F360538

General Info

Members Datasets Scaffolds Average Seq Length
249 156 249 371

Family's Representative Sequence

Representative Sequence 3300005445|Ga0070708_100001824|Ga0070708_1000018242
Length 412
Sequence MPIKWRLLKALRSCKRSFGVDPHVEWGESVTNNMTVRETLAKLVSINSVSSRSNAEITEYIAQRCEKMGLRVWLLPYPDDNGIEKINLIALAGTKFSKSIEPTSVELALVGHTDTVPYDAGWSEATTLTEREGKLYGRGACDTKGFIAATLTAVERLDLTRLRRPFALIFTADEEIGLRGAKRLAESKPLRVRYSIVGEPTSLQPIRAGKGYSLAEIVVRGREAHSAYPALGVSAIFRAVRLISRIEAIAHQIQKDEHPHFDPAYTTLNIGLIRGGSAKNVIAGECRFTLEWRPIPTQDSGHVLDLLNSAIEREKLSDPDFECEIDAGRADAGFETSPTSRLVTLLEKLTGKTAGTVAFGTEAAQIGALGAEAVVLGPGDIRVAHRTGEFVPIEELQRCTEIIAQAITSLCL

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
6 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
7 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
8 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
11 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
16 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
17 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
18 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
19 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
22 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
23 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
24 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
25 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
26 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
29 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
30 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
31 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
32 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
33 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
34 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
35 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
36 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
37 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
38 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
39 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
40 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
41 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
42 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
43 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
44 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
45 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
47 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
48 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
49 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
50 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
51 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
52 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
54 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
55 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
57 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
59 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
60 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
61 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
62 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
63 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
64 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
65 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
66 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
67 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
68 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
69 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
70 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
71 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
72 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
73 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
74 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
108 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
111 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
112 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
113 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
114 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
115 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
116 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
117 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
118 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
119 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
120 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
121 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
122 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
123 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
124 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
125 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
126 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
127 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
128 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
129 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
130 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
131 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
132 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
133 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
134 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
136 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
137 3300049654 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_A_0_control Metagenome Rhizosphere
138 3300049660 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_B_0_control Metagenome Rhizosphere
139 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
140 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
141 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
142 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
143 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
144 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
145 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
146 3300049779 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_A_7_drought Metagenome Rhizosphere
147 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
148 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
149 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
150 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
151 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
152 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
153 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
154 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
155 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
156 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.4
Nodule 0
Rhizoplane 2.81
Rhizosphere 95.58
Stem 0
Stem Tuber 0
Unclassified 1.2

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_3347381 2162886007 Bacteria 2179
2 JGI24751J29686_10000011 3300002459 Bacteria 117978
3 rootL2_10067598 3300003322 Unclassified 4402
4 Ga0065714_10064818 3300005288 Bacteria 18008
5 Ga0065704_10085221 3300005289 Bacteria 3245
6 Ga0065712_10067985 3300005290 Bacteria 18008
7 Ga0065712_10076554 3300005290 Bacteria 3640
8 Ga0065715_10090488 3300005293 Bacteria 6927
9 Ga0065715_10118772 3300005293 Bacteria 2306
10 Ga0065707_10034621 3300005295 Bacteria 1368
11 Ga0065707_10087763 3300005295 Bacteria 4898
12 Ga0065707_10101364 3300005295 Bacteria 2869
13 Ga0070670_100000295 3300005331 Bacteria 43851
14 Ga0070670_100034143 3300005331 Bacteria 4378
15 Ga0070670_100210573 3300005331 Bacteria 1690
16 Ga0068869_100081643 3300005334 Bacteria 2414
17 Ga0070680_100001381 3300005336 Bacteria 17562
18 Ga0070689_100009841 3300005340 Bacteria 6797
19 Ga0070689_100282300 3300005340 Bacteria 1378
20 Ga0070669_100027307 3300005353 Bacteria 4107
21 Ga0070671_100019124 3300005355 Bacteria 5571
22 Ga0070671_100089477 3300005355 Bacteria 2577
23 Ga0070659_100072621 3300005366 Unclassified 2738
24 Ga0070701_10111226 3300005438 Bacteria 1530
25 Ga0070705_100026606 3300005440 Bacteria 3150
26 Ga0070700_100094285 3300005441 Bacteria 1960
27 Ga0070700_100166970 3300005441 Unclassified 1521
28 Ga0070708_100001824 3300005445 Bacteria 16336
29 Ga0070681_10000359 3300005458 Bacteria 36799
30 Ga0070681_10022503 3300005458 Bacteria 6329
31 Ga0068867_100017457 3300005459 Bacteria 5097
32 Ga0070685_10205937 3300005466 Bacteria 1281
33 Ga0070706_100000001 3300005467 Bacteria 342302
34 Ga0070706_100036775 3300005467 Bacteria 4523
35 Ga0070707_100013363 3300005468 Bacteria 7679
36 Ga0070707_100123229 3300005468 Bacteria 2517
37 Ga0070707_100134955 3300005468 Bacteria 2401
38 Ga0070698_100013859 3300005471 Bacteria 8525
39 Ga0070699_100000581 3300005518 Bacteria 34545
40 Ga0070699_100002585 3300005518 Bacteria 16222
41 Ga0070679_100000081 3300005530 Bacteria 71191
42 Ga0070697_100041051 3300005536 Bacteria 3744
43 Ga0070697_100181704 3300005536 Bacteria 1783
44 Ga0070696_100019509 3300005546 Unclassified 4591
45 Ga0070693_100117121 3300005547 Bacteria 1647
46 Ga0070704_100150526 3300005549 Bacteria 1829
47 Ga0068857_100013970 3300005577 Bacteria 6986
48 Ga0068856_100044357 3300005614 Bacteria 4376
49 Ga0070702_100104910 3300005615 Bacteria 1741
50 Ga0068852_100309643 3300005616 Bacteria 1531
51 Ga0068859_100023529 3300005617 Bacteria 6181
52 Ga0068859_100066796 3300005617 Bacteria 3631
53 Ga0068859_100069048 3300005617 Unclassified 3568
54 Ga0068859_100098435 3300005617 Unclassified 2979
55 Ga0068859_100348946 3300005617 Bacteria 1575
56 Ga0068859_100362646 3300005617 Bacteria 1544
57 Ga0068864_100017182 3300005618 Bacteria 6033
58 Ga0068864_100192488 3300005618 Bacteria 1870
59 Ga0068861_100001225 3300005719 Bacteria 15978
60 Ga0068870_10002641 3300005840 Bacteria 7507
61 Ga0068863_100127012 3300005841 Unclassified 2433
62 Ga0068858_100051070 3300005842 Bacteria 3826
63 Ga0068858_100144969 3300005842 Bacteria 2230
64 Ga0068860_100143985 3300005843 Unclassified 2292
65 Ga0068860_100150293 3300005843 Bacteria 2242
66 Ga0068862_100118953 3300005844 Bacteria 2326
67 Ga0081539_10000413 3300005985 Bacteria 91117
68 Ga0081539_10004341 3300005985 Bacteria 15812
69 Ga0097621_100012052 3300006237 Bacteria 6397
70 Ga0097621_100021000 3300006237 Bacteria 5041
71 Ga0097621_100103338 3300006237 Unclassified 2400
72 Ga0068871_100001344 3300006358 Bacteria 16446
73 Ga0068871_100004716 3300006358 Bacteria 9537
74 Ga0075430_100027905 3300006846 Bacteria 4795
75 Ga0075430_100095273 3300006846 Unclassified 2488
76 Ga0075431_100207359 3300006847 Unclassified 2003
77 Ga0075433_10050059 3300006852 Bacteria 3637
78 Ga0075433_10259108 3300006852 Bacteria 1542
79 Ga0075434_100105338 3300006871 Bacteria 2830
80 Ga0075434_100354058 3300006871 Bacteria 1489
81 Ga0075429_100018124 3300006880 Bacteria 6092
82 Ga0075429_100030487 3300006880 Bacteria 4685
83 Ga0075429_100203677 3300006880 Bacteria 1734
84 Ga0097620_100023528 3300006931 Bacteria 6181
85 Ga0097620_100066796 3300006931 Bacteria 3631
86 Ga0097620_100069052 3300006931 Unclassified 3568
87 Ga0097620_100098429 3300006931 Unclassified 2979
88 Ga0097620_100143726 3300006931 Bacteria 2459
89 Ga0097620_100348964 3300006931 Bacteria 1575
90 Ga0097620_100362665 3300006931 Bacteria 1544
91 Ga0075435_100099797 3300007076 Bacteria 2404
92 Ga0105240_10207599 3300009093 Bacteria 2291
93 Ga0111539_10002690 3300009094 Bacteria 23536
94 Ga0111539_10013034 3300009094 Bacteria 10404
95 Ga0105247_10002714 3300009101 Bacteria 11872
96 Ga0105247_10086002 3300009101 Unclassified 1989
97 Ga0114129_10086676 3300009147 Bacteria 4342
98 Ga0114129_10101318 3300009147 Bacteria 3985
99 Ga0114129_10128628 3300009147 Unclassified 3481
100 Ga0114129_10191063 3300009147 Bacteria 2780
101 Ga0114129_10347721 3300009147 Bacteria 1965
102 Ga0114129_10437286 3300009147 Bacteria 1718
103 Ga0114129_10659379 3300009147 Unclassified 1350
104 Ga0105243_10001165 3300009148 Bacteria 23834
105 Ga0105243_10100160 3300009148 Bacteria 2404
106 Ga0105243_10121421 3300009148 Bacteria 2203
107 Ga0105243_10417246 3300009148 Unclassified 1251
108 Ga0105242_10094111 3300009176 Bacteria 2527
109 Ga0105248_10120527 3300009177 Unclassified 2959
110 Ga0105248_10198648 3300009177 Bacteria 2259
111 Ga0105237_10003442 3300009545 Bacteria 18791
112 Ga0105238_10004865 3300009551 Bacteria 13288
113 Ga0105238_10007972 3300009551 Bacteria 10598
114 Ga0105239_10150628 3300010375 Bacteria 2596
115 Ga0157373_10028329 3300013100 Bacteria 4041
116 Ga0157374_10197452 3300013296 Bacteria 1969
117 Ga0157378_10036539 3300013297 Bacteria 4347
118 Ga0157378_10036948 3300013297 Bacteria 4324
119 Ga0157378_10048056 3300013297 Unclassified 3794
120 Ga0163162_10113460 3300013306 Bacteria 2808
121 Ga0157372_10004937 3300013307 Bacteria 14164
122 Ga0157375_10003507 3300013308 Bacteria 13605
123 Ga0157375_10010825 3300013308 Bacteria 8035
124 Ga0157375_10109149 3300013308 Unclassified 2863
125 Ga0163163_10001903 3300014325 Bacteria 17662
126 Ga0163163_10011606 3300014325 Bacteria 8003
127 Ga0163163_10070350 3300014325 Bacteria 3485
128 Ga0157380_10007036 3300014326 Bacteria 7964
129 Ga0157377_10012172 3300014745 Bacteria 4319
130 Ga0157376_10045499 3300014969 Bacteria 3614
131 Ga0207710_10008964 3300025900 Bacteria 4210
132 Ga0207647_10005841 3300025904 Bacteria 8974
133 Ga0207645_10022323 3300025907 Bacteria 4119
134 Ga0207643_10007522 3300025908 Bacteria 5848
135 Ga0207643_10050227 3300025908 Unclassified 2365
136 Ga0207684_10000030 3300025910 Bacteria 300037
137 Ga0207684_10026979 3300025910 Bacteria 4897
138 Ga0207654_10003783 3300025911 Bacteria 7629
139 Ga0207654_10049644 3300025911 Bacteria 2408
140 Ga0207707_10000007 3300025912 Bacteria 368555
141 Ga0207671_10004811 3300025914 Bacteria 12721
142 Ga0207660_10002775 3300025917 Bacteria 11480
143 Ga0207660_10179621 3300025917 Bacteria 1643
144 Ga0207652_10000062 3300025921 Bacteria 113255
145 Ga0207681_10013236 3300025923 Bacteria 5102
146 Ga0207694_10014946 3300025924 Bacteria 5854
147 Ga0207694_10045551 3300025924 Bacteria 3388
148 Ga0207650_10000001 3300025925 Bacteria 1545726
149 Ga0207650_10029565 3300025925 Bacteria 3940
150 Ga0207644_10029114 3300025931 Bacteria 3828
151 Ga0207644_10063175 3300025931 Bacteria 2688
152 Ga0207690_10172272 3300025932 Unclassified 1623
153 Ga0207706_10182436 3300025933 Unclassified 1843
154 Ga0207709_10000786 3300025935 Bacteria 24857
155 Ga0207670_10001298 3300025936 Bacteria 13179
156 Ga0207670_10093068 3300025936 Bacteria 2135
157 Ga0207665_10045025 3300025939 Unclassified 2954
158 Ga0207711_10037035 3300025941 Bacteria 4141
159 Ga0207711_10135951 3300025941 Bacteria 2208
160 Ga0207689_10009146 3300025942 Bacteria 8575
161 Ga0207689_10307026 3300025942 Bacteria 1315
162 Ga0207651_10134064 3300025960 Unclassified 1902
163 Ga0207712_10027966 3300025961 Bacteria 3768
164 Ga0207712_10030392 3300025961 Bacteria 3631
165 Ga0207640_10264118 3300025981 Bacteria 1343
166 Ga0207640_10292957 3300025981 Bacteria 1284
167 Ga0207677_10014234 3300026023 Bacteria 4638
168 Ga0207677_10050019 3300026023 Bacteria 2825
169 Ga0207703_10141641 3300026035 Unclassified 2087
170 Ga0207639_10294362 3300026041 Bacteria 1432
171 Ga0207708_10035858 3300026075 Bacteria 3773
172 Ga0207708_10179089 3300026075 Bacteria 1683
173 Ga0207641_10076021 3300026088 Unclassified 2902
174 Ga0207648_10012283 3300026089 Bacteria 8018
175 Ga0207676_10019087 3300026095 Unclassified 4996
176 Ga0207674_10045651 3300026116 Bacteria 4505
177 Ga0207674_10140773 3300026116 Bacteria 2372
178 Ga0207698_10039594 3300026142 Unclassified 3494
179 Ga0207698_10066757 3300026142 Bacteria 2833
180 Ga0207428_10008185 3300027907 Bacteria 9463
181 Ga0268265_10150025 3300028380 Bacteria 1965
182 Ga0268264_10090246 3300028381 Bacteria 2640
183 Ga0268264_10336722 3300028381 Unclassified 1432
184 Ga0307513_10100947 3300031456 Unclassified 2909
185 Ga0307408_100009272 3300031548 Bacteria 6487
186 Ga0307405_10013018 3300031731 Bacteria 4426
187 Ga0307413_10042474 3300031824 Bacteria 2672
188 Ga0307413_10090926 3300031824 Bacteria 1987
189 Ga0307410_10010323 3300031852 Bacteria 5283
190 Ga0307406_10038975 3300031901 Bacteria 2944
191 Ga0307407_10027513 3300031903 Bacteria 3027
192 Ga0307412_10007074 3300031911 Bacteria 6368
193 Ga0307416_100081971 3300032002 Bacteria 2730
194 Ga0307414_10005688 3300032004 Bacteria 6881
195 Ga0307415_100004935 3300032126 Bacteria 7015
196 Ga0307415_100071049 3300032126 Bacteria 2446
197 Ga0373951_0003923 3300035091 Bacteria 3574
198 Ga0395898_0378419 3300037466 Bacteria 1350
199 Ga0395905_0141289 3300037471 Unclassified 2265
200 Ga0436365_0378742 3300039437 Bacteria 86499
201 Ga0439455_0010096 3300042012 Unclassified 2066
202 Ga0439458_0002433 3300042157 Unclassified 4544
203 Ga0496102_0156373 3300048905 Unclassified 2143
204 Ga0496107_0183987 3300048910 Bacteria 1552
205 Ga0496108_0078582 3300048911 Bacteria 2793
206 Ga0496112_0103956 3300048915 Bacteria 2811
207 Ga0496112_0185332 3300048915 Bacteria 2045
208 Ga0496112_0563749 3300048915 Bacteria 1072
209 Ga0496113_0049544 3300048916 Bacteria 3128
210 Ga0501298_002213 3300049521 Bacteria 2931
211 Ga0501298_004832 3300049521 Bacteria 2142
212 Ga0501298_010779 3300049521 Bacteria 1578
213 Ga0501299_001446 3300049522 Bacteria 3059
214 Ga0501299_006490 3300049522 Bacteria 1836
215 Ga0501038_0003308 3300049574 Bacteria 15029
216 Ga0501198_002652 3300049649 Bacteria 2419
217 Ga0501202_001056 3300049652 Bacteria 4271
218 Ga0501207_000748 3300049654 Bacteria 3840
219 Ga0501216_001436 3300049660 Bacteria 3213
220 Ga0501217_000171 3300049661 Bacteria 9382
221 Ga0501217_003549 3300049661 Bacteria 3158
222 Ga0501223_001039 3300049663 Bacteria 6557
223 Ga0501223_001474 3300049663 Bacteria 5443
224 Ga0501227_001842 3300049665 Bacteria 4702
225 Ga0501227_016006 3300049665 Bacteria 1681
226 Ga0501233_003859 3300049668 Bacteria 2715
227 Ga0501233_005184 3300049668 Unclassified 2412
228 Ga0501249_009476 3300049679 Bacteria 2027
229 Ga0501225_0001621 3300049705 Bacteria 7031
230 Ga0501234_005342 3300049707 Bacteria 2010
231 Ga0501234_008172 3300049707 Bacteria 1636
232 Ga0501283_005710 3300049779 Bacteria 1719
233 nmdc:mga05p37_196163_c1 3300050507 Bacteria 1972
234 nmdc:mga05p37_83576_c1 3300050507 Unclassified 3933
235 nmdc:mga09592_83065_c1 3300050508 Unclassified 2730
236 nmdc:mga0qj67_28819_c1 3300050509 Unclassified 4311
237 nmdc:mga06r32_137190_c1 3300050510 Unclassified 2421
238 nmdc:mga08y16_2206_c1 3300050511 Bacteria 19973
239 nmdc:mga08y16_71375_c1 3300050511 Bacteria 3025
240 nmdc:mga0n895_16349_c1 3300050512 Bacteria 6803
241 nmdc:mga0n895_212517_c1 3300050512 Bacteria 1964
242 nmdc:mga0n895_54564_c1 3300050512 Bacteria 3931
243 nmdc:mga0n895_84369_c1 3300050512 Bacteria 3169
244 nmdc:mga0rr50_100149_c1 3300050513 Bacteria 2275
245 nmdc:mga08x19_26322_c1 3300050514 Bacteria 3629
246 nmdc:mga0a205_44698_c1 3300050515 Bacteria 4270
247 nmdc:mga0a205_65993_c1 3300050515 Bacteria 3497
248 nmdc:mga0a205_67802_c1 3300050515 Bacteria 3446
249 Ga0500616_0026844 3300053153 Unclassified 3183

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025981 Ga0207640_10264118 Ga0207640_102641182 301
2 3300049707 Ga0501234_008172 Ga0501234_008172_598_1626 328
3 3300049779 Ga0501283_005710 Ga0501283_005710_12_1040 328
4 3300009148 Ga0105243_10417246 Ga0105243_104172461 330
5 3300048915 Ga0496112_0563749 Ga0496112_0563749_56_1060 334
6 3300049668 Ga0501233_003859 Ga0501233_003859_58_1089 336
7 3300009147 Ga0114129_10659379 Ga0114129_106593791 338
8 3300026116 Ga0207674_10140773 Ga0207674_101407732 338
9 3300025939 Ga0207665_10045025 Ga0207665_100450251 352
10 3300005458 Ga0070681_10022503 Ga0070681_100225034 358
11 3300025917 Ga0207660_10179621 Ga0207660_101796212 358
12 3300053153 Ga0500616_0026844 Ga0500616_0026844_668_1798 358
13 3300009147 Ga0114129_10128628 Ga0114129_101286281 362
14 3300050507 nmdc:mga05p37_83576_c1 nmdc:mga05p37_83576_c1_2212_3324 362
15 3300050515 nmdc:mga0a205_65993_c1 nmdc:mga0a205_65993_c1_113_1225 362
16 3300005336 Ga0070680_100001381 Ga0070680_10000138113 363
17 3300005458 Ga0070681_10000359 Ga0070681_1000035920 363
18 3300005468 Ga0070707_100134955 Ga0070707_1001349551 363
19 3300005530 Ga0070679_100000081 Ga0070679_10000008118 363
20 3300005614 Ga0068856_100044357 Ga0068856_1000443572 363
21 3300006852 Ga0075433_10050059 Ga0075433_100500593 363
22 3300006871 Ga0075434_100105338 Ga0075434_1001053382 363
23 3300010375 Ga0105239_10150628 Ga0105239_101506282 363
24 3300025912 Ga0207707_10000007 Ga0207707_1000000758 363
25 3300025917 Ga0207660_10002775 Ga0207660_100027752 363
26 3300025921 Ga0207652_10000062 Ga0207652_1000006240 363
27 3300025942 Ga0207689_10307026 Ga0207689_103070261 363
28 3300025961 Ga0207712_10030392 Ga0207712_100303922 363
29 3300048905 Ga0496102_0156373 Ga0496102_0156373_123_1238 363
30 3300050512 nmdc:mga0n895_16349_c1 nmdc:mga0n895_16349_c1_4920_6035 363
31 3300050512 nmdc:mga0n895_84369_c1 nmdc:mga0n895_84369_c1_280_1395 363
32 3300050515 nmdc:mga0a205_44698_c1 nmdc:mga0a205_44698_c1_1889_3004 363
33 3300009148 Ga0105243_10121421 Ga0105243_101214211 364
34 3300025981 Ga0207640_10292957 Ga0207640_102929571 364
35 3300005468 Ga0070707_100123229 Ga0070707_1001232292 366
36 3300050509 nmdc:mga0qj67_28819_c1 nmdc:mga0qj67_28819_c1_1077_2192 366
37 3300002459 JGI24751J29686_10000011 JGI24751J29686_1000001164 367
38 3300003322 rootL2_10067598 rootL2_100675984 367
39 3300005290 Ga0065712_10076554 Ga0065712_100765544 367
40 3300005331 Ga0070670_100000295 Ga0070670_10000029511 367
41 3300005331 Ga0070670_100034143 Ga0070670_1000341432 367
42 3300005340 Ga0070689_100282300 Ga0070689_1002823001 367
43 3300005353 Ga0070669_100027307 Ga0070669_1000273072 367
44 3300005355 Ga0070671_100019124 Ga0070671_1000191244 367
45 3300005366 Ga0070659_100072621 Ga0070659_1000726212 367
46 3300005438 Ga0070701_10111226 Ga0070701_101112262 367
47 3300005616 Ga0068852_100309643 Ga0068852_1003096432 367
48 3300005617 Ga0068859_100098435 Ga0068859_1000984352 367
49 3300005617 Ga0068859_100348946 Ga0068859_1003489462 367
50 3300005985 Ga0081539_10000413 Ga0081539_1000041330 367
51 3300006931 Ga0097620_100098429 Ga0097620_1000984292 367
52 3300006931 Ga0097620_100348964 Ga0097620_1003489642 367
53 3300009101 Ga0105247_10002714 Ga0105247_100027146 367
54 3300009147 Ga0114129_10101318 Ga0114129_101013181 367
55 3300009551 Ga0105238_10007972 Ga0105238_100079721 367
56 3300013306 Ga0163162_10113460 Ga0163162_101134602 367
57 3300014325 Ga0163163_10001903 Ga0163163_1000190314 367
58 3300025900 Ga0207710_10008964 Ga0207710_100089643 367
59 3300025908 Ga0207643_10050227 Ga0207643_100502272 367
60 3300025923 Ga0207681_10013236 Ga0207681_100132365 367
61 3300025924 Ga0207694_10014946 Ga0207694_100149465 367
62 3300025925 Ga0207650_10000001 Ga0207650_10000001719 367
63 3300025925 Ga0207650_10029565 Ga0207650_100295652 367
64 3300025931 Ga0207644_10029114 Ga0207644_100291142 367
65 3300025932 Ga0207690_10172272 Ga0207690_101722722 367
66 3300025960 Ga0207651_10134064 Ga0207651_101340641 367
67 3300025961 Ga0207712_10027966 Ga0207712_100279662 367
68 3300026035 Ga0207703_10141641 Ga0207703_101416412 367
69 3300026041 Ga0207639_10294362 Ga0207639_102943621 367
70 3300026075 Ga0207708_10179089 Ga0207708_101790892 367
71 3300026142 Ga0207698_10039594 Ga0207698_100395942 367
72 3300035091 Ga0373951_0003923 Ga0373951_0003923_121_1224 367
73 3300037471 Ga0395905_0141289 Ga0395905_0141289_1060_2181 367
74 3300048910 Ga0496107_0183987 Ga0496107_0183987_19_1122 367
75 3300048911 Ga0496108_0078582 Ga0496108_0078582_40_1143 367
76 3300048915 Ga0496112_0103956 Ga0496112_0103956_381_1484 367
77 3300005293 Ga0065715_10090488 Ga0065715_100904884 368
78 3300005295 Ga0065707_10034621 Ga0065707_100346211 368
79 3300005295 Ga0065707_10101364 Ga0065707_101013641 368
80 3300005331 Ga0070670_100210573 Ga0070670_1002105732 368
81 3300005334 Ga0068869_100081643 Ga0068869_1000816432 368
82 3300005340 Ga0070689_100009841 Ga0070689_1000098414 368
83 3300005355 Ga0070671_100089477 Ga0070671_1000894772 368
84 3300005441 Ga0070700_100094285 Ga0070700_1000942852 368
85 3300005441 Ga0070700_100166970 Ga0070700_1001669702 368
86 3300005445 Ga0070708_100001824 Ga0070708_1000018242 368
87 3300005459 Ga0068867_100017457 Ga0068867_1000174571 368
88 3300005466 Ga0070685_10205937 Ga0070685_102059371 368
89 3300005467 Ga0070706_100036775 Ga0070706_1000367752 368
90 3300005468 Ga0070707_100013363 Ga0070707_1000133633 368
91 3300005471 Ga0070698_100013859 Ga0070698_1000138592 368
92 3300005518 Ga0070699_100002585 Ga0070699_1000025852 368
93 3300005536 Ga0070697_100041051 Ga0070697_1000410514 368
94 3300005536 Ga0070697_100181704 Ga0070697_1001817041 368
95 3300005547 Ga0070693_100117121 Ga0070693_1001171211 368
96 3300005577 Ga0068857_100013970 Ga0068857_1000139705 368
97 3300005617 Ga0068859_100362646 Ga0068859_1003626462 368
98 3300005618 Ga0068864_100017182 Ga0068864_1000171822 368
99 3300005618 Ga0068864_100192488 Ga0068864_1001924882 368
100 3300005719 Ga0068861_100001225 Ga0068861_1000012252 368
101 3300005840 Ga0068870_10002641 Ga0068870_100026415 368
102 3300005841 Ga0068863_100127012 Ga0068863_1001270122 368
103 3300005842 Ga0068858_100144969 Ga0068858_1001449692 368
104 3300005844 Ga0068862_100118953 Ga0068862_1001189532 368
105 3300005985 Ga0081539_10004341 Ga0081539_1000434111 368
106 3300006237 Ga0097621_100012052 Ga0097621_1000120522 368
107 3300006237 Ga0097621_100103338 Ga0097621_1001033382 368
108 3300006358 Ga0068871_100001344 Ga0068871_10000134413 368
109 3300006846 Ga0075430_100027905 Ga0075430_1000279056 368
110 3300006846 Ga0075430_100095273 Ga0075430_1000952732 368
111 3300006852 Ga0075433_10259108 Ga0075433_102591082 368
112 3300006871 Ga0075434_100354058 Ga0075434_1003540582 368
113 3300006880 Ga0075429_100018124 Ga0075429_1000181245 368
114 3300006931 Ga0097620_100143726 Ga0097620_1001437261 368
115 3300006931 Ga0097620_100362665 Ga0097620_1003626652 368
116 3300009094 Ga0111539_10013034 Ga0111539_100130346 368
117 3300009147 Ga0114129_10086676 Ga0114129_100866763 368
118 3300009147 Ga0114129_10347721 Ga0114129_103477212 368
119 3300009147 Ga0114129_10437286 Ga0114129_104372862 368
120 3300009148 Ga0105243_10001165 Ga0105243_1000116514 368
121 3300009177 Ga0105248_10198648 Ga0105248_101986481 368
122 3300013100 Ga0157373_10028329 Ga0157373_100283294 368
123 3300013296 Ga0157374_10197452 Ga0157374_101974522 368
124 3300013297 Ga0157378_10036539 Ga0157378_100365394 368
125 3300013297 Ga0157378_10048056 Ga0157378_100480562 368
126 3300013308 Ga0157375_10003507 Ga0157375_100035076 368
127 3300013308 Ga0157375_10109149 Ga0157375_101091492 368
128 3300014325 Ga0163163_10070350 Ga0163163_100703503 368
129 3300014326 Ga0157380_10007036 Ga0157380_100070365 368
130 3300014969 Ga0157376_10045499 Ga0157376_100454992 368
131 3300025907 Ga0207645_10022323 Ga0207645_100223233 368
132 3300025908 Ga0207643_10007522 Ga0207643_100075226 368
133 3300025910 Ga0207684_10026979 Ga0207684_100269794 368
134 3300025911 Ga0207654_10003783 Ga0207654_100037836 368
135 3300025931 Ga0207644_10063175 Ga0207644_100631752 368
136 3300025933 Ga0207706_10182436 Ga0207706_101824361 368
137 3300025935 Ga0207709_10000786 Ga0207709_1000078618 368
138 3300025936 Ga0207670_10001298 Ga0207670_1000129812 368
139 3300025936 Ga0207670_10093068 Ga0207670_100930682 368
140 3300025941 Ga0207711_10037035 Ga0207711_100370352 368
141 3300025942 Ga0207689_10009146 Ga0207689_100091466 368
142 3300026023 Ga0207677_10014234 Ga0207677_100142342 368
143 3300026075 Ga0207708_10035858 Ga0207708_100358582 368
144 3300026088 Ga0207641_10076021 Ga0207641_100760211 368
145 3300026089 Ga0207648_10012283 Ga0207648_100122835 368
146 3300026095 Ga0207676_10019087 Ga0207676_100190873 368
147 3300026116 Ga0207674_10045651 Ga0207674_100456512 368
148 3300026142 Ga0207698_10066757 Ga0207698_100667572 368
149 3300028380 Ga0268265_10150025 Ga0268265_101500252 368
150 3300028381 Ga0268264_10336722 Ga0268264_103367222 368
151 3300031456 Ga0307513_10100947 Ga0307513_101009472 368
152 3300031824 Ga0307413_10090926 Ga0307413_100909261 368
153 3300032126 Ga0307415_100071049 Ga0307415_1000710492 368
154 3300039437 Ga0436365_0378742 Ga0436365_0378742_16662_17804 368
155 3300048915 Ga0496112_0185332 Ga0496112_0185332_342_1466 368
156 3300049521 Ga0501298_002213 Ga0501298_002213_411_1541 368
157 3300049522 Ga0501299_001446 Ga0501299_001446_730_1860 368
158 3300049574 Ga0501038_0003308 Ga0501038_0003308_12626_13756 368
159 3300049661 Ga0501217_003549 Ga0501217_003549_1470_2600 368
160 3300049679 Ga0501249_009476 Ga0501249_009476_446_1576 368
161 3300050511 nmdc:mga08y16_71375_c1 nmdc:mga08y16_71375_c1_928_2055 368
162 3300050512 nmdc:mga0n895_212517_c1 nmdc:mga0n895_212517_c1_179_1309 368
163 3300050514 nmdc:mga08x19_26322_c1 nmdc:mga08x19_26322_c1_1656_2786 368
164 2162886007 SwRhRL2b_contig_3347381 SwRhRL2b_0078.00001110 369
165 3300005288 Ga0065714_10064818 Ga0065714_100648181 369
166 3300005289 Ga0065704_10085221 Ga0065704_100852212 369
167 3300005290 Ga0065712_10067985 Ga0065712_100679851 369
168 3300005293 Ga0065715_10118772 Ga0065715_101187722 369
169 3300005295 Ga0065707_10087763 Ga0065707_100877632 369
170 3300005440 Ga0070705_100026606 Ga0070705_1000266062 369
171 3300005467 Ga0070706_100000001 Ga0070706_10000000133 369
172 3300005518 Ga0070699_100000581 Ga0070699_10000058136 369
173 3300005546 Ga0070696_100019509 Ga0070696_1000195095 369
174 3300005549 Ga0070704_100150526 Ga0070704_1001505261 369
175 3300005615 Ga0070702_100104910 Ga0070702_1001049102 369
176 3300005617 Ga0068859_100023529 Ga0068859_1000235291 369
177 3300005617 Ga0068859_100066796 Ga0068859_1000667962 369
178 3300005617 Ga0068859_100069048 Ga0068859_1000690482 369
179 3300005842 Ga0068858_100051070 Ga0068858_1000510702 369
180 3300005843 Ga0068860_100143985 Ga0068860_1001439852 369
181 3300005843 Ga0068860_100150293 Ga0068860_1001502933 369
182 3300006237 Ga0097621_100021000 Ga0097621_1000210003 369
183 3300006358 Ga0068871_100004716 Ga0068871_1000047165 369
184 3300006847 Ga0075431_100207359 Ga0075431_1002073592 369
185 3300006880 Ga0075429_100030487 Ga0075429_1000304874 369
186 3300006880 Ga0075429_100203677 Ga0075429_1002036772 369
187 3300006931 Ga0097620_100023528 Ga0097620_1000235281 369
188 3300006931 Ga0097620_100066796 Ga0097620_1000667962 369
189 3300006931 Ga0097620_100069052 Ga0097620_1000690522 369
190 3300007076 Ga0075435_100099797 Ga0075435_1000997972 369
191 3300009093 Ga0105240_10207599 Ga0105240_102075992 369
192 3300009094 Ga0111539_10002690 Ga0111539_1000269013 369
193 3300009101 Ga0105247_10086002 Ga0105247_100860022 369
194 3300009147 Ga0114129_10191063 Ga0114129_101910632 369
195 3300009148 Ga0105243_10100160 Ga0105243_101001602 369
196 3300009176 Ga0105242_10094111 Ga0105242_100941112 369
197 3300009177 Ga0105248_10120527 Ga0105248_101205271 369
198 3300009545 Ga0105237_10003442 Ga0105237_1000344214 369
199 3300009551 Ga0105238_10004865 Ga0105238_100048656 369
200 3300013297 Ga0157378_10036948 Ga0157378_100369483 369
201 3300013307 Ga0157372_10004937 Ga0157372_1000493712 369
202 3300013308 Ga0157375_10010825 Ga0157375_100108257 369
203 3300014325 Ga0163163_10011606 Ga0163163_100116067 369
204 3300014745 Ga0157377_10012172 Ga0157377_100121722 369
205 3300025904 Ga0207647_10005841 Ga0207647_100058414 369
206 3300025910 Ga0207684_10000030 Ga0207684_10000030208 369
207 3300025911 Ga0207654_10049644 Ga0207654_100496442 369
208 3300025914 Ga0207671_10004811 Ga0207671_100048115 369
209 3300025924 Ga0207694_10045551 Ga0207694_100455512 369
210 3300025941 Ga0207711_10135951 Ga0207711_101359511 369
211 3300026023 Ga0207677_10050019 Ga0207677_100500192 369
212 3300027907 Ga0207428_10008185 Ga0207428_100081856 369
213 3300028381 Ga0268264_10090246 Ga0268264_100902462 369
214 3300031548 Ga0307408_100009272 Ga0307408_1000092726 369
215 3300031731 Ga0307405_10013018 Ga0307405_100130182 369
216 3300031824 Ga0307413_10042474 Ga0307413_100424742 369
217 3300031852 Ga0307410_10010323 Ga0307410_100103232 369
218 3300031901 Ga0307406_10038975 Ga0307406_100389752 369
219 3300031903 Ga0307407_10027513 Ga0307407_100275132 369
220 3300031911 Ga0307412_10007074 Ga0307412_100070743 369
221 3300032002 Ga0307416_100081971 Ga0307416_1000819712 369
222 3300032004 Ga0307414_10005688 Ga0307414_100056882 369
223 3300032126 Ga0307415_100004935 Ga0307415_1000049352 369
224 3300037466 Ga0395898_0378419 Ga0395898_0378419_211_1326 369
225 3300042012 Ga0439455_0010096 Ga0439455_0010096_612_1727 369
226 3300042157 Ga0439458_0002433 Ga0439458_0002433_2355_3470 369
227 3300048916 Ga0496113_0049544 Ga0496113_0049544_757_1893 369
228 3300049521 Ga0501298_004832 Ga0501298_004832_368_1483 369
229 3300049521 Ga0501298_010779 Ga0501298_010779_31_1167 369
230 3300049522 Ga0501299_006490 Ga0501299_006490_199_1320 369
231 3300049649 Ga0501198_002652 Ga0501198_002652_930_2045 369
232 3300049652 Ga0501202_001056 Ga0501202_001056_2551_3666 369
233 3300049654 Ga0501207_000748 Ga0501207_000748_2174_3289 369
234 3300049660 Ga0501216_001436 Ga0501216_001436_1912_3027 369
235 3300049661 Ga0501217_000171 Ga0501217_000171_2199_3314 369
236 3300049663 Ga0501223_001039 Ga0501223_001039_2224_3339 369
237 3300049663 Ga0501223_001474 Ga0501223_001474_2702_3838 369
238 3300049665 Ga0501227_001842 Ga0501227_001842_664_1779 369
239 3300049665 Ga0501227_016006 Ga0501227_016006_47_1183 369
240 3300049668 Ga0501233_005184 Ga0501233_005184_704_1819 369
241 3300049705 Ga0501225_0001621 Ga0501225_0001621_2720_3835 369
242 3300049707 Ga0501234_005342 Ga0501234_005342_279_1394 369
243 3300050507 nmdc:mga05p37_196163_c1 nmdc:mga05p37_196163_c1_325_1461 369
244 3300050508 nmdc:mga09592_83065_c1 nmdc:mga09592_83065_c1_575_1699 369
245 3300050510 nmdc:mga06r32_137190_c1 nmdc:mga06r32_137190_c1_13_1137 369
246 3300050511 nmdc:mga08y16_2206_c1 nmdc:mga08y16_2206_c1_9762_10871 369
247 3300050512 nmdc:mga0n895_54564_c1 nmdc:mga0n895_54564_c1_2214_3338 369
248 3300050513 nmdc:mga0rr50_100149_c1 nmdc:mga0rr50_100149_c1_665_1795 369
249 3300050515 nmdc:mga0a205_67802_c1 nmdc:mga0a205_67802_c1_1411_2535 369

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07687

M20_dimer

Peptidase dimerisation domain

207

319

0.96

PF01546

Peptidase_M20

Peptidase family M20/M25/M40

108

409

0.92

PF04389

Peptidase_M28

Peptidase family M28

95

199

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
7uoi-assembly1.cif.gz_A-2 crystallographic structure of dape from enterococcus faecium 0.8591 1 368
7uoi-assembly1.cif.gz_A-2 crystallographic structure of dape from enterococcus faecium 0.8548 1 368
7rsf-assembly1.cif.gz_B acetylornithine deacetylase from escherichia coli 0.8508 2 367
7rsf-assembly1.cif.gz_B acetylornithine deacetylase from escherichia coli 0.8424 2 367
1q7l-assembly1.cif.gz_A zn-binding domain of the t347g mutant of human aminoacylase-i 0.8195 4 153
ID Description Score Start End Superfamily
af_Q4CR09_181_288_3.30.70.360 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.8908 167 268 3.30.70.360
af_P23908_15_171_3.40.630.10 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.8851 10 157 3.40.630.10
af_P23908_180_301_3.30.70.360 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.879 166 283 3.30.70.360
af_Q4D7V2_11_385_3.40.630.10 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.8712 9 363 3.40.630.10
af_Q57899_2_199_3.40.630.10 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.8699 2 143 3.40.630.10
ID Description Score Start End GO Terms
AF-Q2ING1-F1-model_v4 Acetylornithine deacetylase (EC 3.5.1.16) 0.9426 2 368 GO:0005737
GO:0006526
GO:0008777
GO:0046872
AF-A0A2W5VRV3-F1-model_v4 Acetylornithine deacetylase 0.938 2 368 GO:0005737
GO:0006526
GO:0008777
GO:0009014
GO:0046872
AF-Q2ING1-F1-model_v4 Acetylornithine deacetylase (EC 3.5.1.16) 0.9353 2 368 GO:0005737
GO:0006526
GO:0008777
GO:0046872
AF-A0A2W5VRV3-F1-model_v4 Acetylornithine deacetylase 0.9307 2 368 GO:0005737
GO:0006526
GO:0008777
GO:0009014
GO:0046872
AF-A0A7W0MHT6-F1-model_v4 Acetylornithine deacetylase (EC 3.5.1.16) 0.9299 1 291 GO:0005737
GO:0006526
GO:0008777

Feature Viewer

pLDDT pTM Quality
90.84 0.88 High
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Predicted Structure (AlphaFold2)

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