F360808
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 249 | 180 | 498 | 267 |
Family's Representative Sequence
| Representative Sequence | 3300025945|Ga0207679_10037335|Ga0207679_100373354 |
| Length | 309 |
| Sequence | VRPGGGRCAAELYALMVRRMRRLRQTKVTGSFPRSHAEGSMDRQLAIVFALTFLINLIGSLAYSVRIAGVRTGRIALSFSLFNILVLVSRTANTFQTPLLAKRVEHGLHVPSAVEDALGDFRWLLFAASLATVVGAVLTPTFQRLFTRAVEAFARNRSLPRLLLRALSPAGLAHLRDAAVLPSPANVVTEGTLRRPAAAGVLLVNTLATAVSTVGVFAALYAGYLAPELRVTASNLSGVINGLATILLFAIVDPYLAMLNDDVVTGRGAEPAFRRAVVGMLGSRLAGTALAQLLLLPAASLIAHLARVI |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 2 | 3300002739 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA | Metagenome | Endosphere |
| 3 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 4 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 5 | 3300003354 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS | Metagenome | Endosphere |
| 6 | 3300003781 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 | Metagenome | Endosphere |
| 7 | 3300003791 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 | Metagenome | Endosphere |
| 8 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 10 | 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 12 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 13 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Metagenome | Rhizosphere |
| 16 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 18 | 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Metagenome | Rhizosphere |
| 19 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 20 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 21 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 22 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 24 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 25 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 26 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 27 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 28 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 29 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 30 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 31 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 32 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 33 | 3300006186 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 | Metagenome | Endosphere |
| 34 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 35 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 37 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 39 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 40 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 41 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 43 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 44 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 45 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 46 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 47 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 48 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 49 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 50 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 51 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 52 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 53 | 3300025208 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) | Metagenome | Endosphere |
| 54 | 3300025284 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 55 | 3300025292 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 56 | 3300025295 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 57 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 58 | 3300025299 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 59 | 3300025302 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 60 | 3300025303 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 61 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300028653 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG | Metagenome | Rhizosphere |
| 85 | 3300028666 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG | Metagenome | Rhizosphere |
| 86 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 87 | 3300030521 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM | Metagenome | Unclassified |
| 88 | 3300031240 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG | Metagenome | Rhizosphere |
| 89 | 3300031247 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG | Metagenome | Rhizosphere |
| 90 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 91 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 92 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 93 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 94 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 95 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 96 | 3300035086 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 | Metagenome | Rhizosphere |
| 97 | 3300035120 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 | Metagenome | Rhizosphere |
| 98 | 3300035172 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 | Metagenome | Rhizosphere |
| 99 | 3300035241 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 | Metagenome | Rhizosphere |
| 100 | 3300035410 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 101 | 3300035724 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 | Metagenome | Rhizosphere |
| 102 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 103 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 104 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 105 | 3300038726 | Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 | Metagenome | Unclassified |
| 106 | 3300041441 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_1 MetaG | Metagenome | Rhizoplane |
| 107 | 3300042007 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 | Metagenome | Rhizosphere |
| 108 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 109 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 110 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 111 | 3300044706 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R | Metagenome | Rhizosphere |
| 112 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 113 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 114 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 115 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 116 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 117 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 118 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300046457 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300046471 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300046512 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 128 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 129 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 130 | 3300046679 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere | Metagenome | Rhizosphere |
| 131 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 132 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 133 | 3300046810 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere | Metagenome | Rhizosphere |
| 134 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 135 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 136 | 3300047444 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere | Metagenome | Rhizosphere |
| 137 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 138 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 139 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 140 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 141 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 142 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 143 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 144 | 3300049459 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere | Metagenome | Rhizosphere |
| 145 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 146 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 147 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 148 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 149 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 150 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 151 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 152 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 153 | 3300049593 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 | Metagenome | Rhizosphere |
| 154 | 3300049663 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought | Metagenome | Rhizosphere |
| 155 | 3300049664 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought | Metagenome | Rhizosphere |
| 156 | 3300049668 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought | Metagenome | Rhizosphere |
| 157 | 3300049669 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought | Metagenome | Rhizosphere |
| 158 | 3300049705 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought | Metagenome | Rhizosphere |
| 159 | 3300049707 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought | Metagenome | Rhizosphere |
| 160 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 161 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 162 | 3300049853 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought | Metagenome | Rhizosphere |
| 163 | 3300050516 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation | Metagenome | Endosphere |
| 164 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 165 | 3300053086 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere | Metagenome | Endosphere |
| 166 | 3300053088 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere | Metagenome | Endosphere |
| 167 | 3300053092 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere | Metagenome | Endosphere |
| 168 | 3300053111 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere | Metagenome | Endosphere |
| 169 | 3300053118 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere | Metagenome | Endosphere |
| 170 | 3300053146 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere | Metagenome | Endosphere |
| 171 | 3300053148 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere | Metagenome | Endosphere |
| 172 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 173 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
| 174 | 3300053160 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere | Metagenome | Endosphere |
| 175 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
| 176 | 2643221640 | Caulobacter sp. Root342 | Isolate | Unclassified |
| 177 | 2643221642 | Caulobacter sp. Root343 | Isolate | Unclassified |
| 178 | 2739367651 | Pedobacter sp. OK291 | Isolate | Unclassified |
| 179 | 2849281842 | Pedobacter sp. AK013 | Isolate | Rhizosphere |
| 180 | 2884791551 | Chitinophaga oryzae 1310 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 97.99 |
| Metatranscriptomes | 0 |
| Isolates | 2.01 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 11.65 |
| Nodule | 0 |
| Rhizoplane | 2.41 |
| Rhizosphere | 78.31 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 16.06 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0207679_10037335 | 3300025945 | Bacteria | 3452 |
| 2 | JGI25158J39367_1009900 | 3300002739 | Unclassified | 1297 |
| 3 | rootL2_10135976 | 3300003322 | Unclassified | 3236 |
| 4 | rootL2_10198322 | 3300003322 | Bacteria | 5249 |
| 5 | rootL2_10297336 | 3300003322 | Unclassified | 2854 |
| 6 | rootH1_10087047 | 3300003323 | Bacteria | 9700 |
| 7 | rootH1_10271969 | 3300003323 | Bacteria | 3145 |
| 8 | rootH1_10289817 | 3300003323 | Bacteria | 4719 |
| 9 | JGI25160J50197_1010190 | 3300003354 | Bacteria | 3417 |
| 10 | Ga0055536_1007498 | 3300003781 | Bacteria | 4867 |
| 11 | Ga0055530_10006079 | 3300003791 | Bacteria | 5510 |
| 12 | Ga0070658_10000411 | 3300005327 | Bacteria | 37211 |
| 13 | Ga0070683_100064888 | 3300005329 | Bacteria | 3399 |
| 14 | Ga0070666_10270310 | 3300005335 | Bacteria | 1206 |
| 15 | Ga0070680_100007270 | 3300005336 | Bacteria | 8439 |
| 16 | Ga0070682_100023988 | 3300005337 | Bacteria | 3626 |
| 17 | Ga0070660_100043033 | 3300005339 | Bacteria | 3449 |
| 18 | Ga0070661_100158874 | 3300005344 | Bacteria | 1711 |
| 19 | Ga0070661_100370832 | 3300005344 | Unclassified | 1127 |
| 20 | Ga0070688_100513819 | 3300005365 | Bacteria | 905 |
| 21 | Ga0070667_100404288 | 3300005367 | Unclassified | 1243 |
| 22 | Ga0070681_10337180 | 3300005458 | Bacteria | 1417 |
| 23 | Ga0070685_10003852 | 3300005466 | Bacteria | 7590 |
| 24 | Ga0070685_10026147 | 3300005466 | Bacteria | 3215 |
| 25 | Ga0070679_100001810 | 3300005530 | Bacteria | 19281 |
| 26 | Ga0070684_100012771 | 3300005535 | Bacteria | 6745 |
| 27 | Ga0070684_100160299 | 3300005535 | Bacteria | 2041 |
| 28 | Ga0068853_100177773 | 3300005539 | Bacteria | 1929 |
| 29 | Ga0070665_100054548 | 3300005548 | Plasmid | 4009 |
| 30 | Ga0070665_100201898 | 3300005548 | Bacteria | 1989 |
| 31 | Ga0068855_100036064 | 3300005563 | Bacteria | 5887 |
| 32 | Ga0068855_100063381 | 3300005563 | Bacteria | 4313 |
| 33 | Ga0068855_100136492 | 3300005563 | Bacteria | 2798 |
| 34 | Ga0068855_100301031 | 3300005563 | Unclassified | 1776 |
| 35 | Ga0070664_100017552 | 3300005564 | Bacteria | 5878 |
| 36 | Ga0070664_100103293 | 3300005564 | Unclassified | 2481 |
| 37 | Ga0068857_100007536 | 3300005577 | Bacteria | 9366 |
| 38 | Ga0068857_100156084 | 3300005577 | Bacteria | 2069 |
| 39 | Ga0068857_100534137 | 3300005577 | Bacteria | 1103 |
| 40 | Ga0068857_100725771 | 3300005577 | Bacteria | 945 |
| 41 | Ga0068854_100028377 | 3300005578 | Bacteria | 3867 |
| 42 | Ga0068856_100043751 | 3300005614 | Bacteria | 4405 |
| 43 | Ga0068856_100234150 | 3300005614 | Unclassified | 1852 |
| 44 | Ga0068856_100322388 | 3300005614 | Bacteria | 1562 |
| 45 | Ga0068856_100362125 | 3300005614 | Bacteria | 1469 |
| 46 | Ga0068852_100004007 | 3300005616 | Bacteria | 10359 |
| 47 | Ga0068852_100006094 | 3300005616 | Bacteria | 8689 |
| 48 | Ga0068864_100146034 | 3300005618 | Viruses | 2138 |
| 49 | Ga0068863_100683015 | 3300005841 | Bacteria | 1020 |
| 50 | Ga0068860_100001703 | 3300005843 | Bacteria | 23500 |
| 51 | Ga0070717_10000033 | 3300006028 | Bacteria | 131514 |
| 52 | Ga0075369_10014818 | 3300006186 | Bacteria | 3119 |
| 53 | Ga0075366_10015179 | 3300006195 | Bacteria | 4411 |
| 54 | Ga0097621_100208199 | 3300006237 | Unclassified | 1700 |
| 55 | Ga0105240_10002157 | 3300009093 | Bacteria | 32150 |
| 56 | Ga0105240_10005212 | 3300009093 | Bacteria | 19445 |
| 57 | Ga0105240_10005668 | 3300009093 | Bacteria | 18536 |
| 58 | Ga0105240_10011922 | 3300009093 | Bacteria | 12055 |
| 59 | Ga0111539_10452909 | 3300009094 | Bacteria | 1494 |
| 60 | Ga0105247_10093647 | 3300009101 | Bacteria | 1910 |
| 61 | Ga0105241_10009586 | 3300009174 | Bacteria | 7118 |
| 62 | Ga0105241_10036026 | 3300009174 | Unclassified | 3723 |
| 63 | Ga0105242_10752764 | 3300009176 | Bacteria | 959 |
| 64 | Ga0105248_10741114 | 3300009177 | Bacteria | 1108 |
| 65 | Ga0105237_10003501 | 3300009545 | Bacteria | 18632 |
| 66 | Ga0105237_10323028 | 3300009545 | Bacteria | 1547 |
| 67 | Ga0105237_10327147 | 3300009545 | Bacteria | 1537 |
| 68 | Ga0105237_10698267 | 3300009545 | Unclassified | 1021 |
| 69 | Ga0105238_10014304 | 3300009551 | Bacteria | 8022 |
| 70 | Ga0105238_10065618 | 3300009551 | Bacteria | 3631 |
| 71 | Ga0105238_10122317 | 3300009551 | Unclassified | 2582 |
| 72 | Ga0105239_10001335 | 3300010375 | Bacteria | 33242 |
| 73 | Ga0105239_10176505 | 3300010375 | Bacteria | 2389 |
| 74 | Ga0105239_10287227 | 3300010375 | Bacteria | 1852 |
| 75 | Ga0157373_10108427 | 3300013100 | Bacteria | 1952 |
| 76 | Ga0157370_10001863 | 3300013104 | Bacteria | 26004 |
| 77 | Ga0157369_10095100 | 3300013105 | Unclassified | 3180 |
| 78 | Ga0157374_10111902 | 3300013296 | Bacteria | 2627 |
| 79 | Ga0157374_10130711 | 3300013296 | Unclassified | 2430 |
| 80 | Ga0163162_10064836 | 3300013306 | Unclassified | 3699 |
| 81 | Ga0157372_10012232 | 3300013307 | Bacteria | 9139 |
| 82 | Ga0157372_10020959 | 3300013307 | Bacteria | 7056 |
| 83 | Ga0157372_10171444 | 3300013307 | Bacteria | 2510 |
| 84 | Ga0163163_10259603 | 3300014325 | Unclassified | 1788 |
| 85 | Ga0157379_10435999 | 3300014968 | Unclassified | 1208 |
| 86 | Ga0209436_103602 | 3300025208 | Unclassified | 4045 |
| 87 | Ga0209130_1000510 | 3300025284 | Bacteria | 39344 |
| 88 | Ga0209676_1007605 | 3300025292 | Bacteria | 5033 |
| 89 | Ga0209564_1014166 | 3300025295 | Bacteria | 3336 |
| 90 | Ga0209050_1009358 | 3300025298 | Bacteria | 5026 |
| 91 | Ga0209256_1010529 | 3300025299 | Bacteria | 3853 |
| 92 | Ga0207426_1000024 | 3300025302 | Bacteria | 534075 |
| 93 | Ga0207426_1000089 | 3300025302 | Bacteria | 281224 |
| 94 | Ga0209051_1008700 | 3300025303 | Bacteria | 5343 |
| 95 | Ga0207647_10009362 | 3300025904 | Bacteria | 6960 |
| 96 | Ga0207705_10000339 | 3300025909 | Bacteria | 42279 |
| 97 | Ga0207705_10018852 | 3300025909 | Bacteria | 4933 |
| 98 | Ga0207705_10295160 | 3300025909 | Bacteria | 1242 |
| 99 | Ga0207654_10038038 | 3300025911 | Bacteria | 2697 |
| 100 | Ga0207654_10166613 | 3300025911 | Bacteria | 1427 |
| 101 | Ga0207707_10015899 | 3300025912 | Bacteria | 6563 |
| 102 | Ga0207707_10297160 | 3300025912 | Bacteria | 1397 |
| 103 | Ga0207695_10001270 | 3300025913 | Bacteria | 42915 |
| 104 | Ga0207695_10030363 | 3300025913 | Bacteria | 5949 |
| 105 | Ga0207695_10079349 | 3300025913 | Unclassified | 3327 |
| 106 | Ga0207671_10023351 | 3300025914 | Bacteria | 4664 |
| 107 | Ga0207649_10136764 | 3300025920 | Bacteria | 1672 |
| 108 | Ga0207652_10037976 | 3300025921 | Bacteria | 4079 |
| 109 | Ga0207694_10041238 | 3300025924 | Unclassified | 3556 |
| 110 | Ga0207694_10077002 | 3300025924 | Unclassified | 2613 |
| 111 | Ga0207694_10092530 | 3300025924 | Bacteria | 2387 |
| 112 | Ga0207694_10360283 | 3300025924 | Bacteria | 1205 |
| 113 | Ga0207686_10430778 | 3300025934 | Bacteria | 1011 |
| 114 | Ga0207679_10281703 | 3300025945 | Unclassified | 1426 |
| 115 | Ga0207667_10000598 | 3300025949 | Bacteria | 46822 |
| 116 | Ga0207667_10024100 | 3300025949 | Bacteria | 6689 |
| 117 | Ga0207667_10030092 | 3300025949 | Bacteria | 5877 |
| 118 | Ga0207667_10846873 | 3300025949 | Bacteria | 909 |
| 119 | Ga0207712_10545667 | 3300025961 | Bacteria | 996 |
| 120 | Ga0207640_10014324 | 3300025981 | Bacteria | 4561 |
| 121 | Ga0207658_10376047 | 3300025986 | Unclassified | 1243 |
| 122 | Ga0207639_10031431 | 3300026041 | Bacteria | 3902 |
| 123 | Ga0207702_10474418 | 3300026078 | Unclassified | 1217 |
| 124 | Ga0207702_10619659 | 3300026078 | Bacteria | 1063 |
| 125 | Ga0207641_10645689 | 3300026088 | Bacteria | 1039 |
| 126 | Ga0207676_10136860 | 3300026095 | Viruses | 2091 |
| 127 | Ga0207674_10012762 | 3300026116 | Bacteria | 9384 |
| 128 | Ga0207674_10111287 | 3300026116 | Unclassified | 2713 |
| 129 | Ga0207674_10356790 | 3300026116 | Bacteria | 1413 |
| 130 | Ga0207683_10059545 | 3300026121 | Bacteria | 3355 |
| 131 | Ga0207698_10001946 | 3300026142 | Bacteria | 12130 |
| 132 | Ga0207698_10030494 | 3300026142 | Bacteria | 3878 |
| 133 | Ga0268266_10022045 | 3300028379 | Bacteria | 5430 |
| 134 | Ga0268264_10009331 | 3300028381 | Bacteria | 8123 |
| 135 | Ga0265323_10000728 | 3300028653 | Bacteria | 17821 |
| 136 | Ga0265336_10015297 | 3300028666 | Bacteria | 2526 |
| 137 | Ga0307515_10102483 | 3300028794 | Bacteria | 3442 |
| 138 | Ga0307511_10002946 | 3300030521 | Bacteria | 17641 |
| 139 | Ga0265320_10107976 | 3300031240 | Bacteria | 1277 |
| 140 | Ga0265340_10111195 | 3300031247 | Unclassified | 1267 |
| 141 | Ga0265327_10001648 | 3300031251 | Bacteria | 26955 |
| 142 | Ga0265316_10001635 | 3300031344 | Bacteria | 23873 |
| 143 | Ga0265316_10179184 | 3300031344 | Unclassified | 1578 |
| 144 | Ga0307513_10002967 | 3300031456 | Bacteria | 23138 |
| 145 | Ga0307513_10257199 | 3300031456 | Unclassified | 1538 |
| 146 | Ga0307509_10138997 | 3300031507 | Bacteria | 2369 |
| 147 | Ga0307509_10165406 | 3300031507 | Bacteria | 2102 |
| 148 | Ga0265314_10000042 | 3300031711 | Bacteria | 215775 |
| 149 | Ga0307516_10301785 | 3300031730 | Bacteria | 1277 |
| 150 | Ga0373934_0095776 | 3300035086 | Bacteria | 1198 |
| 151 | Ga0373957_0154781 | 3300035120 | Unclassified | 942 |
| 152 | Ga0373955_0075415 | 3300035172 | Bacteria | 1895 |
| 153 | Ga0373961_0000312 | 3300035241 | Bacteria | 21640 |
| 154 | Ga0373924_0123182 | 3300035410 | Bacteria | 1126 |
| 155 | Ga0373933_0070650 | 3300035724 | Bacteria | 2124 |
| 156 | Ga0373937_0002272 | 3300036401 | Bacteria | 16046 |
| 157 | Ga0395900_0031378 | 3300037418 | Bacteria | 5459 |
| 158 | Ga0395900_0113201 | 3300037418 | Bacteria | 2785 |
| 159 | Ga0395905_0000011 | 3300037471 | Bacteria | 424563 |
| 160 | Ga0395905_0292177 | 3300037471 | Bacteria | 1516 |
| 161 | Ga0400490_23439 | 3300038726 | Bacteria | 1239 |
| 162 | Ga0451787_750547 | 3300041441 | Bacteria | 949 |
| 163 | Ga0439449_0089516 | 3300042007 | Bacteria | 1136 |
| 164 | Ga0453683_0515571 | 3300044673 | Bacteria | 776 |
| 165 | Ga0466966_0004810 | 3300044684 | Bacteria | 8880 |
| 166 | Ga0466961_0005182 | 3300044693 | Bacteria | 8201 |
| 167 | Ga0466964_0004471 | 3300044706 | Bacteria | 5165 |
| 168 | Ga0453684_0000523 | 3300044712 | Bacteria | 146814 |
| 169 | Ga0453684_0001530 | 3300044712 | Bacteria | 64680 |
| 170 | Ga0453684_0019206 | 3300044712 | Bacteria | 10421 |
| 171 | Ga0453684_0037810 | 3300044712 | Bacteria | 6618 |
| 172 | Ga0453684_0053771 | 3300044712 | Bacteria | 5253 |
| 173 | Ga0453684_0068992 | 3300044712 | Bacteria | 4486 |
| 174 | Ga0453684_0111277 | 3300044712 | Unclassified | 3327 |
| 175 | Ga0466971_0005902 | 3300044719 | Bacteria | 5328 |
| 176 | Ga0466970_0008754 | 3300044765 | Bacteria | 5099 |
| 177 | Ga0466957_0021667 | 3300044842 | Bacteria | 3788 |
| 178 | Ga0466959_0016358 | 3300045049 | Bacteria | 5418 |
| 179 | Ga0451576_0151026 | 3300045051 | Bacteria | 2423 |
| 180 | Ga0495592_0246083 | 3300046454 | Unclassified | 1184 |
| 181 | Ga0495590_0004997 | 3300046457 | Bacteria | 5291 |
| 182 | Ga0495651_0041461 | 3300046462 | Unclassified | 3576 |
| 183 | Ga0495650_0012866 | 3300046471 | Bacteria | 4469 |
| 184 | Ga0495610_0005643 | 3300046512 | Bacteria | 8824 |
| 185 | Ga0495652_0065200 | 3300046529 | Unclassified | 3061 |
| 186 | Ga0495587_0069993 | 3300046536 | Bacteria | 2042 |
| 187 | Ga0495645_0005773 | 3300046543 | Bacteria | 8535 |
| 188 | Ga0495667_0011163 | 3300046559 | Bacteria | 6081 |
| 189 | Ga0495668_0008165 | 3300046616 | Bacteria | 6578 |
| 190 | Ga0495668_0090378 | 3300046616 | Bacteria | 1678 |
| 191 | Ga0495634_0100489 | 3300046642 | Bacteria | 1869 |
| 192 | Ga0495599_0001973 | 3300046678 | Bacteria | 11888 |
| 193 | Ga0495623_0122127 | 3300046679 | Bacteria | 1567 |
| 194 | Ga0495613_0005854 | 3300046689 | Bacteria | 9196 |
| 195 | Ga0495600_0021849 | 3300046809 | Unclassified | 4102 |
| 196 | Ga0495660_0270553 | 3300046810 | Unclassified | 781 |
| 197 | Ga0495672_0046856 | 3300047320 | Bacteria | 2576 |
| 198 | Ga0495680_0253659 | 3300047322 | Unclassified | 1246 |
| 199 | Ga0495675_0060604 | 3300047444 | Unclassified | 2398 |
| 200 | Ga0495686_0001592 | 3300047472 | Bacteria | 23973 |
| 201 | Ga0495686_0130739 | 3300047472 | Bacteria | 1489 |
| 202 | Ga0496107_0038896 | 3300048910 | Bacteria | 3412 |
| 203 | Ga0496108_0200315 | 3300048911 | Bacteria | 1733 |
| 204 | Ga0496109_0139616 | 3300048912 | Unclassified | 2266 |
| 205 | Ga0496113_0023952 | 3300048916 | Bacteria | 4334 |
| 206 | Ga0496115_0262405 | 3300048918 | Bacteria | 1420 |
| 207 | Ga0496126_0088829 | 3300048929 | Bacteria | 2721 |
| 208 | Ga0495678_000531 | 3300049459 | Bacteria | 36978 |
| 209 | Ga0501032_0000435 | 3300049569 | Bacteria | 34412 |
| 210 | Ga0501034_0006938 | 3300049571 | Bacteria | 12106 |
| 211 | Ga0501034_0459824 | 3300049571 | Bacteria | 1189 |
| 212 | Ga0501036_0109623 | 3300049572 | Bacteria | 2333 |
| 213 | Ga0501043_0098720 | 3300049579 | Bacteria | 2295 |
| 214 | Ga0501047_0226135 | 3300049581 | Unclassified | 1726 |
| 215 | Ga0501067_0003119 | 3300049583 | Bacteria | 9153 |
| 216 | Ga0501072_0260574 | 3300049588 | Bacteria | 1380 |
| 217 | Ga0501073_0000019 | 3300049589 | Bacteria | 144300 |
| 218 | Ga0501077_0000157 | 3300049593 | Bacteria | 38058 |
| 219 | Ga0501223_000018 | 3300049663 | Bacteria | 67853 |
| 220 | Ga0501224_000002 | 3300049664 | Bacteria | 229331 |
| 221 | Ga0501233_000006 | 3300049668 | Bacteria | 39891 |
| 222 | Ga0501235_000017 | 3300049669 | Bacteria | 31124 |
| 223 | Ga0501225_0000049 | 3300049705 | Bacteria | 40546 |
| 224 | Ga0501234_000988 | 3300049707 | Bacteria | 4503 |
| 225 | Ga0501080_0000655 | 3300049742 | Bacteria | 27483 |
| 226 | Ga0501044_0002199 | 3300049823 | Bacteria | 22360 |
| 227 | Ga0501044_0910634 | 3300049823 | Bacteria | 754 |
| 228 | Ga0501226_000026 | 3300049853 | Bacteria | 91031 |
| 229 | nmdc:mga0sz30_72279_c1 | 3300050516 | Bacteria | 1486 |
| 230 | Ga0495619_0168819 | 3300053085 | Unclassified | 1513 |
| 231 | Ga0500578_0000005 | 3300053086 | Bacteria | 243789 |
| 232 | Ga0500578_0371556 | 3300053086 | Bacteria | 831 |
| 233 | Ga0500644_0000023 | 3300053088 | Bacteria | 97652 |
| 234 | Ga0500644_0015424 | 3300053088 | Bacteria | 2178 |
| 235 | Ga0500583_0000097 | 3300053092 | Bacteria | 48045 |
| 236 | Ga0500572_000294 | 3300053111 | Bacteria | 17871 |
| 237 | Ga0500594_0000345 | 3300053118 | Bacteria | 10421 |
| 238 | Ga0500588_0013078 | 3300053146 | Bacteria | 2075 |
| 239 | Ga0500590_086607 | 3300053148 | Bacteria | 1528 |
| 240 | Ga0500616_0053978 | 3300053153 | Bacteria | 2107 |
| 241 | Ga0500622_0003514 | 3300053156 | Bacteria | 10392 |
| 242 | Ga0500622_0010497 | 3300053156 | Bacteria | 5081 |
| 243 | Ga0500633_0092154 | 3300053160 | Bacteria | 1108 |
| 244 | Ga0466962_0031603 | 3300061719 | Bacteria | 2534 |
| 245 | 2644225550 | 2643221640 | Bacteria | 5258820 |
| 246 | 2644234941 | 2643221642 | Bacteria | 5357871 |
| 247 | 2739591504 | 2739367651 | Bacteria | 6359826 |
| 248 | 2849283220 | 2849281842 | Bacteria | 6065644 |
| 249 | 2884796736 | 2884791551 | Bacteria | 8511252 |
| 250 | Ga0207679_10037335 | |||
| 251 | JGI25158J39367_1009900 | |||
| 252 | rootL2_10135976 | |||
| 253 | rootL2_10198322 | |||
| 254 | rootL2_10297336 | |||
| 255 | rootH1_10087047 | |||
| 256 | rootH1_10271969 | |||
| 257 | rootH1_10289817 | |||
| 258 | JGI25160J50197_1010190 | |||
| 259 | Ga0055536_1007498 | |||
| 260 | Ga0055530_10006079 | |||
| 261 | Ga0070658_10000411 | |||
| 262 | Ga0070683_100064888 | |||
| 263 | Ga0070666_10270310 | |||
| 264 | Ga0070680_100007270 | |||
| 265 | Ga0070682_100023988 | |||
| 266 | Ga0070660_100043033 | |||
| 267 | Ga0070661_100158874 | |||
| 268 | Ga0070661_100370832 | |||
| 269 | Ga0070688_100513819 | |||
| 270 | Ga0070667_100404288 | |||
| 271 | Ga0070681_10337180 | |||
| 272 | Ga0070685_10003852 | |||
| 273 | Ga0070685_10026147 | |||
| 274 | Ga0070679_100001810 | |||
| 275 | Ga0070684_100012771 | |||
| 276 | Ga0070684_100160299 | |||
| 277 | Ga0068853_100177773 | |||
| 278 | Ga0070665_100054548 | |||
| 279 | Ga0070665_100201898 | |||
| 280 | Ga0068855_100036064 | |||
| 281 | Ga0068855_100063381 | |||
| 282 | Ga0068855_100136492 | |||
| 283 | Ga0068855_100301031 | |||
| 284 | Ga0070664_100017552 | |||
| 285 | Ga0070664_100103293 | |||
| 286 | Ga0068857_100007536 | |||
| 287 | Ga0068857_100156084 | |||
| 288 | Ga0068857_100534137 | |||
| 289 | Ga0068857_100725771 | |||
| 290 | Ga0068854_100028377 | |||
| 291 | Ga0068856_100043751 | |||
| 292 | Ga0068856_100234150 | |||
| 293 | Ga0068856_100322388 | |||
| 294 | Ga0068856_100362125 | |||
| 295 | Ga0068852_100004007 | |||
| 296 | Ga0068852_100006094 | |||
| 297 | Ga0068864_100146034 | |||
| 298 | Ga0068863_100683015 | |||
| 299 | Ga0068860_100001703 | |||
| 300 | Ga0070717_10000033 | |||
| 301 | Ga0075369_10014818 | |||
| 302 | Ga0075366_10015179 | |||
| 303 | Ga0097621_100208199 | |||
| 304 | Ga0105240_10002157 | |||
| 305 | Ga0105240_10005212 | |||
| 306 | Ga0105240_10005668 | |||
| 307 | Ga0105240_10011922 | |||
| 308 | Ga0111539_10452909 | |||
| 309 | Ga0105247_10093647 | |||
| 310 | Ga0105241_10009586 | |||
| 311 | Ga0105241_10036026 | |||
| 312 | Ga0105242_10752764 | |||
| 313 | Ga0105248_10741114 | |||
| 314 | Ga0105237_10003501 | |||
| 315 | Ga0105237_10323028 | |||
| 316 | Ga0105237_10327147 | |||
| 317 | Ga0105237_10698267 | |||
| 318 | Ga0105238_10014304 | |||
| 319 | Ga0105238_10065618 | |||
| 320 | Ga0105238_10122317 | |||
| 321 | Ga0105239_10001335 | |||
| 322 | Ga0105239_10176505 | |||
| 323 | Ga0105239_10287227 | |||
| 324 | Ga0157373_10108427 | |||
| 325 | Ga0157370_10001863 | |||
| 326 | Ga0157369_10095100 | |||
| 327 | Ga0157374_10111902 | |||
| 328 | Ga0157374_10130711 | |||
| 329 | Ga0163162_10064836 | |||
| 330 | Ga0157372_10012232 | |||
| 331 | Ga0157372_10020959 | |||
| 332 | Ga0157372_10171444 | |||
| 333 | Ga0163163_10259603 | |||
| 334 | Ga0157379_10435999 | |||
| 335 | Ga0209436_103602 | |||
| 336 | Ga0209130_1000510 | |||
| 337 | Ga0209676_1007605 | |||
| 338 | Ga0209564_1014166 | |||
| 339 | Ga0209050_1009358 | |||
| 340 | Ga0209256_1010529 | |||
| 341 | Ga0207426_1000024 | |||
| 342 | Ga0207426_1000089 | |||
| 343 | Ga0209051_1008700 | |||
| 344 | Ga0207647_10009362 | |||
| 345 | Ga0207705_10000339 | |||
| 346 | Ga0207705_10018852 | |||
| 347 | Ga0207705_10295160 | |||
| 348 | Ga0207654_10038038 | |||
| 349 | Ga0207654_10166613 | |||
| 350 | Ga0207707_10015899 | |||
| 351 | Ga0207707_10297160 | |||
| 352 | Ga0207695_10001270 | |||
| 353 | Ga0207695_10030363 | |||
| 354 | Ga0207695_10079349 | |||
| 355 | Ga0207671_10023351 | |||
| 356 | Ga0207649_10136764 | |||
| 357 | Ga0207652_10037976 | |||
| 358 | Ga0207694_10041238 | |||
| 359 | Ga0207694_10077002 | |||
| 360 | Ga0207694_10092530 | |||
| 361 | Ga0207694_10360283 | |||
| 362 | Ga0207686_10430778 | |||
| 363 | Ga0207679_10281703 | |||
| 364 | Ga0207667_10000598 | |||
| 365 | Ga0207667_10024100 | |||
| 366 | Ga0207667_10030092 | |||
| 367 | Ga0207667_10846873 | |||
| 368 | Ga0207712_10545667 | |||
| 369 | Ga0207640_10014324 | |||
| 370 | Ga0207658_10376047 | |||
| 371 | Ga0207639_10031431 | |||
| 372 | Ga0207702_10474418 | |||
| 373 | Ga0207702_10619659 | |||
| 374 | Ga0207641_10645689 | |||
| 375 | Ga0207676_10136860 | |||
| 376 | Ga0207674_10012762 | |||
| 377 | Ga0207674_10111287 | |||
| 378 | Ga0207674_10356790 | |||
| 379 | Ga0207683_10059545 | |||
| 380 | Ga0207698_10001946 | |||
| 381 | Ga0207698_10030494 | |||
| 382 | Ga0268266_10022045 | |||
| 383 | Ga0268264_10009331 | |||
| 384 | Ga0265323_10000728 | |||
| 385 | Ga0265336_10015297 | |||
| 386 | Ga0307515_10102483 | |||
| 387 | Ga0307511_10002946 | |||
| 388 | Ga0265320_10107976 | |||
| 389 | Ga0265340_10111195 | |||
| 390 | Ga0265327_10001648 | |||
| 391 | Ga0265316_10001635 | |||
| 392 | Ga0265316_10179184 | |||
| 393 | Ga0307513_10002967 | |||
| 394 | Ga0307513_10257199 | |||
| 395 | Ga0307509_10138997 | |||
| 396 | Ga0307509_10165406 | |||
| 397 | Ga0265314_10000042 | |||
| 398 | Ga0307516_10301785 | |||
| 399 | Ga0373934_0095776 | |||
| 400 | Ga0373957_0154781 | |||
| 401 | Ga0373955_0075415 | |||
| 402 | Ga0373961_0000312 | |||
| 403 | Ga0373924_0123182 | |||
| 404 | Ga0373933_0070650 | |||
| 405 | Ga0373937_0002272 | |||
| 406 | Ga0395900_0031378 | |||
| 407 | Ga0395900_0113201 | |||
| 408 | Ga0395905_0000011 | |||
| 409 | Ga0395905_0292177 | |||
| 410 | Ga0400490_23439 | |||
| 411 | Ga0451787_750547 | |||
| 412 | Ga0439449_0089516 | |||
| 413 | Ga0453683_0515571 | |||
| 414 | Ga0466966_0004810 | |||
| 415 | Ga0466961_0005182 | |||
| 416 | Ga0466964_0004471 | |||
| 417 | Ga0453684_0000523 | |||
| 418 | Ga0453684_0001530 | |||
| 419 | Ga0453684_0019206 | |||
| 420 | Ga0453684_0037810 | |||
| 421 | Ga0453684_0053771 | |||
| 422 | Ga0453684_0068992 | |||
| 423 | Ga0453684_0111277 | |||
| 424 | Ga0466971_0005902 | |||
| 425 | Ga0466970_0008754 | |||
| 426 | Ga0466957_0021667 | |||
| 427 | Ga0466959_0016358 | |||
| 428 | Ga0451576_0151026 | |||
| 429 | Ga0495592_0246083 | |||
| 430 | Ga0495590_0004997 | |||
| 431 | Ga0495651_0041461 | |||
| 432 | Ga0495650_0012866 | |||
| 433 | Ga0495610_0005643 | |||
| 434 | Ga0495652_0065200 | |||
| 435 | Ga0495587_0069993 | |||
| 436 | Ga0495645_0005773 | |||
| 437 | Ga0495667_0011163 | |||
| 438 | Ga0495668_0008165 | |||
| 439 | Ga0495668_0090378 | |||
| 440 | Ga0495634_0100489 | |||
| 441 | Ga0495599_0001973 | |||
| 442 | Ga0495623_0122127 | |||
| 443 | Ga0495613_0005854 | |||
| 444 | Ga0495600_0021849 | |||
| 445 | Ga0495660_0270553 | |||
| 446 | Ga0495672_0046856 | |||
| 447 | Ga0495680_0253659 | |||
| 448 | Ga0495675_0060604 | |||
| 449 | Ga0495686_0001592 | |||
| 450 | Ga0495686_0130739 | |||
| 451 | Ga0496107_0038896 | |||
| 452 | Ga0496108_0200315 | |||
| 453 | Ga0496109_0139616 | |||
| 454 | Ga0496113_0023952 | |||
| 455 | Ga0496115_0262405 | |||
| 456 | Ga0496126_0088829 | |||
| 457 | Ga0495678_000531 | |||
| 458 | Ga0501032_0000435 | |||
| 459 | Ga0501034_0006938 | |||
| 460 | Ga0501034_0459824 | |||
| 461 | Ga0501036_0109623 | |||
| 462 | Ga0501043_0098720 | |||
| 463 | Ga0501047_0226135 | |||
| 464 | Ga0501067_0003119 | |||
| 465 | Ga0501072_0260574 | |||
| 466 | Ga0501073_0000019 | |||
| 467 | Ga0501077_0000157 | |||
| 468 | Ga0501223_000018 | |||
| 469 | Ga0501224_000002 | |||
| 470 | Ga0501233_000006 | |||
| 471 | Ga0501235_000017 | |||
| 472 | Ga0501225_0000049 | |||
| 473 | Ga0501234_000988 | |||
| 474 | Ga0501080_0000655 | |||
| 475 | Ga0501044_0002199 | |||
| 476 | Ga0501044_0910634 | |||
| 477 | Ga0501226_000026 | |||
| 478 | nmdc:mga0sz30_72279_c1 | |||
| 479 | Ga0495619_0168819 | |||
| 480 | Ga0500578_0000005 | |||
| 481 | Ga0500578_0371556 | |||
| 482 | Ga0500644_0000023 | |||
| 483 | Ga0500644_0015424 | |||
| 484 | Ga0500583_0000097 | |||
| 485 | Ga0500572_000294 | |||
| 486 | Ga0500594_0000345 | |||
| 487 | Ga0500588_0013078 | |||
| 488 | Ga0500590_086607 | |||
| 489 | Ga0500616_0053978 | |||
| 490 | Ga0500622_0003514 | |||
| 491 | Ga0500622_0010497 | |||
| 492 | Ga0500633_0092154 | |||
| 493 | Ga0466962_0031603 | |||
| 494 | 2644225550 | |||
| 495 | 2644234941 | |||
| 496 | 2739591504 | |||
| 497 | 2849283220 | |||
| 498 | 2884796736 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3k1s-assembly1.cif.gz_A | crystal structure of the pts cellobiose specific enzyme iia from bacillus anthracis | 0.456 | 150 | 265 |
| 3k1s-assembly1.cif.gz_A | crystal structure of the pts cellobiose specific enzyme iia from bacillus anthracis | 0.4267 | 150 | 265 |
| 5c6f-assembly1.cif.gz_A | crystal structures of ferritin mutants reveal side-on binding to diiron and end-on cleavage of oxygen | 0.4015 | 149 | 265 |
| 3bve-assembly1.cif.gz_A | structural basis for the iron uptake mechanism of helicobacter pylori ferritin | 0.4007 | 149 | 265 |
| 5u1a-assembly2.cif.gz_I | ferritin with gc mtre loop 1 inserted at his34 | 0.3931 | 149 | 265 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q4E016_292_401_1.20.58.420 | Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;AHSP | 0.475 | 153 | 248 | 1.20.58.420 |
| af_Q9VZE2_4_150_1.20.140.150 | Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3; | 0.472 | 141 | 255 | 1.20.140.150 |
| af_Q7Z138_18_164_1.20.1080.10 | Mainly Alpha;Up-down Bundle;Glycerol uptake facilitator protein;Glycerol uptake facilitator protein. | 0.4503 | 153 | 248 | 1.20.1080.10 |
| af_Q4E016_292_401_1.20.58.420 | Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;AHSP | 0.4284 | 153 | 248 | 1.20.58.420 |
| af_Q0DQQ3_146_306_1.20.1250.20 | Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains | 0.4008 | 153 | 263 | 1.20.1250.20 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A286GPD4-F1-model_v4 | Lipid II flippase Amj | 0.9783 | 1 | 266 |
GO:0005886
GO:0008360 GO:0009252 GO:0015648 GO:0071555 |
| AF-A0A5C6ZAK0-F1-model_v4 | Lipid II flippase Amj | 0.9713 | 1 | 266 |
GO:0005886
GO:0008360 GO:0009252 GO:0015648 GO:0071555 |
| AF-A0A5C6ZAK0-F1-model_v4 | Lipid II flippase Amj | 0.9677 | 1 | 266 |
GO:0005886
GO:0008360 GO:0009252 GO:0015648 GO:0071555 |
| AF-A0A2S8IHT3-F1-model_v4 | DUF2837 domain-containing protein | 0.9676 | 1 | 237 |
GO:0016020
|
| AF-A0A267T871-F1-model_v4 | Lipid II flippase Amj | 0.9657 | 4 | 266 |
GO:0005886
GO:0008360 GO:0009252 GO:0015648 GO:0071555 |