F361110

General Info

Members Datasets Scaffolds Average Seq Length
249 189 498 372

Family's Representative Sequence

Representative Sequence 3300049742|Ga0501080_0001247|Ga0501080_0001247_11869_13104
Length 411
Sequence MSDDIIRLKDNDVLRVAATAIRTETPVTFSQAAAPRRTTMVNFAVSDEQIELRRSVRRFFGEKSGSADVRRAMGSSEGYDEKTWQMMAEQLGLTGLAIPEEYGGSGYGYVELAVVFEEAGAALLCSPLFASVALAANALLESDDDEAKASYLPRIAAGELTATLAFTEDGGRWEPDATTLTAVHAGGEWRLSGHKSFVIDGHTADLILVVGRTDTGLGLFAVAGDATGLERRALPTMDQTRKQARLTFADTPARLVGQARDAAAILERTLDLAAVALAAEATGGAQRCLDLAVQYAKERIQFGRPIGSFQAIKHKCSDMFLEVESARSAAYAAASEAADGSTELAAAASLAKAYCTDAFFNTAAENIQIHGGIGFTWEHDAHLYFKRAKSSQLLLGDPSYHRERVAQLIGI

Samples

Sample ID Description Type Environment
1 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
2 3300004798 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
6 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
10 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
11 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
20 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
24 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
25 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
26 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
27 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
28 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
29 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
30 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
31 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
32 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
33 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
34 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
35 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
36 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
38 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
40 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
41 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
44 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
45 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
46 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
47 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
48 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
49 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
50 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
51 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
52 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
53 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
54 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
55 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
56 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
75 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
76 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
77 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
78 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
79 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
80 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
81 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
82 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
83 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
84 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
85 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
86 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
87 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
88 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
89 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
90 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
91 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
92 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
93 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
94 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
95 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
96 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
97 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
98 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
99 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
100 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
101 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
102 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
103 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
104 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
105 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
106 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
107 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
108 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
109 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
110 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
111 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
112 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
113 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
114 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
115 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
116 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
117 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
118 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
119 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
120 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
121 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
122 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
123 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
124 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
125 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
126 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
127 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
128 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
129 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
130 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
131 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
132 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
133 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
134 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
135 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
136 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
137 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
138 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
139 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
140 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
141 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
142 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
143 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
144 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
145 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
146 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
147 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
148 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
149 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
150 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
151 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
152 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
153 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
154 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
155 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
156 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
157 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
158 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
159 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
160 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
161 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
162 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
163 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
164 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
165 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
166 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
167 3300053143 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 endosphere Metagenome Endosphere
168 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
169 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
170 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
171 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
172 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
173 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
174 2508501039 Frankia saprophytica CN3 Isolate Nodule
175 2558860112 Pseudonocardia acaciae DSM 45401 Isolate Unclassified
176 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
177 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
178 2643221647 Streptomyces sp. Root369 Isolate Unclassified
179 2671180195 Frankia sp. CcI49 Isolate Nodule
180 2675902999 Frankia asymbiotica NRRL B-16386 Isolate Nodule
181 2687453737 Frankia sp. BMG5.36 Isolate Nodule
182 2773857921 Frankia asymbiotica NRRL B-16386 Isolate Nodule
183 2773857922 Frankia sp. CcI49 Isolate Nodule
184 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
185 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
186 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
187 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
188 8002775197 Frankia nepalensis CN7 Isolate Nodule
189 8002784119 Frankia sp. AgB1.9 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 91.16
Metatranscriptomes 2.41
Isolates 6.43

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.42
Nodule 3.21
Rhizoplane 3.61
Rhizosphere 80.72
Stem 0
Stem Tuber 0
Unclassified 1.61

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501080_0001247 3300049742 Bacteria 21190
2 Ga0058859_11753223 3300004798 Unclassified 1629
3 Ga0070658_10002079 3300005327 Bacteria 16808
4 Ga0070658_10015359 3300005327 Bacteria 6128
5 Ga0070680_100000457 3300005336 Bacteria 27798
6 Ga0070680_100001580 3300005336 Bacteria 16617
7 Ga0070680_100048262 3300005336 Bacteria 3469
8 Ga0070675_100079413 3300005354 Bacteria 2734
9 Ga0070671_100088356 3300005355 Bacteria 2594
10 Ga0070714_100071172 3300005435 Bacteria 3006
11 Ga0070714_100255986 3300005435 Bacteria 1620
12 Ga0070714_100273763 3300005435 Bacteria 1566
13 Ga0070713_100002497 3300005436 Bacteria 12015
14 Ga0070700_100099642 3300005441 Unclassified 1912
15 Ga0070708_100000196 3300005445 Bacteria 44168
16 Ga0070708_100012352 3300005445 Bacteria 6966
17 Ga0070662_100199408 3300005457 Bacteria 1587
18 Ga0070681_10000016 3300005458 Bacteria 126919
19 Ga0070681_10003390 3300005458 Bacteria 14911
20 Ga0070681_10016116 3300005458 Bacteria 7450
21 Ga0070706_100206354 3300005467 Bacteria 1835
22 Ga0070707_100012461 3300005468 Bacteria 7942
23 Ga0070707_100097997 3300005468 Bacteria 2840
24 Ga0070698_100001250 3300005471 Bacteria 28390
25 Ga0070698_100390369 3300005471 Bacteria 1325
26 Ga0070699_100000364 3300005518 Bacteria 44307
27 Ga0070679_100000105 3300005530 Bacteria 65645
28 Ga0070679_100002874 3300005530 Bacteria 15658
29 Ga0070679_100041185 3300005530 Bacteria 4597
30 Ga0070684_100253493 3300005535 Bacteria 1609
31 Ga0070697_100169426 3300005536 Bacteria 1847
32 Ga0070696_100157207 3300005546 Bacteria 1673
33 Ga0070665_100067104 3300005548 Bacteria 3598
34 Ga0070665_100310806 3300005548 Bacteria 1580
35 Ga0068855_100327779 3300005563 Bacteria 1691
36 Ga0068859_100012738 3300005617 Bacteria 8451
37 Ga0068863_100000809 3300005841 Bacteria 31379
38 Ga0068858_100066557 3300005842 Bacteria 3336
39 Ga0068860_100224249 3300005843 Bacteria 1825
40 Ga0068862_100000100 3300005844 Bacteria 103461
41 Ga0081539_10033942 3300005985 Bacteria 3097
42 Ga0070717_10038937 3300006028 Bacteria 3866
43 Ga0070716_100050194 3300006173 Bacteria 2367
44 Ga0070712_100055655 3300006175 Bacteria 2771
45 Ga0075428_100000006 3300006844 Bacteria 288592
46 Ga0075433_10133336 3300006852 Bacteria 2207
47 Ga0075433_10204425 3300006852 Bacteria 1756
48 Ga0075434_100109476 3300006871 Bacteria 2773
49 Ga0075434_100184247 3300006871 Bacteria 2108
50 Ga0075436_100068596 3300006914 Bacteria 2450
51 Ga0075436_100076011 3300006914 Bacteria 2325
52 Ga0097620_100012738 3300006931 Bacteria 8451
53 Ga0075435_100023277 3300007076 Bacteria 4788
54 Ga0075435_100244235 3300007076 Bacteria 1528
55 Ga0111539_10249684 3300009094 Bacteria 2066
56 Ga0105245_10347842 3300009098 Bacteria 1468
57 Ga0105247_10120822 3300009101 Bacteria 1697
58 Ga0105242_10109516 3300009176 Bacteria 2352
59 Ga0105248_10107419 3300009177 Bacteria 3147
60 Ga0105238_10004101 3300009551 Bacteria 14456
61 Ga0105239_10019452 3300010375 Bacteria 7496
62 Ga0157369_10095182 3300013105 Bacteria 3178
63 Ga0157374_10027164 3300013296 Bacteria 5158
64 Ga0163163_10078147 3300014325 Bacteria 3305
65 Ga0157376_10150697 3300014969 Bacteria 2097
66 Ga0163161_10179787 3300017792 Unclassified 1621
67 Ga0206356_11115703 3300020070 Bacteria 2016
68 Ga0206354_10915900 3300020081 Bacteria 15182
69 Ga0206353_10366381 3300020082 Bacteria 7894
70 Ga0206353_10619366 3300020082 Bacteria 20786
71 Ga0213876_10005655 3300021384 Bacteria 6862
72 Ga0224712_10011722 3300022467 Bacteria 2731
73 Ga0224572_1000124 3300024225 Bacteria 6282
74 Ga0207688_10083664 3300025901 Unclassified 1825
75 Ga0207699_10103730 3300025906 Bacteria 1809
76 Ga0207705_10000209 3300025909 Bacteria 59476
77 Ga0207705_10000597 3300025909 Bacteria 30220
78 Ga0207705_10003651 3300025909 Bacteria 11714
79 Ga0207707_10000027 3300025912 Bacteria 171601
80 Ga0207707_10011354 3300025912 Bacteria 7755
81 Ga0207695_10182449 3300025913 Bacteria 2019
82 Ga0207660_10000164 3300025917 Bacteria 41667
83 Ga0207660_10001078 3300025917 Bacteria 18147
84 Ga0207652_10000217 3300025921 Bacteria 60702
85 Ga0207652_10000702 3300025921 Bacteria 32441
86 Ga0207646_10024754 3300025922 Bacteria 5495
87 Ga0207646_10203957 3300025922 Bacteria 1786
88 Ga0207694_10003191 3300025924 Bacteria 13083
89 Ga0207664_10124062 3300025929 Bacteria 2166
90 Ga0207686_10277088 3300025934 Bacteria 1236
91 Ga0207669_10170325 3300025937 Bacteria 1549
92 Ga0207665_10120166 3300025939 Bacteria 1855
93 Ga0207661_10143031 3300025944 Bacteria 2060
94 Ga0207677_10047542 3300026023 Bacteria 2882
95 Ga0207676_10286066 3300026095 Bacteria 1499
96 Ga0268266_10003094 3300028379 Bacteria 16969
97 Ga0268265_10000110 3300028380 Bacteria 103447
98 Ga0265330_10004810 3300031235 Bacteria 6809
99 Ga0265330_10018984 3300031235 Bacteria 3155
100 Ga0265332_10000059 3300031238 Bacteria 99723
101 Ga0265328_10000685 3300031239 Bacteria 15740
102 Ga0265320_10009553 3300031240 Bacteria 5842
103 Ga0265320_10016453 3300031240 Bacteria 4144
104 Ga0265329_10005572 3300031242 Bacteria 5073
105 Ga0265329_10015258 3300031242 Bacteria 2687
106 Ga0265331_10000153 3300031250 Bacteria 87835
107 Ga0265331_10065493 3300031250 Bacteria 1708
108 Ga0265316_10000066 3300031344 Bacteria 110650
109 Ga0307513_10052888 3300031456 Bacteria 4369
110 Ga0307509_10234995 3300031507 Bacteria 1632
111 Ga0307514_10001125 3300031649 Bacteria 37028
112 Ga0265314_10000312 3300031711 Bacteria 69045
113 Ga0265342_10003913 3300031712 Bacteria 11962
114 Ga0307507_10000090 3300033179 Bacteria 142457
115 Ga0307510_10000524 3300033180 Bacteria 38226
116 Ga0373929_0007102 3300035085 Bacteria 2038
117 Ga0373934_0021628 3300035086 Bacteria 2478
118 Ga0373923_0014526 3300035111 Bacteria 2959
119 Ga0373923_0099903 3300035111 Bacteria 1278
120 Ga0373932_0001288 3300035112 Bacteria 7096
121 Ga0373953_0021639 3300035117 Bacteria 2416
122 Ga0373954_0132797 3300035118 Bacteria 1212
123 Ga0373956_0002653 3300035119 Bacteria 7244
124 Ga0373955_0120967 3300035172 Bacteria 1522
125 Ga0316574_0209537 3300035398 Bacteria 1251
126 Ga0373931_0000021 3300035691 Bacteria 142586
127 Ga0373933_0092325 3300035724 Bacteria 1869
128 Ga0373933_0110799 3300035724 Bacteria 1712
129 Ga0373937_0008303 3300036401 Bacteria 9015
130 Ga0373937_0110335 3300036401 Bacteria 2558
131 Ga0373925_0240481 3300037068 Bacteria 1450
132 Ga0395899_0110695 3300037312 Bacteria 1975
133 Ga0436364_0209316 3300037853 Bacteria 3868
134 Ga0436364_0984655 3300037853 Bacteria 26869
135 Ga0395901_0001242 3300038443 Bacteria 27223
136 Ga0436365_1480307 3300039437 Bacteria 4103
137 Ga0436365_1759272 3300039437 Bacteria 18178
138 Ga0451853_1258132 3300041512 Bacteria 2933
139 Ga0439435_0007670 3300042436 Bacteria 2479
140 Ga0466969_0005967 3300044656 Bacteria 6482
141 Ga0466972_0019019 3300044658 Bacteria 3434
142 Ga0466965_0000813 3300044683 Bacteria 11773
143 Ga0466966_0000823 3300044684 Bacteria 19761
144 Ga0466961_0001980 3300044693 Bacteria 12743
145 Ga0466961_0112521 3300044693 Bacteria 1712
146 Ga0466963_0000120 3300044694 Bacteria 29251
147 Ga0466963_0021417 3300044694 Bacteria 4078
148 Ga0466963_0209714 3300044694 Bacteria 1363
149 Ga0466971_0001804 3300044719 Bacteria 9086
150 Ga0466971_0011283 3300044719 Bacteria 3915
151 Ga0466970_0000653 3300044765 Bacteria 17057
152 Ga0466957_0000565 3300044842 Bacteria 18681
153 Ga0466957_0005044 3300044842 Bacteria 7391
154 Ga0466957_0061107 3300044842 Bacteria 2311
155 Ga0466959_0022197 3300045049 Bacteria 4689
156 Ga0466958_0000064 3300045836 Bacteria 31891
157 Ga0466958_0002742 3300045836 Bacteria 8940
158 Ga0466967_0000207 3300045976 Bacteria 24750
159 Ga0466967_0051087 3300045976 Bacteria 3622
160 Ga0466967_0119119 3300045976 Bacteria 2436
161 Ga0466967_0259136 3300045976 Bacteria 1664
162 Ga0495651_0003458 3300046462 Bacteria 12107
163 Ga0495653_0028239 3300046463 Bacteria 4487
164 Ga0495662_0021096 3300046476 Bacteria 3151
165 Ga0495618_0020113 3300046514 Bacteria 4109
166 Ga0495628_0001002 3300046516 Bacteria 25841
167 Ga0495628_0053651 3300046516 Bacteria 3180
168 Ga0495632_0037793 3300046519 Bacteria 2447
169 Ga0495643_0005262 3300046522 Bacteria 8794
170 Ga0495665_0012643 3300046531 Bacteria 4570
171 Ga0495640_0031186 3300046533 Bacteria 3806
172 Ga0495587_0002148 3300046536 Bacteria 13185
173 Ga0495645_0013510 3300046543 Bacteria 5776
174 Ga0495645_0018627 3300046543 Bacteria 4988
175 Ga0495633_0018155 3300046558 Bacteria 3578
176 Ga0495667_0002633 3300046559 Bacteria 11985
177 Ga0495634_0040985 3300046642 Bacteria 3146
178 Ga0495625_0091386 3300046660 Bacteria 2104
179 Ga0495635_0050220 3300046663 Bacteria 2875
180 Ga0495658_0094278 3300046683 Bacteria 1778
181 Ga0495624_0075903 3300046690 Bacteria 2086
182 Ga0495660_0067314 3300046810 Bacteria 1908
183 Ga0495680_0005466 3300047322 Bacteria 11952
184 Ga0495675_0024137 3300047444 Bacteria 3876
185 Ga0495685_001446 3300047447 Bacteria 7271
186 Ga0495685_025289 3300047447 Bacteria 2043
187 Ga0495684_0001107 3300047471 Bacteria 21691
188 Ga0495602_0051748 3300048088 Bacteria 3655
189 Ga0496100_0179289 3300048903 Bacteria 1531
190 Ga0496102_0298237 3300048905 Bacteria 1519
191 Ga0496104_0078097 3300048907 Bacteria 3154
192 Ga0496104_0168209 3300048907 Bacteria 2102
193 Ga0496105_0020672 3300048908 Bacteria 5321
194 Ga0496110_0010983 3300048913 Bacteria 7388
195 Ga0496110_0066031 3300048913 Bacteria 3199
196 Ga0496114_0040092 3300048917 Bacteria 3876
197 Ga0496114_0041487 3300048917 Bacteria 3814
198 Ga0496118_0117692 3300048921 Bacteria 1742
199 Ga0496126_0000036 3300048929 Bacteria 354901
200 Ga0496126_0009682 3300048929 Bacteria 10212
201 Ga0496126_0185967 3300048929 Bacteria 1762
202 Ga0501070_0053319 3300049586 Bacteria 3355
203 Ga0501070_0103341 3300049586 Bacteria 2356
204 Ga0501073_0093395 3300049589 Bacteria 2090
205 Ga0501073_0116704 3300049589 Bacteria 1850
206 Ga0501074_0030640 3300049590 Bacteria 3898
207 Ga0501079_0001072 3300049741 Bacteria 19032
208 Ga0501080_0057414 3300049742 Bacteria 3624
209 Ga0501080_0185758 3300049742 Bacteria 1911
210 Ga0501044_0118816 3300049823 Bacteria 2646
211 nmdc:mga03n38_45336_c1 3300050490 Bacteria 1935
212 nmdc:mga0yw44_92241_c1 3300050492 Bacteria 1916
213 nmdc:mga05p37_297598_c1 3300050507 Bacteria 1918
214 nmdc:mga05p37_353474_c1 3300050507 Bacteria 1730
215 nmdc:mga08y16_333796_c1 3300050511 Bacteria 1559
216 nmdc:mga0n895_134769_c1 3300050512 Bacteria 2496
217 nmdc:mga0n895_276207_c1 3300050512 Bacteria 1704
218 nmdc:mga0rr50_24898_c1 3300050513 Bacteria 4153
219 nmdc:mga0rr50_50085_c1 3300050513 Bacteria 3094
220 nmdc:mga0sz30_1828_c1 3300050516 Bacteria 7574
221 Ga0495612_0043149 3300053078 Bacteria 1842
222 Ga0500595_004730 3300053119 Bacteria 6044
223 Ga0500652_002042 3300053131 Bacteria 6078
224 Ga0500658_0004053 3300053134 Bacteria 5505
225 Ga0500579_050018 3300053143 Bacteria 2562
226 Ga0500588_0050578 3300053146 Bacteria 1293
227 Ga0500600_0061992 3300053149 Bacteria 2081
228 Ga0500633_0004497 3300053160 Bacteria 3207
229 Ga0500587_002298 3300053739 Bacteria 2724
230 Ga0501084_0052809 3300054114 Bacteria 3400
231 Ga0466962_0001838 3300061719 Bacteria 9985
232 Ga0466962_0028842 3300061719 Bacteria 2658
233 Ga0466962_0039903 3300061719 Bacteria 2247
234 2508676748 2508501039 Bacteria 9978592
235 2558909184 2558860112 Bacteria 9931328
236 2585309539 2582581313 Bacteria 10042643
237 2585318080 2582581314 Bacteria 11452267
238 2644266555 2643221647 Bacteria 10741251
239 2671833403 2671180195 Bacteria 9757215
240 2676204212 2675902999 Bacteria 9438463
241 2689960688 2687453737 Bacteria 11203906
242 2774848788 2773857921 Bacteria 9435764
243 2774851559 2773857922 Bacteria 9757215
244 2816504958 2816332139 Bacteria 9138787
245 2954692312 2954691527 Bacteria 10720516
246 2954707378 2954701450 Bacteria 10834262
247 3003000673 3002998708 Bacteria 11715108
248 8002783570 8002775197 Bacteria 10728764
249 8002786720 8002784119 Bacteria 9788632
250 Ga0501080_0001247
251 Ga0058859_11753223
252 Ga0070658_10002079
253 Ga0070658_10015359
254 Ga0070680_100000457
255 Ga0070680_100001580
256 Ga0070680_100048262
257 Ga0070675_100079413
258 Ga0070671_100088356
259 Ga0070714_100071172
260 Ga0070714_100255986
261 Ga0070714_100273763
262 Ga0070713_100002497
263 Ga0070700_100099642
264 Ga0070708_100000196
265 Ga0070708_100012352
266 Ga0070662_100199408
267 Ga0070681_10000016
268 Ga0070681_10003390
269 Ga0070681_10016116
270 Ga0070706_100206354
271 Ga0070707_100012461
272 Ga0070707_100097997
273 Ga0070698_100001250
274 Ga0070698_100390369
275 Ga0070699_100000364
276 Ga0070679_100000105
277 Ga0070679_100002874
278 Ga0070679_100041185
279 Ga0070684_100253493
280 Ga0070697_100169426
281 Ga0070696_100157207
282 Ga0070665_100067104
283 Ga0070665_100310806
284 Ga0068855_100327779
285 Ga0068859_100012738
286 Ga0068863_100000809
287 Ga0068858_100066557
288 Ga0068860_100224249
289 Ga0068862_100000100
290 Ga0081539_10033942
291 Ga0070717_10038937
292 Ga0070716_100050194
293 Ga0070712_100055655
294 Ga0075428_100000006
295 Ga0075433_10133336
296 Ga0075433_10204425
297 Ga0075434_100109476
298 Ga0075434_100184247
299 Ga0075436_100068596
300 Ga0075436_100076011
301 Ga0097620_100012738
302 Ga0075435_100023277
303 Ga0075435_100244235
304 Ga0111539_10249684
305 Ga0105245_10347842
306 Ga0105247_10120822
307 Ga0105242_10109516
308 Ga0105248_10107419
309 Ga0105238_10004101
310 Ga0105239_10019452
311 Ga0157369_10095182
312 Ga0157374_10027164
313 Ga0163163_10078147
314 Ga0157376_10150697
315 Ga0163161_10179787
316 Ga0206356_11115703
317 Ga0206354_10915900
318 Ga0206353_10366381
319 Ga0206353_10619366
320 Ga0213876_10005655
321 Ga0224712_10011722
322 Ga0224572_1000124
323 Ga0207688_10083664
324 Ga0207699_10103730
325 Ga0207705_10000209
326 Ga0207705_10000597
327 Ga0207705_10003651
328 Ga0207707_10000027
329 Ga0207707_10011354
330 Ga0207695_10182449
331 Ga0207660_10000164
332 Ga0207660_10001078
333 Ga0207652_10000217
334 Ga0207652_10000702
335 Ga0207646_10024754
336 Ga0207646_10203957
337 Ga0207694_10003191
338 Ga0207664_10124062
339 Ga0207686_10277088
340 Ga0207669_10170325
341 Ga0207665_10120166
342 Ga0207661_10143031
343 Ga0207677_10047542
344 Ga0207676_10286066
345 Ga0268266_10003094
346 Ga0268265_10000110
347 Ga0265330_10004810
348 Ga0265330_10018984
349 Ga0265332_10000059
350 Ga0265328_10000685
351 Ga0265320_10009553
352 Ga0265320_10016453
353 Ga0265329_10005572
354 Ga0265329_10015258
355 Ga0265331_10000153
356 Ga0265331_10065493
357 Ga0265316_10000066
358 Ga0307513_10052888
359 Ga0307509_10234995
360 Ga0307514_10001125
361 Ga0265314_10000312
362 Ga0265342_10003913
363 Ga0307507_10000090
364 Ga0307510_10000524
365 Ga0373929_0007102
366 Ga0373934_0021628
367 Ga0373923_0014526
368 Ga0373923_0099903
369 Ga0373932_0001288
370 Ga0373953_0021639
371 Ga0373954_0132797
372 Ga0373956_0002653
373 Ga0373955_0120967
374 Ga0316574_0209537
375 Ga0373931_0000021
376 Ga0373933_0092325
377 Ga0373933_0110799
378 Ga0373937_0008303
379 Ga0373937_0110335
380 Ga0373925_0240481
381 Ga0395899_0110695
382 Ga0436364_0209316
383 Ga0436364_0984655
384 Ga0395901_0001242
385 Ga0436365_1480307
386 Ga0436365_1759272
387 Ga0451853_1258132
388 Ga0439435_0007670
389 Ga0466969_0005967
390 Ga0466972_0019019
391 Ga0466965_0000813
392 Ga0466966_0000823
393 Ga0466961_0001980
394 Ga0466961_0112521
395 Ga0466963_0000120
396 Ga0466963_0021417
397 Ga0466963_0209714
398 Ga0466971_0001804
399 Ga0466971_0011283
400 Ga0466970_0000653
401 Ga0466957_0000565
402 Ga0466957_0005044
403 Ga0466957_0061107
404 Ga0466959_0022197
405 Ga0466958_0000064
406 Ga0466958_0002742
407 Ga0466967_0000207
408 Ga0466967_0051087
409 Ga0466967_0119119
410 Ga0466967_0259136
411 Ga0495651_0003458
412 Ga0495653_0028239
413 Ga0495662_0021096
414 Ga0495618_0020113
415 Ga0495628_0001002
416 Ga0495628_0053651
417 Ga0495632_0037793
418 Ga0495643_0005262
419 Ga0495665_0012643
420 Ga0495640_0031186
421 Ga0495587_0002148
422 Ga0495645_0013510
423 Ga0495645_0018627
424 Ga0495633_0018155
425 Ga0495667_0002633
426 Ga0495634_0040985
427 Ga0495625_0091386
428 Ga0495635_0050220
429 Ga0495658_0094278
430 Ga0495624_0075903
431 Ga0495660_0067314
432 Ga0495680_0005466
433 Ga0495675_0024137
434 Ga0495685_001446
435 Ga0495685_025289
436 Ga0495684_0001107
437 Ga0495602_0051748
438 Ga0496100_0179289
439 Ga0496102_0298237
440 Ga0496104_0078097
441 Ga0496104_0168209
442 Ga0496105_0020672
443 Ga0496110_0010983
444 Ga0496110_0066031
445 Ga0496114_0040092
446 Ga0496114_0041487
447 Ga0496118_0117692
448 Ga0496126_0000036
449 Ga0496126_0009682
450 Ga0496126_0185967
451 Ga0501070_0053319
452 Ga0501070_0103341
453 Ga0501073_0093395
454 Ga0501073_0116704
455 Ga0501074_0030640
456 Ga0501079_0001072
457 Ga0501080_0057414
458 Ga0501080_0185758
459 Ga0501044_0118816
460 nmdc:mga03n38_45336_c1
461 nmdc:mga0yw44_92241_c1
462 nmdc:mga05p37_297598_c1
463 nmdc:mga05p37_353474_c1
464 nmdc:mga08y16_333796_c1
465 nmdc:mga0n895_134769_c1
466 nmdc:mga0n895_276207_c1
467 nmdc:mga0rr50_24898_c1
468 nmdc:mga0rr50_50085_c1
469 nmdc:mga0sz30_1828_c1
470 Ga0495612_0043149
471 Ga0500595_004730
472 Ga0500652_002042
473 Ga0500658_0004053
474 Ga0500579_050018
475 Ga0500588_0050578
476 Ga0500600_0061992
477 Ga0500633_0004497
478 Ga0500587_002298
479 Ga0501084_0052809
480 Ga0466962_0001838
481 Ga0466962_0028842
482 Ga0466962_0039903
483 2508676748
484 2558909184
485 2585309539
486 2585318080
487 2644266555
488 2671833403
489 2676204212
490 2689960688
491 2774848788
492 2774851559
493 2816504958
494 2954692312
495 2954707378
496 3003000673
497 8002783570
498 8002786720

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00441

Acyl-CoA_dh_1

Acyl-CoA dehydrogenase, C-terminal domain

263

410

0.96

PF08028

Acyl-CoA_dh_2

Acyl-CoA dehydrogenase, C-terminal domain

275

381

0.94

PF02771

Acyl-CoA_dh_N

Acyl-CoA dehydrogenase, N-terminal domain

46

159

0.88

PF02770

Acyl-CoA_dh_M

Acyl-CoA dehydrogenase, middle domain

163

251

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
2vig-assembly1.cif.gz_B crystal structure of human short-chain acyl coa dehydrogenase 0.9244 5 356
3owa-assembly1.cif.gz_A crystal structure of acyl-coa dehydrogenase complexed with fad from bacillus anthracis 0.9193 1 356
3owa-assembly2.cif.gz_C crystal structure of acyl-coa dehydrogenase complexed with fad from bacillus anthracis 0.9189 5 356
2vig-assembly2.cif.gz_G crystal structure of human short-chain acyl coa dehydrogenase 0.9184 5 356
1jqi-assembly1.cif.gz_B crystal structure of rat short chain acyl-coa dehydrogenase complexed with acetoacetyl-coa 0.9183 4 356
ID Description Score Start End Superfamily
af_P95281_215_360_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9398 211 354 1.20.140.10
af_Q95YB2_257_407_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9294 212 355 1.20.140.10
af_Q22347_263_410_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9294 215 356 1.20.140.10
2cx9A03 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9272 209 354 1.20.140.10
2cx9B03 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9272 209 354 1.20.140.10
ID Description Score Start End GO Terms
AF-X0ZZ59-F1-model_v4 Acyl-CoA dehydrogenase/oxidase N-terminal domain-containing protein 0.9814 1 124 GO:0003995
GO:0050660
AF-A0A537VIA5-F1-model_v4 Acyl-CoA dehydrogenase family protein 0.9728 1 120 GO:0016627
GO:0050660
AF-A0A356VJR1-F1-model_v4 deleted 0.9637 1 270
AF-A0A3D5WDI9-F1-model_v4 Acyl-CoA dehydrogenase 0.9605 1 354 GO:0003995
GO:0050660
AF-A0A7C7U6K3-F1-model_v4 Acyl-CoA dehydrogenase 0.9585 1 356 GO:0003995
GO:0050660

Map