F360119

General Info

Members Datasets Scaffolds Average Seq Length
248 187 496 436

Family's Representative Sequence

Representative Sequence 3300044712|Ga0453684_0021189|Ga0453684_0021189_2407_4083
Length 512
Sequence LLEALQCNVSALPFGGHDVAVTEVTLTKTDIGLNKQTIEALSQSKNEPSWVLARRLEAWHLYEETPMPASNDELWRRTKVDKIDFASIIPFSDKSGNALKSLPVKFQQVAQDKNAAGIVSQYNSHGSFARLASDLKKQGVIFCDIDTAIQEHPELVKQYLMTQAVTYTENRYSSAKPSTNESGKHEGGGYGNTIGDLKFVALHAAFFSGGTFLYVPRNVSIDLPLQTLTYFDAPNVGMFTHSVVVVDEGASVKLIENYASKETEEQRFSSGAVELILKPGSNLQYFHLQDYAHNAWHFTSQTALLADNTSLTWLSGTLGSQTTKAFLDCKMLGKGANANLLGFFFGDSDQHFDQHTFQNHIVGNSASDLLFKGALKDKAYSAFRGLIRVNPQAQRSDAYQANRNILLSDASHADSIPELEIEANDVRCTHGATVGPIDPEQIFYLQARGIPQNEAEQLIVEGFFDALMGKIPLEAIRNELSQAIRTKIGIAQEPEIKTPRAVRKAVVTSPKR

Samples

Sample ID Description Type Environment
1 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
17 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
24 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
25 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
26 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
27 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
31 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
32 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
33 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
34 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
35 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
36 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
37 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
38 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
39 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
40 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
41 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
42 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
43 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
44 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
45 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
46 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
47 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
48 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
49 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
50 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
51 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
53 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
54 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
56 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
58 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
59 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
60 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
61 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
62 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
63 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
64 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
65 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
66 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
67 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
68 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
69 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
70 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
71 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
72 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
105 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
106 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
107 3300029276 Sorghum rhizosphere microbial communities from UC West Side Research & Extension Center, Five Points, CA, USA - TP3.B1.ctcc.R1 Metatranscriptome Rhizosphere
108 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
109 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
110 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
111 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
112 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
113 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
114 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
115 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
116 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
117 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
118 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
119 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
120 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
121 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
122 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
123 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
124 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
125 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
126 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
127 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
128 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
129 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
130 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
131 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
132 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
133 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
134 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
135 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
136 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
137 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
138 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
139 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
140 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
141 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
142 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
143 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
144 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
145 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
146 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
147 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
148 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
149 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
150 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
151 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
152 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
153 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
154 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
155 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
159 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
160 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
161 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
162 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
163 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
164 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
165 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
166 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
167 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
168 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
169 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
170 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
171 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
172 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
173 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
174 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
175 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
176 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
177 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
178 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
179 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
180 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
181 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
182 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
183 2684623219 Planctomyces sp. SH-PL14 Isolate Unclassified
184 2687453257 Planctomyces sp. SH-PL62 Isolate Unclassified
185 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified
186 2889415604 Paludisphaera rhizosphaerae JC665 Isolate Rhizosphere
187 2920107658 Aquisphaera insulae JC669 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.76
Metatranscriptomes 3.23
Isolates 2.02

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.44
Nodule 0
Rhizoplane 3.63
Rhizosphere 88.31
Stem 0
Stem Tuber 0
Unclassified 0.81

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0453684_0021189 3300044712 Bacteria 9730
2 SwRhRL2b_contig_101279 2162886007 Bacteria 2173
3 rootH2_10012998 3300003320 Bacteria 14672
4 rootH2_10187852 3300003320 Bacteria 3655
5 rootL2_10131673 3300003322 Bacteria 8810
6 Ga0065704_10084337 3300005289 Bacteria 3346
7 Ga0070658_10000785 3300005327 Bacteria 27211
8 Ga0070683_100098719 3300005329 Bacteria 2748
9 Ga0070682_100013747 3300005337 Bacteria 4666
10 Ga0068868_100129564 3300005338 Bacteria 2063
11 Ga0070660_100009829 3300005339 Bacteria 6745
12 Ga0070687_100000751 3300005343 Bacteria 10754
13 Ga0070671_100072920 3300005355 Unclassified 2868
14 Ga0070659_100002918 3300005366 Bacteria 12183
15 Ga0070714_100000015 3300005435 Bacteria 208308
16 Ga0070708_100001592 3300005445 Bacteria 17392
17 Ga0070708_100015529 3300005445 Bacteria 6292
18 Ga0070708_100035511 3300005445 Bacteria 4343
19 Ga0070708_100184161 3300005445 Bacteria 1953
20 Ga0070662_100000428 3300005457 Bacteria 24890
21 Ga0070662_100003271 3300005457 Bacteria 10081
22 Ga0068867_100030440 3300005459 Bacteria 3894
23 Ga0070707_100041397 3300005468 Bacteria 4409
24 Ga0070707_100104431 3300005468 Bacteria 2747
25 Ga0070707_100155708 3300005468 Bacteria 2226
26 Ga0070698_100024252 3300005471 Bacteria 6330
27 Ga0070684_100007908 3300005535 Bacteria 8295
28 Ga0070697_100172154 3300005536 Bacteria 1833
29 Ga0068853_100018447 3300005539 Bacteria 5775
30 Ga0068853_100059738 3300005539 Bacteria 3294
31 Ga0070672_100011470 3300005543 Bacteria 6182
32 Ga0070686_100000015 3300005544 Bacteria 158823
33 Ga0070695_100083873 3300005545 Bacteria 2113
34 Ga0070695_100096939 3300005545 Bacteria 1979
35 Ga0070696_100038311 3300005546 Bacteria 3308
36 Ga0070696_100134916 3300005546 Bacteria 1799
37 Ga0070693_100066228 3300005547 Bacteria 2114
38 Ga0070665_100000481 3300005548 Bacteria 57473
39 Ga0070665_100291854 3300005548 Bacteria 1633
40 Ga0068855_100002693 3300005563 Bacteria 21898
41 Ga0068854_100079088 3300005578 Bacteria 2424
42 Ga0068852_100042840 3300005616 Bacteria 3834
43 Ga0068852_100088145 3300005616 Bacteria 2771
44 Ga0068859_100050991 3300005617 Bacteria 4159
45 Ga0068864_100019341 3300005618 Bacteria 5693
46 Ga0068851_10012447 3300005834 Bacteria 4011
47 Ga0068870_10031101 3300005840 Bacteria 2702
48 Ga0068858_100005610 3300005842 Bacteria 12270
49 Ga0068858_100012244 3300005842 Bacteria 8087
50 Ga0068862_100165430 3300005844 Bacteria 1977
51 Ga0081455_10154300 3300005937 Bacteria 1767
52 Ga0070717_10000037 3300006028 Bacteria 121470
53 Ga0075365_10024789 3300006038 Bacteria 3790
54 Ga0075368_10062177 3300006042 Bacteria 1496
55 Ga0075363_100033580 3300006048 Bacteria 2673
56 Ga0075363_100038177 3300006048 Bacteria 2525
57 Ga0075367_10074049 3300006178 Bacteria 2053
58 Ga0075428_100135629 3300006844 Bacteria 2676
59 Ga0075430_100045002 3300006846 Bacteria 3730
60 Ga0075431_100111419 3300006847 Bacteria 2824
61 Ga0075433_10000162 3300006852 Bacteria 36387
62 Ga0075434_100001986 3300006871 Bacteria 17749
63 Ga0068865_100002387 3300006881 Bacteria 11074
64 Ga0075436_100005197 3300006914 Bacteria 8960
65 Ga0097620_100050993 3300006931 Bacteria 4159
66 Ga0075435_100000289 3300007076 Bacteria 31160
67 Ga0075435_100030355 3300007076 Bacteria 4249
68 Ga0105240_10000057 3300009093 Bacteria 222664
69 Ga0111539_10031237 3300009094 Bacteria 6471
70 Ga0111539_10271846 3300009094 Bacteria 1972
71 Ga0105245_10016779 3300009098 Bacteria 6394
72 Ga0114129_10035074 3300009147 Bacteria 7087
73 Ga0114129_10128775 3300009147 Bacteria 3478
74 Ga0114129_10198389 3300009147 Bacteria 2720
75 Ga0105243_10042883 3300009148 Bacteria 3544
76 Ga0105242_10271795 3300009176 Bacteria 1536
77 Ga0105248_10005785 3300009177 Bacteria 13590
78 Ga0105237_10006273 3300009545 Bacteria 13225
79 Ga0105237_10041664 3300009545 Bacteria 4631
80 Ga0105238_10000025 3300009551 Bacteria 196198
81 Ga0105238_10000667 3300009551 Bacteria 36055
82 Ga0105239_10195061 3300010375 Archaea 2268
83 Ga0157374_10004213 3300013296 Bacteria 12087
84 Ga0163163_10115144 3300014325 Bacteria 2720
85 Ga0157380_10095907 3300014326 Bacteria 2458
86 Ga0157377_10053800 3300014745 Bacteria 2277
87 Ga0157379_10020228 3300014968 Bacteria 5883
88 Ga0157376_10005050 3300014969 Bacteria 9202
89 Ga0197907_10504693 3300020069 Bacteria 2172
90 Ga0213875_10039236 3300021388 Bacteria 2231
91 Ga0224712_10002562 3300022467 Bacteria 4519
92 Ga0207688_10053212 3300025901 Bacteria 2270
93 Ga0207699_10019324 3300025906 Bacteria 3631
94 Ga0207643_10065841 3300025908 Bacteria 2077
95 Ga0207705_10009842 3300025909 Bacteria 6958
96 Ga0207695_10000072 3300025913 Bacteria 312795
97 Ga0207671_10004327 3300025914 Bacteria 13642
98 Ga0207663_10078153 3300025916 Bacteria 2156
99 Ga0207662_10052375 3300025918 Bacteria 2428
100 Ga0207652_10160021 3300025921 Bacteria 2018
101 Ga0207646_10044321 3300025922 Bacteria 3993
102 Ga0207694_10000013 3300025924 Bacteria 384823
103 Ga0207694_10002278 3300025924 Bacteria 15703
104 Ga0207659_10019147 3300025926 Bacteria 4499
105 Ga0207687_10019348 3300025927 Bacteria 4511
106 Ga0207664_10000022 3300025929 Bacteria 215712
107 Ga0207706_10000741 3300025933 Bacteria 34035
108 Ga0207706_10014407 3300025933 Bacteria 7166
109 Ga0207670_10044318 3300025936 Bacteria 2943
110 Ga0207665_10196100 3300025939 Bacteria 1469
111 Ga0207661_10029962 3300025944 Bacteria 4185
112 Ga0207667_10002709 3300025949 Bacteria 21910
113 Ga0207677_10095292 3300026023 Bacteria 2175
114 Ga0207703_10002001 3300026035 Bacteria 17985
115 Ga0207703_10002621 3300026035 Bacteria 15520
116 Ga0207678_10005577 3300026067 Bacteria 11248
117 Ga0207708_10039140 3300026075 Bacteria 3612
118 Ga0207702_10005429 3300026078 Bacteria 11159
119 Ga0207648_10025024 3300026089 Bacteria 5321
120 Ga0207676_10087406 3300026095 Bacteria 2549
121 Ga0207674_10230032 3300026116 Bacteria 1802
122 Ga0207675_100133392 3300026118 Bacteria 2355
123 Ga0207698_10131332 3300026142 Unclassified 2141
124 Ga0209983_1010160 3300027665 Bacteria 1922
125 Ga0268266_10000579 3300028379 Bacteria 50615
126 Ga0268265_10164556 3300028380 Bacteria 1889
127 Ga0265323_10000005 3300028653 Bacteria 196003
128 Ga0265323_10001767 3300028653 Bacteria 10266
129 Ga0265323_10010696 3300028653 Bacteria 3713
130 Ga0265323_10020236 3300028653 Bacteria 2564
131 Ga0265322_10000397 3300028654 Bacteria 17983
132 Ga0265338_10034074 3300028800 Bacteria 4930
133 Ga0311004_159881 3300029276 Bacteria 4813
134 Ga0265760_10021841 3300031090 Bacteria 1853
135 Ga0265330_10013421 3300031235 Bacteria 3818
136 Ga0265330_10045202 3300031235 Bacteria 1942
137 Ga0265325_10000103 3300031241 Bacteria 59918
138 Ga0265339_10007323 3300031249 Bacteria 7147
139 Ga0265331_10000817 3300031250 Bacteria 25705
140 Ga0265327_10003431 3300031251 Bacteria 15137
141 Ga0265327_10004230 3300031251 Bacteria 12886
142 Ga0265316_10002837 3300031344 Bacteria 17728
143 Ga0265316_10027143 3300031344 Bacteria 4747
144 Ga0265316_10121630 3300031344 Bacteria 1971
145 Ga0265313_10003607 3300031595 Bacteria 12431
146 Ga0316579_10003358 3300031691 Bacteria 6225
147 Ga0316579_10048401 3300031691 Bacteria 1986
148 Ga0265314_10000383 3300031711 Bacteria 60688
149 Ga0265342_10006216 3300031712 Bacteria 8927
150 Ga0265342_10016594 3300031712 Bacteria 4806
151 Ga0316576_10078914 3300031727 Bacteria 2440
152 Ga0316576_10083942 3300031727 Bacteria 2367
153 Ga0316578_10000509 3300031728 Bacteria 13193
154 Ga0316577_10024698 3300031733 Bacteria 3342
155 Ga0316583_10000098 3300032133 Bacteria 19430
156 Ga0316593_10000356 3300032168 Bacteria 8042
157 Ga0316593_10003572 3300032168 Bacteria 3881
158 Ga0316593_10007719 3300032168 Bacteria 2964
159 Ga0316596_1011597 3300033541 Bacteria 2156
160 Ga0373959_0000378 3300034820 Bacteria 8812
161 Ga0316584_0003089 3300036712 Bacteria 10736
162 Ga0316584_0028942 3300036712 Bacteria 4089
163 Ga0316584_0084938 3300036712 Bacteria 2370
164 Ga0316584_0100730 3300036712 Bacteria 2163
165 Ga0316584_0138636 3300036712 Bacteria 1815
166 Ga0395900_0035068 3300037418 Bacteria 5168
167 Ga0395905_0025757 3300037471 Bacteria 5545
168 Ga0395905_0217244 3300037471 Bacteria 1790
169 Ga0316581_0000712 3300037588 Bacteria 6805
170 Ga0436364_0762505 3300037853 Bacteria 6615
171 Ga0436360_1000135 3300039438 Bacteria 3175
172 Ga0436361_0393709 3300039447 Bacteria 6331
173 Ga0436362_0523530 3300039453 Bacteria 8680
174 Ga0451577_0003000 3300042876 Bacteria 19232
175 Ga0451577_0232770 3300042876 Bacteria 1666
176 Ga0466961_0014731 3300044693 Bacteria 5025
177 Ga0453684_0000001 3300044712 Bacteria 2623166
178 Ga0495653_0006990 3300046463 Bacteria 9263
179 Ga0495582_0010483 3300046473 Bacteria 5098
180 Ga0495582_0078664 3300046473 Bacteria 1830
181 Ga0495628_0011552 3300046516 Bacteria 7466
182 Ga0495628_0043701 3300046516 Bacteria 3567
183 Ga0495643_0000003 3300046522 Bacteria 571962
184 Ga0495643_0000624 3300046522 Bacteria 42142
185 Ga0495640_0044799 3300046533 Bacteria 3074
186 Ga0495634_0042602 3300046642 Bacteria 3079
187 Ga0495659_0001712 3300046664 Bacteria 7325
188 Ga0495658_0006202 3300046683 Bacteria 5871
189 Ga0495658_0023845 3300046683 Bacteria 3252
190 Ga0495613_0139800 3300046689 Bacteria 1731
191 Ga0495674_0069369 3300047319 Bacteria 3048
192 Ga0496102_0172536 3300048905 Bacteria 2036
193 Ga0496106_0005579 3300048909 Bacteria 9318
194 Ga0496108_0010342 3300048911 Bacteria 7576
195 Ga0496108_0084167 3300048911 Bacteria 2699
196 Ga0496109_0032900 3300048912 Bacteria 4664
197 Ga0496110_0028247 3300048913 Bacteria 4816
198 Ga0496111_0034363 3300048914 Bacteria 3620
199 Ga0496113_0069484 3300048916 Bacteria 2675
200 Ga0496114_0126144 3300048917 Bacteria 2207
201 Ga0496126_0208110 3300048929 Bacteria 1648
202 Ga0501031_0022940 3300049568 Bacteria 4071
203 Ga0501034_0095329 3300049571 Bacteria 2972
204 Ga0501034_0177016 3300049571 Bacteria 2099
205 Ga0501034_0203339 3300049571 Bacteria 1938
206 Ga0501046_0040472 3300049580 Bacteria 3724
207 Ga0501046_0109213 3300049580 Bacteria 2115
208 Ga0501048_0018672 3300049582 Bacteria 5098
209 Ga0501048_0199392 3300049582 Bacteria 1419
210 Ga0501069_0062641 3300049585 Bacteria 2077
211 Ga0501069_0143804 3300049585 Bacteria 1369
212 Ga0501071_0150244 3300049587 Bacteria 1737
213 Ga0501072_0114461 3300049588 Bacteria 2147
214 Ga0501074_0075009 3300049590 Bacteria 2428
215 Ga0501076_0025053 3300049592 Bacteria 4614
216 Ga0501076_0063081 3300049592 Bacteria 2952
217 Ga0501080_0040626 3300049742 Bacteria 4338
218 Ga0501080_0190746 3300049742 Bacteria 1883
219 Ga0501080_0245588 3300049742 Bacteria 1633
220 Ga0501083_0162636 3300049744 Bacteria 1460
221 Ga0501035_0076900 3300049822 Bacteria 2951
222 nmdc:mga03n38_30893_c1 3300050490 Bacteria 2256
223 nmdc:mga03n38_42883_c1 3300050490 Bacteria 1980
224 nmdc:mga06z11_102161_c1 3300050494 Bacteria 1575
225 nmdc:mga09592_175953_c1 3300050508 Bacteria 1851
226 nmdc:mga09592_88165_c1 3300050508 Bacteria 2650
227 nmdc:mga0qj67_37956_c1 3300050509 Bacteria 3777
228 nmdc:mga06r32_59346_c1 3300050510 Bacteria 3679
229 nmdc:mga08y16_41357_c1 3300050511 Bacteria 4828
230 nmdc:mga0n895_117617_c1 3300050512 Bacteria 2678
231 nmdc:mga0n895_20_c1 3300050512 Bacteria 94193
232 nmdc:mga0rr50_304_c1 3300050513 Bacteria 26740
233 nmdc:mga0rr50_5074_c1 3300050513 Bacteria 7807
234 nmdc:mga08x19_1127_c1 3300050514 Bacteria 16646
235 nmdc:mga0a205_117761_c1 3300050515 Bacteria 2555
236 nmdc:mga0a205_626_c1 3300050515 Bacteria 28071
237 Ga0495595_0037816 3300053084 Bacteria 2196
238 Ga0495619_0008221 3300053085 Bacteria 6600
239 Ga0500554_023354 3300053102 Bacteria 1738
240 Ga0500628_000506 3300053129 Bacteria 7265
241 Ga0500616_0006241 3300053153 Bacteria 7860
242 Ga0501084_0000084 3300054114 Bacteria 69258
243 Ga0501084_0026391 3300054114 Bacteria 4847
244 2687237717 2684623219 Bacteria 8442773
245 2688067340 2687453257 Bacteria 6784659
246 2788437795 2786546940 Bacteria 6396474
247 2889419384 2889415604 Bacteria 8048700
248 2920111397 2920107658 Bacteria 10042636
249 Ga0453684_0021189
250 SwRhRL2b_contig_101279
251 rootH2_10012998
252 rootH2_10187852
253 rootL2_10131673
254 Ga0065704_10084337
255 Ga0070658_10000785
256 Ga0070683_100098719
257 Ga0070682_100013747
258 Ga0068868_100129564
259 Ga0070660_100009829
260 Ga0070687_100000751
261 Ga0070671_100072920
262 Ga0070659_100002918
263 Ga0070714_100000015
264 Ga0070708_100001592
265 Ga0070708_100015529
266 Ga0070708_100035511
267 Ga0070708_100184161
268 Ga0070662_100000428
269 Ga0070662_100003271
270 Ga0068867_100030440
271 Ga0070707_100041397
272 Ga0070707_100104431
273 Ga0070707_100155708
274 Ga0070698_100024252
275 Ga0070684_100007908
276 Ga0070697_100172154
277 Ga0068853_100018447
278 Ga0068853_100059738
279 Ga0070672_100011470
280 Ga0070686_100000015
281 Ga0070695_100083873
282 Ga0070695_100096939
283 Ga0070696_100038311
284 Ga0070696_100134916
285 Ga0070693_100066228
286 Ga0070665_100000481
287 Ga0070665_100291854
288 Ga0068855_100002693
289 Ga0068854_100079088
290 Ga0068852_100042840
291 Ga0068852_100088145
292 Ga0068859_100050991
293 Ga0068864_100019341
294 Ga0068851_10012447
295 Ga0068870_10031101
296 Ga0068858_100005610
297 Ga0068858_100012244
298 Ga0068862_100165430
299 Ga0081455_10154300
300 Ga0070717_10000037
301 Ga0075365_10024789
302 Ga0075368_10062177
303 Ga0075363_100033580
304 Ga0075363_100038177
305 Ga0075367_10074049
306 Ga0075428_100135629
307 Ga0075430_100045002
308 Ga0075431_100111419
309 Ga0075433_10000162
310 Ga0075434_100001986
311 Ga0068865_100002387
312 Ga0075436_100005197
313 Ga0097620_100050993
314 Ga0075435_100000289
315 Ga0075435_100030355
316 Ga0105240_10000057
317 Ga0111539_10031237
318 Ga0111539_10271846
319 Ga0105245_10016779
320 Ga0114129_10035074
321 Ga0114129_10128775
322 Ga0114129_10198389
323 Ga0105243_10042883
324 Ga0105242_10271795
325 Ga0105248_10005785
326 Ga0105237_10006273
327 Ga0105237_10041664
328 Ga0105238_10000025
329 Ga0105238_10000667
330 Ga0105239_10195061
331 Ga0157374_10004213
332 Ga0163163_10115144
333 Ga0157380_10095907
334 Ga0157377_10053800
335 Ga0157379_10020228
336 Ga0157376_10005050
337 Ga0197907_10504693
338 Ga0213875_10039236
339 Ga0224712_10002562
340 Ga0207688_10053212
341 Ga0207699_10019324
342 Ga0207643_10065841
343 Ga0207705_10009842
344 Ga0207695_10000072
345 Ga0207671_10004327
346 Ga0207663_10078153
347 Ga0207662_10052375
348 Ga0207652_10160021
349 Ga0207646_10044321
350 Ga0207694_10000013
351 Ga0207694_10002278
352 Ga0207659_10019147
353 Ga0207687_10019348
354 Ga0207664_10000022
355 Ga0207706_10000741
356 Ga0207706_10014407
357 Ga0207670_10044318
358 Ga0207665_10196100
359 Ga0207661_10029962
360 Ga0207667_10002709
361 Ga0207677_10095292
362 Ga0207703_10002001
363 Ga0207703_10002621
364 Ga0207678_10005577
365 Ga0207708_10039140
366 Ga0207702_10005429
367 Ga0207648_10025024
368 Ga0207676_10087406
369 Ga0207674_10230032
370 Ga0207675_100133392
371 Ga0207698_10131332
372 Ga0209983_1010160
373 Ga0268266_10000579
374 Ga0268265_10164556
375 Ga0265323_10000005
376 Ga0265323_10001767
377 Ga0265323_10010696
378 Ga0265323_10020236
379 Ga0265322_10000397
380 Ga0265338_10034074
381 Ga0311004_159881
382 Ga0265760_10021841
383 Ga0265330_10013421
384 Ga0265330_10045202
385 Ga0265325_10000103
386 Ga0265339_10007323
387 Ga0265331_10000817
388 Ga0265327_10003431
389 Ga0265327_10004230
390 Ga0265316_10002837
391 Ga0265316_10027143
392 Ga0265316_10121630
393 Ga0265313_10003607
394 Ga0316579_10003358
395 Ga0316579_10048401
396 Ga0265314_10000383
397 Ga0265342_10006216
398 Ga0265342_10016594
399 Ga0316576_10078914
400 Ga0316576_10083942
401 Ga0316578_10000509
402 Ga0316577_10024698
403 Ga0316583_10000098
404 Ga0316593_10000356
405 Ga0316593_10003572
406 Ga0316593_10007719
407 Ga0316596_1011597
408 Ga0373959_0000378
409 Ga0316584_0003089
410 Ga0316584_0028942
411 Ga0316584_0084938
412 Ga0316584_0100730
413 Ga0316584_0138636
414 Ga0395900_0035068
415 Ga0395905_0025757
416 Ga0395905_0217244
417 Ga0316581_0000712
418 Ga0436364_0762505
419 Ga0436360_1000135
420 Ga0436361_0393709
421 Ga0436362_0523530
422 Ga0451577_0003000
423 Ga0451577_0232770
424 Ga0466961_0014731
425 Ga0453684_0000001
426 Ga0495653_0006990
427 Ga0495582_0010483
428 Ga0495582_0078664
429 Ga0495628_0011552
430 Ga0495628_0043701
431 Ga0495643_0000003
432 Ga0495643_0000624
433 Ga0495640_0044799
434 Ga0495634_0042602
435 Ga0495659_0001712
436 Ga0495658_0006202
437 Ga0495658_0023845
438 Ga0495613_0139800
439 Ga0495674_0069369
440 Ga0496102_0172536
441 Ga0496106_0005579
442 Ga0496108_0010342
443 Ga0496108_0084167
444 Ga0496109_0032900
445 Ga0496110_0028247
446 Ga0496111_0034363
447 Ga0496113_0069484
448 Ga0496114_0126144
449 Ga0496126_0208110
450 Ga0501031_0022940
451 Ga0501034_0095329
452 Ga0501034_0177016
453 Ga0501034_0203339
454 Ga0501046_0040472
455 Ga0501046_0109213
456 Ga0501048_0018672
457 Ga0501048_0199392
458 Ga0501069_0062641
459 Ga0501069_0143804
460 Ga0501071_0150244
461 Ga0501072_0114461
462 Ga0501074_0075009
463 Ga0501076_0025053
464 Ga0501076_0063081
465 Ga0501080_0040626
466 Ga0501080_0190746
467 Ga0501080_0245588
468 Ga0501083_0162636
469 Ga0501035_0076900
470 nmdc:mga03n38_30893_c1
471 nmdc:mga03n38_42883_c1
472 nmdc:mga06z11_102161_c1
473 nmdc:mga09592_175953_c1
474 nmdc:mga09592_88165_c1
475 nmdc:mga0qj67_37956_c1
476 nmdc:mga06r32_59346_c1
477 nmdc:mga08y16_41357_c1
478 nmdc:mga0n895_117617_c1
479 nmdc:mga0n895_20_c1
480 nmdc:mga0rr50_304_c1
481 nmdc:mga0rr50_5074_c1
482 nmdc:mga08x19_1127_c1
483 nmdc:mga0a205_117761_c1
484 nmdc:mga0a205_626_c1
485 Ga0495595_0037816
486 Ga0495619_0008221
487 Ga0500554_023354
488 Ga0500628_000506
489 Ga0500616_0006241
490 Ga0501084_0000084
491 Ga0501084_0026391
492 2687237717
493 2688067340
494 2788437795
495 2889419384
496 2920111397

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01458

SUFBD

SUF system FeS cluster assembly, SufBD

237

463

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
4dn7-assembly1.cif.gz_B crystal structure of putative abc transporter, atp-binding protein from methanosarcina mazei go1 0.9281 88 431
5awg-assembly2.cif.gz_F crystal structure of hg-bound sufb-sufc-sufd complex from escherichia coli 0.8776 45 433
5awf-assembly1.cif.gz_B crystal structure of sufb-sufc-sufd complex from escherichia coli 0.8747 13 435
5awg-assembly2.cif.gz_F crystal structure of hg-bound sufb-sufc-sufd complex from escherichia coli 0.8658 45 433
5awf-assembly1.cif.gz_B crystal structure of sufb-sufc-sufd complex from escherichia coli 0.8606 13 435
ID Description Score Start End Superfamily
af_Q4CKB5_5_250_2.160.20.10 Mainly Beta;3 Solenoid;Pectate Lyase C-like;Single-stranded right-handed beta-helix, Pectin lyase-like 0.413 165 378 2.160.20.10
af_Q4CKM8_8_274_2.160.20.10 Mainly Beta;3 Solenoid;Pectate Lyase C-like;Single-stranded right-handed beta-helix, Pectin lyase-like 0.4055 158 356 2.160.20.10
af_Q4CLR5_6_301_2.160.20.10 Mainly Beta;3 Solenoid;Pectate Lyase C-like;Single-stranded right-handed beta-helix, Pectin lyase-like 0.3438 158 378 2.160.20.10
af_Q4CKB5_5_250_2.160.20.10 Mainly Beta;3 Solenoid;Pectate Lyase C-like;Single-stranded right-handed beta-helix, Pectin lyase-like 0.3435 165 378 2.160.20.10
af_Q4CKM8_8_274_2.160.20.10 Mainly Beta;3 Solenoid;Pectate Lyase C-like;Single-stranded right-handed beta-helix, Pectin lyase-like 0.3237 158 356 2.160.20.10
ID Description Score Start End GO Terms
AF-A0A836RJT2-F1-model_v4 Fe-S cluster assembly protein SufD 0.9907 1 438 GO:0016226
AF-A0A7W0RQ17-F1-model_v4 Fe-S cluster assembly protein SufD 0.9895 10 435 GO:0016226
AF-A0A3L7V889-F1-model_v4 deleted 0.9888 187 434
AF-A0A538SDK8-F1-model_v4 Fe-S cluster assembly protein SufD 0.9886 142 435 GO:0016226
AF-A0A3D4A4F1-F1-model_v4 Fe-S cluster assembly protein SufD 0.9883 125 434 GO:0016226

Map