmdc:mga05p37_52896_c1 3300050507 Bacteria 4994
222 nmdc:mga0qj67_118303_c1 3300050509 Bacteria 2142
223 nmdc:mga0qj67_352767_c1 3300050509 Bacteria 1189
224 nmdc:mga0qj67_53132_c1 3300050509 Bacteria 3207
225 nmdc:mga06r32_102719_c1 3300050510 Bacteria 2807
226 nmdc:mga06r32_122826_c1 3300050510 Bacteria 2562
227 nmdc:mga06r32_23701_c1 3300050510 Bacteria 5683
228 nmdc:mga06r32_267407_c1 3300050510 Bacteria 1697
229 nmdc:mga06r32_49405_c1 3300050510 Bacteria 4022
230 nmdc:mga08y16_140407_c1 3300050511 Bacteria 2512
231 nmdc:mga0sz30_48039_c1 3300050516 Bacteria 1804
232 Ga0495601_0087594 3300053077 Bacteria 2002
233 Ga0495619_0037210 3300053085 Bacteria 3170
234 Ga0500616_0000040 3300053153 Bacteria 367604
235 Ga0500616_0000723 3300053153 Bacteria 38145
236 Ga0501084_0072757 3300054114 Bacteria 2879
237 Ga0501084_0095879 3300054114 Bacteria 2491
238 Ga0530510_0015728 3300061734 Bacteria 5348
239 Ga0530510_0023382 3300061734 Bacteria 4404
240 Ga0530510_0024136 3300061734 Bacteria 4337
241 Ga0530510_0052856 3300061734 Bacteria 2935
242 2515851462 2515154155 Bacteria 7985436
243 2644112855 2643221619 Bacteria 4158469
244 2644633974 2643221715 Bacteria 6671032
245 2676492538 2675903060 Bacteria 10051191
246 2816509932 2816332139 Bacteria 9138787
247 2902810893 2902810491 Bacteria 6794147
248 2919399431 2919395869 Bacteria 3704152
249 2939585706 2939582691 Bacteria 7088898
250 nmdc:mga09592_27321_c1
251 JGI24033J26618_1005052
252 JGI24751J29686_10000332
253 JGI24751J29686_10014959
254 JGI25164J39214_1000876
255 Ga0070670_100193427
256 Ga0070661_100008761
257 Ga0070675_100045620
258 Ga0070659_100103030
259 Ga0070709_10345474
260 Ga0070714_100001189
261 Ga0070700_100033761
262 Ga0070694_100141060
263 Ga0070708_100063044
264 Ga0070663_100093702
265 Ga0070678_100145525
266 Ga0070678_100156590
267 Ga0070681_10022186
268 Ga0070681_10071203
269 Ga0070684_100020585
270 Ga0070664_100013289
271 Ga0068857_100088277
272 Ga0068856_100200893
273 Ga0068864_100003395
274 Ga0068864_100065222
275 Ga0068870_10010154
276 Ga0068863_100004321
277 Ga0068858_100023031
278 Ga0068860_100060617
279 Ga0081455_10020151
280 Ga0081539_10005930
281 Ga0081539_10006633
282 Ga0075365_10001779
283 Ga0075365_10151869
284 Ga0075364_10011467
285 Ga0075364_10046269
286 Ga0075432_10010151
287 Ga0075369_10112237
288 Ga0075428_100006713
289 Ga0075428_100121647
290 Ga0075428_100346090
291 Ga0075430_100068713
292 Ga0075430_100070443
293 Ga0075430_100127800
294 Ga0075430_100307986
295 Ga0075431_100022107
296 Ga0075431_100023447
297 Ga0075431_100130865
298 Ga0075431_100307157
299 Ga0075434_100027763
300 Ga0075429_100015361
301 Ga0075429_100245837
302 Ga0105247_10094106
303 Ga0114129_10023505
304 Ga0105243_10034065
305 Ga0105243_10115947
306 Ga0105248_10008865
307 Ga0163163_10001857
308 Ga0163163_10031696
309 Ga0163163_10220828
310 Ga0157379_10305651
311 Ga0213873_10012883
312 Ga0207427_100052
313 Ga0209437_100451
314 Ga0209233_1000001
315 Ga0207643_10000127
316 Ga0207684_10175448
317 Ga0207707_10081966
318 Ga0207649_10006795
319 Ga0207646_10248695
320 Ga0207650_10033539
321 Ga0207659_10249833
322 Ga0207664_10209885
323 Ga0207709_10008985
324 Ga0207709_10019565
325 Ga0207709_10048277
326 Ga0207689_10047779
327 Ga0207668_10190525
328 Ga0207708_10001456
329 Ga0207641_10089441
330 Ga0207641_10161114
331 Ga0207676_10106081
332 Ga0207674_10005990
333 Ga0207674_10062646
334 Ga0207674_10100802
335 Ga0207675_100008597
336 Ga0207683_10027267
337 Ga0207428_10015490
338 Ga0268264_10045981
339 Ga0268264_10053621
340 Ga0265327_10108479
341 Ga0307513_10001160
342 Ga0307413_10278587
343 Ga0307410_10001303
344 Ga0307410_10276441
345 Ga0307409_100009436
346 Ga0307409_100103384
347 Ga0307409_100307530
348 Ga0307416_100065366
349 Ga0307416_100596562
350 Ga0307411_10027054
351 Ga0307415_100047814
352 Ga0307415_100258707
353 Ga0373952_0018324
354 Ga0316574_0197631
355 Ga0373931_0011355
356 Ga0316584_0060946
357 Ga0395900_0032031
358 Ga0395905_0134245
359 Ga0395901_0094041
360 Ga0395901_0095843
361 Ga0436365_1260380
362 Ga0436361_0072893
363 Ga0436362_1261218
364 Ga0439466_0019319
365 Ga0439465_0000167
366 Ga0451853_0115815
367 Ga0439443_015855
368 Ga0439450_010140
369 Ga0439446_0040836
370 Ga0495630_0253119
371 Ga0495656_0008863
372 Ga0495611_0078323
373 Ga0495613_0009333
374 Ga0495581_0075108
375 Ga0495676_0073574
376 Ga0496102_0289383
377 Ga0496104_0032059
378 Ga0496104_0123720
379 Ga0496104_0238195
380 Ga0496104_0510651
381 Ga0496105_0220408
382 Ga0496108_0008807
383 Ga0496108_0030671
384 Ga0496108_0042880
385 Ga0496108_0287993
386 Ga0496109_0014549
387 Ga0496109_0026483
388 Ga0496109_0070675
389 Ga0496110_0037098
390 Ga0496110_0082365
391 Ga0496110_0182756
392 Ga0496110_0250094
393 Ga0496111_0004659
394 Ga0496111_0113635
395 Ga0496111_0245231
396 Ga0496113_0101856
397 Ga0496113_0181883
398 Ga0496113_0320308
399 Ga0496114_0054783
400 Ga0496114_0261822
401 Ga0496115_0040252
402 Ga0496115_0397702
403 Ga0496126_0222493
404 Ga0501031_0047975
405 Ga0501031_0249101
406 Ga0501032_0010981
407 Ga0501034_0000034
408 Ga0501034_0050915
409 Ga0501036_0037370
410 Ga0501037_0036061
411 Ga0501037_0060582
412 Ga0501038_0028887
413 Ga0501038_0084929
414 Ga0501038_0236368
415 Ga0501039_0007774
416 Ga0501039_0108135
417 Ga0501040_0037917
418 Ga0501040_0236127
419 Ga0501041_0003837
420 Ga0501041_0074844
421 Ga0501042_0005383
422 Ga0501042_0044232
423 Ga0501042_0135723
424 Ga0501043_0225830
425 Ga0501046_0380634
426 Ga0501047_0097751
427 Ga0501048_0006606
428 Ga0501048_0064200
429 Ga0501048_0081808
430 Ga0501068_0018816
431 Ga0501068_0253011
432 Ga0501069_0060293
433 Ga0501070_0019801
434 Ga0501070_0188748
435 Ga0501071_0000458
436 Ga0501071_0366326
437 Ga0501072_0048642
438 Ga0501072_0099493
439 Ga0501073_0013264
440 Ga0501074_0005508
441 Ga0501074_0031336
442 Ga0501074_0100182
443 Ga0501075_0226334
444 Ga0501076_0000607
445 Ga0501076_0156587
446 Ga0501077_0004702
447 Ga0501077_0006348
448 Ga0501079_0039393
449 Ga0501080_0051516
450 Ga0501080_0055382
451 Ga0501080_0070300
452 Ga0501080_0200639
453 Ga0501080_0359214
454 Ga0501081_0023910
455 Ga0501081_0032499
456 Ga0501081_0102662
457 Ga0501081_0142533
458 Ga0501081_0216606
459 Ga0501083_0026451
460 Ga0501083_0096112
461 Ga0501044_0128783
462 Ga0501045_0125089
463 Ga0501045_0148697
464 Ga0501045_0353059
465 nmdc:mga03n38_24999_c1
466 nmdc:mga00v17_19401_c1
467 nmdc:mga00v17_8544_c1
468 nmdc:mga0yw44_140_c1
469 nmdc:mga0yw44_66324_c1
470 nmdc:mga05p37_52896_c1
471 nmdc:mga0qj67_118303_c1
472 nmdc:mga0qj67_352767_c1
473 nmdc:mga0qj67_53132_c1
474 nmdc:mga06r32_102719_c1
475 nmdc:mga06r32_122826_c1
476 nmdc:mga06r32_23701_c1
477 nmdc:mga06r32_267407_c1
478 nmdc:mga06r32_49405_c1
479 nmdc:mga08y16_140407_c1
480 nmdc:mga0sz30_48039_c1
481 Ga0495601_0087594
482 Ga0495619_0037210
483 Ga0500616_0000040
484 Ga0500616_0000723
485 Ga0501084_0072757
486 Ga0501084_0095879
487 Ga0530510_0015728
488 Ga0530510_0023382
489 Ga0530510_0024136
490 Ga0530510_0052856
491 2515851462
492 2644112855
493 2644633974
494 2676492538
495 2816509932
496 2902810893
497 2919399431
498 2939585706

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13280

WYL

WYL domain

181

355

0.94

PF08220

HTH_DeoR

DeoR-like helix-turn-helix domain

50

97

0.91

PF08279

HTH_11

HTH domain

50

104

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
7bc4-assembly1.cif.gz_A cryo-em structure of fatty acid synthase (fas) from pichia pastoris 0.7314 216 255
6xyw-assembly1.cif.gz_Ap structure of the plant mitochondrial ribosome 0.716 129 190
6qmm-assembly1.cif.gz_B crystal structure of synecochoccus spermidine synthase in complex with putrescine, spermidine and mta 0.7082 133 176
4noy-assembly1.cif.gz_A crystal structure of listeria monocytogenes hfq f43w 0.6874 112 190
4noy-assembly1.cif.gz_A crystal structure of listeria monocytogenes hfq f43w 0.6792 112 190
ID Description Score Start End Superfamily
af_Q2FVV6_1_65_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8538 1 45 1.10.10.10
af_P52133_127_211_2.30.29.30 Mainly Beta;Roll;PH-domain like;Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.8002 119 204 2.30.29.30
af_Q2FYW7_1_63_2.30.30.100 Mainly Beta;Roll;SH3 type barrels.; 0.7882 129 184 2.30.30.100
2wbmB03 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.7265 214 273 3.30.70.240
af_P52133_127_211_2.30.29.30 Mainly Beta;Roll;PH-domain like;Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.7233 119 204 2.30.29.30
ID Description Score Start End GO Terms
AF-A0A7X9Q3H5-F1-model_v4 WYL domain-containing protein 0.9171 187 293
AF-A0A7X9Q3H5-F1-model_v4 WYL domain-containing protein 0.8784 187 293
AF-A0A4R6EVE4-F1-model_v4 HTH domain-containing protein 0.8074 119 294
AF-A0A4D4KPB5-F1-model_v4 WYL domain-containing protein 0.7972 118 301
AF-A0A6P1BXV4-F1-model_v4 WYL domain-containing protein 0.7877 130 301

Map